hypothetical protein Y032_0503g2641, maker-scaffold1402_size43054-snap-gene-0.6 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein Y032_0503g2641
Unique Namemaker-scaffold1402_size43054-snap-gene-0.6
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein Y032_0503g2641 vs. L. salmonis genes
Match: EMLSAG00000003248 (supercontig:LSalAtl2s:LSalAtl2s178:344519:357576:-1 gene:EMLSAG00000003248 transcript:EMLSAT00000003248 description:"maker-LSalAtl2s178-augustus-gene-3.13")

HSP 1 Score: 125.176 bits (313), Expect = 1.022e-34
Identity = 55/108 (50.93%), Postives = 78/108 (72.22%), Query Frame = 0 
Query:   52 DGFTSLNLSSSDCSSPIGSLDGTVQMVDEDGRISDFTTIQWQIGLGQTFCYQFQSQKESHHRGLIEVHFQSLRSVHAISNNYHFMLPKANADCFCDCPGGANRCNAFT 159
            +G T     S  CS+P+GS+DG + +  + G ISDFTT+QWQI LG+T CY+F+S+  S  +G IEV ++S+RS+++ISN+Y F L K+N  C+CDCPGG+N CN  T
Sbjct:   25 EGATFRKKGSLRCSNPLGSMDGRILVESQTGEISDFTTLQWQIRLGETVCYRFKSETPSGLKGYIEVTYESIRSIYSISNHYFFRLAKSNVQCYCDCPGGSNSCNTNT 132
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BLAST of hypothetical protein Y032_0503g2641 vs. nr
Match: gi|1325307069|ref|XP_023335151.1| (uncharacterized protein LOC111706494 [Eurytemora affinis])

HSP 1 Score: 106.301 bits (264), Expect = 9.072e-24
Identity = 45/88 (51.14%), Postives = 66/88 (75.00%), Query Frame = 0 
Query:   64 CSSPIGSLDGTVQMVDEDGRISDFTTIQWQIGLGQTFCYQFQSQKESHHRGLIEVHFQSLRSVHAISNNYHFMLPKANADCFCDCPGG 151
            CSSP GS++G + + +E G ++D T + WQIGLG+T CY+F S+  S H G++EV F SL+SV++I+++Y F LP  +A+C CDCPGG
Sbjct:   61 CSSPSGSVEGRIVVEEEGGTLTDMTVLTWQIGLGETLCYRFSSEGSSLH-GVVEVRFSSLKSVYSITDSYQFQLPAGHAECICDCPGG 147
The following BLAST results are available for this feature:
BLAST of hypothetical protein Y032_0503g2641 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000032481.022e-3450.93supercontig:LSalAtl2s:LSalAtl2s178:344519:357576:-... [more]
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BLAST of hypothetical protein Y032_0503g2641 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein Y032_0503g2641 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325307069|ref|XP_023335151.1|9.072e-2451.14uncharacterized protein LOC111706494 [Eurytemora a... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1402_size43054supercontigscaffold1402_size43054:18789..20430 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1402_size43054-snap-gene-0.6-mRNA-1maker-scaffold1402_size43054-snap-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1402_size43054:18789..20430-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1402_size43054-snap-gene-0.6 ID=maker-scaffold1402_size43054-snap-gene-0.6|Name=hypothetical protein Y032_0503g2641|organism=Tigriopus kingsejongensis|type=gene|length=1642bp|location=Sequence derived from alignment at scaffold1402_size43054:18789..20430- (Tigriopus kingsejongensis)
TTGAGATCAGAAAGTCCGGCCTCCAACAAAAGATGGCTTCCCGTTGGTGG
ATTCCGCTCCATTGTCTCCCATGGCTTTTAGCCGGGCCGAGCTCGCCCAT
TCACATCCGGCCCACGTGGCCGGGGTCCGAACCCGCGACAGTGGAGGCCT
CCAATCCTCTCAAGAGTCACCAGTCGGGGGTGGATGATGGGTTCACATCG
TTAAACCTCTCTTCGTCTGATTGTTCCAGTCCCATTGGATCTTTAGATGG
AACGGTCCAAATGGTCGACGAGGACGGTCGGATCTCGGACTTTACGACCA
TCCAGGTAGCATTTCTGGGGTTATCAAGTCGATACCAAGTTAAAGCCACT
CGCCTCTAATGGACCCGGTTCACGAAAGTGCATTTCCCCTGTCTATTTGA
CCCAATCTGGCCCTCATGATCCGCACCACGATGCAAACAATGCTCTAATG
CATCAGCTCGCATCGAACGAGGGGGACCAAACTAAGTACCCTCGTATTGT
GTACGTCGTTTCTAACTATGTCTCTCTTTCTCTCTCTCTCCCGTTTTGCG
TCTGAAAAATCGCTTTATTTCAAACCTTGAACTTTGGCAACATTAGGAGC
ATTCTCTTTTTTTTGTCCGAAGACATTTGCACATCTCCTGGACTATTGAT
GGACGCCGGAGGGAAAAGCGATGGGATAGGCAGAAAAAAGCATTATTATA
ATGGATAGCTAGGGTGTGAACTCGCAAGTAGGGGGTGTCACCTTCGAGCG
GGGAATATTATCCATCCCCGGACAAGACATTTCAAACACAGATGATTTTT
AAGAGTTTTTTTCTCCACTGGAAAACGATGCGGATCCATCAGTATTGACA
GACTGATTTGGGACTTAGTCTCTCCCCAAGGATTGGGCTTAATCGGGCCG
ATCCTCTTCATTGTCCGCACGGCAATCATCCAAGCCGAAAGCAAAAACAT
TTTGCACCCAGGGGTTGGCTTCCGAAATGATCGATGCCATTGTCTGTAAT
GTCGCTTTTGCCTGCTCCCAAAACGTGTTCCGTCTGTCACATTCCAAGCT
GTCAAGGTACAACAAGCCAAGGGTCACAAGTACGCCCAGAACAATGTGCA
ACGTGTTAGGAGATCCAAAGTGATTTGTGGCAAAAACACATGGGTGGAAG
AAGTCAATTTCATGCTCATTTCACCGAATGACGACCCTGAGCGAGTTGAG
GTCTCAATGGCAGCCAGAGAGATGTCGAATTTCACATCTGTTGAGGGCGT
TTATCAAGGTACAGGGGCCTAGGAGTTATTAAGAAAGGTTTCCTCCCACC
TCCTCTTGACTAAGTCAAATTGAATTCCCTCAGCCAGGTCCAACTTCCCC
CTCATGGAAATTCGTTATCAGAAAGTTATTATTGAATGTGATGGGTTTGT
TGACTGACTCATTCATCCGAGGTTGTTTGTTCCAGTGGCAAATTGGTCTT
GGACAAACATTCTGCTACCAATTCCAATCCCAGAAGGAGTCTCATCATCG
CGGACTCATCGAAGTTCACTTCCAGAGCTTGCGAAGTGTCCACGCAATTT
CAAACAACTACCATTTCATGCTGCCCAAAGCAAACGCGGATTGCTTCTGC
GATTGCCCAGGTGGAGCGAACCGATGCAACGCTTTTACCGAC
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Synonyms
The feature 'hypothetical protein Y032_0503g2641' has the following synonyms
Synonym
Tk02457
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