GI13202, maker-scaffold1346_size46090-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
NameGI13202
Unique Namemaker-scaffold1346_size46090-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of GI13202 vs. L. salmonis genes
Match: EMLSAG00000009844 (supercontig:LSalAtl2s:LSalAtl2s63:310844:311707:-1 gene:EMLSAG00000009844 transcript:EMLSAT00000009844 description:"maker-LSalAtl2s63-augustus-gene-3.13")

HSP 1 Score: 140.969 bits (354), Expect = 2.126e-41
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
Query:  166 RRREGGGGG-GFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            R+ +GGGG  GF KPL LS DLA IVG++ APRHEVVKQVWAYIK + LQDPKNKQFA CD+KL KVIG+ KF+CFGMAK+LK HMS
Sbjct:  157 RKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVIGETKFKCFGMAKYLKSHMS 243          
BLAST of GI13202 vs. L. salmonis genes
Match: EMLSAG00000001079 (supercontig:LSalAtl2s:LSalAtl2s117:677548:677954:-1 gene:EMLSAG00000001079 transcript:EMLSAT00000001079 description:"maker-LSalAtl2s117-augustus-gene-7.31")

HSP 1 Score: 95.9005 bits (237), Expect = 7.281e-26
Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 0
Query:  173 GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            G G  K +KLS +LA +VG++ A R E +K +WAY+K HNLQDP+NKQ+   D K+ K+ G+ + R FGMAKFLK+H+S
Sbjct:    4 GSGLTKTMKLSNELAXVVGKKEASRAECIKLLWAYLKKHNLQDPENKQYFTPDKKMAKIFGEDRIRAFGMAKFLKEHLS 82          
BLAST of GI13202 vs. L. salmonis genes
Match: EMLSAG00000002923 (supercontig:LSalAtl2s:LSalAtl2s1687:28882:29139:-1 gene:EMLSAG00000002923 transcript:EMLSAT00000002923 description:"augustus_masked-LSalAtl2s1687-processed-gene-0.0")

HSP 1 Score: 93.5893 bits (231), Expect = 6.274e-25
Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 0
Query:  173 GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            G G  K +KLS +LA +VG++ A R E +K +WAY+K HNLQDP+NKQ+   D K+ K+ G  + R FGMAKFLK+H+S
Sbjct:    4 GSGLTKTMKLSNELADVVGKKEASRAECIKLLWAYLKKHNLQDPENKQYFTPDKKMAKIFGADRIRAFGMAKFLKEHIS 82          
BLAST of GI13202 vs. L. salmonis genes
Match: EMLSAG00000008620 (supercontig:LSalAtl2s:LSalAtl2s530:741339:741623:1 gene:EMLSAG00000008620 transcript:EMLSAT00000008620 description:"augustus_masked-LSalAtl2s530-processed-gene-7.4")

HSP 1 Score: 56.6102 bits (135), Expect = 6.446e-11
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  197 RHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            R + +  +W Y+K H+LQ+  NKQF   D K+ K++G+ + R FG+ K LKDH+
Sbjct:   39 RAKCIYLLWVYLKNHHLQELTNKQFFTIDKKMAKILGKDRIRSFGINKVLKDHL 92          
BLAST of GI13202 vs. L. salmonis genes
Match: EMLSAG00000005264 (supercontig:LSalAtl2s:LSalAtl2s2815:1325:3174:1 gene:EMLSAG00000005264 transcript:EMLSAT00000005264 description:"maker-LSalAtl2s2815-augustus-gene-0.2")

HSP 1 Score: 52.7582 bits (125), Expect = 2.981e-8
Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 0
Query:  181 KLSEDLAAIVG-QESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMSPLD 254
            +LS  L+++ G      R +VV++VW YIK  NLQD   K   KCDDKL ++  + +F    + + L  HM  L+
Sbjct:  323 RLSPTLSSLCGGVRKLSRRDVVRKVWVYIKKRNLQDSNRKHIVKCDDKLRELSNEDEFDYRRLFRHLDSHMFGLE 397          
BLAST of GI13202 vs. SwissProt
Match: gi|74626867|sp|O74503.1|UAF30_SCHPO (RecName: Full=Upstream activation factor subunit spp27; AltName: Full=Upstream activation factor 27 KDa subunit; Short=p27; AltName: Full=Upstream activation factor 30 KDa subunit; Short=p30; AltName: Full=Upstream activation factor subunit uaf30)

HSP 1 Score: 86.2705 bits (212), Expect = 4.308e-19
Identity = 70/244 (28.69%), Postives = 107/244 (43.85%), Query Frame = 0
Query:    8 ELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            E +  ++ IL   D +T S K+VR  LE   K DL+  K+++N +I +                 DE AA     P+E                        K +  K APA K         K   A ++  ++G++ ++  R R+R+     G + +R +        KP+KLS  LA  +G E   R + VK++W YIK H+LQDP +K+   CDDKL  V        F M K+L + M+
Sbjct:    3 EYETDIKQILGTVDRQTVSAKQVRQLLEERRKVDLSAHKKDLNALILKCF---------------DETAA-----PSE------------------------KESLEKQAPARKT--------KGKRATENGTEEGKKPAK--RTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYLTNLMT 192          
BLAST of GI13202 vs. SwissProt
Match: gi|74645010|sp|Q08747.1|UAF30_YEAST (RecName: Full=Upstream activation factor subunit UAF30; AltName: Full=Upstream activation factor 30 KDa subunit; Short=p30)

HSP 1 Score: 73.1738 bits (178), Expect = 2.655e-14
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0
Query:  180 LKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            + LS+ LA+++G+    R EVV+++WAYIK HNLQ+P NK+   CD+KL  ++G K    F M K L  HM+
Sbjct:  124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASHMT 194          
BLAST of GI13202 vs. SwissProt
Match: gi|2497196|sp|Q05024.1|TRI1_YEAST (RecName: Full=Protein TRI1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.221e-11
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  182 LSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            LS  L   +G E  PR +VVK +W YIK H+LQ+PK+++   CD+K+  + G KK   F M K L  H+
Sbjct:  126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHL 193          
BLAST of GI13202 vs. SwissProt
Match: gi|73622093|sp|Q9FMT4.1|SNF12_ARATH (RecName: Full=SWI/SNF complex component SNF12 homolog)

HSP 1 Score: 55.8398 bits (133), Expect = 8.917e-8
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 0
Query:  180 LKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMSP 252
             KLS  L  ++G E   R  ++  +W Y+K   LQ+P +  F  CD  L KV G++K +   +++ +  H+SP
Sbjct:  319 FKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSP 391          
BLAST of GI13202 vs. nr
Match: gi|1314955066|ref|XP_023178763.1| (upstream activation factor subunit spp27 [Drosophila hydei])

HSP 1 Score: 150.984 bits (380), Expect = 3.746e-41
Identity = 99/255 (38.82%), Postives = 145/255 (56.86%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDE---EAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGG--GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E  L   L +RK+E +KI+ EV+NE   ED++ D D+  +   E ADD E   E EV  +      K  AP  + QP K   +            A   + +L  D +G +    S +D +  ++ A  +        G G    GF +   LS +L+A++G +S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  K+FR FGM K LK H 
Sbjct:    1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVEGKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKHKVS------------AKKKRKSLNADDSGTESDAGSDSDYEVVKKPAPKKKAAKTAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243          
BLAST of GI13202 vs. nr
Match: gi|195126905|ref|XP_002007909.1| (uncharacterized protein Dmoj_GI13202 [Drosophila mojavensis] >gi|1060224376|ref|XP_017861502.1| PREDICTED: upstream activation factor subunit spp27 [Drosophila arizonae] >gi|193919518|gb|EDW18385.1| uncharacterized protein Dmoj_GI13202 [Drosophila mojavensis])

HSP 1 Score: 150.214 bits (378), Expect = 6.209e-41
Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDE---EAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGG--GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L   L +RK+E +KI+ EV+NE   ED++ D D+  +   E ADD E   E EV  +      K  AP  + QP K   +            A   + +L  D +G +    S +D +  ++ A  +        G G    GF +   LS +L+A++G +S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  K+FR FGM K LK H 
Sbjct:    1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKHKVS------------AKKKRKSLNADDSGTESDAGSDSDYEVVKKPAPKKKAAKSAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243          
BLAST of GI13202 vs. nr
Match: gi|1062666545|ref|XP_017956466.1| (PREDICTED: upstream activation factor subunit spp27 [Drosophila navojoa])

HSP 1 Score: 149.058 bits (375), Expect = 1.800e-40
Identity = 98/255 (38.43%), Postives = 145/255 (56.86%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDE---EAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGG--GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L   L +RK+E +KI+ EV+NE   ED++ D D+  +   E ADD E   E EV  +      K  AP  + QP K   +                + +L  D +G +    S +D +  ++ A  +        G G    GF +   LS +L+A++G +S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  K+FR FGM K LK H 
Sbjct:    1 MSDISSTQLRTEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEDDDDDDDDGKDPDAEPADDSEPSEEDEVASSSEEEKKKKPAPKKRPQPTKHKVS------------TKKKRKSLNADDSGTESDAGSDSDYEVVKKPAPKKKAAKSAGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 243          
BLAST of GI13202 vs. nr
Match: gi|195377146|ref|XP_002047353.1| (uncharacterized protein Dvir_GJ11979 [Drosophila virilis] >gi|194154511|gb|EDW69695.1| uncharacterized protein Dvir_GJ11979 [Drosophila virilis])

HSP 1 Score: 146.747 bits (369), Expect = 1.611e-39
Identity = 95/257 (36.96%), Postives = 143/257 (55.64%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEAD---GDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQ----RRRRRARGRGREGRRREGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+ ++L+ +++++LK+ADL T S K+VR Q+E+ L   L +RK+E +KI+ EV+NE   E+++ D   G + D E  DD +   E EV  +      K  AP  + QP K   +            A   + +L  D +G +    S +D +       ++   +        G    GF +   LS +L+A++G +S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  K+FR FGM K LK H 
Sbjct:    1 MSDISSTQLRSEIQSVLKDADLSTISAKRVREQVESKLNCSLLSRKKEFDKIVMEVINEQQEEEDDDDEDDGKDPDAEPQDDSDPSEEDEVASSSEEEKKKKPAPKKRPQPTKHKLS------------AKKKRKSLNADDSGTESDAGSDSDYEVVKKPAPKKKAAKSAGSGSGTGRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKVKRFRTFGMLKHLKPHF 245          
BLAST of GI13202 vs. nr
Match: gi|170058412|ref|XP_001864911.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167877491|gb|EDS40874.1| conserved hypothetical protein [Culex quinquefasciatus])

HSP 1 Score: 142.51 bits (358), Expect = 6.243e-38
Identity = 97/250 (38.80%), Postives = 144/250 (57.60%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            M E    EL++++  ILK+A+LE T+ KKVR+QLE +LK DL+ RK+E++ ++ E +N  D   EE + +E+ E+ ++ +E   E   KK K GA +K  AP +K +    +  ++         K        AK   G+  +  S +D     ++++      ++      G + +P  LS +LAAI G E+ PRHEVVK+VWA IK  NL DPKNKQ+A CD +L KVIG K+FR FGM K+LK H 
Sbjct:    1 MPEPTKDELRKEIATILKDANLEETAAKKVRLQLEDNLKCDLSQRKKEVDDLVMEYVNAQDESGEEEEQEEEAEDKSESEESEDEAPKKKGKRGAPAKRGAPASKKKKGSDSEEESEEEASDDDYKPTKGAKGSAKKGPGRKKKGGSDSDSDEDWKKSKPAKGAKKKGAAKSTG-YTRPYNLSPELAAICGAEALPRHEVVKKVWAIIKERNLYDPKNKQYAICDSELQKVIGVKRFRTFGMLKYLKPHF 249          
BLAST of GI13202 vs. nr
Match: gi|225713048|gb|ACO12370.1| (YMR233W [Lepeophtheirus salmonis])

HSP 1 Score: 140.969 bits (354), Expect = 1.991e-37
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0
Query:  166 RRREGGGGG-GFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            R+ +GGGG  GF KPL LS DLA IVG++ APRHEVVKQVWAYIK + LQDPKNKQFA CD+KL KVIG+ KF+CFGMAK+LK HMS
Sbjct:  157 RKSKGGGGNTGFTKPLNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVIGETKFKCFGMAKYLKSHMS 243          
BLAST of GI13202 vs. nr
Match: gi|1189083042|ref|XP_020809770.1| (upstream activation factor subunit spp27 [Drosophila serrata] >gi|1189083044|ref|XP_020809771.1| upstream activation factor subunit spp27 [Drosophila serrata])

HSP 1 Score: 139.428 bits (350), Expect = 9.449e-37
Identity = 94/262 (35.88%), Postives = 145/262 (55.34%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADGDEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLA--------KAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGGGG----GFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+  +L+R+++++LK+ADL T S K+VR Q+E  L   L  RK+E ++I+ +V+NE   E+++ + D  D +A  DDE     E  + +N ++S+ +A           + QP K          K  P K    +  L  D +G +    S +D +  ++ A  +  +       G      GF +   LS +L+A++G  S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  ++FR FGM K LK H 
Sbjct:    1 MSDISSEDLRREIQSVLKDADLSTISAKRVREQVEGKLNCSLLNRKKEFDRIVMDVINEQQDEEDDEEDDGKDPDADPDDES----ESSEVENMSSSEEEAQKQKKKPGPKKRTQPIKH---------KTGPKKK---RKTLNADDSGTESDAGSDSDYEVVKKPAAKKKAKSSGTTASGAARKSTGFTRAYNLSPELSALMGAPSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFRTFGMLKHLKPHF 246          
BLAST of GI13202 vs. nr
Match: gi|225709960|gb|ACO10826.1| (Upstream activation factor subunit UAF30 [Caligus rogercresseyi])

HSP 1 Score: 138.658 bits (348), Expect = 1.561e-36
Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
Query:  176 FIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHMS 251
            F KPL LSEDLAAIVG++ APRHEVVKQVWAYIK +NLQDP NKQFA CD+KL KVIG+KKF+CFGMAK+ K+HMS
Sbjct:  161 FTKPLNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVIGEKKFKCFGMAKYFKNHMS 236          
BLAST of GI13202 vs. nr
Match: gi|919063424|ref|XP_013413350.1| (upstream activation factor subunit spp27 [Lingula anatina])

HSP 1 Score: 138.272 bits (347), Expect = 4.631e-36
Identity = 87/259 (33.59%), Postives = 140/259 (54.05%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADG--------DEDDEEAADDDEEP-AEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGGGGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            M+E+  SEL+R +  ILK ADL + S+KKVR QLE   + DLT RK+EI++I+ +++      + + +         +   +E++ DDE P  EP  KK K   A+ A+     + P+K ++                    L ++ +   GRR      +R   +A+ +  E ++    G   + KP +LS DLAAIVG +  PR +VVK++W  +K   L+DPKN+QF  CD+++ K+ G+K+ R FGM K+L  H+
Sbjct:    1 MAEMNKSELRRSIGEILKGADLSSLSSKKVRKQLEEKYEVDLTERKKEIDEIVMDMITNSSQTESQTETEEEKVVEQNGTKQESSSDDEAPDPEPVAKKKK--TATPARKNTKPSTPSKNSSEDEDDDDDDDGVDDEKLAKKLQEEESA--GRRTRTRAVKRNPPKAKPKSTEKKKGSKPGQSRYSKPCQLSPDLAAIVGTDKLPRKDVVKRMWEIVKERKLEDPKNRQFMVCDEEMQKLFGRKRVRTFGMMKYLNTHI 255          
BLAST of GI13202 vs. nr
Match: gi|1013919781|ref|XP_016030110.1| (uncharacterized protein Dsimw501_GD13706 [Drosophila simulans] >gi|900899465|gb|KMY97193.1| uncharacterized protein Dsimw501_GD13706 [Drosophila simulans])

HSP 1 Score: 137.117 bits (344), Expect = 6.863e-36
Identity = 95/255 (37.25%), Postives = 141/255 (55.29%), Query Frame = 0
Query:    1 MSEIAGSELKRKVEAILKEADLETTSNKKVRMQLEADLKADLTTRKEEINKIIQEVMNEMDSEDEEADG---DEDDEEAADDDEEPAEPEVKKAKNGAASKAKAPLAKAQPAKAAAAKAAPATKAAPAKAAAAKAALAKDHAGQDGRRQSQTDRQRRRRRARGRGREGRRREGGG--GGGFIKPLKLSEDLAAIVGQESAPRHEVVKQVWAYIKLHNLQDPKNKQFAKCDDKLLKVIGQKKFRCFGMAKFLKDHM 250
            MS+I+  +L+R+++A+LK+ADL T S K+VR Q+E  L   L +RK+E +KI+ EV+NE   E++E D    D D +   + +    E      +  A  K ++P  + QP K  A K    T             L  D +G +    S +D +  ++    +  +     G G    GF +   LS +L+A++G+ S PRHEVVK+VWA IK  +L DPKNKQFA CDD+L+KV+  ++FR FGM K LK H 
Sbjct:    1 MSDISSEDLRREIQAVLKDADLATISAKRVREQVEGKLNCSLLSRKKEFDKIVMEVINEQQDEEDEDDDEGKDPDADPDDESEPSEEEDPSSSEEEAAKKKKQSPKKRPQPTKHKAPKKKRKT-------------LNADDSGTESDAGSDSDYEVVKKPVAKKKGKAAGGTGSGRKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFRTFGMLKHLKPHF 242          
The following BLAST results are available for this feature:
BLAST of GI13202 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAG000000098442.126e-4173.56supercontig:LSalAtl2s:LSalAtl2s63:310844:311707:-1... [more]
EMLSAG000000010797.281e-2653.16supercontig:LSalAtl2s:LSalAtl2s117:677548:677954:-... [more]
EMLSAG000000029236.274e-2553.16supercontig:LSalAtl2s:LSalAtl2s1687:28882:29139:-1... [more]
EMLSAG000000086206.446e-1142.59supercontig:LSalAtl2s:LSalAtl2s530:741339:741623:1... [more]
EMLSAG000000052642.981e-837.33supercontig:LSalAtl2s:LSalAtl2s2815:1325:3174:1 ge... [more]
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BLAST of GI13202 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|74626867|sp|O74503.1|UAF30_SCHPO4.308e-1928.69RecName: Full=Upstream activation factor subunit s... [more]
gi|74645010|sp|Q08747.1|UAF30_YEAST2.655e-1445.83RecName: Full=Upstream activation factor subunit U... [more]
gi|2497196|sp|Q05024.1|TRI1_YEAST1.221e-1143.48RecName: Full=Protein TRI1[more]
gi|73622093|sp|Q9FMT4.1|SNF12_ARATH8.917e-832.88RecName: Full=SWI/SNF complex component SNF12 homo... [more]
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BLAST of GI13202 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1314955066|ref|XP_023178763.1|3.746e-4138.82upstream activation factor subunit spp27 [Drosophi... [more]
gi|195126905|ref|XP_002007909.1|6.209e-4138.82uncharacterized protein Dmoj_GI13202 [Drosophila m... [more]
gi|1062666545|ref|XP_017956466.1|1.800e-4038.43PREDICTED: upstream activation factor subunit spp2... [more]
gi|195377146|ref|XP_002047353.1|1.611e-3936.96uncharacterized protein Dvir_GJ11979 [Drosophila v... [more]
gi|170058412|ref|XP_001864911.1|6.243e-3838.80conserved hypothetical protein [Culex quinquefasci... [more]
gi|225713048|gb|ACO12370.1|1.991e-3773.56YMR233W [Lepeophtheirus salmonis][more]
gi|1189083042|ref|XP_020809770.1|9.449e-3735.88upstream activation factor subunit spp27 [Drosophi... [more]
gi|225709960|gb|ACO10826.1|1.561e-3678.95Upstream activation factor subunit UAF30 [Caligus ... [more]
gi|919063424|ref|XP_013413350.1|4.631e-3633.59upstream activation factor subunit spp27 [Lingula ... [more]
gi|1013919781|ref|XP_016030110.1|6.863e-3637.25uncharacterized protein Dsimw501_GD13706 [Drosophi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1346_size46090supercontigscaffold1346_size46090:31949..33186 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1346_size46090-snap-gene-0.9-mRNA-1maker-scaffold1346_size46090-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1346_size46090:31949..33186+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1346_size46090-snap-gene-0.9 ID=maker-scaffold1346_size46090-snap-gene-0.9|Name=GI13202|organism=Tigriopus kingsejongensis|type=gene|length=1238bp|location=Sequence derived from alignment at scaffold1346_size46090:31949..33186+ (Tigriopus kingsejongensis)
GCTCAGCATCATGAGCGAGATCGCCGGCTCGGAGCTCAAGCGGAAGGTGG AGGCCATCCTCAAGGAGGCCGACCTCGAGACCACCTCCAACAAGAAGGTC CGCATGCAGTTGGAGGCTGACCTCAAGGCCGACCTGACCACGCGCAAGGA GGAGATCAACAAGATCATCCAGGAGGTCATGAACGAGATGGACTCCGAGG ACGAGGAGGCCGACGGGGACGAGGACGACGAGGAGGCCGCCGACGACGAC GAGGAGCCCGCCGAGCCCGAGGTCAAGAAAGCCAAGAATGGGGCCGCCAG CAAGGCCAAGGCTCCGCTGGCCAAGGCTCAGCCGGCCAAGGCTGCGGCGG CTAAGGCCGCCCCGGCCACCAAGGCTGCCCCGGCCAAGGCTGCGGCGGCC AAGGCCGCTCTGGCCAAGGACCACGCCGGCCAAGACGGCCGGCGCCAAAG CCAAACCGACCGACAGCGACGAAGACGACGAGCCCGAGGCCGAGGGCGAG AAGGCCGAAGACGAGAAGGTGGAGGACGAGGAGGCCGAGGAAGACGAGGC CCCCGCGGAGGATGAGGAGAGCGAGGATGACGCCCGCCCCAACCAGGGCC GGGGACGCAAGGCGGCTTCGCCTCAAAAGAAGGCCAAGGGCCAAGAGTCC GACGCCTCCTCCAACTTCTCGGACGAGTTGGCCTCCAATGCCGAGGAGAG CTCGGGCGAAGACTCGGGCTCGGACTACGAGCCCGACGGCATGATGCGGG CGGCCAAACGCCAGAGCAAGACCACGCCCAAGGGCGGCCGTGGGCGGGGC CGGGCCCGGGCCACCAAGCGCACCCGCGGCTCCGACGACTCCTCGGCCGA GAGCTCGGGCGAGGAGTGGGGCTCGCAGAAGAAGAAACGCGGCGGCGGAG GCGGCCGGAGTCGGGCCAAGGCCGCCTCGGGCTCGGACGACGACAGTGAG GGCGAGCCCAAGCCCAAGAAGAAGCGCGGAGGCGGCGGCGGGGGGGGCTT CATCAAGCCCTTGAAATTATCCGAGGACCTGGCCGCCATCGTGGGCCAGG AGTCCGCGCCCCGCCACGAAGTGGTCAAGCAGGTGTGGGCCTACATCAAG TTGCACAATCTCCAAGACCCCAAGAACAAGCAGTTCGCCAAGTGTGACGA CAAACTCCTGAAGGTCATCGGGCAGAAGAAGTTCCGATGCTTCGGCATGG CCAAGTTTCTCAAAGACCACATGTCGCCCTTAGACAAA
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Synonyms
The feature 'GI13202' has the following synonyms
Synonym
Tk10766
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