atp-dependent rna helicase, maker-scaffold14_size734282-snap-gene-2.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000991 (supercontig:LSalAtl2s:LSalAtl2s116:1961290:1963414:1 gene:EMLSAG00000000991 transcript:EMLSAT00000000991 description:"maker-LSalAtl2s116-augustus-gene-19.39") HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0 Identity = 326/637 (51.18%), Postives = 430/637 (67.50%), Query Frame = 0 Query: 55 QDFISSLFNHNPDIPQLE--AGQVEPL-HEAVFTGHGFDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQM--EGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTA-----MTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGL------LLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLL-LVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGK-GHWVDNEERKKRN--LKREEHMIKAQKKRINQKSLIVSEYSSGLDGIESTPAPVKK 671 Q+ IS LF NP+IP L+ + L E++F+ FD GIHP+++KNL G+ R T VQ+ IP ILAG+D L+K QTGSGK LA A+P+LH LQAI P++ R G FA IVPG+L GGEK+KSEKAR+RKG+NILVSTPGRL+DHI T+ L L ++ +LV DEADRML+LGYERDV II AI+E E RQT+LLSATLT GI QLSEVS+KHP +D ++ N +++ P+ L+Q F++VPAKLRL++L+SFILWKC + +K+LIF++TQDMVD+H LF+ +L + + I +KLHGNM+Q ER+ VF FRE ++G+ LLCTDVAARGLDLP+VDWIVQYNPP S ADYVHR+GRTARIG KGSSL+F+LPSE F+ E+E + L VE+T+D+VL+K+F P R +LE+AAT+LQ++ME+LI+ +L + +QAYVSFIRSYASYP+E R +FCFK+LHLGHIAKSF LRD P++ITGIGK G+W+ +E +K+N +KRE+ ++K+Q+KRI+Q++LI+SEYSSG D ++ P P KK Sbjct: 58 QEVISGLFTGNPNIPSLDNLGNSKDSLPQESLFSQSQFDGHGIHPYIIKNLDSMGISRPTAVQSATIPRILAGKDVLVKXQTGSGKXLAXALPLLHSLQAITPQIHRDSGFFA-------------------------RIVPGVLHGGEKRKSEKARLRKGLNILVSTPGRLLDHIHKTKTLDLSKIHYLVFDEADRMLDLGYERDVNDIINAISENSSEEIKRQTILLSATLTQGIRQLSEVSLKHPDYVDITSTDGNSVMAISDDLQVDTAVPENLQQTFIVVPAKLRLITLSSFILWKCGGKSMKKILIFLATQDMVDYHHTLFEQSLYSEEGKN--------------------------------IKFMKLHGNMDQGERTKVFNDFREIDSGVISSGLVLLCTDVAARGLDLPKVDWIVQYNPPISTADYVHRIGRTARIGLKGSSLLFVLPSETGFLHEVENQKLARFVELTVDRVLEKVF-------PSDKR--RSLEQAATNLQLKMETLIVEDSQLKEMGSQAYVSFIRSYASYPKEVRHLFCFKDLHLGHIAKSFGLRDAPTKITGIGKSGNWLKKQELRKKNAFIKREDRVVKSQRKRIDQRALIMSEYSSGFDDMDEKP-PSKK 627
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000002659 (supercontig:LSalAtl2s:LSalAtl2s153:555306:559625:1 gene:EMLSAG00000002659 transcript:EMLSAT00000002659 description:"maker-LSalAtl2s153-augustus-gene-5.7") HSP 1 Score: 261.151 bits (666), Expect = 1.768e-78 Identity = 169/554 (30.51%), Postives = 290/554 (52.35%), Query Frame = 0 Query: 68 IPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLL----DAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSM-KHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARI-GAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGI 615 +P + G V L + FT + H+ N L D G +MT++QA IP +L G+D + ++TGSGKTL++ +P + + + K + +G +++ PTREL++Q+F +++L + + G+++GG + +E ++ KGINI+V+TPGRL+DH+++T+ K L L++DEADR+L++G+E +++ II + ++ RQT+L SAT T E L ++++ K P I + +N A +++ L+Q ++I P++ RL+ L +F+ + +K+++F S+ V +H ELF +++ + + +HG Q++R++ F +F A++G+LLCTDVAARGLD+P VDWIVQY+P +Y+HRVGRTAR G KG +L+ L P E F+R L ++ L E +D+Q ++E LI L+ A +A+ ++ +Y S+ + IF + L L + KS PP G+ Sbjct: 103 LPGSKLGAVGILSDKSFTS-------LKEHICDNTLNGIQDMGFSQMTEIQAQTIPHLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKL--KFMPRNGTGVIIISPTRELSMQTFGVLRELLK-YHCHTYGLVMGGANRNTEAQKLNKGINIVVATPGRLLDHLRNTKDFLYKNLQCLIIDEADRILDVGFEEEMKKIIQLLPKK----RQTMLFSATTTKKTEDLVKLALKKEPIYIGIDSANDNGAATVSG------LEQGYVICPSEKRLLLLFTFLKK----NRKKKVMVFFSSCMSVKYHHELF---------------------------------------NYIDLPVQSIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPDVDWIVQYDPTDDPKEYIHRVGRTARGEGGKGHALLILRPEEVGFLRYLRQANVPLNEFEFSW------------------------SKVSDIQPQLEKLISKNYFLNASAKEAFKGYVXAYESHSL--KQIFNVQTLDLKAVGKSLGFVSPPHIDIGV 567
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000007706 (supercontig:LSalAtl2s:LSalAtl2s449:21910:24507:-1 gene:EMLSAG00000007706 transcript:EMLSAT00000007706 description:"maker-LSalAtl2s449-snap-gene-0.33") HSP 1 Score: 213.001 bits (541), Expect = 2.533e-59 Identity = 159/522 (30.46%), Postives = 255/522 (48.85%), Query Frame = 0 Query: 89 FDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPP 609 F + + +K L + TQ+Q +I + G D L ++TG GKTLA+ +PIL L R K + DG ALV+ PTRELA Q FE ++K+ + + G+++GG+ + E R+ NI++ TPGRL+ H+ L LVLDEADR L+LG+ + AI+ + ++ RQTLL SAT T I+ L +S+K+P VS H++ +TP++L Q +++ ++ L SFI + K L+F+ + + EL +K V + +L L+G ++Q R S+++ F +E + +L TD+AARGLD P+VDW+ Q + P Y+HRVGRTAR + G SL+ L PSE E +L ++++ +V + V+PK T QM++E+ + L + A +A+ S+I+S Y +++ IF ++ A+S L P Sbjct: 104 FRDMPLSAYTLKGLKENNYDEPTQIQKESIGLCFRGSDVLGAAKTGCGKTLAFVIPILELLH--REKWTKLDGLGALVITPTRELAYQIFETLRKVGKHHEF-SAGLVIGGKDLQYETKRL-STCNIVICTPGRLLQHMDENPQFDPITLQILVLDEADRCLDLGFAETMNAILGNLPKE----RQTLLFSATQTRSIKDLGRLSLKNP----VYVSIHEHSK----FSTPEKLTQNYMVCELDKKMDMLLSFI----KSHRKSKTLVFVQSCKQARYFQELL-------------------------------------KKIRVGVSVLGLYGTLHQLRRMSIYEEFCQEENSMVLFATDIAARGLDFPKVDWVFQLDCPEDGKTYLHRVGRTARHASIGKSLMLLTPSE---------EEGMLKQLSIHRVP----IERIEVNPK----------KLTTCQMKIEANLAGDNNLKEMAQRAFQSYIKSI--YLMKNKAIFDVFQIETDTYARSLGLVVTP 543
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 189.504 bits (480), Expect = 2.181e-53 Identity = 126/418 (30.14%), Postives = 212/418 (50.72%), Query Frame = 0 Query: 89 FDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELE 506 F G+ L + G +++Q AIPV L G+D + ++TGSGKT A+A+P+L L L + FALV+ PTRELA Q E +KL ++ + +L+GG S+ + K +I+++TPGRLIDH+++T+ L+ L +L++DEADR+L + +E +V I++A+ + EG R+ +L SAT+T + +L S++ P ++ + + T D+L Q +L +P K + + L I ++ +F +T + K L + T + L+G M+Q++R + +F+ +L+ TDVA+RGLD+P VD ++ Y+ PT DY+HRVGRTAR G G ++ F+ + + +E Sbjct: 26 FSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVLQSL------LEKPQRFFALVLTPTRELAYQISEQFEKLGKSI-GVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSAL-PRGEG-RKNMLFSATMTKKVAKLQRASLRDPVRVEVS----------SKYQTVDKLLQYYLFIPLKYKEMYLVHII------------------NELAGNSFIIFSSTCSGTLKLALLLRNLGFTA-------------------------IPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIE 381
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000010227 (supercontig:LSalAtl2s:LSalAtl2s679:403636:405959:-1 gene:EMLSAG00000010227 transcript:EMLSAT00000010227 description:"maker-LSalAtl2s679-augustus-gene-3.17") HSP 1 Score: 191.815 bits (486), Expect = 4.007e-53 Identity = 150/531 (28.25%), Postives = 257/531 (48.40%), Query Frame = 0 Query: 104 DAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGM------------LLGGEKKKSEKARVRKGINILVSTPGRLIDHIQ-HTECLS----------LKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIV--PAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPP 609 D +MT +QA AIP+ L +D ++ TGSGKTLA+ +PIL L + + AL++ PTRELA Q I ++ F +P + +G +K EK +G I+++TPGRL D + TE ++ K L+LDEADR+L LG+E + II+ + +Q R+T L SAT T +++L +++P L+ + H + ++TP +L ++ PAK + +L F+ + + +K ++F ST V++ + L + L + + P+ LHG + R +F +F++ + G+L+CTDV +RG+D P V+W+VQ++ P + +VHR+GRTAR GA G++L+ LLP+E ++I + + +D D + TG P TL + + +L +L ++ +A+VS++R+Y+ + E + I K+L G +A ++ L P Sbjct: 30 DLKFKKMTPIQAXAIPLFLGLKDVCAEAVTGSGKTLAFVIPILEILLNSSNEESKVHDIGALILSPTRELASQ----ISQVLEVFLSKIPSLNSLLIIGGGGSSSVGETLRKFEK----EGAKIIIATPGRLEDILTGKTESINQLKAEKMARGFKSTKILILDEADRLLRLGFETAINTIISFLPKQ----RRTSLFSATQTKDLDELIRAGLRNPVLVKV----KEHGKE-NELSTPIKLTNYYMKCDPPAK-KFATLLKFLKTE---AAGKKTMVFFSTCACVEYFSTLLERFL---------------------------------KDDNTPV--FALHGQKGGT-RFKIFDKFKKLDMGVLVCTDVLSRGVDFPDVEWVVQFDAPKTAEAFVHRIGRTARSGAVGNALLLLLPTEDSYI------DFIKINQKVD---------FDKMEVITGL-PKTLP--------VIRNWLLHDRDLMEKGIKAFVSYVRAYSKH--ECKYILKVKDLPFGELASAYGLLKMP 477
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30") HSP 1 Score: 179.489 bits (454), Expect = 5.731e-48 Identity = 129/465 (27.74%), Postives = 230/465 (49.46%), Query Frame = 0 Query: 76 VEPLHEAVFTGH-GFDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHP-KLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK------CRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANF----IRELEGESLLLVEMTLDQVLKKLFMNN 528 V P GH GFD+ L+K++ + + T +Q++ IPV L+G+DA+ ++TGSGKT + PI+ +Q RP L+ G+G AL++VPTRELA+Q + +K + + GG K + K G I ++TPGR+ID I+ + +L+R+ +LVLDEADRM ++G+E V++I + + RQTLL SAT +E+L+ + P K++ ++ E +E +T + ++++ + W+ F+++ +LIF++ ++N A++L EF + +HG++NQ R+ + +F++ + +L+ TDVAARGLD+P + ++ Y+ + HR+GRT R G KG++ + + F +R LE + + + +D ++ + N Sbjct: 269 VSPPKPVTSFGHFGFDEV-----LLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRP-LLNGEGPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKC-FESGAEIAIATPGRMIDMIK-MKVTNLQRVTYLVLDEADRMFDMGFEAQVRSIC----DHVRPDRQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEA--SEDVTQI----------------VKVLEKGGY-KWEWVLQNLVEFTSAGSVLIFVT--------------------------KKLNCEELAQNLKLKEF-------------ECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQANQDVPKELMDLAMQSSWFKN 663
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30") HSP 1 Score: 177.563 bits (449), Expect = 6.323e-47 Identity = 124/465 (26.67%), Postives = 220/465 (47.31%), Query Frame = 0 Query: 55 QDFISSLFNHNPDIPQLEAGQVEPLHEAVFTG------------HGFDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHI--QHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIREL 505 Q F+ + + P++ ++ + +VE ++ G + AG+ ++ L G + T +Q AIP+I++G+D + ++TGSGKTLA+ +P+ + A +P+L GDG A+++ PTREL +Q + I+K +A + GG + A +++G I+V TPGR+ID + + +R+ ++VLDEADRM ++G+E V II + +Q ++ SAT +E L+ + P ++ V ++ D + Q+ ++ + + + L + + S+ ++IF+ Q+ D +L D S T A LHG ++Q +R S+ F+ + +L+ T VAARGLD+ ++ +V Y+ P DYVHR GRT R G G + FL P + + E+ Sbjct: 179 QPFVKNFYREVPELTKMTSDEVE-VYRLELEGIKVKGKNAPKPIKNWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMA-QPELEEGDGPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRII----DNCRPDKQMVMFSATFPRQMEALARRILCKP--VEVTVGGR-------SVVCKD-IDQSVYVLEEEHKFLKLLELLGQR---SSEGLIIIFVDKQEHAD-----------------------SLLKDLMSASYTSCAS---------------LHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEV 586
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39") HSP 1 Score: 169.088 bits (427), Expect = 1.070e-45 Identity = 121/408 (29.66%), Postives = 190/408 (46.57%), Query Frame = 0 Query: 89 FDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVP-GMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAV-SEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFL 494 F + G L++ + G T +QA P+ G++ + +TGSGKTL + +P L L P+ RGDG L++ PTRELA E I + F +P L+GG K+ + + +G I+V+TPGRLID ++ + + LKR ++VLDEADRML++G+E ++ I+ Q+ RQ L+ SAT + ++ L+ + S E A L + Q F ++ S+ IL S+K+LIF +T+ VD + + L N D +HG+ Q+ R+ +FR +L+ TDVA+RGLD+ + ++ Y+ P + DYVHR+GRT R +G S F Sbjct: 80 FQETGFPLGLIERIKSHGFEAPTAIQAQGWPIATNGKNIIAIGETGSGKTLGFVLPGLCHLMRXPPRRNRGDGPVVLIIAPTRELA----EQIHNVVDGFASKIPTACLVGGNHKQGQIRDLNRGAEIVVATPGRLIDLMEDGD-VDLKRCSYMVLDEADRMLDMGFEPQIRKIM----RQVRPDRQLLMWSATWPSEVQSLAHDFFGGTDYAHVNIGSSELXANKL--------IMQDFKFCERFEKMDSIKE-ILESLSEVESKKVLIFAATKIRVD--------------QLVRKLKYWNFVVDG-------------------------IHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSFF 430
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40") HSP 1 Score: 169.859 bits (429), Expect = 3.850e-45 Identity = 125/419 (29.83%), Postives = 196/419 (46.78%), Query Frame = 0 Query: 98 LVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRP-------KLVRGDG-AFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLI---DAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIREL 505 + N+ A + T VQ AIP I G+D + +QTGSGKT A+ VPIL+++ P K R AL++ PTRELA Q F+ +K + + P ++ GG + + +G ++LV+TPGRL+D + + +SL++ +LVLDEADRML++G+E ++ I+ N G RQTL+ SAT I+ L+ + + + + EN + + + D K++FL L L+ A S L+F+ T+ D E K P+ +HG+ Q ER +RFR +L+ T VAARGLD+P V ++ ++ P+ +YVHR+GRT R+G G + F N ++L Sbjct: 191 MANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPHSKNKRSKQYPMALILAPTRELATQIFDEAKKFAYR-SLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGK-ISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQRQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELD--KRSFL-----LDLLEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYL-------------------------------------YKEGFPV--TSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDL 561
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33") HSP 1 Score: 166.392 bits (420), Expect = 2.304e-43 Identity = 132/463 (28.51%), Postives = 208/463 (44.92%), Query Frame = 0 Query: 57 FISSLFNHNPDIPQLEAGQVEPLHE----AVFTGHG-------FDQAGIHPHLVKNLLDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVP-ILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLID--AAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIREL 505 F +N +P+I E VE + + GH F +AG +++K G R T +Q+ P+ L+G + + + TGSGKT Y +P I+H +P L GDG LV+ PTRELA Q E + R + I + GG K + + +G I+++TPGRLID ++ + ++++R +LVLDEADRML++G+E ++ II EQ+ RQ L+ SAT + +L+E + I+ AA NH D K+ L + +L + K+LIF+ T+ D T L + + P + +HG+ Q ER V F+ +L TDVAARGLD+ V +++ Y+ P + DY+HR+GRT R G++ + ++L Sbjct: 74 FEKHFYNPHPNILNAEKKTVEAYRDEKEITIVRGHNIPNPILDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNN--QPYLEEGDGPIVLVLAPTRELAQQIQEVASEFGRT-SRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGK-INMRRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDRQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKL------------ARLLEEIGCEPHNKILIFVETKRKADELTRLMRR--DGYPA-------------------------------------MCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDL 477
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|952543505|sp|Q6NZQ2.2|DDX31_MOUSE (RecName: Full=Probable ATP-dependent RNA helicase DDX31; AltName: Full=DEAD box protein 31) HSP 1 Score: 528.865 bits (1361), Expect = 4.034e-179 Identity = 278/619 (44.91%), Postives = 399/619 (64.46%), Query Frame = 0 Query: 59 SSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHP---KLIDAAVSEENHAE----SLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFAD--PQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKL-----FMNNDSVSPKT-GRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLDG 661 SSLF +NP+IP+L + V+ E VF+ F + +HPHL+ + M MT VQ +IPV+L G+DAL++SQTGSGKTLAY VP++ LQA+ K+ R DG +ALV+VPTRELA+QSF+ +QKL + FTWIVPG+L+GGEK+KSEKAR+RKGINIL+STPGRL+DHI+ T+ L R+ +L++DEADR+L+LG+E+D+ I+ A+N + + RQ +LLSATLT G+ +L ++S+ +P ++D ++ N E L + P+ L Q ++VP+KLRLV LA+FIL KC+F ++KM++F S+ ++V+FH LF TL L H GT ++ P + P+ L+LHGNM Q ER+SVF F +E G+LLCTDVA+RGLDLPQV WIVQY+ P+S A+Y+HR+GRTARIG GSSL+ L PSEA ++ L + + E+ ++ +L L F + K+ P + E AT LQ E + S + + A +A SFIR+YA+YP+E + IF + LHLGH+AKSF LRD P ++ +R +R++H++ A+ ++ SE+SSGL+G Sbjct: 75 SSLFKNNPEIPELHSTVVKQAREQVFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQ-KRQNVLLSATLTEGVTRLVDISLHNPVSISVLDKNCNQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKFEKNQKMIVFFSSCELVEFHYSLFLHTL--------------LCHS-----GTPTSEHLPSASW----PLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHVAKSFGLRDAPRNLSVSAVKKASLKRPHPRRKTQRKQHLVPAE--------VLHSEHSSGLEG 661
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|71153334|sp|Q9H8H2.2|DDX31_HUMAN (RecName: Full=Probable ATP-dependent RNA helicase DDX31; AltName: Full=DEAD box protein 31; AltName: Full=Helicain) HSP 1 Score: 524.628 bits (1350), Expect = 2.986e-175 Identity = 282/626 (45.05%), Postives = 396/626 (63.26%), Query Frame = 0 Query: 59 SSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLI-------------DAAVSE---ENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRP------PNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLDG 661 SSLF +NPDIP+L V+ + E VFT F + G+HPHL+ + M MT VQ +IPV+L G+DAL++SQTGSGKTLAY +P++ LQA+ K+ R DG +ALV+VPTRELA+QSF+ +QKL + FTWIVPG+L+GGEK+KSEKAR+RKGINIL+STPGRL+DHI+ T+ + RL +LV DEADR+L+LG+E+D+ I+ A+N + + RQ +LLSATLT G+ +L+++S+ P I D AV E + L + P+ LKQ +VP+KLRLV LA+FIL KC+F +KM++F S+ ++V+FH LF TL + P A L P + + + L+LHG M Q ER++VF+ F + G+LLCTDVAARGLDLPQV WIVQYN P+S A+Y+HR+GRTARIG GSSL+ L PSEA ++ L + + E+ ++ +L L ++ + G P + E AT LQ E + S E A +A SFI++YA+YPRE + IF + LHLGH+AKSF LRD P ++ + + +++K ++KR + K Q K + ++ SEYSSG++ Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQ-KRQNVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAP-----------ASGQL------PSASMR----LKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTR-------KKRKAHVKRPDLHKKTQSKH-SLAEILRSEYSSGMEA 797
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|74860578|sp|Q86B47.1|Y8611_DROME (RecName: Full=Probable ATP-dependent RNA helicase CG8611) HSP 1 Score: 460.299 bits (1183), Expect = 6.402e-149 Identity = 248/614 (40.39%), Postives = 374/614 (60.91%), Query Frame = 0 Query: 70 QLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDAGMVR-MTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTR-------QTLLLSATLTTGIEQLSEVSMKHPKLID-------AAVSEEN-------------------HAESLTA-MTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSR-KMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVP----IDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKK 643 QL V+P+ E +FTG G+HPH VKNL D +R +T VQ IP +L G+D L++SQTGSGKTLAYA+P++ LQ +P++ R DG ALV+VPTREL +Q++E IQKL + +TWIVPG LLGGE +KSEKAR+RKGINIL+ TPGRL+DH+ HT L +L FL+LDEADR+LELGYERDV+ ++ AI++Q Q +LLSATLT+ ++QL+ +++K+P ID AA+ ++ + E +T ++ P+ L+ ++++VP KLRLV+L+S + + S + K ++FMST +MV+FH ++ + L+R L + G D +P + KLHG+M Q+ER VF+ FR+ + +LL TDV RG+D+P + +VQY PP + AD+VHRVGRTAR G KG +++FL PSEA F+R LE + + + + + L+ L +D T++EAA++LQ + ++L+ ELH ++ +A+VS+++ Y+++P+E + IF + H+GH AKSFAL++ PS+ + +R+ I+AQK+ Sbjct: 310 QLGQRAVKPVKETIFTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLN----------EALTRRVLDEEDEQEKGDSDDD------GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLPKDDEA--------RTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAKSFALKEAPSKFAAKHAAPKAAPPTNRLTYTERDPEKIQAQKR 899
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|134034076|sp|A1CB55.1|DBP7_ASPCL (RecName: Full=ATP-dependent RNA helicase dbp7) HSP 1 Score: 381.719 bits (979), Expect = 2.857e-121 Identity = 247/693 (35.64%), Postives = 386/693 (55.70%), Query Frame = 0 Query: 20 RVKRPRPEVESTEEQPPGQKRSRGGE----EHHLADGTPQDFISSLFNHNPDIPQLEAGQVE-PLHEAVFTG-------HGFDQAGIHPHLVKNLLDAGMVRM-TQVQALAIPVILAGQ-DALIKSQTGSGKTLAYAVPILHKLQAI---------RPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGT--------RQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEEN------HAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK-CRFSTSRKMLIFMSTQDMVDFHTELF----QATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPS-EANFIRELE------GESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRIT--GIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLD 660 RV R ++E + +P ++R+ GG+ + H P+ FISSLF NP+ +E + E P+ EA T F G+ P L +LL ++ T +Q +I +L DA I+++TGSGKTLAY +P++ ++ + +P + R G FA+V+ PTREL Q ++ L R WIV G ++GGEKKKSEKAR+RKG+NILV+TPGRL DH+++T+ L + + +LVLDE DR++ELG+E ++Q I+ ++ + + R T+L SAT+ +++L E+S+K I A +E+ + E +A P +LKQ++ +V AKLRLV+L +++ R + K ++F+S D VDFH E+F Q T +A + L+ T F++P P+ L +LHG++ Q+ R+S F + E +L+CTDVA+RGLDLP VD +V+Y+P S D++HR+GRTAR+G G +L+FL+P E N++ L+ G++L V+ + +LK+ F N K + ATD Q +E L + + A +A+ S IR+YA++ R +F KELHLGH+AK+FALRD PS+I G+ +G +E K++ K E QK++ + + S+ SS D Sbjct: 57 RVPRNPNQIEVSATRPQKRQRTDGGDGGRPQSHAQSNQPRQFISSLFTKNPEPKNVEEVKEEGPVEEAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEDGDAFIQAETGSGKTLAYLLPLVQRIMTLSKPTTDATGQPIVHRDSGLFAIVLAPTRELCKQISVVLESLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIPTKRTTVLCSATMKMNVQKLGEISLKDAVHIKADPEDEDEKARLANKEEDSAYRVPAQLKQSYAVVAAKLRLVTLTAYLKRTFMRKGSVMKTIVFVSCADSVDFHFEVFTRKKQQTDDADASDEEKTEEKPLSPHGTIAPATAFSNPSN------PVTLYRLHGSLPQNVRTSTLASFAKNREPSVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGRDGRALVFLMPGCEENYVEILKRGYRDGGKALTRVDA--NDILKRGFGGNVEAGKK------DWDVKATDWQCEVERWSLENPQYLEMARRAFQSHIRAYATHIAAERSMFNIKELHLGHLAKAFALRDRPSKINVPGLRQG-----KEETKKDFKAERRPAAGQKRKADGADMGDSKSSSSHD 730
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|75327220|sp|Q7XJN0.1|RH17_ARATH (RecName: Full=DEAD-box ATP-dependent RNA helicase 17) HSP 1 Score: 372.089 bits (954), Expect = 2.737e-119 Identity = 228/602 (37.87%), Postives = 330/602 (54.82%), Query Frame = 0 Query: 72 EAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLD-AGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAI----NEQMEGT--------RQTLLLSATLTTGIEQLSEVSMKHPKL-------------IDAAVSEENHAESLTAMTT------------PDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPN-----TLEEA--ATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKK 628 EA +F F G+ L L + G T VQA AIPVIL+G+D L+ + TG+GKT+AY P++H LQ PK+ R G FALV+VPTREL +Q +E ++KL F WIVPG ++GGEKK EKAR+RKGI+IL++TPGRL+DH+++T K L +++ DEAD +LELGY ++++ II + NEQ E +Q LLLSATL + L+++S+ P + I++ + ++ AE + P +L Q +L VP RLV+L S + S+K+++F ST+D VDFH L LS ++ + + + T++ + +LHG+M Q +R S F F+ + +LL TDVAARGLD P+V I+QY+ P +YVHRVGRTARIG KG +L+FL P E ++++EL+ L E L +VL K P G P +LE LQ +ESL + ++ A A+VS++R YA++ E + IF K+LHLGH+AKSFALR+ PS +GK H + +RK+ Sbjct: 14 EAKDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFSTRDAVDFHYSL--------------LSEFQWPPNSET-------EEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKF--------PIPGNMPRIKKVLSLESHPWVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFALREQPSL---VGKSHHKETMKRKR 583
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|134034079|sp|A1DE84.1|DBP7_NEOFI (RecName: Full=ATP-dependent RNA helicase dbp7) HSP 1 Score: 375.555 bits (963), Expect = 8.534e-119 Identity = 247/689 (35.85%), Postives = 371/689 (53.85%), Query Frame = 0 Query: 16 EAVERVKRPRPEVESTEEQPPGQKRSRGGEEH------HLADGTPQDFISSLFNHNPDIPQLEA----GQVE---PLHEAVFTG-HGFDQAGIHPHLVKNLLDAGMVRM-TQVQALAIPVILAGQ-DALIKSQTGSGKTLAYAVPILHKLQAI-----------RPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGT--------RQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENH-----AESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK-CRFSTSRKMLIFMSTQDMVDFHTELF---QATLNAMPKRPKTLSRMNLTHDARSLL--GTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPS-EANFI----RELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRIT--GIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSL 650 ++ R R +E +P ++R+ GG+ H P+ FISSLF NP+ ++E G VE P + + G F G+ P L +LL ++ T +Q +I +L + DA I+++TGSGKTLAY +P++ ++ A+ +P + R G FA+V+ PTREL Q ++ L R WIV G ++GGEKKKSEKAR+RKG+NILV+TPGRL DH+ +T+ L + + +LVLDE DR++ELG+E ++Q I+ ++ + + R T+L SATL +++L E+S+K I A +E+ E +A P +LKQ++ +V AKLRLV+L +F R + K +IF+S D VDFH E+F QA + S + T F++P P+ L +LHG++ Q+ R+S F + EA +L+CTDVA+RGLDLP VD +V+Y+P S D++HR+GRTAR+G G +LIFL P E N++ R L + +LK+ F N K E ATD Q +E L E + A +A+ S IR+YA++ R +F KELHLGH+AK+FALRD PS+I G+ +G +E K++ K E + +K++ L Sbjct: 53 DSTPRAPRNPNRIEVPSSRPTKRQRTDGGDSGKQQSHTHPHSNQPRQFISSLFTKNPEPQKVEEVKEEGHVEDAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLVQRIMALSKPGAQTDAKGQPIVHRDSGLFAIVLAPTRELCKQISVVLENLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGVPTRRTTILCSATLKMSVQKLGEISLKDAVHIKADPEDEDEKARRSKEEESAYRVPAQLKQSYAVVAAKLRLVTLTAFFKRTFMRKGSVMKAIIFVSCADSVDFHFEVFTRKQAKEDGDESSDTDKSEDKPPSSPHGTIAPATAFSNPSN------PVTLFRLHGSLPQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGRDGRALIFLQPGCEENYVEVLKRGYRDGGKALTRADANDILKRGFGGNVESGNK------DWETKATDWQCEIERWALENPEYLEMARRAFQSHIRAYATHIAAERSMFNIKELHLGHLAKAFALRDRPSKINVPGLRQG-----KEETKKDFKAERNSAAGKKRKAGGTDL 724
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|74673411|sp|Q4WV71.1|DBP7_ASPFU (RecName: Full=ATP-dependent RNA helicase dbp7) HSP 1 Score: 374.015 bits (959), Expect = 3.253e-118 Identity = 248/697 (35.58%), Postives = 376/697 (53.95%), Query Frame = 0 Query: 16 EAVERVKRPRPEVESTEEQPPGQKRSRGGEEH------HLADGTPQDFISSLFNHNPDIPQL-----EAGQVE---PLHEAVFTG-HGFDQAGIHPHLVKNLLDAGMVRM-TQVQALAIPVILAGQ-DALIKSQTGSGKTLAYAVPILHKLQAI-----------RPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQ--------MEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENH------AESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK-CRFSTSRKMLIFMSTQDMVDFHTELFQ-----------ATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPS-EANFI----RELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRIT--GIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSL 650 ++ R R +E +P ++R+ GG+ H P+ FISSLF NP+ PQ E G VE P + + G F G+ P+L +LL ++ T +Q +I +L + DA I+++TGSGKTLAY +P++ ++ A+ +P + R G FA+V+ PTREL Q ++ L R WIV G ++GGEKKKSEKAR+RKG+NILV+TPGRL DH+ +T+ L + + +LVLDE DR++ELG+E ++Q I+ ++ + + R T+L SATL +++L E+S+K I A +E+ AE +A P +LKQ++ +V AKLRLV+L +F R + K +IF+S D VDFH E+F + + ++P + + T F++P P+ L +LHG++ Q+ R+S F + EA +L+CTDVA+RGLDLP VD +V+Y+P S D++HR+GRTAR+G G +LIFL P E N++ R L +++LK+ F N K E ATD Q +E L E + A +A+ S IR+YA++ R +F KELHLGH+AK+FALRD PS+I G+ +G +E K++ K E + +K++ L Sbjct: 53 DSAPRAPRNPNRIEVPSSRPTKRQRTDGGDSGKQQSHGHPHSNQPRQFISSLFTKNPE-PQKAEEVKEEGHVENAKPTNAPLIDGLDTFTNLGLSPNLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLVQRIMALSKPGAQTDATGQPIVHRDSGLFAIVLAPTRELCKQISVVLENLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIPARRTTILCSATLKMSVQKLGEISLKDAVHIKADPEDEDEKARRSKAEE-SAYRVPAQLKQSYAVVAAKLRLVTLTAFFKRTFMRKGSVMKAIIFVSCADSVDFHFEVFTRKQVKEDGGEPSDTDKSEEKPPSSPHGTIAP------ATAFSNPSN------PVTLFRLHGSLPQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGRDGRALIFLQPGCEENYVEVLKRGYRDGGKALTRADANEILKRGFGGNVESGNK------DWETKATDWQCEVERWALENPEYLEMARRAFQSHIRAYATHIAAERSMFNIKELHLGHLAKAFALRDRPSKINVPGLRQG-----KEETKKDFKAERNSAAGKKRKAGGADL 724
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|134034078|sp|Q0CF43.2|DBP7_ASPTN (RecName: Full=ATP-dependent RNA helicase dbp7) HSP 1 Score: 370.163 bits (949), Expect = 1.165e-116 Identity = 241/652 (36.96%), Postives = 360/652 (55.21%), Query Frame = 0 Query: 23 RPRPEVESTEEQPPG-QKRSRGGEEHHLADGTPQDFISSLFNHNPDIP--------QLEAGQVEPLHEAVFTG-HGFDQAGIHPHLVKNLLDAGMVRM-TQVQALAIPVILAGQ-DALIKSQTGSGKTLAYAVPILHKLQAI-----------------RPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGT--------RQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEEN-----HAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK-CRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMN-------LTHD--ARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPS-EANFI----RELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIG 616 RP + ++ G + R G+ H P+ FISSLF+ NP +P + A +P + + G F G+ P L +LL ++ T +Q +I +L + DA I+++TGSGKTLAY +P++ ++ A+ +P + R G FA+V+ PTREL Q ++ L R WIV G ++GGEKKKSEKAR+RKG+NILV+TPGRL DH+++T+ L + + +LVLDE DR++ELG+E+++Q II ++ + + R T+L SATL +++L E+S+K I A ++E+ + +A T P +LKQ++ IV AKLRLV+L +F+ R + K ++F+S D VDFH E+F L + + + TH+ AR+ T F++P P+ L +LHG++ Q R+S F R +A +L+CTDVA+RGLDLP VD +++Y+P S D++HR+GRTAR+G G +LIFL P E ++ R L D +LK+ F N K EE ATD QM +E L + E + A +AY S IR+YA++ R +F KELHLGH+AK+FALRD PS+I G Sbjct: 70 RPAKRQRTDDDHDAGLRDHDRAGQSQHQHQ-HPRQFISSLFSKNP-LPRNAEEPTDEAPAEDAKPTNAPLIDGLDTFTNLGLSPTLAAHLLTKLELKAPTAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPLVQRIMALSHPTNRTDATSTTDAEGQPVVHRDSGLFAIVLAPTRELCKQISVVLEGLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEQELQGIIKKLDARQRPSRIPGVPTKRTTILCSATLKMNVQKLGEMSLKDAIHIKADPADEDGDAKPKNDDESAFTVPAQLKQSYAIVAAKLRLVTLTAFLKRTFMRKGSVMKAIVFVSCADSVDFHFEVFTRKLQDSDENAEDSDASDTKEKPAAFTHNTIARA---TAFSNPSN------PVTLHRLHGSLPQHVRTSTLASFARNKDASVLVCTDVASRGLDLPNVDLVIEYDPAFSAEDHLHRIGRTARLGRDGRALIFLQPGCEEGYVEILKRGYRDGGKALTRTNADDILKRGFGGNVESENK------DWEEKATDWQMDLERWALEKPESLEMARRAYQSHIRAYATHVASERSMFNIKELHLGHLAKAFALRDRPSKINVPG 704
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|143361335|sp|Q0DLB9.2|RH17_ORYSJ (RecName: Full=DEAD-box ATP-dependent RNA helicase 17; Short=OsRH17) HSP 1 Score: 360.147 bits (923), Expect = 6.900e-115 Identity = 210/577 (36.40%), Postives = 320/577 (55.46%), Query Frame = 0 Query: 81 EAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGT-----------RQTLLLSATLTTGIEQLSEVSMKHPKLI-----DAAVSEENHA-------------------ESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWV 621 E +F F G+HP L +L D G T++QA AIPV ++GQ L+K+ TG+GKTLAY PI+H LQ P++ R DG FALV+VPTREL +Q + Q+L F W+VPG ++GGE + EKAR+RKGI+IL++TPGRL+DH+QHT + ++V DEAD +LELG+ + ++ I+ + + + + RQ LLLSATL + +L+++S+K+P +I +++ +NH +++ P +L Q ++ V RL L + + S K+++F+ST D VDFH L+ + P G + D QK + + +LHGNM+Q +R F F ++ +L+ TDVAARGLD P+V I+QY+ P ++YVHRVGRTARIG KG +L+FL P E +++R+LE L E L +VL +N + K + + LQ +ES + S + + A A+ S++R+Y ++ E + IF K+LHLGH+A+SF L++ PS +G+ H V Sbjct: 17 EGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFH----HTVLSQLEWSP----------------GLQL-DTDKKQKF-ISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLH-KRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSL---LGRSHQV 567
BLAST of atp-dependent rna helicase vs. SwissProt
Match: gi|91206549|sp|Q2UE66.1|DBP7_ASPOR (RecName: Full=ATP-dependent RNA helicase dbp7) HSP 1 Score: 362.844 bits (930), Expect = 7.074e-114 Identity = 239/673 (35.51%), Postives = 361/673 (53.64%), Query Frame = 0 Query: 20 RVKRPRPEVESTEEQPPGQKRSRGGEEHHLADGTPQDFISSLFNHNP-------DIPQLEAGQVEPLHEAVFTG-HGFDQAGIHPHLVKNLLDAGMVRM-TQVQALAIPVILA-GQDALIKSQTGSGKTLAYAVPILHKLQAI------------RPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGT--------RQTLLLSATLTTGIEQLSEVSMK---HPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWK-CRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHV-------PIDLLKLHGNMNQSERSSVFKRF-REAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPS-EANFIRELE----GESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRIT--GIGKGHWVDNEERKKRNLKREEHMIKAQKK 643 +V RP + ++SR + H P+ F+SSLF+ NP + Q +P + + G F G+ P L +LL ++ T +Q ++ +L DA I+++TGSGKTLAY +P++ ++ + P + R G FA+V+ PTREL Q ++ L R WIV G ++GGEKKKSEKAR+RKG+NILV+TPGRL DH+++T+ L + + +LVLDE DR++ELG+E+++Q II ++ + + R T+L SATL +++L E+S+K H K A E + P +LKQ++ IV AKLRLV+L +++ R + K ++F+S D VDFH E+F + + S +E A P T V P+ L KLHG++ Q R++ F RE E +L+CTDVA+RGLDLP VD +++Y+P S D+ HR+GRTAR+G G +LIFL+P E N++ L+ L T + +LK+ F N + K EE ATD QM +E + + + A +AY S IR+YA++ R +F KELHLGH+AKSFALRD PS+I G+ G ++ K++ K E + + ++K Sbjct: 67 QVSSSRPSKRQKTDADGDNEKSRHDNKQH-----PRQFVSSLFSKNPTPRNAEEEPEQEPVEDAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELKAPTGIQKASMSQLLKEDSDAFIQAETGSGKTLAYLLPLVQRIMTVSNPKNMSTNSKGEPIVHRDSGLFAIVLAPTRELCKQISVVLESLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQGIIQKLDARQRPSRIPGIPTKRTTILCSATLKMNVQKLGEISLKDAVHIKADPADEDGETKRKDDDGFRVPAQLKQSYAIVAAKLRLVTLTAYLKRTFMRKGSVMKAIVFVSCADSVDFHFEVFSRRKQYRDESEDEDEEKEDDDEDNSKTKSE-ASPHGTIAPAVAFSNPSNPVKLHKLHGSLPQHVRTATLNAFSREREPSVLVCTDVASRGLDLPNVDLVIEYDPAFSADDHTHRIGRTARLGRDGRALIFLMPGCEENYVEILKQGYRDGGKALTRTTAEDILKRGFGGNITSETK------NWEEKATDWQMDLERWAVDNPQYLEMARRAYQSHIRAYATHIASERSMFNIKELHLGHLAKSFALRDRPSKINVPGLRPG-----DKEAKKDYKAERNTVGKKRK 722
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1339074075|ref|XP_023724325.1| (probable ATP-dependent RNA helicase DDX31 [Cryptotermes secundus] >gi|1330877910|gb|PNF16318.1| hypothetical protein B7P43_G10839 [Cryptotermes secundus]) HSP 1 Score: 613.994 bits (1582), Expect = 0.000e+0 Identity = 309/611 (50.57%), Postives = 413/611 (67.59%), Query Frame = 0 Query: 51 DGTPQDFISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNL-LDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLD 660 D PQ ISSLF +NPDIP V+P+ E VF+ F IHP ++ NL L+ G+ ++T VQ A+PV+L+G+DALI+SQTGSGKTLAYA+PI+ LQ +RPK+ R DG A+VVVPTRELA+Q++EW KL + FTW+VPG L+GGEK+K+EKAR+RKGI +LV TPGRL+DH+QHT+ L ++ +LV+DEADR+L++GYE+DV + I ++ Q +G RQT+LLSATLT+ +++L+ ++++ P IDAA E ++ + P L Q +++ PAKLRLV+L++F++WKC S RKMLIF +TQDMVDFHTEL AR L G+ V ++ KLHGNM Q ER+ VFK FR A++G+LLCTDVAARGLDLP VDWIVQ+ P+S ADYVHRVGRTAR+G+ G++L+FL PSE FIR+LE + L E T+D+ LKKL + + ++LE AAT LQ R E+ +L LH A +AYVS++R YASYP+E+R F FKE+HLGH AKSFALRDPPS I GIG+ W R R+ K + + L+ SE+SSGL+ Sbjct: 60 DCKPQGCISSLFVNNPDIPVFAHHVVKPVSEPVFSSQNFRDLPIHPFMISNLDLNLGLHKLTTVQEKALPVVLSGKDALIRSQTGSGKTLAYALPIVEALQVVRPKISRADGVQAVVVVPTRELALQTYEWFVKLVKPFTWLVPGYLVGGEKRKAEKARLRKGITVLVGTPGRLLDHVQHTKSLQFDKVGWLVVDEADRLLDMGYEKDVASFIKTLDLQRQGDRQTVLLSATLTSSVKKLAGLALQSPVFIDAACDE----SLVSHLVIPQSLTQFYVVTPAKLRLVTLSAFVIWKCEMSDKRKMLIFCATQDMVDFHTELL----------------------ARVLGGSA----------QVNVEFFKLHGNMTQKERTDVFKTFRAADSGVLLCTDVAARGLDLPHVDWIVQFTAPSSAADYVHRVGRTARVGSAGAALLFLTPSEVQFIRQLEDRRIRLQEETMDRCLKKL---------QDAQRDSSLETAATGLQARFETAVLEHRGLHDLACKAYVSWVRFYASYPKEARPAFNFKEVHLGHYAKSFALRDPPSTIGGIGRQQW--QRGRTSRDKKGSSSELGQGYSTLTH--LVTSEFSSGLE 621
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1228012870|ref|XP_021938395.1| (probable ATP-dependent RNA helicase DDX31 [Zootermopsis nevadensis] >gi|646697364|gb|KDR09109.1| putative ATP-dependent RNA helicase [Zootermopsis nevadensis]) HSP 1 Score: 613.994 bits (1582), Expect = 0.000e+0 Identity = 309/638 (48.43%), Postives = 422/638 (66.14%), Query Frame = 0 Query: 26 PEVESTEEQPPGQKRSRGGEEHHLADGTPQDFISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNL-LDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLDGI 662 P + S ++P R + EE+ D PQ +ISSLF +NPDIP V+P+ E VF+ F IHP V NL + G+ ++T VQ A+PVIL+G+DAL++SQTGSGKTLA+A+PI+ LQA+RPK+ R DG A+VVVPTRELA+Q++EW KL + FTWIVPG L+GGEK+K+EKAR+RKGI +L+ TPGRL+DH+QHT+ L ++ +LV+DEADR+ ++GYE+DV ++I A++ Q G+RQT+LLSATL++ +E+L+ +++K P +DAA +E+ A M P+ L Q +++ PAKLRLV+L++FI+WKC S+ RKMLIF +TQDMVDFHTEL L + V + KLHG+M Q ER+ VFK FR A++G+LLCTDVAARGLDLP VDWIVQ+ P++ DYVHRVGRTAR+G G++L+FL PSE FIR+LE + L E T+D LKKL + ++E AT LQ R E+ +L + LH A +AYVS++R YASY +++R F FK++HLGH AKSFALRDPPS I GIG+ W N R R+ KR + ++ L+ SE+SSGL+ + Sbjct: 43 PAIASKRQRP--SVREKTAEEN--IDSKPQGWISSLFVNNPDIPAFAHRVVKPVLEPVFSSQSFKDLSIHPFTVSNLDQNLGLQKLTTVQHKAMPVILSGKDALVRSQTGSGKTLAFALPIVEALQAVRPKISRADGVQAVVVVPTRELALQTYEWFVKLVKPFTWIVPGYLVGGEKRKAEKARLRKGITVLIGTPGRLLDHVQHTKSLQFDKVGWLVVDEADRLFDMGYEKDVASLIEALDSQQRGSRQTVLLSATLSSAVERLAGLTLKSPVFVDAA-GDESLAND---MVIPESLTQFYVLTPAKLRLVTLSAFIIWKCNMSSQRKMLIFCATQDMVDFHTELLALVLG--------------------------------ESDQVDFEFFKLHGSMTQQERTDVFKTFRAADSGVLLCTDVAARGLDLPHVDWIVQFTAPSTVEDYVHRVGRTARVGTAGAALLFLTPSEVPFIRQLEDRRIRLQEQTMDVCLKKL---------RDAHSGPSVEATATGLQARFETAVLEQTRLHDLACKAYVSWVRFYASYRKDARTAFNFKQVHLGHYAKSFALRDPPSAIGGIGRQQWQRNRARTPRDKKRSNSGL--EQGYSTATHLVTSEFSSGLESV 629
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1233180318|ref|XP_022191666.1| (probable ATP-dependent RNA helicase DDX31 [Nilaparvata lugens]) HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0 Identity = 314/687 (45.71%), Postives = 440/687 (64.05%), Query Frame = 0 Query: 1 MSQADEPQ-LTLNLTTEAVERVKRPRPE------VESTEEQPPGQKRSRG-----GEEHHLADGTPQD--FISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNL-LDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEG------TRQTLLLSATLTTGIEQLSEVSMKHPKLIDA-AVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFST-SRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFM-----NNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGL 659 M+Q D+ L LN+TT V + K+ + + VE TE+ P K+ + +E L+ G Q ISSLF +NP+IP + +V+P E VF+ F+ IH ++V+NL + G+ T+VQ ++IP++L G+DALI+SQTGSGKTLAYA+PILH LQ PK+ R DG ALVV+PTRELA+Q++E KL ++F W+VPG+L+GGEKKKSEKAR+RKGINILV TPGRL+DH+++T+C++L + + VLDEADR+L++GYE+DV +++ A+ Q G RQT+LLSAT+T +E+L+ +++ P IDA + ++ MT P LKQ++++ P KLRLV+LA+ I KC+ SRKML+FM+TQDMVD+HTEL L T+ A + KLHG+M Q+ER+++FK FR A++G+L CTDVAARGLDLP V+WIVQY PT+ +DYVHRVGRTAR G GS+LIFL PSE FI LE +++ L+E T++ L L + ++ + G P T E AAT LQ++ E+ + +++LH A +AY S++R YASYPRESR+ F FK LHLGH AKSFALRDPPS I G+ N + + ++ +E +A KK +S SE+ SG+ Sbjct: 1 MTQKDDDDGLMLNITTNPVPKHKKVQNKRKVEKHVEVTEDFQPKAKKKKLLSQDLKKESALSSGEGQSKGRISSLFANNPEIPTVSHKKVKPAVEDVFSKESFESLNIHKYIVQNLKQNFGITETTKVQQMSIPILLEGKDALIRSQTGSGKTLAYALPILHLLQQFEPKITRADGIKALVVIPTRELALQTYECFNKLVKSFAWLVPGLLVGGEKKKSEKARLRKGINILVGTPGRLLDHVENTKCVNLNTVQWFVLDEADRLLDMGYEKDVASLVNALEAQQSGFNRPTFRRQTILLSATMTPKVERLAGLTLNEPSRIDALSGGGGEGGDTSDQMTIPKSLKQSYIVTPPKLRLVTLAAIIHQKCQIEQGSRKMLVFMATQDMVDYHTELLTTVL------------------------TDSA------------EYFKLHGSMTQTERTTIFKTFRAAQSGVLFCTDVAARGLDLPNVEWIVQYTAPTTPSDYVHRVGRTARAGLAGSALIFLAPSELPFIALLEHKNIKLMEETMENCLNNLRLLPLEGADEFQRDRRGGGPTT-EAAATALQLQFENSLYDQKKLHSLACKAYQSWVRFYASYPRESREAFDFKSLHLGHYAKSFALRDPPSTIKGM------TNSKNEDQHNGYKERFNRAAKKPKQVRSKKFSEFDSGI 644
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1022772756|gb|KZS16913.1| (Protein ATP-dependent RNA Helicase [Daphnia magna]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 295/636 (46.38%), Postives = 401/636 (63.05%), Query Frame = 0 Query: 57 FISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNL-LDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQME-----GTRQTLLLSATLTTGIEQLSEVSMKHPKLI----DAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGK-GHWVDNEERKKRNLKREEHMIK-----AQKKRINQKS-----LIVSEYSSGLDGIESTPAPVKK 671 ISSLF NP+IP + VE E +F+ F IH +LV L D + MT+ Q+ IP++L +DA++KSQTGSGKTLAYA+PI+ KLQ+I PK+ R G FALVVVPTREL +Q++ W K+ + FTW+VPG L+GGEKKKSEKAR+RKG+NIL+STPGRL+DH+ T L+L RL +L++DEADR+L++GYE+DV I++ + E G RQT+LLSATL+ G+E+L+ +++ P+ I DA+++++ + TP LKQ ++IVP KLRL +LA+FILWKC ST +K+L+FM+TQD VD+H ELF L R PI KLHGNM Q +R+++FK FR+ E+G+LLCTDVAARGLDL VDWIVQYNPP + +YVHRVGRTAR+G G ++IFL P E +F+ L L +VE D +LK L + R T+E+AAT LQ+ E ++ L++ AT+ YVSF+RSYA+ P++ R++F F+ LHLGH AKSFALRDPP++I G+ G D + +R M+K +Q S ++SE+SSGLD PAP KK Sbjct: 154 IISSLFFKNPEIPTVTKENVESTEENLFSSRSFSALNIHKYLVATLEKDLNLKHMTEAQSRTIPILLDKKDAIVKSQTGSGKTLAYAIPIVEKLQSITPKIDRSSGVFALVVVPTRELVLQTYSWFVKILKPFTWVVPGYLIGGEKKKSEKARIRKGMNILISTPGRLLDHLTSTRNLNLGRLHWLIMDEADRLLDMGYEKDVGRIVSIVEEHFVKEGSLGRRQTVLLSATLSKGVEKLAGLALTDPEHIKLSEDASINQDQ-------LVTPTNLKQWYIIVPPKLRLATLAAFILWKCTISTEKKVLVFMTTQDSVDYHAELFNRVLAKREGR-------------------------------TPISFCKLHGNMPQKDRTAIFKEFRDTESGVLLCTDVAARGLDLSSVDWIVQYNPPVTAEEYVHRVGRTARVGKCGQAIIFLAPPETDFVHHLAKRGLSVVEKNPDVILKTL-------ASSWARTSQTMEQAATSLQLSFEESVIESYNLYEMATKGYVSFVRSYAALPKDVREVFNFQSLHLGHYAKSFALRDPPAQINTAGRMGQRNDRVQPFNTARQRNPSMLKRAAALGSDGTQHQPSHYELQAMLSEFSSGLD-----PAPAKK 739
BLAST of atp-dependent rna helicase vs. nr
Match: gi|321460070|gb|EFX71116.1| (hypothetical protein DAPPUDRAFT_309224 [Daphnia pulex]) HSP 1 Score: 557.755 bits (1436), Expect = 0.000e+0 Identity = 292/641 (45.55%), Postives = 406/641 (63.34%), Query Frame = 0 Query: 57 FISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNL-LDAGMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQME-----GTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGK-GHWVDN----EERKKRN---LKREEHMI-----KAQKKRINQKSLIVSEYSSGLDGIESTPAPVKKTMGKKPT 678 ISSLF NP+IP++ VE E VF+ F IH +L+ L D + +MT+ Q+ IP++L +DAL+KSQTGSGKTLAYA+PI+ ++I PK+ R G FALV+VPTREL +Q++ W K+ +AFTW+VPG L+GGEKKKSEKAR+RKG+NIL+STPGRL+DH+ T L+L RL +LV+DEADR+L++GYE+DV I++ + E G RQ +++SATL+ G+E+L+ +++ P+ I + E+ +E+ + TP LKQ ++IVP KLRL +LA+FILWKC ST +K+LIFM+TQD VD+H ELF L R I KLHG+M Q +R+++FK FR+ ++G+LLCTDVAARGLDL +DWIVQYNPP + +YVHRVGRTAR+G G ++IFL P E +F+ L + +VE D +LK L +S S T T+E+AAT +Q+ E ++ +++ AT+ YVSF+RSYA+ P++ RD+F F+ LHLGH AKSFALRDPP++I G+ G D ++RN LKR + ++ ++SEYSSGLD PAP KK M +PT Sbjct: 156 IISSLFFKNPEIPEVTKDHVEATEENVFSSQSFSALKIHKYLITTLEKDLNLKQMTEAQSRTIPILLDKKDALVKSQTGSGKTLAYAIPIV---ESITPKIDRTSGVFALVIVPTRELVLQTYTWFTKILKAFTWVVPGYLIGGEKKKSEKARIRKGMNILISTPGRLLDHLSSTRNLNLGRLHWLVMDEADRLLDMGYEKDVARILSIVQEHFVKEGCIGRRQNVMVSATLSKGVEKLAGLTLTDPEYIKLS---EDDSENQDQLVTPTNLKQWYIIVPPKLRLATLAAFILWKCTISTEKKVLIFMTTQDSVDYHAELFNRVLAKREDR-------------------------------TSISFYKLHGSMPQKDRTAIFKEFRDTDSGVLLCTDVAARGLDLSAIDWIVQYNPPVTAEEYVHRVGRTARVGKCGQAIIFLAPPETDFVHRLANRGISVVEKNPDAILKTL---TNSWSKTT----QTMEQAATSIQLCFEECVIESYNVYEMATKGYVSFVRSYAALPKDVRDVFNFQSLHLGHYAKSFALRDPPAQINTNGRMGQRNDRIQPFNTARQRNPALLKRAAAQALGSEGTQHQPNFYERQAMLSEYSSGLD-----PAPAKK-MKVRPT 746
BLAST of atp-dependent rna helicase vs. nr
Match: gi|939262543|ref|XP_014251205.1| (probable ATP-dependent RNA helicase DDX31 [Cimex lectularius]) HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0 Identity = 296/613 (48.29%), Postives = 404/613 (65.91%), Query Frame = 0 Query: 59 SSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGI-HPHLVKNLLDAGMV-RMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQME------GTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFM----NNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGL 659 SSLF+HNP+IP V P+ E +F+ + F G+ HPHLV NL + +MT VQ L IP +L GQDAL++SQTGSGKTLAYAVPI+ LQ+I PK+ R DG AL+++PTRELA+Q++E KLCRAFTWIVPG+++GGEKKKSEKAR+RKGIN+LV TPGR++DH QHT+ L L +L +L+LDEAD++L+LGYERD+ ++++ I +Q + G +QT+LLSATL G+E+L+ +++ P IDA+ +N A+ P +L Q +++ PAKLRLV+LASFI+ C K+LIFM+TQDMVD++T+L + + + N+ + KLHGNM Q++R VF +FR++++G+LLCTDV ARGLDLPQVDWIVQ+ P YVHRVGRTAR+G GSSL+FL+PSE F++ L+ + + L E+ ++ LK L + D S +G +E AAT LQ E +L+ + LH A +AY S++R YASYP ESR F FK LHLGH AK FALRD PS I GIGK ++ + R KR +K++ ++AQ R K LI SE+ SG+ Sbjct: 67 SSLFHHNPEIPDATDFDVVPIEEPLFSQNTFKSLGVLHPHLVANLEQLFQITKMTIVQQLTIPPLLQGQDALVRSQTGSGKTLAYAVPIMQMLQSITPKIARNDGVKALIILPTRELALQTYECFLKLCRAFTWIVPGIIVGGEKKKSEKARLRKGINVLVGTPGRILDHAQHTQVLLLHKLDWLILDEADKLLDLGYERDIGSLVSMIKDQRDRSDEDVGKKQTVLLSATLGPGVERLAGLTLNKPLKIDAS---QNDMPENDALVIPHQLSQKYVVTPAKLRLVTLASFIVTICEVEGKSKVLIFMATQDMVDYYTDLIPSVITS-----------NVVY-------------------------FKLHGNMTQTDRVEVFNKFRQSDSGVLLCTDVGARGLDLPQVDWIVQFTAPIEPNKYVHRVGRTARVGTSGSSLLFLIPSELPFLQFLQEKRIKLEEVNMENYLKNLLKIKLESKDGQSYGSG-----VEGAATMLQHNFEHAVLNEKGLHSLACKAYRSWVRFYASYPNESRVAFNFKSLHLGHHAKCFALRDTPSVIGGIGKPNF-KLKNRSKRKVKKDSLGLEAQASRT--KRLITSEFDSGM 632
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1101355783|ref|XP_018904032.1| (PREDICTED: probable ATP-dependent RNA helicase CG8611 [Bemisia tabaci]) HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0 Identity = 280/563 (49.73%), Postives = 384/563 (68.21%), Query Frame = 0 Query: 59 SSLFNHNPDIPQLEAGQVEPLHEAVFTGHGF-DQAGIHPHLVKNLLDAGMV-RMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAESLTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFM--NNDSVSPKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGK 617 SSLF NP++PQ+E ++P +EAVF+ F D A +HPH VKNL D V +MTQVQ L + +L G+D L+ SQTGSGKTLAYA+PI+ LQ RP++VR DG ALVV+PTRELA+Q++E KL + FT +VPG+L+GGEK+KSEKAR+RKG+NILV TPGRL+DH HT CL L + +L+LDEADR+L+LGYERDV +++ ++EQ + +RQT+LLSATLT+ +E+L+ +++K+ + ID + S ++ + PD L Q + I P KLRL +L +FI+WKC T+ KML+FM+TQDMVD+H +LF + +N++ K+ S KLHGNM Q ER +F FR++ +G+L+CTDVAARG+D+P+VDWI+QY P S A YVHRVGRTAR G GS+L+FL+PSE FI L+ + L++ + L+KL + + G +T+E AAT LQ+ E +L +ELH A+ AY+S+IR Y++YP+E R IF FKE+HLGH+AKSFALRDPPS I+ GK Sbjct: 122 SSLFRKNPEVPQVENKSIKPKNEAVFSSKFFKDVAELHPHTVKNLADVLHVTQMTQVQELTLFPLLEGKDLLVCSQTGSGKTLAYALPIVEMLQKKRPEIVRSDGVKALVVLPTRELALQTYECFVKLVKPFTRLVPGLLVGGEKRKSEKARLRKGVNILVGTPGRLLDHAMHTCCLQLSSVEWLILDEADRLLDLGYERDVASLVRTLDEQQKNSRQTILLSATLTSAVEKLAGLALKNAERIDVSDSIDHE------LVIPDFLCQCYTITPPKLRLAALGAFIIWKCSVETAGKMLVFMATQDMVDYHHDLFNSVINSVVKKKILFS--------------------------------KLHGNMTQQERFKIFNDFRQSLSGVLMCTDVAARGIDVPKVDWIIQYTAPVSPAYYVHRVGRTARAGEAGSALLFLVPSEVRFIELLQERQIRLIQENAESYLEKLLALRQDKRHRQEIG---STMESAATYLQLEFEKAVLENKELHNSASNAYISWIRFYSTYPKEVRSIFPFKEIHLGHMAKSFALRDPPSNISRHGK 643
BLAST of atp-dependent rna helicase vs. nr
Match: gi|1351424462|ref|XP_023932266.1| (probable ATP-dependent RNA helicase DDX31 isoform X2 [Lingula anatina]) HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0 Identity = 281/627 (44.82%), Postives = 418/627 (66.67%), Query Frame = 0 Query: 54 PQDFISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAV----SEENHAESLTAMTT-------PDRLKQAFLIVPAKLRLVSLASFILWKCRFST-SRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVS---PKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLDGIES 664 PQ ++SLF +NP+IP++ + VE L E +F+ F + +HP LVK L + G+ MT +Q +IP I++G D L+KSQTGSGKTLA+A+P++ LQ+I PK+ R DG +A+V+VPTRELA+QS QKL + F WIVPG L+GGE+KKSEKAR+RKGINILVSTPGRLIDH+Q+TE L L ++ +L++DEADR+L++G+ERDV I+ ++NE+ EG RQT+LLSATL+ G+E+L+ +S+ +P+L++ + ++ + +S+T T P+ L+Q F++VP+KLRLV+LA+FIL KC+++ + KM++FM+TQD +FH L T+ + F + + + I++ KLHG+M Q ER+ VF+ F +G+LLCTDVAARGLDLP+V WIVQYN P + +Y+HRVGRTAR G +GSSL+FL PSE ++++ L + + E+++ +VL+ L + + ++ GR P+++EE+AT LQ R E+ + +E Q A +AY SF+RSYA+YP + IF K LHLGH+AKSF LR+ P +I+ + +RK ++ KR+N +SEY+SGLD +++ Sbjct: 107 PQQIVASLFRNNPEIPKVSSHAVEQLKEKIFSSDKFSELQLHPFLVKYLEEKMGLSHMTSIQQKSIPQIISGHDTLVKSQTGSGKTLAFAIPVVQHLQSIVPKIQRQDGPYAIVIVPTRELALQSLAIFQKLVQPFHWIVPGCLMGGERKKSEKARLRKGINILVSTPGRLIDHVQNTEALGLTKVKWLIIDEADRLLDMGFERDVAQIVNSLNEKQEGHRQTVLLSATLSQGVERLAGMSLVNPQLVEVSKPVTDTKVSKPDSVTVTQTTDDKFVIPEHLQQHFIVVPSKLRLVTLAAFILQKCKYAAENNKMVVFMATQDSTEFHHSLLVNTIAS------------------------FKEEEEEEGDERDIEIFKLHGDMVQKERTQVFQDFSSTRSGVLLCTDVAARGLDLPKVKWIVQYNTPGTPTEYIHRVGRTARAGTRGSSLLFLSPSEVDYVQVLNDHKISMEEVSMKEVLQTLMVLSQELAEGRKSKGRHPHSVEESATVLQNRFETYLYQNKERIQLAKKAYQSFLRSYATYPSNLKHIFHMKNLHLGHVAKSFGLREAPKQISQFKDNKYAVKLQRKTERREQLHKEASLPHKRVN-----MSEYASGLDVVKT 704
BLAST of atp-dependent rna helicase vs. nr
Match: gi|919067197|ref|XP_013415138.1| (probable ATP-dependent RNA helicase DDX31 isoform X1 [Lingula anatina]) HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0 Identity = 280/627 (44.66%), Postives = 417/627 (66.51%), Query Frame = 0 Query: 54 PQDFISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAV----SEENHAESLTAMTT-------PDRLKQAFLIVPAKLRLVSLASFILWKCRFST-SRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVS---PKTGRPPNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREEHMIKAQKKRINQKSLIVSEYSSGLDGIES 664 PQ ++SLF +NP+IP++ + VE L E +F+ F + +HP LV L + G+ MT +Q +IP I++G D L+KSQTGSGKTLA+A+P++ LQ+I PK+ R DG +A+V+VPTRELA+QS QKL + F WIVPG L+GGE+KKSEKAR+RKGINILVSTPGRLIDH+Q+TE L L ++ +L++DEADR+L++G+ERDV I+ ++NE+ EG RQT+LLSATL+ G+E+L+ +S+ +P+L++ + ++ + +S+T T P+ L+Q F++VP+KLRLV+LA+FIL KC+++ + KM++FM+TQD +FH L T+ + F + + + I++ KLHG+M Q ER+ VF+ F +G+LLCTDVAARGLDLP+V WIVQYN P + +Y+HRVGRTAR G +GSSL+FL PSE ++++ L + + E+++ +VL+ L + + ++ GR P+++EE+AT LQ R E+ + +E Q A +AY SF+RSYA+YP + IF K LHLGH+AKSF LR+ P +I+ + +RK ++ KR+N +SEY+SGLD +++ Sbjct: 107 PQQIVASLFRNNPEIPKVSSHAVEQLKEKIFSSDKFSELQLHPFLVTYLEEKMGLCHMTSIQQKSIPQIISGHDTLVKSQTGSGKTLAFAIPVVQHLQSIVPKIQRQDGPYAIVIVPTRELALQSLAIFQKLVQPFHWIVPGCLMGGERKKSEKARLRKGINILVSTPGRLIDHVQNTEALGLTKVKWLIIDEADRLLDMGFERDVAQIVNSLNEKQEGHRQTVLLSATLSQGVERLAGMSLVNPQLVEVSKPVTDTKVSKPDSVTVTQTTDDKFVIPEHLQQHFIVVPSKLRLVTLAAFILQKCKYAAENNKMVVFMATQDSTEFHHSLLVNTIAS------------------------FKEEEEEEGDERDIEIFKLHGDMVQKERTQVFQDFSSTRSGVLLCTDVAARGLDLPKVKWIVQYNTPGTPTEYIHRVGRTARAGTRGSSLLFLSPSEVDYVQVLNDHKISMEEVSMKEVLQTLMVLSQELAEGRKSKGRHPHSVEESATVLQNRFETYLYQNKERIQLAKKAYQSFLRSYATYPSNLKHIFHMKNLHLGHVAKSFGLREAPKQISQFKDNKYAVKLQRKTERREQLHKEASLPHKRVN-----MSEYASGLDVVKT 704
BLAST of atp-dependent rna helicase vs. nr
Match: gi|593709876|ref|XP_007101529.1| (probable ATP-dependent RNA helicase DDX31 isoform X1 [Physeter catodon]) HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0 Identity = 291/648 (44.91%), Postives = 409/648 (63.12%), Query Frame = 0 Query: 39 KRSRGGEEHHLADGTPQDFISSLFNHNPDIPQLEAGQVEPLHEAVFTGHGFDQAGIHPHLVKNLLDA-GMVRMTQVQALAIPVILAGQDALIKSQTGSGKTLAYAVPILHKLQAIRPKLVRGDGAFALVVVPTRELAIQSFEWIQKLCRAFTWIVPGMLLGGEKKKSEKARVRKGINILVSTPGRLIDHIQHTECLSLKRLMFLVLDEADRMLELGYERDVQAIITAINEQMEGTRQTLLLSATLTTGIEQLSEVSMKHPKLIDAAVSEENHAES------------------LTAMTTPDRLKQAFLIVPAKLRLVSLASFILWKCRFSTSRKMLIFMSTQDMVDFHTELFQATLNAMPKRPKTLSRMNLTHDARSLLGTEFADPQTTQKHHVPIDLLKLHGNMNQSERSSVFKRFREAEAGLLLCTDVAARGLDLPQVDWIVQYNPPTSKADYVHRVGRTARIGAKGSSLIFLLPSEANFIRELEGESLLLVEMTLDQVLKKLFMNNDSVSPKTG--RP----PNTLEEAATDLQMRMESLILSREELHQQATQAYVSFIRSYASYPRESRDIFCFKELHLGHIAKSFALRDPPSRITGIGKGHWVDNEERKKRNLKREE-HMIKAQKKRINQKSLIVSEYSSGLD 660 KRS G + P SSLF +NP+IP+L V+ + E VFT F +HPHL+ + M MT VQ +IPV+L G+DAL++SQTGSGKTLAY +P++ LQA++PK+ RGDG +AL++VPTRELA+QSF+ +QKL + FTWIVPG+L+GGEK+KSEKAR+RKGINIL+STPGRL+DHI+ T+ + +R+ +L+LDEADR+L+LG+ +DV I+ AIN + + RQ +LLSATLT G+ L+++S+ P + +V +E+H +S L + P L+Q +VP+KLRLVSLA FIL KC+F +KM+IF S+ ++VDFH LF TL L G+ P + + L+LHG++ Q ER++VF+ F ++ G+LLCTDVAARGLDLPQV WIVQYN P+S A+Y+HR+GRTARIG +GSSL+ L PSEA ++ L + + E+ ++ +L L ++ + G +P P + E AT LQ E + S E A +A SFIR+YA+YPRE + IF + LHLGH+AKSF LRD P +T + ++KK NLKR + H K+R+ + ++ SEYSSG++ Sbjct: 84 KRSSAGASDGNQERKPGIKTSSLFKNNPEIPELHRPVVKQVQEKVFTSDAFQALDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKPKIQRGDGPYALILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFRRIQWLILDEADRILDLGFGKDVAVILNAINAERQ-ERQNVLLSATLTEGVTWLADISLHDP--VSISVLDESHDQSNPESKAIPEASPPQASDELDSFAIPASLEQYVTVVPSKLRLVSLAGFILQKCKFERDQKMIIFFSSCELVDFHYNLFLQTL---------------------LSGSGALAPGGLPRASTRLTFLRLHGDLEQEERTAVFQEFSRSKTGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILSVLTWDDCFKGRRWGSQKPRSVGPQEIRERATVLQTVFEDYVHSSERTVSGAKKALQSFIRAYATYPRELKHIFHIRSLHLGHVAKSFGLRDAPKNLTALA-------TKKKKANLKRPDLHSRTQSKQRLAE--ILRSEYSSGME 698 The following BLAST results are available for this feature:
BLAST of atp-dependent rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of atp-dependent rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of atp-dependent rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold14_size734282:245450..248523+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold14_size734282-snap-gene-2.22 ID=maker-scaffold14_size734282-snap-gene-2.22|Name=atp-dependent rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=3074bp|location=Sequence derived from alignment at scaffold14_size734282:245450..248523+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-dependent rna helicase' has the following synonyms
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