upf0258 protein kiaa1024-like isoform x2, maker-scaffold1253_size52701-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Nameupf0258 protein kiaa1024-like isoform x2
Unique Namemaker-scaffold1253_size52701-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003971 (supercontig:LSalAtl2s:LSalAtl2s2131:3862:6024:1 gene:EMLSAG00000003971 transcript:EMLSAT00000003971 description:"maker-LSalAtl2s2131-augustus-gene-0.6")

HSP 1 Score: 84.7297 bits (208), Expect = 2.694e-19
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTE-IVRNAGKLLAEALAKMDNEGTLPKQAWNC 138
            LR  G  L +  A  RL+KMRP  +NY++WG T+     Y +A   ++LK D  W  V  DF+Y+DF +  +LN   F    D   CC + + +G  C C K    + E +      ++ EA+++ D +   P  +W+C
Sbjct:  107 LRTTGTDLTNPNAALRLQKMRPSSTNYISWGKTSXXVDIYRRASXANILKNDVTWVFVHTDFDYDDFNQTELLNMVRFFTF-DKNTCCGLADEEG--CSCKKWTKGADEYLAHTFFDIIVEAVSQTDKKIVPP--SWDC 240          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|478733528|gb|AGJ51189.1| (olfactory ionotropic receptor IR8a [Panulirus argus])

HSP 1 Score: 79.337 bits (194), Expect = 1.764e-13
Identity = 60/222 (27.03%), Postives = 99/222 (44.59%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            +R+I     D+     LKKMRP PS YV  G+T  +   + KA   +L+ RD+RWTLV  D   ++F ++M+   T    M   Q  C  +  +  NCDC  +  +  E+  NA  +LA  L   D +          + PS+       +F  A+ T +N  S+   + + +   +  Q      + N T    VG W   ++    P Y+   I+ +F++
Sbjct:  159 VRVIVISGIDATLTHTLKKMRPSPSYYVILGATDELNTLFSKAVRNNLVTRDSRWTLVATDHKSDEFDRDMLTESTGVTLMTPAQEVCCTVRNRNTNCDCDTLM-IPRELTVNAMLMLARVLKANDQQNGGGDGG---DQPST------TSFYSALRTELN--SWQNMKWEQDTLQMVPQFMFDITAINSTDTSAVGSWTTADKLRLNPEYEHSPIRRFFKI 368          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1000736154|ref|XP_015590562.1| (PREDICTED: glutamate receptor ionotropic, kainate 1 [Cephus cinctus])

HSP 1 Score: 78.5666 bits (192), Expect = 3.896e-13
Identity = 61/215 (28.37%), Postives = 100/215 (46.51%), Query Frame = 0
Query:   16 RLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDF---PKEMILNQT-NFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGT-LPKQAWNCEDPSSG---NNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            + + MRP PS YV + ST+N+   ++ A    ++KR+  W LVF D NYE+F     ++ LN T + L ME D  C LI     + C C           R+   L+     +M   G+ +  ++ +CE+ +S    NN+T E F+  V   +N    LF     ++ LIT +  +  ++     + +  DW+   +    P    E  K +FRV
Sbjct:  176 KFRNMRPSPSYYVIYASTSNMENYFQMALDGGIVKRNGVWILVFTDNNYENFRYISNDLKLNVTISILSMEVDGCCRLIGE---SRCTCPNDFQPFPHYFRHLISLIINITNEMQLLGSNVEPKSGHCENKNSTITRNNSTMELFNKNVIAKLNGNGTLFYIP--DIQLITYKAEMELQTYGNGSLEKFADWNIEKKVTTLPGKTIEPAKRFFRV 385          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|558605797|gb|AHA80144.1| (ionotropic receptor 8a [Schistocerca gregaria])

HSP 1 Score: 77.411 bits (189), Expect = 8.096e-13
Identity = 69/254 (27.17%), Postives = 114/254 (44.88%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGT----LPKQ-----------------------AWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDK-----HNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LR+I  +  ++E  +RLK MRP  S +V +  TA++ + Y KA +  L+++  RWTLVF D+ +  F +E +   T  LQM+   +CC +     A C C+ +  V+   +R A   + EAL ++ ++G     +PKQ                       A +  +P        +AF  A+       S LF R +      N PL   Q+R+  +SE     + +G+W          N + +  K +FRV
Sbjct:  164 LRVIALNGLETETVNRLKDMRPVASYFVIFADTAHMSELYSKATAGGLVRKAERWTLVFTDWEWRSFGREHLNLSTALLQMK-PASCCALQGEPDA-CRCT-LRKVAPAYLRAALSAVVEALTELHSKGLEVRPVPKQCSAADAGSPSDDEGGGGGGGGVDAEDATEPPPNATGNYDAFLRAIAPRGQTNSTLFFRMQAAQLTFNTPL---QLRMVNRSEE----IDLGNWSAEKGL--QLNTQLKPAKRFFRV 405          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|936699907|ref|XP_014227924.1| (ionotropic receptor 25a [Trichogramma pretiosum])

HSP 1 Score: 76.6406 bits (187), Expect = 1.464e-12
Identity = 58/229 (25.33%), Postives = 101/229 (44.10%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDF----PKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPK-QAWNC--EDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            +R++      S+  +R+  MRP PS YV + ST  +   ++ A    L++RD  W LVF D N+ +F        +    N   M++D  C LI +   + C+C     +     R    L+ E L++M +   L + Q   C   + SS  N T   FD  + + +         ++  +    A++ I+  S+ +  +VQ G W+  +R     N   +  + YFRV
Sbjct:  164 IRLVVIDYLSSQTVERIGNMRPLPSYYVIYASTKQMEVLFKTAVDGGLVRRDNTWYLVFTDNNWPEFSYFQSNAQLKVAVNVFTMKEDVCCHLIYS--SSPCNCPPDFKIFDHYFRRLVNLIVETLSEMQSANQLQEPQTGQCNSRNASSPGNGTNVEFDKRLLSKITKNDTFEYEEQRTMIAYKAEIEIKVLSQGQ--LVQNGTWNRESRIQPLANRTLQAARRYFRV 388          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1339080907|ref|XP_023701447.1| (glutamate receptor ionotropic, kainate 5-like isoform X2 [Cryptotermes secundus])

HSP 1 Score: 76.2554 bits (186), Expect = 2.161e-12
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   15 DRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEG---TLPKQAW--NCE--DPSSGNNATREAF 152
            DRL  MRP PS +V +G T NV K ++KA+   L+ R  RW LVF DF Y++F +  +    + + ++ D  C L+   KG  C C    ++    ++     L + L +M   G   + P   W  +C+  D  + +N TR+ F
Sbjct:  170 DRLLAMRPVPSYFVIFGDTENVIKLFKKAQDGKLVTRSERWNLVFTDFLYDNFKQSSLNTLVSLITLDKDICCRLLDQDKG--CACPDKFEILPVYMKEVIMFLGDLLVEMKKSGSDLSRPAGEWGADCQNVDAKTADNTTRDKF 312          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1339080905|ref|XP_023701446.1| (glutamate receptor ionotropic, kainate 3-like isoform X1 [Cryptotermes secundus] >gi|1330926871|gb|PNF39889.1| hypothetical protein B7P43_G01962 [Cryptotermes secundus])

HSP 1 Score: 76.2554 bits (186), Expect = 2.221e-12
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   15 DRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEG---TLPKQAW--NCE--DPSSGNNATREAF 152
            DRL  MRP PS +V +G T NV K ++KA+   L+ R  RW LVF DF Y++F +  +    + + ++ D  C L+   KG  C C    ++    ++     L + L +M   G   + P   W  +C+  D  + +N TR+ F
Sbjct:  170 DRLLAMRPVPSYFVIFGDTENVIKLFKKAQDGKLVTRSERWNLVFTDFLYDNFKQSSLNTLVSLITLDKDICCRLLDQDKG--CACPDKFEILPVYMKEVIMFLGDLLVEMKKSGSDLSRPAGEWGADCQNVDAKTADNTTRDKF 312          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1330926873|gb|PNF39891.1| (hypothetical protein B7P43_G01962 [Cryptotermes secundus])

HSP 1 Score: 75.8702 bits (185), Expect = 2.385e-12
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   15 DRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEG---TLPKQAW--NCE--DPSSGNNATREAF 152
            DRL  MRP PS +V +G T NV K ++KA+   L+ R  RW LVF DF Y++F +  +    + + ++ D  C L+   KG  C C    ++    ++     L + L +M   G   + P   W  +C+  D  + +N TR+ F
Sbjct:  170 DRLLAMRPVPSYFVIFGDTENVIKLFKKAQDGKLVTRSERWNLVFTDFLYDNFKQSSLNTLVSLITLDKDICCRLLDQDKG--CACPDKFEILPVYMKEVIMFLGDLLVEMKKSGSDLSRPAGEWGADCQNVDAKTADNTTRDKF 312          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1330926872|gb|PNF39890.1| (hypothetical protein B7P43_G01962 [Cryptotermes secundus] >gi|1330926874|gb|PNF39892.1| hypothetical protein B7P43_G01962 [Cryptotermes secundus])

HSP 1 Score: 75.8702 bits (185), Expect = 2.398e-12
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   15 DRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEG---TLPKQAW--NCE--DPSSGNNATREAF 152
            DRL  MRP PS +V +G T NV K ++KA+   L+ R  RW LVF DF Y++F +  +    + + ++ D  C L+   KG  C C    ++    ++     L + L +M   G   + P   W  +C+  D  + +N TR+ F
Sbjct:  170 DRLLAMRPVPSYFVIFGDTENVIKLFKKAQDGKLVTRSERWNLVFTDFLYDNFKQSSLNTLVSLITLDKDICCRLLDQDKG--CACPDKFEILPVYMKEVIMFLGDLLVEMKKSGSDLSRPAGEWGADCQNVDAKTADNTTRDKF 312          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|746873854|gb|AJD81626.1| (ionotropic receptor 8a, partial [Helicoverpa assulta])

HSP 1 Score: 75.0998 bits (183), Expect = 3.440e-12
Identity = 55/207 (26.57%), Postives = 89/207 (43.00%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATRE-AFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS YV  G    +   Y +A    L++RD RW L+  D++  +  +  ++  T  LQ  D   CC +  MK  +C C         I+    + +AE  +K+D +  +   + NCE+P +  N+TR+  F      T  +   LF  D     L      I +  +   G   +  W     +   P  + E +K +FR+
Sbjct:  142 LKTMRPEPSFYVIVGENGFIMDTYRRAVKEKLVRRDFRWNLILTDYSTLELSQ--LVLPTVILQ-ADPGECCKL--MKREDCSCPADFQRKQYILNALIQYIAEVYSKLDRDLPMVTTSINCEEPEATMNSTRDRLFRQFAEDTEISNETLFYWDMDRSGLFLRSRFILSTYKPTAGQQTIATWSADEEYKLLPGVELEPLKMFFRI 343          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1002047790|gb|AMM70666.1| (ionotropic receptor 8a [Heliconius melpomene rosina])

HSP 1 Score: 73.9442 bits (180), Expect = 1.288e-11
Identity = 51/206 (24.76%), Postives = 93/206 (45.15%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS YV  G    V   Y++A    L+KR  RW L+  D+   D P  ++L     +   D  +CC ++  K   C C+        I+ N  K +AE+L+++D++  +     +C++     NAT+E           +   LF  D+    +      + +  + ++G+ ++  W   + +   P    E +K++FR+
Sbjct:  172 LKNMRPEPSFYVIVGDNNFVTSTYKRAVKEKLVKRPYRWNLIITDYKTLD-PSILVLPAV--VLQSDKADCCKLLATK--ECSCAADMQKKQHILNNLIKYMAESLSRIDSDQIV---NIDCDNQQGQMNATKEKLYQIFDEDSLSNETLFYWDEERSGIYHRSHFVLSTYKPESGLQRIASWSADDEYKLLPGVTLEPLKNFFRI 369          
The following BLAST results are available for this feature:
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000039712.694e-1932.37supercontig:LSalAtl2s:LSalAtl2s2131:3862:6024:1 ge... [more]
back to top
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|478733528|gb|AGJ51189.1|1.764e-1327.03olfactory ionotropic receptor IR8a [Panulirus argu... [more]
gi|1000736154|ref|XP_015590562.1|3.896e-1328.37PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|558605797|gb|AHA80144.1|8.096e-1327.17ionotropic receptor 8a [Schistocerca gregaria][more]
gi|936699907|ref|XP_014227924.1|1.464e-1225.33ionotropic receptor 25a [Trichogramma pretiosum][more]
gi|1339080907|ref|XP_023701447.1|2.161e-1231.72glutamate receptor ionotropic, kainate 5-like isof... [more]
gi|1339080905|ref|XP_023701446.1|2.221e-1231.72glutamate receptor ionotropic, kainate 3-like isof... [more]
gi|1330926873|gb|PNF39891.1|2.385e-1231.72hypothetical protein B7P43_G01962 [Cryptotermes se... [more]
gi|1330926872|gb|PNF39890.1|2.398e-1231.72hypothetical protein B7P43_G01962 [Cryptotermes se... [more]
gi|746873854|gb|AJD81626.1|3.440e-1226.57ionotropic receptor 8a, partial [Helicoverpa assul... [more]
gi|1002047790|gb|AMM70666.1|1.288e-1124.76ionotropic receptor 8a [Heliconius melpomene rosin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1253_size52701supercontigscaffold1253_size52701:39211..39957 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1253_size52701-snap-gene-0.9-mRNA-1maker-scaffold1253_size52701-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1253_size52701:39211..39957+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1253_size52701-snap-gene-0.9 ID=maker-scaffold1253_size52701-snap-gene-0.9|Name=upf0258 protein kiaa1024-like isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=747bp|location=Sequence derived from alignment at scaffold1253_size52701:39211..39957+ (Tigriopus kingsejongensis)
GCAACTCCTTCCTGAGGATCATTGGGGCGCACTTGAATGACTCTGAGGCC TTTGACCGCTTGAAGAAGATGAGACCCAGACCATCCAACTATGTGGCCTG GGGATCCACGGCTAATGTGAGGAAGGCTTACGAAAAGGCCAGGAGTATGG ACCTTCTCAAGCGCGACACCCGCTGGACTCTAGTCTTTGAGGACTTCAAC TACGAGGACTTCCCCAAGGAGATGATCCTCAACCAGACCAATTTCTTACA AATGGAGGACGACCAGAACTGTTGCCTTATTATGAACATGAAAGGCGCAA GTAGGATTCCGAGCATCTTGGTCTTCTTAACCAGTCTATCTAACCGCATG GTTGTGTCTTTTCCTTTCAGACTGCGATTGCTCCAAGATGGGGGATGTTT CAACCGAGATTGTAAGGAATGCCGGGAAGCTCTTGGCCGAAGCCTTGGCC AAGATGGACAATGAGGGCACCCTACCCAAGCAGGCTTGGAACTGTGAGGA TCCATCGAGTGGGAACAACGCCACGAGGGAGGCCTTCGACCTGGCCGTAG GCACCACGGTCAATGCCACTTCCTATCTTTTCAAGAGGGACAAGCATAAT GTTCCGCTCATCACCGCCCAAGTTCGGATCCGGGCCAAGTCCGAAAACAA AACGGGAATCGTGCAGGTTGGAGACTGGGATCCAGTCAACCGCTTCGTCA ACGCTCCCAACTACAAGGCCGAGAACATCAAGGACTACTTCAGAGTT
back to top
Synonyms
The feature 'upf0258 protein kiaa1024-like isoform x2' has the following synonyms
Synonym
Tk01372
Add to Basket