unnamed protein product, maker-scaffold1362_size45580-snap-gene-0.15 (gene) Tigriopus kingsejongensis

Overview
Nameunnamed protein product
Unique Namemaker-scaffold1362_size45580-snap-gene-0.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000007166 (supercontig:LSalAtl2s:LSalAtl2s403:189750:191334:-1 gene:EMLSAG00000007166 transcript:EMLSAT00000007166 description:"maker-LSalAtl2s403-snap-gene-2.29")

HSP 1 Score: 67.781 bits (164), Expect = 3.639e-12
Identity = 40/157 (25.48%), Postives = 77/157 (49.04%), Query Frame = 0 
Query:   79 QCFVPGECLDSQILDTTISNTSRTCLQHCQSIQGCEWFTFYSDSKICTSLSGCLDLTEKKCGTNCISGEKECPELQCGIQGRCFGALEGIRKVGSVQECGSICANRVECKWHTHDPQHASCTMTNDCPALDKSCQECIASEM-DCNAQGRFKKANYD 234
            +C +  EC +S   +  ++     C + C   + C W+T+ + SK+C +L  C++  + K   +CI+ + ECP  +C   GRC G    ++K  S  +C + C+   ECK+ T    +  C +  +C  +   C+ C+ +E+ +C  +    +   D
Sbjct:   28 RCDLNQECTNSHWKNFKLTEGKEKCQELCSKTKECHWYTYVAHSKLCIALKECINFKDCK---DCITSQIECP--RCFKVGRCEGTGIRVQKTSSAHQCLNRCSELKECKYLTF--VNGLCGLYKNCTDIINDCKTCVTAEVKNCKYESELPRGFTD 177

HSP 2 Score: 51.9878 bits (123), Expect = 3.967e-7
Identity = 37/134 (27.61%), Postives = 65/134 (48.51%), Query Frame = 0 
Query:  235 IXDSKICTSLSGCLDLTEKKCGTNCISGEKECPELQCGIQGRCFGALEGIRKVGSVQECGSICANRVECKWHTHDPQHASCTMTNDCPALDKSCQECIASEMDCNAQDKTAAQTETEDSNGLTLWSYSNQRLIA 368
            +  SK+C +L  C++  + K   +CI+ + ECP  +C   GRC G    ++K  S  +C + C+   ECK+ T    +  C +  +C  +   C+ C+ +E+          + E+E   G T   +S + LIA
Sbjct:   68 VAHSKLCIALKECINFKDCK---DCITSQIECP--RCFKVGRCEGTGIRVQKTSSAHQCLNRCSELKECKYLTF--VNGLCGLYKNCTDIINDCKTCVTAEVK-------NCKYESELPRGFTDSQFSTKILIA 187
The following BLAST results are available for this feature:
BLAST of unnamed protein product vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000071663.639e-1225.48supercontig:LSalAtl2s:LSalAtl2s403:189750:191334:-... [more]
back to top
BLAST of unnamed protein product vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of unnamed protein product vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1362_size45580supercontigscaffold1362_size45580:7167..10489 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1362_size45580-snap-gene-0.15-mRNA-1maker-scaffold1362_size45580-snap-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1362_size45580:7167..10489+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1362_size45580-snap-gene-0.15 ID=maker-scaffold1362_size45580-snap-gene-0.15|Name=unnamed protein product|organism=Tigriopus kingsejongensis|type=gene|length=3323bp|location=Sequence derived from alignment at scaffold1362_size45580:7167..10489+ (Tigriopus kingsejongensis)
ATGACGGTCATTATGAAGGCTAATAGGAAGGCCAATATGACGGTCAATAT
GAATGCCAATATGACGGCCAAGAGGCAGGCCAAGAGGCAGGCCAAGAGGC
AGGCCAAGAGGCAGGCCAAGAGGCAGGCCAAGAGGCAGGCCAAGAGGAAA
GCCAGGTCAAAAATACTAGCAAAGTGATACGCAGCCCACCCAGATGTGGT
TTTCATGTTCTCTTCCGATAAGGCCATGTTGTGGAGATCTTTCCAACCCG
GAAACCTGGGAAATGGGGGGCCAGTTGCATTGTAAACCACCAGAAGTCCA
TTTTTTTCGTTTTTATGGTAGAGAACGTGCAGATTTAAATGGACACAGCA
ATCGCGTATTGGATTTTGGCCATCTAAAATTGTCATTATTTTATTGTGGT
TAGAGCATCTGAAAAGAGTACAAGGACAACTTTTTTGGAATCTAATTTGT
TGGGTTCGGATTTTTGAGACACTAATAGGCTTTTTGTTCAAGCAATTGCA
CACGTGGGACTATAGGAGCAAACCTTGTATGTGGTCTATTGCTCGAAACA
ATTCCCTTTCTTTTACTGTGGATAATAAAAATGCATCCAGAGGCTCTCTC
TGCCTTTTGGGAGCAAAAACTTGGCGATGCACCAAAACGCTTGCTTTGGA
TTTCGAGTGATATCAAAATTTGTGTCCAATAATAATGGCGGGTAAATTTG
CCTTGTTTTCCCCCGCTTTATGGTGGATTTATATTGCCACAAATAGCCAA
AATGTGGTCAAACGGTCTGGGAAACTTCCAAACTTTTCGGTTCTTCAAAT
ATCGACTGAACATGATATTTCGACCGAGCTGGATCTTGCTTCATCACTAA
CAGGCACATTAAACGAATGCCTAAGGTCATATGTCCTGCTTCCAACCTTG
CACTACCTATATAATGCAGAGAGGCCGTTCATTCCATCTGAAGAGAAGAC
GACATTTTCAGTATCTCTTCTCGTATTCAGAATGCCGAGTTTGTCGCCCT
TTGCTCTCATCTTCGTCTTTGTTCCAAGATATTGGGCAGCCGTTCAGAGG
CCCGGCATCCAATGTTTTGTCCCGGGAGAGTGTCTGGACTCGCAAATCCT
GGACACCACCATCAGTAACACCTCCCGAACTTGTCTCCAGCATTGTCAGA
GCATCCAGGGTTGCGAGTGGTTCACCTTCTACTCCGACTCCAAGATCTGC
ACCTCGCTCTCAGGCTGTCTGGATCTGACGGAGAAGAAATGTGGAACCAA
CTGCATCAGTGGCGAGAAGGAATGTCCCGAGCTCCAATGTGGGATCCAGG
GCCGCTGCTTTGGTGCTCTGGAAGGCATTCGGAAGGTGGGCAGTGTCCAG
GAGTGCGGATCCATCTGTGCTAATCGGGTGGAATGCAAGTGGCACACGCA
TGATCCACAGCATGCCTCTTGCACCATGACCAATGATTGTCCAGCCTTGG
ACAAGTCTTGCCAGGAATGCATCGCTTCTGAGATGGACTGCAACGCTCAA
GGTCGGTTTAAAAAGGCCAACTACGATATTNCCGACTCCAAGATCTGCAC
CTCGCTCTCAGGCTGTCTGGATCTGACGGAGAAGAAATGTGGAACCAACT
GCATCAGTGGCGAGAAGGAATGTCCCGAGCTCCAATGTGGGATCCAGGGC
CGCTGCTTTGGTGCTCTGGAAGGCATTCGGAAGGTGGGCAGTGTCCAGGA
GTGCGGATCCATCTGTGCTAATCGGGTGGAATGCAAGTGGCACACGCATG
ATCCACAGCATGCCTCTTGCACCATGACCAATGATTGTCCAGCCTTGGAC
AAGTCTTGCCAGGAATGCATCGCTTCTGAGATGGACTGCAACGCTCAAGG
TCGGTTTAAAAAGGCCAGCCACGAGTCTTGTATTCTCAAGTTTAAACACA
CAGTCTCCATTTTCAGACAAAACAGCGGCACAAACTGAAACAGAAGACTC
GAACGGTTTAACTCTATGGTCCTACAGCAACCAAAGGTTGATAGCATTCA
ACATGGCTGATCAGAAGTCTGTCCAATGCCGGGATGGAGAGCACACCTTT
GGCGAAAATCTGCCAGGATCAGTGGTGAGCGCTTCTTTTCTCGCTCATGT
CAGCGCGCTACATTTTCCAGGGTATTGACATGAGTGCACCGCCTCTAGCG
GCGAGGCTCCAAAGCTGGTACTCCGGCCATAAAAAGATGGAGATTGGGTT
TGAGATTGTGGAATACTATCCCAATATCTCTTAAATCCTAAAACAAGCAG
TCTCTCTCACTCTGTTTCAAAAGGAATTGACAGTTTGGGAGCTTGGCCGC
CAGAGGGGTGGGAGGCACACACGGGATTACCCTGGTAAATAGCAGGCGCT
AGTCGGAGCAAGCAGATCTTCCGGGGTAGGCGCCAGGCAATAACCTAACC
CTAATCACAAGTGAATAATTCCCTGGCAGCTAACGATGATGAACGGCACT
CTCTACGGAGTAAGGGAAACTGCTCAAAAGGAAATTGCCATGGAACATTT
TGATACGGAGCAAAAGAAATGGCTGGCCCAGGGAACCAATTTCAGGTGGG
ATTCAAAGGAAGGCTTGAATGAGAACTATGCCACCATCCTAGCCGATGGA
GCGATATTTCTACTGAATCCAACGGGACAAAACACCATTCTGATTGATCA
AAACGGTCCTCGAAATAATATTCCCACGGCCAAATTCATCCTCGGGCGAG
GAAAAGTGGGTCAGATGTGCATCACCAGAGTGCTCGAGGATGACATCTTC
GTCAGTGGTGGCGTCGAGAACAAGAGGTTCAAACGCAAAAAAAATCTCAG
CAAGAAATTAGTGCCTACCAGCACTTCTTTTCATCTCAACCCGAGAACCC
AGGTTTGAATCACAGCTTTCAAACGCGATACTTGGATTACAGATTCATTT
CTGTTTCAGAAATGGATTCCGTTGCCAGATCTGCCTCAGTCAAGAGTTGG
GCACCAGTGTGAATTCTTTCAGATGGATCAAGGACCTGCAATATTCATTT
TTGGAGGTATAGCAAATATTGGGCAGGTTGATGAAGAGACCAGCCACTAC
ATCTTCCATTGGGCCTCCCAAACATATAAGACTTTGACGAAGGACAATTT
TTCGCGCTTCGCTCATCTGAGTCCCGTGCCCTTCGGGGACACTTTCCTCA
TGTTCTCTCGCACGGAGCAGACTTTGGCTATATACAAGTTCGACTTTCAC
AATGAAGAGAATCAAGTGCAATTTCAAGGCAATGTCACTCTTTCCGAGGA
CGTCTCACTGAGTAACGGATTTGTTCTCCCAAGGACTGACATGCTGCCTT
GCGTGGACAAAGCCAATGTCTAG
back to top
Synonyms
The feature 'unnamed protein product' has the following synonyms
Synonym
Tk10794
Add to Basket