heterogeneous nuclear ribonucleoprotein 27c-like isoform x3, maker-scaffold141_size315519-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview


Name	heterogeneous nuclear ribonucleoprotein 27c-like isoform x3
Unique Name	maker-scaffold141_size315519-snap-gene-0.13
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000006441 (supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1 gene:EMLSAG00000006441 transcript:EMLSAT00000006441 description:"maker-LSalAtl2s351-snap-gene-6.33")

HSP 1 Score: 330.487 bits (846), Expect = 1.588e-110
Identity = 155/206 (75.24%), Postives = 174/206 (84.47%), Query Frame = 0

Query:   58 KKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASP 263
            K+  HEDEEQGKLFVGGLSWDT QE+LL YFG FGEVIDCVVMKN ESGRSRGFGFVTF+DPANIDAVL+S PH LDGRTIDPKACNPRSMQKPKK+N  YFPKVFLGGLP N+TETDLR+FFS YGEV EV+IMYDQEKKKSRGFGFLSF+DD A ++A +EH+V I++KQVE+KRAEPRT   + N     S++QWG      P
Sbjct:   31 KQRAHEDEEQGKLFVGGLSWDTTQETLLRYFGGFGEVIDCVVMKNAESGRSRGFGFVTFSDPANIDAVLSSCPHTLDGRTIDPKACNPRSMQKPKKTN--YFPKVFLGGLPSNLTETDLRNFFSRYGEVCEVIIMYDQEKKKSRGFGFLSFSDDQAVNRACAEHFVNIQNKQVEIKRAEPRTQTATWN---KDSMEQWGAASMTVP 231

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000007863 (supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1 gene:EMLSAG00000007863 transcript:EMLSAT00000007863 description:"maker-LSalAtl2s460-augustus-gene-1.7")

HSP 1 Score: 153.68 bits (387), Expect = 5.396e-42
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 0

Query:   64 DEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            D   GKLFVGGLSW T  + L  YFGQFG V D          RSRGFGF+TF+ P  +D VLA   H LDG+ IDPK   P+S  K  K+      K+F+GG+  + +  ++++ F+ +G+V E  ++ DQ+ K+ RGFGF++F  +    +    H+  +K+K+VE K+A+P+
Sbjct:   47 DSSPGKLFVGGLSWQTTPDKLREYFGQFGSVTD----------RSRGFGFITFSTPDAVDRVLAVVTHTLDGKKIDPKHATPKSKSKANKTK-----KIFVGGVSQDTSAEEVKAXFNQFGKVEEAXMLMDQQTKRHRGFGFVTFESEDVVDRVCEIHFHTVKNKKVECKKAQPK 206

HSP 2 Score: 66.2402 bits (160), Expect = 5.834e-12
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0

Query:   59 KHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPR 146
            K + +  +  K+FVGG+S DT+ E + A F QFG+V +  ++ + ++ R RGFGFVTF     +D V     H +  + ++ K   P+
Sbjct:  119 KSKSKANKTKKIFVGGVSQDTSAEEVKAXFNQFGKVEEAXMLMDQQTKRHRGFGFVTFESEDVVDRVCEIHFHTVKNKKVECKKAQPK 206

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000000160 (supercontig:LSalAtl2s:LSalAtl2s1025:101799:103083:1 gene:EMLSAG00000000160 transcript:EMLSAT00000000160 description:"maker-LSalAtl2s1025-augustus-gene-0.45")

HSP 1 Score: 128.257 bits (321), Expect = 4.547e-33
Identity = 69/180 (38.33%), Postives = 103/180 (57.22%), Query Frame = 0

Query:   65 EEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQ--YFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFA--DDVACSKAVSEHYVMIKDKQVEVKRAEPRTN 240
            E++ KLF+GGL++ T ++ L  YF ++GE++D VVM   ++ RSRGFGFVTFA      A     PH +D  TI+ K   P+   +      Q     K+F+GGL  +  +  L++FF  +GE+++ V+M  ++ K+SRGFGF  +A  D V    A   H   I   +VE KRA PR +
Sbjct:   12 EKERKLFLGGLNYSTTEDGLKKYFEKYGELVDIVVMXFPDTRRSRGFGFVTFAQVDQAXACFEERPHTIDSTTIETKRATPKEEMESADEGSQPEVMRKLFIGGLDYSTDDETLKAFFEQFGELVDCVVMKFRDTKRSRGFGFXXYAHXDXVDXXXAARPH--TIDGAKVETKRATPRED 189

HSP 2 Score: 122.094 bits (305), Expect = 6.913e-31
Identity = 68/175 (38.86%), Postives = 99/175 (56.57%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPR-SMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAV--SEHYVMIKDKQVEVKRAEPRTN 240
            KLF+GGL + T  E+L A+F QFGE++DCVVMK  ++ RSRGFGF  +A    +D   A+ PH +DG  ++ K   PR  + KP+ S+     K+F+GGL   I + DL+ +FS                 K RGFGF+ F D     K V   +HY  + D +++VK+A  R++
Sbjct:  110 KLFIGGLDYSTDDETLKAFFEQFGELVDCVVMKFRDTKRSRGFGFXXYAHXDXVDXXXAARPHTIDGAKVETKRATPREDVAKPESSSS--VKKIFIGGLKDGIEDEDLKDYFS-----------------KKRGFGFVEFDDYDPVDKIVLIGKHY--LNDWRIDVKKAISRSD 263

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000005340 (supercontig:LSalAtl2s:LSalAtl2s287:281236:323990:-1 gene:EMLSAG00000005340 transcript:EMLSAT00000005340 description:"augustus_masked-LSalAtl2s287-processed-gene-3.0")

HSP 1 Score: 111.309 bits (277), Expect = 5.371e-28
Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 0

Query:  109 RGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            RGFGFVTF+DP ++D VL++  H LDG+ IDPK   PR    PK   V    K+F+GGL    T  D++++F  +G + + ++M+D++  + RGFGF++F  +    K    H+  I +K VE K+A+P+
Sbjct:    7 RGFGFVTFSDPNSVDKVLSNGSHDLDGKKIDPKVAFPRRAH-PKM--VTRTKKIFVGGLSAPSTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPK 133

HSP 2 Score: 66.6254 bits (161), Expect = 1.277e-12
Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKP 151
            K+FVGGLS  +  E +  YF QFG + D ++M + ++ R RGFGFVTF     +D V     H ++ + ++ K   P+ +  P
Sbjct:   56 KIFVGGLSAPSTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKEVMIP 138

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000001242 (supercontig:LSalAtl2s:LSalAtl2s1202:105888:108177:-1 gene:EMLSAG00000001242 transcript:EMLSAT00000001242 description:"maker-LSalAtl2s1202-snap-gene-0.50")

HSP 1 Score: 110.923 bits (276), Expect = 1.024e-26
Identity = 65/181 (35.91%), Postives = 98/181 (54.14%), Query Frame = 0

Query:   66 EQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESG-RSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPR---------SMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKA--VSEHYVMIKDKQVEVKR 234
            E+ KLF+GGL+ +T ++ L  +F QFG+++D  VM++ E G  SRGFGFVTFA     +  L    H L+ + I+PK   P           ++       +    +F+G L   I E DL  +FS +G+VI  V +YD+E    + FGF+ FAD     K   V++HY+  K  +VE+ R
Sbjct:   80 EERKLFLGGLAPETIEKDLRKHFSQFGQLVDVQVMRDREQGGISRGFGFVTFACSFMAETALEQKEHILNXKKIEPKYATPDIPRYKRTIPELEAQMDEECKNKRSIFVGALKDTIGEEDLVRYFSGFGKVIRAVKIYDKETGNKKTFGFVDFADFGIVRKVMNVTKHYIQGKRIRVELSR 260

HSP 2 Score: 73.1738 bits (178), Expect = 3.789e-14
Identity = 42/129 (32.56%), Postives = 66/129 (51.16%), Query Frame = 0

Query:   64 DEE---QGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQY---FPKVFLGGLPPNITETDLRSFFSHYGEV 186
            DEE   +  +FVG L     +E L+ YF  FG+VI  V + + E+G  + FGFV FAD   +  V+  + H++ G+ I  +   PR         +++      VF+GGL   I + +L  +FS +G V
Sbjct:  177 DEECKNKRSIFVGALKDTIGEEDLVRYFSGFGKVIRAVKIYDKETGNKKTFGFVDFADFGIVRKVMNVTKHYIQGKRIRVELSRPR---------IEFSHQTKTVFVGGLEDGIDDPELYKYFSEFGFV 296

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000007356 (supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-1 gene:EMLSAG00000007356 transcript:EMLSAT00000007356 description:"snap_masked-LSalAtl2s418-processed-gene-1.5")

HSP 1 Score: 103.605 bits (257), Expect = 7.649e-26
Identity = 59/176 (33.52%), Postives = 98/176 (55.68%), Query Frame = 0

Query:   65 EEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNI-TETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRT 239
            +E  K+FVGGL W+T +  L  YF QFGE+    +  N  +G+SR F FV F D  ++  VL ++ H ++ + +D K    R+  KP         KVF GGL P   +E +L+ +FSH+G ++E  I  D+ K + + FGF++F  + +  K +    V +   +++++RA P+ 
Sbjct:    8 DEDRKIFVGGLCWETGEVQLKEYFSQFGEIESANLKLNSVTGKSRCFAFVLFKDTESVSKVLQNT-HAINSKKVDVK----RAKAKP--------GKVFFGGLHPESPSEEELKEYFSHFGNILEFEIPQDKIKNERKSFGFVTFEKEESMKKVLKVGKVSLAHCELDLRRANPKI 170

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000005517 (supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-1 gene:EMLSAG00000005517 transcript:EMLSAT00000005517 description:"maker-LSalAtl2s297-augustus-gene-3.62")

HSP 1 Score: 98.9821 bits (245), Expect = 4.434e-22
Identity = 86/291 (29.55%), Postives = 127/291 (43.64%), Query Frame = 0

Query:   58 KKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKS--------NVQYFP--------KVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASP--------TPNGHAAPAPAGFSGWGAPPGAPPAPATAYP-AQYTSPQPPTHAH---HWGPGPPQHGAPP 320
            K   +E+ E   LFVG LS  T +  L  YF  FG +    +  + E+G+++ FGF+ F     I  +L    H +DG+ ++ +  +   + K K S        N +  P        K+F+GG+  N    DLRS+FS +G V  V ++ D    + RGFGF++F ++       S  Y  IK K+VE K+A       S++ TK   ++    PP A P         PN + +P   G   W A            P A Y SP P T  +       G P H  PP
Sbjct:   12 KVFSNEESEVMDLFVGNLSLYTTEFKLQTYFSTFGTLTSVKICTHPENGKNKRFGFLNFESADVISKILNYPRHEIDGKILEIRYASKNMLNKRKNSVVKAKSPENEEVNPRIETSNKAKIFVGGVSQNAKVDDLRSYFSSFGPVQNVTLLPDHITGRHRGFGFVTFENESTAEVVCSSRYHTIKMKKVECKKASVSRATKSYSDTKKPLLE----PPIAPPPTRLFPMIDPN-NKSPGLLGEHPWXALTNTGTGGLLLNPXALYPSPFPFTPVYIDPCMSLGSPHH--PP 295

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000012985 (supercontig:LSalAtl2s:LSalAtl2s98:287705:288759:1 gene:EMLSAG00000012985 transcript:EMLSAT00000012985 description:"maker-LSalAtl2s98-snap-gene-3.11")

HSP 1 Score: 82.4185 bits (202), Expect = 4.927e-18
Identity = 50/144 (34.72%), Postives = 79/144 (54.86%), Query Frame = 0

Query:   61 RHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGG-LPPNITETDLRSFFSHYGEVIEV--VIMYDQEKKKSR 201
            R   E+  KLFVGGL  + ++  L  YF  +G V   V+  +  +GRSRGF FV FA P ++++VL    H + G+ +   AC   + ++          KV++G  L  +ITE D++S FS YG V+E+  ++  D  ++ SR
Sbjct:   10 RASSEDDRKLFVGGLPQEASENDLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLESVL-EQEHVVKGKKV---ACKKATAKQ---------GKVYVGKFLDGSITEEDIKSHFSQYGTVVEIQQLLFCDLRQRGSR 140

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000008061 (supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1 gene:EMLSAG00000008061 transcript:EMLSAT00000008061 description:"augustus_masked-LSalAtl2s47-processed-gene-2.0")

HSP 1 Score: 82.0333 bits (201), Expect = 1.197e-17
Identity = 54/175 (30.86%), Postives = 88/175 (50.29%), Query Frame = 0

Query:   64 DEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            DE+  KLFVGGL  D     +  +F  FGE+    +  + ++GRSRGF FV F     ++   A S  H    T+  K    +  Q  +        KV++G L P I++ D+++ FS YG V  V   +D+ K + + F F++F  +    K + E  V +K  ++E+K+  P+
Sbjct:   20 DEDDRKLFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEK--AVSAEH----TVKSKKVAVKKAQAKQ-------GKVYVGKLKPEISDEDIKTHFSQYGPVANVEQPFDKTKNERKNFCFITFEKEEPAKKLLKEGTVTLKGAELEIKKVXPK 181

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Match: EMLSAG00000006940 (supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-1 gene:EMLSAG00000006940 transcript:EMLSAT00000006940 description:"maker-LSalAtl2s393-snap-gene-5.57")

HSP 1 Score: 75.485 bits (184), Expect = 1.177e-15
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0

Query:   68 GKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASS 129
            GK+F+GGLSW T  E +  YF QFG++ + +VMK+  + RSRGFGF+TF +P  +D VL  S
Sbjct:   29 GKMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLGLS 90

HSP 2 Score: 55.0694 bits (131), Expect = 9.296e-9
Identity = 23/64 (35.94%), Postives = 40/64 (62.50%), Query Frame = 0

Query:  161 KVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVM 224
            K+F+GGL    T   +R +FS +G++ EV++M D   ++SRGFGF++F +  A  K +    ++
Sbjct:   30 KMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLGLSLIV 93

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|76803817|sp|P48809.2|RB27C_DROME (RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C; Short=Hrb27-C; AltName: Full=HRP48.1; AltName: Full=hnRNP 48)

HSP 1 Score: 267.7 bits (683), Expect = 4.554e-84
Identity = 120/183 (65.57%), Postives = 145/183 (79.23%), Query Frame = 0

Query:   63 EDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHN 245
            E++E+GKLFVGGLSW+T QE+L  YF +FG++IDCVVMKN ESGRSRGFGFVTFADP N++ VL + PH LDGRTIDPK CNPR++QKPKK       KVFLGGLP N+TETDLR+FF+ YG+V EVVIMYDQEKKKSRGFGFLSF ++ +     +E Y+ +  KQVE+K+AEPR      N
Sbjct:    2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGY---KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQN 181

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE (RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in azoospermia-associated protein 1)

HSP 1 Score: 207.994 bits (528), Expect = 3.001e-61
Identity = 109/231 (47.19%), Postives = 143/231 (61.90%), Query Frame = 0

Query:   65 EEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQ----KPK-------KSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQ-SVDQWGMPPQASPTPNGHAAPAPAGFSGWGAPP 283
            +E GKLFVGGL W T QE+L +YF Q+GEV+DCV+MK+  + +SRGFGFV F DP  +  VLAS PH LDGR IDPK C PR MQ    +PK       +S+     K+F+GG+P N  ET+LR +F  +G V EVV++YD EK++ RGFGF++F D+ +  +AV+ H+  I  K+VEVKRAEPR    S N    Q    QWG            +  AP+  +GW   P
Sbjct:    7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD---SKNQAPGQPGASQWG------------SRVAPSAANGWAGQP 222

HSP 2 Score: 67.3958 bits (163), Expect = 7.314e-11
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0

Query:   61 RHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPR 146
            R +  +  K+FVGG+  +  +  L  YF +FG V + V++ + E  R RGFGF+TF D  ++D  +    H + G+ ++ K   PR
Sbjct:  106 RSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN (RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in azoospermia-associated protein 1)

HSP 1 Score: 207.608 bits (527), Expect = 3.967e-61
Identity = 98/185 (52.97%), Postives = 129/185 (69.73%), Query Frame = 0

Query:   65 EEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQ----KPK-------KSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            +E GKLFVGGL W T QE+L +YF Q+GEV+DCV+MK+  + +SRGFGFV F DP  +  VLAS PH LDGR IDPK C PR MQ    +PK       +S+     K+F+GG+P N  ET+LR +F  +G V EVV++YD EK++ RGFGF++F D+ +  +AV+ H+  I  K+VEVKRAEPR
Sbjct:    7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191

HSP 2 Score: 68.1662 bits (165), Expect = 3.824e-11
Identity = 29/87 (33.33%), Postives = 49/87 (56.32%), Query Frame = 0

Query:   61 RHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRS 147
            R ++ +  K+FVGG+  +  +  L  YF +FG V + V++ + E  R RGFGF+TF D  ++D  +    H + G+ ++ K   PR 
Sbjct:  106 RSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 192

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA (RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in azoospermia-associated protein 1; AltName: Full=Proline-rich Vg1 mRNA-binding protein)

HSP 1 Score: 204.912 bits (520), Expect = 1.232e-60
Identity = 108/232 (46.55%), Postives = 146/232 (62.93%), Query Frame = 0

Query:   65 EEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQ----KPKKSNVQYFP--------KVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQS-----VDQWGMPPQASPTPNGHAAPAPAGFSGW 279
            +E GKLFVGGL W T QE+L +YF Q+GEV+DCV+MK+  + +SRGFGFV F DP  +  VLAS PH LDGR IDPK C PR MQ    +P++   Q  P        K+F+GG+P N  ET+L+ +F+ +G V EVV++YD EK++ RGFGF++F D+ +  +AV+ H+  I  K+VEVKRAEPR        +K Q+      +QWG     S T NG     P  + G+
Sbjct:    7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD-------SKSQTPGPPGSNQWGSRAMQS-TANGWTGQPPQTWQGY 230

HSP 2 Score: 68.5514 bits (166), Expect = 2.479e-11
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0

Query:   56 QGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPR 146
            Q K+ R E+    K+FVGG+  +  +  L  YF +FG V + V++ + E  R RGFGF+TF D  ++D  +    H + G+ ++ K   PR
Sbjct:  102 QQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 192

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|74676196|sp|O94432.1|YHKF_SCHPO (RecName: Full=Uncharacterized RNA-binding protein C660.15)

HSP 1 Score: 177.948 bits (450), Expect = 3.327e-49
Identity = 78/175 (44.57%), Postives = 118/175 (67.43%), Query Frame = 0

Query:   64 DEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            + E GK+F+GGL+W+T  +SL  YF QFGEV+DC VM++  +GRSRGFGF+TF +P  ++ V+ S  HHLDG+ IDPK   PR  Q+          K+F+GG+P + TE + R+FF+ +G V++  +M D++  + RGFGF+++ ++ A    +S+ Y+ I  K VEVKRA P+
Sbjct:  159 NREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVM-SKEHHLDGKIIDPKRAIPREEQEKT-------AKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK 325

HSP 2 Score: 70.8626 bits (172), Expect = 5.840e-12
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 0

Query:   61 RHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRS 147
            R E E+  K+FVGG+  D  +E    +F QFG V+D  +M + ++GR RGFGFVT+ + + ++A ++     + G+ ++ K   P++
Sbjct:  240 REEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKA 326

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|51316193|sp|O43347.1|MSI1H_HUMAN (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 174.481 bits (441), Expect = 5.760e-49
Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            K+F+GGLSW T QE L  YFGQFGEV +C+VM++  + RSRGFGFVTF D A +D VLA S H LD +TIDPK   PR  Q PK   V    K+F+GGL  N T  D++ +F  +G+V + ++M+D+   + RGFGF++F  +    K    H+  I +K VE K+A+P+
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ-PKM--VTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187

HSP 2 Score: 69.707 bits (169), Expect = 8.628e-12
Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKS 154
            K+FVGGLS +T  E +  YF QFG+V D ++M +  + R RGFGFVTF     ++ V     H ++ + ++ K   P+ +  P  S
Sbjct:  110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|51316207|sp|Q61474.1|MSI1H_MOUSE (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 173.711 bits (439), Expect = 1.045e-48
Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            K+F+GGLSW T QE L  YFGQFGEV +C+VM++  + RSRGFGFVTF D A +D VLA S H LD +TIDPK   PR  Q PK   V    K+F+GGL  N T  D++ +F  +G+V + ++M+D+   + RGFGF++F  +    K    H+  I +K VE K+A+P+
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ-PKM--VTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187

HSP 2 Score: 69.3218 bits (168), Expect = 1.381e-11
Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKS 154
            K+FVGGLS +T  E +  YF QFG+V D ++M +  + R RGFGFVTF     ++ V     H ++ + ++ K   P+ +  P  S
Sbjct:  110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|51316134|sp|Q8K3P4.1|MSI1H_RAT (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 173.711 bits (439), Expect = 1.124e-48
Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            K+F+GGLSW T QE L  YFGQFGEV +C+VM++  + RSRGFGFVTF D A +D VLA S H LD +TIDPK   PR  Q PK   V    K+F+GGL  N T  D++ +F  +G+V + ++M+D+   + RGFGF++F  +    K    H+  I +K VE K+A+P+
Sbjct:   21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQ-PKM--VTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187

HSP 2 Score: 69.3218 bits (168), Expect = 1.406e-11
Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 0

Query:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKS 154
            K+FVGGLS +T  E +  YF QFG+V D ++M +  + R RGFGFVTF     ++ V     H ++ + ++ K   P+ +  P  S
Sbjct:  110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS 195

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE (RecName: Full=RNA-binding protein Musashi homolog 2; Short=Musashi-2)

HSP 1 Score: 167.548 bits (423), Expect = 1.606e-46
Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 0

Query:   68 GKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            GK+F+GGLSW T+ +SL  YF +FGE+ +C+VM++  + RSRGFGFVTFADPA++D VL    H LD +TIDPK   PR  Q PK   V    K+F+GGL  N    D++ +F  +G+V + ++M+D+   + RGFGF++F ++    K    H+  I +K VE K+A+P+
Sbjct:   21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQ-PKM--VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Match: gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN (RecName: Full=RNA-binding protein Musashi homolog 2; Short=Musashi-2)

HSP 1 Score: 166.777 bits (421), Expect = 1.982e-46
Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 0

Query:   68 GKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR 238
            GK+F+GGLSW T+ +SL  YF +FGE+ +C+VM++  + RSRGFGFVTFADPA++D VL    H LD +TIDPK   PR  Q PK   V    K+F+GGL  N    D++ +F  +G+V + ++M+D+   + RGFGF++F ++    K    H+  I +K VE K+A+P+
Sbjct:   21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQ-PKM--VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 188

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1325309572|ref|XP_023336397.1| (heterogeneous nuclear ribonucleoprotein 27C-like [Eurytemora affinis])

HSP 1 Score: 328.561 bits (841), Expect = 4.362e-105
Identity = 182/315 (57.78%), Postives = 213/315 (67.62%), Query Frame = 0

Query:   54 RIQGKKH-RHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASPTPNGHAAPAPAGFSGWGAPPGAP--------PAPATAYPAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAP 359
            R Q +KH +HEDEE GK+FVGGLSW+TAQ++LL YF +FGEVIDCVVMKN E+GRSRGFGFVTF+DP+NID+V+ S PH LDGRTIDPK CNPRS QKPKK+    +PKVFLGGLP +ITETDLR+FFS YGEV+EVVIMYDQEKKK+RGFGFLS+  + A   AV+EHYV I++KQVE+KRAEPRTN    N   +  VDQWG P Q     NG  A     +SGWGAPP  P        P   T  P  + +P     +H WG  PP        A H   YAP A   PSH  H  G+       +P PAP
Sbjct:   12 RGQSRKHNKHEDEEAGKVFVGGLSWETAQDNLLRYFSRFGEVIDCVVMKNAETGRSRGFGFVTFSDPSNIDSVIQSCPHTLDGRTIDPKPCNPRSAQKPKKNTT--WPKVFLGGLPSSITETDLRAFFSRYGEVMEVVIMYDQEKKKARGFGFLSYTTEDAVDLAVAEHYVNIQNKQVEIKRAEPRTNISELNNGPL--VDQWGTPAQNG-VHNGAQAQVTPTYSGWGAPPTLPPPVTQNFTPTAFTVGPGHWGTPPVSQQSHGWGAPPP--------AQHHNSYAPLA---PSHPIHYNGHHF----ISPNPAP 306

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1101358093|ref|XP_018905265.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform X4 [Bemisia tabaci])

HSP 1 Score: 303.523 bits (776), Expect = 2.886e-95
Identity = 168/329 (51.06%), Postives = 201/329 (61.09%), Query Frame = 0

Query:   55 IQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPR-TNPVSHNGTKMQSVDQWGMPP-----------------------QASPTPNGHAAPAPAGFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWG--PGPP-QHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQ 356
            ++GK    EDE  GKLFVGGLSW+T QE+L  YF ++GEVIDCVVMKN ESGRSRGFGFVTF+DPAN+  VL + PH LDGRTIDPK CNPR++QKPK+S    +PKVFLGGLP N+TETDLRS+FS +G+V+EVVIMYDQEKKKSRGFGFLSF D+ A  + V+EH+V +  KQVE+K+AEPR +N +  NG       QW  PP                             +        G+ GWG+ P         YPA Y +P  P     WG  PGP  Q  APPQW    ++Y  P        P Q GY  Y A  TPQ
Sbjct:    1 MRGKNDLEEDES-GKLFVGGLSWETQQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVAIVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSAS--YPKVFLGGLPSNVTETDLRSYFSRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNMSGKQVEIKKAEPRDSNKMGDNGV----AGQWAPPPTGHGMAMGGGMGMGNPSGQMSGGPMGGMGHMGPGNMMQGYQGWGSTP-----QTGGYPAGYGTPSGPQGYQGWGAPPGPQGQQMAPPQWG---SNYGAP--------PQQTGYGSYGAQATPQ 306

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|328724864|ref|XP_001951157.2| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C isoform X1 [Acyrthosiphon pisum] >gi|985399302|ref|XP_015367264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform X1 [Diuraphis noxia] >gi|1229886511|ref|XP_022163513.1| heterogeneous nuclear ribonucleoprotein 27C-like isoform X1 [Myzus persicae])

HSP 1 Score: 301.212 bits (770), Expect = 2.582e-94
Identity = 177/350 (50.57%), Postives = 211/350 (60.29%), Query Frame = 0

Query:   55 IQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSV--DQWGMPPQASPTPNGHAAPAPA--------------------------GFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWG--PGPPQHG-APPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAPPSAPPPHHSYWSSP 373
            ++GK    EDE QGKLFVGGLSW+T QESL  YF ++GEVIDCVVMKN ESGRSRGFGFVTFADP N++ VL + PH LDGRTIDPK CNPR++QKPK+S+   +PKVFLGGLP N+TETDLR+FFS YG+V+EVVIMYDQEKKKSRGFGFLSF DD A  + V+EH+V +  KQVE+K+AEPR      +  KM  V  +QWGM        N H A                              G+ G     G    P + YP  Y +P  P     WG  PGP   G APP W    ++YAP         P QPGY  Y     PQ APP +   ++  W+ P
Sbjct:    1 MRGKSDLEEDE-QGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSS--YPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPR------DSNKMNDVGANQWGM------NQNNHLAMGGMGMGGPGGQMGGPMGGMGPMGPGNMMQGYQG-----GWSSTPQSQYPG-YGTPSGPGGFQGWGAPPGPQGQGMAPPTWG---SNYAP---------PQQPGYGSY----APQ-APPQSSYGNNWNWNIP 312

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|478254705|gb|ENN74946.1| (hypothetical protein YQE_08523, partial [Dendroctonus ponderosae])

HSP 1 Score: 299.286 bits (765), Expect = 2.890e-94
Identity = 176/352 (50.00%), Postives = 206/352 (58.52%), Query Frame = 0

Query:   58 KKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVD---QWGMPPQA----SPTPNGHAAPAPA------------GFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAPPSAPP---PHHSYWSSPGHPQPPPPTHDPYG 387
            K    +D+E+GKLFVGGLSW+T Q++L  YF ++GEVIDCVVMKN ESGRSRGFGFVTFADPAN++ VL + PH LDGRTIDPK CNPR++QKPKK     +PKVFLGGLP N+TETDLRSFF+ +G+V+EVVIMYDQEKKKSRGFGFLSF DD A  + VSEH+V +  KQVE+K+AEPR       G KM   D    WG PPQA       PNG     P             G+ GWG       +P   Y A Y +P  P     WG  P   G PPQW    ++  PP         +     VY        A PS PP   P     S PG    P      YG
Sbjct:    5 KHEMMDDDEKGKLFVGGLSWETTQDNLQRYFSRYGEVIDCVVMKNAESGRSRGFGFVTFADPANVNVVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGG--YPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDDEAVDRCVSEHFVNLNGKQVEIKKAEPRD---GSGGNKMGGSDGSSAWG-PPQAPLGMMQGPNGQMGGPPMNMGAPMGPNMNQGYLGWGT------SPQQQYNAGYGTPSGPGSYQGWGAPPAPQGPPPQWG--NSYGGPPTQQGYGSYGYMATGDVYSRGGQSAAANPSGPPGTAPSAGTASKPGSDYGPASYGSAYG 342

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|328724866|ref|XP_003248272.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C isoform X2 [Acyrthosiphon pisum] >gi|985399304|ref|XP_015367265.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform X2 [Diuraphis noxia] >gi|1229886513|ref|XP_022163514.1| heterogeneous nuclear ribonucleoprotein 27C-like isoform X2 [Myzus persicae])

HSP 1 Score: 300.827 bits (769), Expect = 2.944e-94
Identity = 177/350 (50.57%), Postives = 211/350 (60.29%), Query Frame = 0

Query:   55 IQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSV--DQWGMPPQASPTPNGHAAPAPA--------------------------GFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWG--PGPPQHG-APPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAPPSAPPPHHSYWSSP 373
            ++GK    EDE QGKLFVGGLSW+T QESL  YF ++GEVIDCVVMKN ESGRSRGFGFVTFADP N++ VL + PH LDGRTIDPK CNPR++QKPK+S+   +PKVFLGGLP N+TETDLR+FFS YG+V+EVVIMYDQEKKKSRGFGFLSF DD A  + V+EH+V +  KQVE+K+AEPR      +  KM  V  +QWGM        N H A                              G+ G     G    P + YP  Y +P  P     WG  PGP   G APP W    ++YAP         P QPGY  Y     PQ APP +   ++  W+ P
Sbjct:    1 MRGKSDLEEDE-QGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSS--YPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPR------DSNKMNDVGANQWGM------NQNNHLAMGGMGMGGPGGQMGGPMGGMGPMGPGNMMQGYQG-----GWSSTPQSQYPG-YGTPSGPGGFQGWGAPPGPQGQGMAPPTWG---SNYAP---------PQQPGYGSY----APQ-APPQSSYGNNWNWNIP 312

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1130242766|ref|XP_019764029.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C isoform X5 [Dendroctonus ponderosae])

HSP 1 Score: 299.671 bits (766), Expect = 4.100e-94
Identity = 176/352 (50.00%), Postives = 206/352 (58.52%), Query Frame = 0

Query:   58 KKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVD---QWGMPPQA----SPTPNGHAAPAPA------------GFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAPPSAPP---PHHSYWSSPGHPQPPPPTHDPYG 387
            K    +D+E+GKLFVGGLSW+T Q++L  YF ++GEVIDCVVMKN ESGRSRGFGFVTFADPAN++ VL + PH LDGRTIDPK CNPR++QKPKK     +PKVFLGGLP N+TETDLRSFF+ +G+V+EVVIMYDQEKKKSRGFGFLSF DD A  + VSEH+V +  KQVE+K+AEPR       G KM   D    WG PPQA       PNG     P             G+ GWG       +P   Y A Y +P  P     WG  P   G PPQW    ++  PP         +     VY        A PS PP   P     S PG    P      YG
Sbjct:    7 KHEMMDDDEKGKLFVGGLSWETTQDNLQRYFSRYGEVIDCVVMKNAESGRSRGFGFVTFADPANVNVVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGG--YPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDDEAVDRCVSEHFVNLNGKQVEIKKAEPRD---GSGGNKMGGSDGSSAWG-PPQAPLGMMQGPNGQMGGPPMNMGAPMGPNMNQGYLGWGT------SPQQQYNAGYGTPSGPGSYQGWGAPPAPQGPPPQWG--NSYGGPPTQQGYGSYGYMATGDVYSRGGQSAAANPSGPPGTAPSAGTASKPGSDYGPASYGSAYG 344

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1067070184|ref|XP_018018445.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform X2 [Hyalella azteca])

HSP 1 Score: 298.901 bits (764), Expect = 6.224e-94
Identity = 167/318 (52.52%), Postives = 197/318 (61.95%), Query Frame = 0

Query:   62 HEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASPTPNGHAAPAPAGFS------GWGAPPGAPPAPATAY---PAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQ-----PAPPSAPPP 365
            H+ EEQGK+FVGGLSW++ Q++L  YFGQ+GEVIDCVVMKN E+GRSRGFGFVTFADP+ +D VL S PH LDGRTIDPKACNPRSMQK K+ N   +PKVFLGGLP N+TETDLR+FFS +G V+EVVIM+DQEKKKSRGFGFLSF  D A  +AV+EH+V I  KQVE+K+AEPR    S +G      DQWG PP +     G   P  AG +        G P G P  P  +    PA  ++         WG  P Q G PPQ        A   S        Q G P Y +  + Q        P AP P
Sbjct:   50 HDGEEQGKMFVGGLSWESTQDTLQRYFGQYGEVIDCVVMKNSETGRSRGFGFVTFADPSKVDLVLKSGPHELDGRTIDPKACNPRSMQKQKR-NGGNWPKVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFESDDAVERAVAEHFVNINGKQVEIKKAEPRDASKSQDGQ-----DQWGSPPDSQWGMPGMGPPGMAGINNGMGPGNMGPPLGHPLGPHNSQMGGPAAMSTGGMVQSYQGWGTPPAQQGYPPQGYAAAPQAAQYGSWGAGQQIQQWGTPSYGSAGSQQYGSFVAGAPGAPSP 361

HSP 2 Score: 65.855 bits (159), Expect = 5.682e-8
Identity = 38/148 (25.68%), Postives = 72/148 (48.65%), Query Frame = 0

Query:   11 RAGAVDLTTLCLLLRSNLMAQHHPHLVHPNGMVGPPPPGALHPRIQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQY 158
            R+      T     + +L+ +  PH +    +     P A +PR   K+ R+      K+F+GGL  +  +  L  +F +FG V++ V+M + E  +SRGFGF++F     ++  +A    +++G+ ++ K   PR   K +    Q+
Sbjct:   95 RSRGFGFVTFADPSKVDLVLKSGPHELDGRTI----DPKACNPRSMQKQKRNGGNWP-KVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFESDDAVERAVAEHFVNINGKQVEIKKAEPRDASKSQDGQDQW 237

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1130242759|ref|XP_019764027.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C isoform X3 [Dendroctonus ponderosae])

HSP 1 Score: 300.442 bits (768), Expect = 6.373e-94
Identity = 176/352 (50.00%), Postives = 206/352 (58.52%), Query Frame = 0

Query:   58 KKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVD---QWGMPPQA----SPTPNGHAAPAPA------------GFSGWGAPPGAPPAPATAYPAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQPAPPSAPP---PHHSYWSSPGHPQPPPPTHDPYG 387
            K    +D+E+GKLFVGGLSW+T Q++L  YF ++GEVIDCVVMKN ESGRSRGFGFVTFADPAN++ VL + PH LDGRTIDPK CNPR++QKPKK     +PKVFLGGLP N+TETDLRSFF+ +G+V+EVVIMYDQEKKKSRGFGFLSF DD A  + VSEH+V +  KQVE+K+AEPR       G KM   D    WG PPQA       PNG     P             G+ GWG       +P   Y A Y +P  P     WG  P   G PPQW    ++  PP         +     VY        A PS PP   P     S PG    P      YG
Sbjct:    7 KHEMMDDDEKGKLFVGGLSWETTQDNLQRYFSRYGEVIDCVVMKNAESGRSRGFGFVTFADPANVNVVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGG--YPKVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDDEAVDRCVSEHFVNLNGKQVEIKKAEPRD---GSGGNKMGGSDGSSAWG-PPQAPLGMMQGPNGQMGGPPMNMGAPMGPNMNQGYLGWGT------SPQQQYNAGYGTPSGPGSYQGWGAPPAPQGPPPQWG--NSYGGPPTQQGYGSYGYMATGDVYSRGGQSAAANPSGPPGTAPSAGTASKPGSDYGPASYGSAYG 344

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|1067070182|ref|XP_018018444.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform X1 [Hyalella azteca])

HSP 1 Score: 299.286 bits (765), Expect = 8.374e-94
Identity = 172/339 (50.74%), Postives = 204/339 (60.18%), Query Frame = 0

Query:   62 HEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASPTPNGHAAPAPAGFS------GWGAPPGAPPAPATAY---PAQYTSPQPPTHAHHWGPGPPQHGAPPQWAPHQTHYAPPASAPPSHVPHQPGYPVYQAPTTPQ-------------PAPPSAPPPHHSYWSSPGHPQP 378
            H+ EEQGK+FVGGLSW++ Q++L  YFGQ+GEVIDCVVMKN E+GRSRGFGFVTFADP+ +D VL S PH LDGRTIDPKACNPRSMQK K+ N   +PKVFLGGLP N+TETDLR+FFS +G V+EVVIM+DQEKKKSRGFGFLSF  D A  +AV+EH+V I  KQVE+K+AEPR    S +G      DQWG PP +     G   P  AG +        G P G P  P  +    PA  ++         WG  P Q G PPQ        A   S        Q G P Y +  + Q              A P + PPH     +PG P P
Sbjct:   50 HDGEEQGKMFVGGLSWESTQDTLQRYFGQYGEVIDCVVMKNSETGRSRGFGFVTFADPSKVDLVLKSGPHELDGRTIDPKACNPRSMQKQKR-NGGNWPKVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFESDDAVERAVAEHFVNINGKQVEIKKAEPRDASKSQDGQ-----DQWGSPPDSQWGMPGMGPPGMAGINNGMGPGNMGPPLGHPLGPHNSQMGGPAAMSTGGMVQSYQGWGTPPAQQGYPPQGYAAAPQAAQYGSWGAGQQIQQWGTPSYGSAGSQQYGSFGMVEGSSWGWASPPSTPPHLDMAGAPGAPSP 382

HSP 2 Score: 66.6254 bits (161), Expect = 3.619e-8
Identity = 38/148 (25.68%), Postives = 72/148 (48.65%), Query Frame = 0

Query:   11 RAGAVDLTTLCLLLRSNLMAQHHPHLVHPNGMVGPPPPGALHPRIQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQY 158
            R+      T     + +L+ +  PH +    +     P A +PR   K+ R+      K+F+GGL  +  +  L  +F +FG V++ V+M + E  +SRGFGF++F     ++  +A    +++G+ ++ K   PR   K +    Q+
Sbjct:   95 RSRGFGFVTFADPSKVDLVLKSGPHELDGRTI----DPKACNPRSMQKQKRNGGNWP-KVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFESDDAVERAVAEHFVNINGKQVEIKKAEPRDASKSQDGQDQW 237

[Close]

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Match: gi|157118269|ref|XP_001653144.1| (heterogeneous nuclear ribonucleoprotein 27C [Aedes aegypti] >gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex subunit HRP1 [Aedes aegypti] >gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti])

HSP 1 Score: 298.516 bits (763), Expect = 1.005e-93
Identity = 147/239 (61.51%), Postives = 173/239 (72.38%), Query Frame = 0

Query:   51 LHPRIQGKKHRHEDEEQGKLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVTFADPANIDAVLASSPHHLDGRTIDPKACNPRSMQKPKKSNVQYFPKVFLGGLPPNITETDLRSFFSHYGEVIEVVIMYDQEKKKSRGFGFLSFADDVACSKAVSEHYVMIKDKQVEVKRAEPRTNPVSHNGTKMQSVDQWGMPPQASPTPNGHAAPAPA--------GFSGWGA 281
            +HP  +      +D E+GKLFVGGLSW+T QE+L  YFG++GEVIDCVVMKN E+GRSRGFGFVTFADP N+D  L + PH LDGRTIDPK CNPRS+ KPK++    +PKVFLGGLPPNITETDLRSFFS YG V+EVVIMYDQEKKKSRGFGFLSF ++ A  +A +EH+V I  KQVE+K+AEPR    ++N     S  QWG  PQA P  NG     P         G+ GWGA
Sbjct:    1 MHPSKKMNAAELDDHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALENGPHTLDGRTIDPKPCNPRSLHKPKRTGG--YPKVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPRDGSGNNNSMNADSY-QWG-SPQAPPMGNGQMGGPPINMQSNMMQGYQGWGA 235

The following BLAST results are available for this feature:

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr

BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 24


Match Name	E-value	Identity	Description
EMLSAG00000006441	1.588e-110	75.24	supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1...	[more]
EMLSAG00000007863	5.396e-42	41.14	supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1...	[more]
EMLSAG00000000160	4.547e-33	38.33	supercontig:LSalAtl2s:LSalAtl2s1025:101799:103083:...	[more]
EMLSAG00000005340	5.371e-28	40.00	supercontig:LSalAtl2s:LSalAtl2s287:281236:323990:-...	[more]
EMLSAG00000001242	1.024e-26	35.91	supercontig:LSalAtl2s:LSalAtl2s1202:105888:108177:...	[more]
EMLSAG00000007356	7.649e-26	33.52	supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-...	[more]
EMLSAG00000005517	4.434e-22	29.55	supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-...	[more]
EMLSAG00000012985	4.927e-18	34.72	supercontig:LSalAtl2s:LSalAtl2s98:287705:288759:1 ...	[more]
EMLSAG00000008061	1.197e-17	30.86	supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1...	[more]
EMLSAG00000006940	1.177e-15	51.61	supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-...	[more]

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|76803817\|sp\|P48809.2\|RB27C_DROME	4.554e-84	65.57	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|44887872\|sp\|Q9JII5.2\|DAZP1_MOUSE	3.001e-61	47.19	RecName: Full=DAZ-associated protein 1; AltName: F...	[more]
gi\|44887869\|sp\|Q96EP5.1\|DAZP1_HUMAN	3.967e-61	52.97	RecName: Full=DAZ-associated protein 1; AltName: F...	[more]
gi\|44887870\|sp\|Q98SJ2.1\|DAZP1_XENLA	1.232e-60	46.55	RecName: Full=DAZ-associated protein 1; AltName: F...	[more]
gi\|74676196\|sp\|O94432.1\|YHKF_SCHPO	3.327e-49	44.57	RecName: Full=Uncharacterized RNA-binding protein ...	[more]
gi\|51316193\|sp\|O43347.1\|MSI1H_HUMAN	5.760e-49	47.65	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316207\|sp\|Q61474.1\|MSI1H_MOUSE	1.045e-48	47.65	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316134\|sp\|Q8K3P4.1\|MSI1H_RAT	1.124e-48	47.65	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316506\|sp\|Q920Q6.1\|MSI2H_MOUSE	1.606e-46	45.03	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316513\|sp\|Q96DH6.1\|MSI2H_HUMAN	1.982e-46	45.03	RecName: Full=RNA-binding protein Musashi homolog ...	[more]

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BLAST of heterogeneous nuclear ribonucleoprotein 27c-like isoform x3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325309572\|ref\|XP_023336397.1\|	4.362e-105	57.78	heterogeneous nuclear ribonucleoprotein 27C-like [...	[more]
gi\|1101358093\|ref\|XP_018905265.1\|	2.886e-95	51.06	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|328724864\|ref\|XP_001951157.2\|	2.582e-94	50.57	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|478254705\|gb\|ENN74946.1\|	2.890e-94	50.00	hypothetical protein YQE_08523, partial [Dendrocto...	[more]
gi\|328724866\|ref\|XP_003248272.1\|	2.944e-94	50.57	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|1130242766\|ref\|XP_019764029.1\|	4.100e-94	50.00	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|1067070184\|ref\|XP_018018445.1\|	6.224e-94	52.52	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|1130242759\|ref\|XP_019764027.1\|	6.373e-94	50.00	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|1067070182\|ref\|XP_018018444.1\|	8.374e-94	50.74	PREDICTED: heterogeneous nuclear ribonucleoprotein...	[more]
gi\|157118269\|ref\|XP_001653144.1\|	1.005e-93	61.51	heterogeneous nuclear ribonucleoprotein 27C [Aedes...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold141_size315519	supercontig	scaffold141_size315519:77536..79466 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold141_size315519-snap-gene-0.13-mRNA-1	maker-scaffold141_size315519-snap-gene-0.13-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold141_size315519:77536..79466+

gene from alignment at scaffold141_size315519:77536..79466+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold141_size315519-snap-gene-0.13 ID=maker-scaffold141_size315519-snap-gene-0.13|Name=heterogeneous nuclear ribonucleoprotein 27c-like isoform x3|organism=Tigriopus kingsejongensis|type=gene|length=1931bp|location=Sequence derived from alignment at scaffold141_size315519:77536..79466+ (Tigriopus kingsejongensis)
ATGACCGTGTCAGCTTCGGGGCTGGACGTCCGAGCTGGGGCCGTTGATTT
GACTACTCTCTGCTTACTTTTAAGGTGTTCTAACCCGACAGACTGCGGAT
CGCCTCACAACTACTACTACTACTACTACTACTACTACTACTACTTCTAA
GTTACTACATTGATGGCTTACTTCTATTCTAAGGGCTTAGAATAAGGCAT
AACACAGTATTGATCGTATCGCTCGAGTGGTAAGTGTTCATGCCGAGCCG
GCCGTCGCTCGGGTTCGTGCGCGCGTTGGAGCGTCAGGCCGAGTCCGGGT
CCTAGTTTTAATCCGTTCGCTACTCCCCGCCTCACCCCTAGCCCGACTCG
CTAACCTCGTCTTTGTCCCACCAGATCGAATCTCATGGCCCAACACCACC
CGCATCTCGTCCACCCCAATGGGATGGTGGGTCCCCCGCCGCCTGGCGCG
CTCCACCCCCGGATCCAGGGCAAGAAACACCGTCATGAGGATGAGGAGCA
AGGCAAGCTCTTTGTGGGCGGTCTCAGGTGAGTGTAGCCACGTGGAATTC
CTCCGGTGCCCTGGAATTGGTCTAATTGCCTGGTTTAATCGCGTAGTTGG
GATACGGCCCAAGAGAGCTTGTTGGCCTACTTTGGCCAGTTCGGCGAAGT
GATCGATTGCGTGGTCATGAAGAACTTGGAAAGCGGTCGCTCGCGCGGAT
TTGGGTTCGTGACCTTCGCGGATCCAGCCAATATCGACGCGGTTCTGGCC
AGCAGTCCTCATCATCTGGATGGGCGGACCATCGACCCCAAAGCGTGTAA
TCCGCGTAGCATGCAGAAGCCAAAGAAGTCCAATGTCCAATATTTTCCCA
AGGTAAAATATCCGGCTATCCGCCCTGAACCTAGCTGGGCAGTCTGAAAT
CGATTGCGGAAAGCTAGGCCAGCCGTGGGGCGGACGGAGCTAGTACAGTC
CGACTCGGCCACCGTCTGGGCTTGATCGCTAATTGGCCAGCTTCTCTCTC
TCTCTCTCTCTCGCTCTTGACGTAGGTGTTTCTCGGCGGACTCCCGCCCA
ATATCACGGAAACGGACCTGCGGAGCTTCTTCAGCCACTATGGGGAGGTG
ATCGAGGTGGTGATCATGTACGATCAGGAGAAGAAAAAGAGTCGCGGTTT
CGGCTTTCTGAGCTTCGCCGACGACGTGGCCTGTTCCAAGGCTGTCAGTG
AGCATTATGTCATGATCAAAGACAAGCAGGTCGAAGTCAAGCGAGCCGAG
CCTAGGACCAACCCGGTCAGTCACAATGGGACCAAGATGCAATCCGTAGA
TCAATGGGGGATGCCACCTCAGGCTAGTCCCACCCCCAATGGGCATGCAG
CACCCGCGCCCGCCGGGTTTTCGGGCTGGGGGGCACCCCCAGGGGCTCCA
CCGGCGCCGGCCACGGCTTATCCCGCTCAATACACCAGCCCACAGCCCCC
GACTCACGCCCATCATTGGGGCCCGGGGCCACCTCAGCATGGAGCCCCAC
CCCAATGGGCGCCCCATCAGACCCATTACGCTCCACCGGCGAGCGCACCA
CCTTCCCACGTCCCACATCAGCCGGGATATCCCGTGTATCAGGCTCCCAC
CACACCTCAACCGGCGCCCCCCAGTGCCCCGCCGCCCCACCACAGCTACT
GGTCCAGCCCGGGACACCCCCAGCCCCCGCCCCCTACCCATGATCCCTAC
GGCCCCAAGCCGGCGGAATACCACCACTCCCCGTATGCTCAGCCACAGCA
GCAGCAGCCCCACTCCTACCCTTTTGCGCCACAGCAACCCAAGATGCCGC
AGCCTGGACAGGCCTATCATCCCCAGCCTGGCTCGGGCCATCCGGAGTTC
TACCCTCACGCAACGAGTCCTCCGGGTCCCTACGGCACGCAGCCCCCCAC
TGACCTCACTGCCAGTCTCGGGCCTCAGCGA

Synonyms

The feature 'heterogeneous nuclear ribonucleoprotein 27c-like isoform x3' has the following synonyms


Synonym
Tk03982

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