---NA---, maker-scaffold1404_size42976-snap-gene-0.12 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000007935 (supercontig:LSalAtl2s:LSalAtl2s469:255497:258790:1 gene:EMLSAG00000007935 transcript:EMLSAT00000007935 description:"maker-LSalAtl2s469-augustus-gene-2.21") HSP 1 Score: 270.396 bits (690), Expect = 3.285e-83 Identity = 179/543 (32.97%), Postives = 280/543 (51.57%), Query Frame = 0
Query: 16 LNCIRDVKFPVNYSLHAVELRPTEGDPGLVSLTIRIP-GEIRVVHGSEEIYGAIKAAVKKMTSSTEEPEGLQILEKQGAWVLKLEHGL-----------FAKKQGVEMLCQVLENISSAGFEVVTSSRFSTTPGFELRTWILKKAATPIENPMVIALALPAPDKICVVGAQEDTPANNVVMEAIAKIMPP-----SATEV-LEEKAEEVEAKTVTSE-LKEGDEEKPAENPEDGEKKDEADNKEVKSEVEPKKEEKPTPDKVEEGEVKKEEVDEEKPEKEANDEKVKEF--ILDMNQL-------------NADNGKILRSKLLLEILHQLFCRQWKLVC-CSRIPFGGDHEVLFFVYDARILPGLG-QDHFSMLELEKPDLVRLYGMNEDLEGKVKTIMQEHWMPGLDSKDPEVVHE---VKTFKLLETPWNQ-SCVVKEGSGPMPRLAVSPQILVAKFLLALNKAEMNVYESVTLDAGKVDQKTLIIFKQSNVGFTQELTLKLAGVNRIGVIGGSEADIEAIRKCLQSRWPYPLTHDYKVE 518
LNC+++ FP +Y LH+V+L P +PG +S+T+ P GEIRVVHG+E+++ I V +SS +L K W+L+ G+ F +G + C +LE I + G+E+V S+ +TTP FEL TWI+KK +TP+ N V L +KI ++G + NNVV AI K P S+ +V + K EE ++K ++ L+E D E A DG D+ DN E P+ E+ P P K + + +K F IL + + D+ ++ L++E++H LFCRQWKLV C + H+ LFF D RILP LG + S LELE+P+++R Y +N +E K+K+ + E W GL K+ + HE VK+ + PW Q SC E + ++L K + ++ N+Y S+ ++ + Q +LIIF+QSN+ F++ + L L+G N++ +IGG + E R +++RWPYP++ D +E
Sbjct: 27 LNCVKN-GFPASYXLHSVDLLPPSDNPGYISITLTSPPGEIRVVHGNEDLHKTILDVVH--SSSYNWKGDTTVLHKGEGWILRFGEGIQEEEDGVDRLIFRSTKGCLLACAILERIITNGWEIVASTELTTTPNFELCTWIIKKCSTPLYNGEVSCLLFDCDNKIKILGTKSQIQINNVVRRAIDKKWPKGLLCDSSDKVPVTLKKEESDSKKSNNDMLEEIDRELKAS--RDG--LDQIDNGE------PEHEKTPRPG-----------------SKSSFGKNIKRFKMILIVQGICVEFELWGSPWRPTKDSERVQSRLLVIELIHSLFCRQWKLVTTCGNLLPSSSHDTLFFCRDGRILPALGGEKGLSALELERPNVIRFYNVN--VESKLKSTIIESWSHGLSCKETIIEHESEDVKSLYCNDHPWKQNSCQTWESTS-------ESRLLTQKLIKTMSANNYNLYGSIRMNRHEGSQSSLIIFRQSNISFSESMCLHLSGQNKLCIIGGGADERETXRNAIETRWPYPISQDKNME 530
BLAST of ---NA--- vs. nr
Match: gi|1325265666|ref|XP_023337313.1| (uncharacterized protein LOC111708228 [Eurytemora affinis]) HSP 1 Score: 100.138 bits (248), Expect = 2.800e-18 Identity = 62/225 (27.56%), Postives = 114/225 (50.67%), Query Frame = 0
Query: 310 HQLFCRQWKLVCCSRIPFGGDHEVLFFVYDARILPGLGQDHFSMLELEKPDLVRLYGMNEDLEGKVKTIMQEHWMPGLDSKDPEVVHEVKTFKLLETPWNQSCVVKEGSGPMPRLAVSPQILVAKFLLALNKAEMNVYESVTLDAGKVDQKTLIIFKQSNVGFTQELTLKLAGVNRIGVIGGSEADIEAIRKCLQSRWPYPLTHDYKVEKDGNEEEFWQFKELSD 534
+++F RQWKLV C+R+ G +L F +D+RILPG+GQ + L +E+ + V L+ +N ++ G++ + GL+ K+ F L P ++S L + + + + N++ S+ G +LI+F+ SN+ + LTL L N I + G + ++ IR+ ++SRWPY ++ D+++ KDG ++ + K+ D
Sbjct: 631 YKMFSRQWKLVTCTRLQ-GSQESLLLFQHDSRILPGIGQQALAGLSIEQGE-VELFNINPEISGRISGDL------GLERKE--------GF-LFSAPVDESA------------------LYSNLVFSFCQHSYNIFSSIQSPTG-----SLIMFRSSNLVASSTLTLHLVKGNTIRLSGATLEEVNVIREVIRSRWPYAISLDHQLFKDGEVQKDVEVKDAED 815 HSP 2 Score: 80.4925 bits (197), Expect = 4.797e-12 Identity = 46/174 (26.44%), Postives = 88/174 (50.57%), Query Frame = 0
Query: 13 VRNLNCIRDVKFPVNYSLHAVELRPTEGDPGLVSLTIRI---------------PGEIRVVHGSEEIYGAIKAAVKKM-----TSSTEEPEGLQILEKQGAWVLKLEHGLFAKKQGVEMLCQVLENISSAGFEVVTSSRFSTTPG----FELRTWILKKAATPIENPMVIALAL 162
+++ NC++ + P ++S H++ +RP E DPGL +LT+R+ GE+R+VHG+ EI+ ++ ++K + S++EEP + WV +E + + + + +SS ++V++S + P +E+ TWILK+ P IA++L
Sbjct: 4 MQSFNCVKS-EVPSSFSFHSLSVRPAEYDPGLATLTLRVQVRSGRGSTGDHESMSGEVRIVHGTAEIHNVVETSIKNVFNSEDQSTSEEPGTKEEDTPDEFWVRLIEGSIQDESVRSRFVLDLFSGLSSISWDVISSCNLTRNPSNLQTYEMFTWILKRKMVPAPGIECIAISL 176
BLAST of ---NA--- vs. nr
Match: gi|1263121940|gb|PFX18472.1| (Serine/threonine-protein phosphatase 4 regulatory subunit 2 [Stylophora pistillata]) HSP 1 Score: 69.3218 bits (168), Expect = 1.300e-8 Identity = 80/301 (26.58%), Postives = 121/301 (40.20%), Query Frame = 0
Query: 308 ILHQLF----CRQWKLVCCSRIPFGGDHEVLFFVYDARILPG----------LGQDHFSMLELEKPDLVRLYGMNEDLEGKVKTIMQEHWMPGLDSKDPEVVHEVKTFKLLETPWNQSCVVKEGSGPMPRLAVSPQILVAKFLLALNKAEMNVYESVTLDAGKVDQ-KTLIIFKQSNVGFTQELTLKLAGVNRIGVIGGSEADIEAIRKCLQSRWPYPLTHDYKVEKDGNEEEF------WQ------------------FKELSDLGWRVQFCGDISSQTMAQKRPALPERPSDPVSLFF 569
ILH L +QWKL S + + LFF YD I+PG L Q +F+ + L DL+RL G E L V+T +Q W G+ ++ FKL PW S AV + LV K L AL +V + ++D + D K+ +IFK S + + L +++ +I E + + +QS++ L +V+ G EF W F L+ WR D+S++ + QK P+ P D S+FF
Sbjct: 503 ILHTLIGALQVKQWKLYANSNLRRSAN--TLFFEYDPNIVPGMQFSPMPGMQLSQSYFT-VSLNSHDLLRLIGAPEGLVSAVRTTLQTFWSRGI--QEERAYATSWQFKLRGNPWWASG----------DEAVDSRFLVLKILEALQAYGWSV--AASIDCSRKDSDKSSVIFKTSQPTQSHFFCVSLHETDKLRLINAPEDVTKICQDVIQSQY---LLGIQRVQIYGKSLEFKFLGNPWSCGIDGHDGIHGRSMLLHIFAALASRFWRPVMSADVSAKYVHQKDG--PDYPLDVDSIFF 781
BLAST of ---NA--- vs. nr
Match: gi|1270077571|ref|XP_022801921.1| (uncharacterized protein LOC111339512 [Stylophora pistillata] >gi|1270077573|ref|XP_022801922.1| uncharacterized protein LOC111339512 [Stylophora pistillata]) HSP 1 Score: 65.855 bits (159), Expect = 1.139e-7 Identity = 81/301 (26.91%), Postives = 122/301 (40.53%), Query Frame = 0
Query: 308 ILHQLF----CRQWKLVCCSRIPFGGDHEVLFFVYDARILPG----------LGQDHFSMLELEKPDLVRLYGMNEDLEGKVKTIMQEHWMPGLDSKDPEVVHEVKTFKLLETPWNQSCVVKEGSGPMPRLAVSPQILVAKFLLALNKAEMNVYESVTLDAGKVDQ-KTLIIFKQSNVGFTQELTLKLAGVNRIGVIGGSEADIEAIRKCLQSRWPYPLTHDYKVEKDGNEEEF------WQ------------------FKELSDLGWRVQFCGDISSQTMAQKRPALPERPSDPVSLFF 569
ILH L +QWKL S + + LFF YD I+PG L Q +F+ + L DL+RL G E L V+T +Q W G+ ++ FKL PW SG AV + LV K L AL +V + ++D + D K+ +IFK S + + L +++ +I E + + +QS++ L +V+ G EF W F L+ WR D+S++ + QK P+ P D S+FF
Sbjct: 201 ILHTLIGALQVKQWKLYANSNLRRSAN--TLFFEYDPNIVPGMQFSPMPGMQLSQSYFT-VSLNSHDLLRLIGAPEGLVSAVRTTLQTFWSRGI--QEERAYATSWQFKLRGNPW-------WASGDE---AVDSRFLVLKILEALQAYGWSV--AASIDCSRKDSDKSSVIFKTSQPTQSHFFCVSLHETDKLRLINAPEDVTKICQDVIQSQY---LLGIQRVQIYGKSLEFKFLGNPWSCGIDGHDGIHGRSMLLHIFAALASRFWRPVMSADVSAKYVHQKDG--PDYPLDVDSIFF 479 The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1404_size42976:13419..19259- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1404_size42976-snap-gene-0.12 ID=maker-scaffold1404_size42976-snap-gene-0.12|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=5841bp|location=Sequence derived from alignment at scaffold1404_size42976:13419..19259- (Tigriopus kingsejongensis)back to top Synonyms
The feature '---NA---' has the following synonyms
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