arginine serine-rich splicing factor 4 isoform 1, maker-scaffold157_size297442-snap-gene-1.28 (gene) Tigriopus kingsejongensis

Overview


Name	arginine serine-rich splicing factor 4 isoform 1
Unique Name	maker-scaffold157_size297442-snap-gene-1.28
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005475 (supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 gene:EMLSAG00000005475 transcript:EMLSAT00000005475 description:"maker-LSalAtl2s294-augustus-gene-0.9")

HSP 1 Score: 245.743 bits (626), Expect = 4.826e-78
Identity = 126/188 (67.02%), Postives = 151/188 (80.32%), Query Frame = 0

Query:    1 MPSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRR---DRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRV 185
            MPSREG RVF+GNL Y  RERD+E+FF+++ RV NIFIK GKYGF EFDDYRDADDAVY+LNG EL  ER+T+EHARG RR        SG    G  G    GR     KYGPPTRTNYR+IVENLS+RVSWQDLKD+MR+AG+VT+A+AHND+RNEGVVEF  RRDM+RA+DKF++++LHGRR+R+
Sbjct:   34 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGYRGDRYRGRGGGRGKYGPPTRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGRRIRL 221

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007146 (supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1 gene:EMLSAG00000007146 transcript:EMLSAT00000007146 description:"maker-LSalAtl2s402-augustus-gene-7.14")

HSP 1 Score: 199.134 bits (505), Expect = 8.737e-60
Identity = 105/202 (51.98%), Postives = 137/202 (67.82%), Query Frame = 0

Query:    2 PSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRA---------------NWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKD 188
            P +   RV++G L +  RERDVEK  +K+ +VR + +K G YGFVEFDDYRDADDA Y+LNG+E MGERVT+E ARG      P  GRD    G G  G R                 W++KYGPPTRT++R++VENLSSRVSWQDLKD MR+AG+VTYA+AH +RRNEG VEF    D+  A++K +  +L+GR++++  D
Sbjct:   10 PDKMSTRVYMGGLSHRVRERDVEKLIRKYGKVREVSLKNG-YGFVEFDDYRDADDACYDLNGKEFMGERVTVELARGT-----PH-GRDRERWGTGSTGRRERSPKRRRDSKSSSRPGWLDKYGPPTRTDFRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRNEGCVEFANEDDLKTAMEKLDGTELNGRKIKLVPD 204

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000002605 (supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 gene:EMLSAG00000002605 transcript:EMLSAT00000002605 description:"maker-LSalAtl2s151-augustus-gene-0.11")

HSP 1 Score: 167.162 bits (422), Expect = 1.729e-49
Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 0

Query:    1 MPSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTR-TNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKD 188
            MP    +R+++GN+  D RERDVEKFF+ + ++R + +K G YGFVEF+D+RDADDAV +L+G+++ G RV +E AR PR  R  R     +        GR     K  PP R T YRI VENLS R SWQDLKD  R  G++TY NAH  R NEGVVEFG +R M+ ALD+ +D DL GRR++++++
Sbjct:    1 MPGNH-HRLYLGNISDDTRERDVEKFFKGYGKLREVALKNG-YGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARSPREKRNSRYQSRRSP-----PRGRRGPPMKRNPPGRRTQYRIRVENLSXRTSWQDLKDYFRSCGEITYTNAHKPRNNEGVVEFGDKRAMENALDRLDDTDLGGRRIKLYEE 182

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000009359 (supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-1 gene:EMLSAG00000009359 transcript:EMLSAT00000009359 description:"maker-LSalAtl2s599-augustus-gene-2.23")

HSP 1 Score: 145.591 bits (366), Expect = 7.799e-38
Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRV 185
            G RV VG L  D    D+   F K+    ++ +K  ++ F+EFD +RDAD AV  L+G    G R+++E ARGPR      + +    GG       A WV++YG P  T Y+I+V+NLS+R+ WQDLKDLM+KAG VTYA AH +  +EG+V F     M +A+D F DYDL GR+L V
Sbjct:   37 GCRVXVGXLPXDTSRSDIRDIFSKYRDRFDMKLKT-RFAFIEFDYHRDADHAVDNLDGLTFRGRRISVEVARGPRT-----ADKYRFKGGLNHEPVXATWVKRYGTPEITKYKILVKNLSTRIEWQDLKDLMKKAGTVTYALAHKNNMHEGMVCFSNEEGMLKAIDIFNDYDLCGRKLIV 210

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000008203 (supercontig:LSalAtl2s:LSalAtl2s495:117181:128694:1 gene:EMLSAG00000008203 transcript:EMLSAT00000008203 description:"augustus_masked-LSalAtl2s495-processed-gene-1.3")

HSP 1 Score: 90.5077 bits (223), Expect = 4.397e-21
Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIK----PGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGR--GGRANWVEKYGPPTR-TNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFED 175
            R++VGNL  D R +D+E  F K+ ++  I +K    P  + FVEF+D+RDADDAVY  +G +  G ++ +E  RG       RSG    G  GG    GGR       GPPTR + +R++V  L    SWQDLKD MR+AGDV +A+ + D    G  E+    DM  A+ K  D
Sbjct:    6 RIYVGNLPPDIRTKDIEDLFYKYGKIVFIDLKNRRGP-PFAFVEFEDHRDADDAVYARDGYDYDGYKLRVEFPRGGGGSFRGRSGGRGDGAXGGSSRDGGRNR-----GPPTRRSQFRVVVSGLPPSGSWQDLKDHMREAGDVCFADVYKD--GTGACEYLRYEDMKYAIKKLND 172

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000003940 (supercontig:LSalAtl2s:LSalAtl2s211:7865:12537:1 gene:EMLSAG00000003940 transcript:EMLSAT00000003940 description:"maker-LSalAtl2s211-augustus-gene-0.12")

HSP 1 Score: 54.6842 bits (130), Expect = 2.640e-8
Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 0

Query:  111 PPTRTNYRIIVENLSSRVSWQDLKDLMRK-AGDVTYANAHNDR----RNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRS-------RSKSDSRSRSRSRSRSRGRDAR 218
            PP R   R+ + N    + WQ++KD+ RK  GDVTY    ND     R  G++EF       + ++K   ++  GR+L V +D +  R +         ++  SR RS  R RSRG D R
Sbjct:   40 PPER---RVFISNFPFEMKWQEIKDMFRKEVGDVTYVELFNDEQDRPRGXGIMEFATPDLAKKCIEKMHRFEYKGRKLVVKEDFDTLRDKCGRIVGSRAARDRSRDRSHERDRSRGGDIR 156

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005276 (supercontig:LSalAtl2s:LSalAtl2s2821:6099:8923:1 gene:EMLSAG00000005276 transcript:EMLSAT00000005276 description:"maker-LSalAtl2s2821-augustus-gene-0.8")

HSP 1 Score: 51.9878 bits (123), Expect = 2.839e-8
Identity = 27/69 (39.13%), Postives = 47/69 (68.12%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFI--KPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIE 74
            +V+VGNL  +A + ++E  F+++ +VR++++   P  + FVEF+D RDA+DA   L+G  + G R T+E
Sbjct:   13 KVYVGNLGDNASKHELEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDASKALDGSRICGVRATVE 81

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007190 (supercontig:LSalAtl2s:LSalAtl2s404:347783:355385:1 gene:EMLSAG00000007190 transcript:EMLSAT00000007190 description:"maker-LSalAtl2s404-augustus-gene-3.38")

HSP 1 Score: 53.9138 bits (128), Expect = 4.577e-8
Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFI--KPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRD 82
            +V++GNL   A + ++E  F K+  ++N+++   P  + FVEF+D RDA+D+V  L+G  + G+RV +E + G  R+
Sbjct:   12 KVYIGNLGNSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGXRVCGQRVRVEMSSGQSRN 88

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Match: EMLSAG00000001436 (supercontig:LSalAtl2s:LSalAtl2s1245:53540:55574:-1 gene:EMLSAG00000001436 transcript:EMLSAT00000001436 description:"maker-LSalAtl2s1245-augustus-gene-0.16")

HSP 1 Score: 53.9138 bits (128), Expect = 4.990e-8
Identity = 27/83 (32.53%), Postives = 48/83 (57.83%), Query Frame = 0

Query:    3 SREGYRVFVGNLHYDARERDVEKFFQKFARVRNI---------FIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHA 76
            S EG+ +FV  +H +A+E D+   F  F  ++N+         F+K   Y  VEF+ Y++A  A   L+G +L+G+++T++ A
Sbjct:   69 SVEGWILFVTGIHEEAQEDDIHDSFSDFGEIKNVHLNLDRRTGFLK--GYALVEFETYKEALSAKESLDGSDLLGQKITVDWA 149

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE (RecName: Full=Serine/arginine-rich splicing factor 4; AltName: Full=Splicing factor, arginine/serine-rich 4)

HSP 1 Score: 233.417 bits (594), Expect = 2.056e-70
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDR 189
            RV++G L Y ARERDVE+FF+ + ++  + +K G YGFVEFDD RDADDAVYELNG++L GERV +EHARGPRRD        S G G  G G R +  +KYGPPTRT YR+IVENLSSR SWQDLKD MR+AG+VTYA+AH  R+NEGV+EF    DM RAL+K +  +++GR++R+ +D+
Sbjct:    3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNG-YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRD-------GSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK 176

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|20981726|sp|Q08170.2|SRSF4_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 4; AltName: Full=Pre-mRNA-splicing factor SRP75; AltName: Full=SRP001LB; AltName: Full=Splicing factor, arginine/serine-rich 4)

HSP 1 Score: 230.335 bits (586), Expect = 3.618e-69
Identity = 108/182 (59.34%), Postives = 138/182 (75.82%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDR 189
            RV++G L Y ARERDVE+FF+ + ++  + +K G YGFVEFDD RDADDAVYELNG++L GERV +EHARGPRRD        S G G  G G R +  +KYGPPTRT YR+IVENLSSR SWQDLKD MR+AG+VTYA+AH  R+NEGV+EF    DM RAL+K +  +++GR++R+ +D+
Sbjct:    3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNG-YGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRD-------GSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK 176

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|78099805|sp|P26686.4|SRR55_DROME (RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName: Full=52 kDa bracketing protein; AltName: Full=B52 protein; AltName: Full=Protein enhancer of deformed)

HSP 1 Score: 208.764 bits (530), Expect = 3.108e-62
Identity = 114/190 (60.00%), Postives = 136/190 (71.58%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEK-------YGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKD 188
            G RV+VG L Y  RERD+E+FF+ + R R+I IK G YGFVEF+DYRDADDAVYELNG+EL+GERV +E ARG  R        D  GG  GG GGR N   K       YGPP RT YR+IVENLSSRVSWQDLKD MR+AG+VTYA+AH  RRNEGVVEF    DM  A++K +D +L+GRR+ + +D
Sbjct:    3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNG-YGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 191

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|20981728|sp|Q13247.2|SRSF6_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Pre-mRNA-splicing factor SRP55; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 206.838 bits (525), Expect = 8.344e-62
Identity = 104/198 (52.53%), Postives = 132/198 (66.67%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPR----------------SGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDR 189
            RV++G L Y+ RE+D+++FF  + R+  + +K G YGFVEF+D RDADDAVYELNG+EL GERV +EHARGPRRDR                   SGRD                 KYGPP RT YR+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RALDK +  +++GR +R+ +D+
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNG-YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRD-----------------KYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDK 182

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 205.682 bits (522), Expect = 2.076e-61
Identity = 104/198 (52.53%), Postives = 132/198 (66.67%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPR----------------SGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDR 189
            RV++G L Y+ RE+D+++FF  + R+  I +K G YGFVEF+D RDADDAVYELNG+EL GERV +EHARGPRRDR                   SGRD                 KYGPP RT +R+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RALDK +  +++GR +R+ +D+
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNG-YGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRD-----------------KYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDK 182

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|1168968|sp|Q09167.1|SRSF5_RAT (RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Insulin-induced growth response protein CL-4; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5 >gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5)

HSP 1 Score: 166.392 bits (420), Expect = 2.662e-47
Identity = 95/195 (48.72%), Postives = 127/195 (65.13%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRD-------------RGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFK 187
            G RVF+G L+  ARE+DVE+FF+ + R+R+I +K G +GFVEF+D RDADDAVYEL+G+EL  ERVTIEHAR   R              R PR+ R +A                  PP RT  R+IVENLSSRVSWQDLKD MR+AG+VT+A+AH  + NEGVVEF    D+  A++K    +++GR++++ +
Sbjct:    3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG-FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNA------------------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 178

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|3929378|sp|Q13243.1|SRSF5_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5)

HSP 1 Score: 166.392 bits (420), Expect = 2.893e-47
Identity = 95/195 (48.72%), Postives = 127/195 (65.13%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRD-------------RGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFK 187
            G RVF+G L+  ARE+DVE+FF+ + R+R+I +K G +GFVEF+D RDADDAVYEL+G+EL  ERVTIEHAR   R              R PR+ R +A                  PP RT  R+IVENLSSRVSWQDLKD MR+AG+VT+A+AH  + NEGVVEF    D+  A++K    +++GR++++ +
Sbjct:    3 GCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG-FGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNA------------------PPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 178

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|56749459|sp|Q23120.1|RSP2_CAEEL (RecName: Full=Probable splicing factor, arginine/serine-rich 2; AltName: Full=CeSRp40; AltName: Full=RNA-binding protein srp-4)

HSP 1 Score: 135.576 bits (340), Expect = 1.720e-35
Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGR------GGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAG-DVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSR 207
            RV++G L   A +RDVE FF+ + ++ ++ +K G +GFV+F D RDADDAV++LNG+EL GERV +E    PRR  G    R  +G G  GR      GG   +  +Y  P  T +R++++NLS+R SWQD+KD +RK G + TY+ AH    N+ +V F    D+  A++K +  DL+GR+L+   +          +  SRSRS 
Sbjct:    3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNG-FGFVDFQDQRDADDAVHDLNGKELCGERVILEF---PRRKVGYNEER--SGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRSRSRSPRRRSRSRSP 203

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|56749460|sp|Q23121.1|RSP1_CAEEL (RecName: Full=Probable splicing factor, arginine/serine-rich 1; AltName: Full=CeSRp75; AltName: Full=RNA-binding protein srp-5)

HSP 1 Score: 135.576 bits (340), Expect = 3.497e-35
Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHA----------------------------------RGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAG-DVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNA 191
            R+++G L     E+D+E FF+ + ++R++ +K G +GFVEFDD RDA+DAV++LNG+EL GERV ++++                                  R  R DRGP   R+S                +YG P  T +R++VENLSSR+SWQDLKD +R+ G + TYA AH  R NE ++ F    D+ R ++K +  DL+GR++++  D  A
Sbjct:    4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNG-FGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPR-RES----------------RYGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHK-RPNEALLCFATPSDLKRCIEKCDGMDLNGRKIKMIDDSQA 203

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Match: gi|3929368|sp|O22315.1|SR34_ARATH (RecName: Full=Serine/arginine-rich-splicing factor SR34; Short=At-SR34; Short=At-SRp34; Short=AtSR34; AltName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1 protein)

HSP 1 Score: 118.242 bits (295), Expect = 6.184e-29
Identity = 80/183 (43.72%), Postives = 103/183 (56.28%), Query Frame = 0

Query:    1 MPSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIK----PGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRR-NEGVVEFGCRRDMDRALDKFEDYDL 178
            M SR    V+VGNL  D RER+VE  F K+  V  I +K    P  Y FVEFDD RDA+DA++  +G +  G R+ +E A G RR      G  + GG GGGRG         GP  R+ +R++V  L S  SWQDLKD MRK GDV ++  + D R   GVV++ C  DM  AL K +D + 
Sbjct:    1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDG--GSRGPSRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 181

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1069306015|ref|XP_018096689.1| (PREDICTED: splicing factor, arginine/serine-rich 6 isoform X2 [Xenopus laevis])

HSP 1 Score: 294.278 bits (752), Expect = 5.292e-90
Identity = 200/420 (47.62%), Postives = 269/420 (64.05%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDR-----GPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRS---------------------------RSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRR---SKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSP--QAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR-RSKSKSPRDKSRSRSKSPQEQRRSRSPSPTLRERSNSRSPKE 389
            RV+VG L Y  RE+D+++FF  + ++  + +K G YGFVEF+D RDADDAVYELNG++L GERV +EHARGPRRDR     G RS   S GG    R GR    +KYGPP RT +R++VENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    D+ RA++K +  +++GRR+R+ + +   R                                      + RSRSRS+G      RSRSRS+   +RS S+S+G +R    SK+ G+RSRS SK+  D+SRSRSK+  D+SRSRSK+  D+SRSRS++   ++++ SK   D++RSRSK+  D+SRS SK+  D +RSRS    ++SRSRSK+  DR RS+SK+  D+SRSRSK+  E+  SRS       R  SRSP E
Sbjct:    3 RVYVGRLGYHVREKDIQRFFGSYGKLLEVDLKNG-YGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDRDGYGYGSRSKHGSPGGYRNQRSGR----DKYGPPVRTEFRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERPNEGVIEFRSYSDLKRAVEKLDGTEINGRRIRLVEGKTRHRRSYSGSRSRSRSRSRSKEQSSKPKSPHSSRSRSTSRGKQERSRSRSKG---LVERSRSRSKENDERSHSRSKGIERSRSWSKAKGERSRSLSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKTKDDRSRSRSKIKDDRSRSRSKTKDDRSRSRSKTKDDRSRSRSKTKDDRSRSRSKTKDDRSRSRSKTKDDRSRSRSKAKDERSHSRSKE----NRKRSRSPSE 410

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1338835901|ref|XP_023660799.1| (LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 6-like [Paramormyrops kingsleyae])

HSP 1 Score: 278.87 bits (712), Expect = 2.070e-85
Identity = 213/455 (46.81%), Postives = 270/455 (59.34%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRG--GRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKS-----------------------------------------DSRSRSRSR---SRSRGRDARS-SRSR---SRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSR-----SRSKSPKDKSRSRSKSPKDKSRS----RSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETR---SRSDPPREKSRSRSKSPRDRRSKSKS---PRDKSRSRSKSPQ---EQRRSRSPSPTLRERSNSRSPKEESKSP 394
            RV++G L Y  RE+D+++FF  + ++  I +K G YGFVEFDD RDADDAVYELNG++L GERV +EHARGPRRDR      D  G  G  R   GR    +KYGPP RT YR+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RA+DK +  D++GR++R+ +D+   R                                                D +SRSRSR   SRSR R A+S SRSR   SRSR+   +SRS+SRG K RS+S G +SRSRS+  K +SR     SRS+S   KSRSRS+  K +SRS    RSRS  AK+ S+S   K+RSRS+  + +SRS     R  +R   SRS    +KSRSRS    DR+S+SKS   P+ +  SRS S +   E+ RSRSPSP   E   +   K  S+SP
Sbjct:    3 RVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNG-YGFVEFDDTRDADDAVYELNGKDLCGERVIVEHARGPRRDR------DGYGNSGYSRSRSGR----DKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRAIDKLDGTDINGRKIRLVEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSRSRSRSHARKSRSGSRDKKSRSRSRGGKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSVGQXRSRSRGAKSRSRSRGAKSRSRSRGAKSRSRSQDGKSRSHSRAQKSRSRSRGQKSRSRSA---DRKSRSKSRSNPKSECDSRSHSKEKSVEKSRSRSPSPM--ENGKAECAKSASRSP 441

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1101402290|ref|XP_018912284.1| (PREDICTED: serine-arginine protein 55-like isoform X3 [Bemisia tabaci])

HSP 1 Score: 263.462 bits (672), Expect = 5.870e-82
Identity = 160/296 (54.05%), Postives = 197/296 (66.55%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSP-KDKSRSRSRSPQAKASSKSP 300
            G RV+VG L Y  RERD+E+FF+ F R+R++ +K G YGFVEFDDYRDADDAVYELNG+ELMGER+ +EHARG  R RG    RD  G GG  R  R  W++KYGPPTRT +RIIVENLSSRVSWQDLKD MR+AG+VTYA+AH  RRNEGVVEF    DM  A+DK +D +LHGRR+R+ +DR     RSRS S                +RS R    + +            + R+KSP     SRSKS    S+S+S+SP  K RSRS S  K +SR RS SP+A+++S+SP
Sbjct:    3 GSRVYVGGLPYGVRERDLERFFKGFGRIRDVLLKNG-YGFVEFDDYRDADDAVYELNGKELMGERIVVEHARGTDRTRG----RDRFGSGGPPR--RRQWLDKYGPPTRTEHRIIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFSTYSDMKTAIDKLDDTELHGRRIRLVEDRGRGSRRSRSSSSRSRSRSRSRSR----SRSRRRSPSASSRSRSRSRSRSNSRARTKSP-----SRSKSRDRDSKSKSRSPISKKRSRSHSVSKKQSRERSVSPKARSTSRSP 282

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1043408518|gb|OCA21153.1| (hypothetical protein XENTR_v90025385mg [Xenopus tropicalis])

HSP 1 Score: 269.626 bits (688), Expect = 6.107e-81
Identity = 186/434 (42.86%), Postives = 260/434 (59.91%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWV---EKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSR-----------------GRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKS---------------PGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRS--PQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDRRSKSKSPRDKSRSRSKSPQEQRRSRSPSPTLRERSNSRSPKEESKSPERSERKRSAS 404
            RV++G L Y  RE+D+++FF  + ++  + +K G YGFVEF+D RDADDAVYELNG++L GERV +EHARGPRRDR         G G G R G  N     +KYGPP RT +R+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RA++K +  +++GRR+R+ + +   R               R                      +  RS   +SRS +P   S S+S G+ +                    G RSRS S+  +++SRSRSK   ++SRSRSK  +++SRSRS+    ++++ SK+  +++RSRSK+  D+SRS SK+  D +RSRS    ++SRSRSK+ +D RS+S+S     RSRS+S   + RS SPS +  +RS S+   E S S  +S+R RS S
Sbjct:    3 RVYIGRLGYHVREKDIQRFFGGYGKLLEVDLKNG-YGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDR--------DGYGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAMEKLDGTEINGRRIRLVEGKARHRRSYSGSRSRSRSRSRRRSRSRSRQPSHSRSRSRSHSPAKKGRSPAKKSRSHSPTKSSHSQSPGKSQSRSRSRSRSKERASKPKSEHGSRSRSTSRGKQERSRSRSKGLVERSRSRSKENEERSRSRSKGMDERSRSRSKTQDERSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKA-KDERSRSRSKAKDERSRSRSKDNRERSLSPSKSKHDRSRSQGKHERSGSRSKSKRDRSGS 426

HSP 2 Score: 82.8037 bits (203), Expect = 2.513e-13
Identity = 89/174 (51.15%), Postives = 114/174 (65.52%), Query Frame = 0

Query:  206 SRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPG--DRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDRR----------SKSKSPRDKSRSRSKSPQE 367
            SRSRS SRG+  RS RSRS+    + RSRSK   E+ RS+S G  +RSRSRSK+  ++SRSRSK+  D+SRSRSK+  D+SRSR         SK+  D++RSRSK+  ++SRS SK+  + +RSRS   RE+S S SKS  DR           S+SKS RD+S SRSKS QE
Sbjct:  270 SRSRSTSRGKQERS-RSRSKGLVERSRSRSKENEERSRSRSKGMDERSRSRSKTQDERSRSRSKAKDDRSRSRSKAKDDRSRSR---------SKAKDDRSRSRSKAKDERSRSRSKAKDERSRSRSKDNRERSLSPSKSKHDRSRSQGKHERSGSRSKSKRDRSGSRSKSKQE 433

HSP 3 Score: 75.0998 bits (183), Expect = 7.872e-11
Identity = 90/181 (49.72%), Postives = 113/181 (62.43%), Query Frame = 0

Query:  186 FKDRNASRSRSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR---RSKSKSPRDKSRSRSK 363
              +R+ SRS+        +  RSRSRS+G D    RSRSRS+T  +RSRS       RSK+  DRSRSRSK+  D+SRSRSK+  D+SRSRSK+  ++SRSR         SK+  +++RSRSK  R++S S SKS  D  RSRS    E+S SRSKS RDR   RSKSK  R  S S+SK
Sbjct:  290 LVERSRSRSKE-------NEERSRSRSKGMDE---RSRSRSKTQDERSRS-------RSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDERSRSR---------SKAKDERSRSRSKDNRERSLSPSKSKHD--RSRSQGKHERSGSRSKSKRDRSGSRSKSKQERSSSWSKSK 442

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|47575808|ref|NP_001001248.1| (arginine/serine-rich splicing factor 4 isoform 1 [Xenopus tropicalis] >gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus tropicalis] >gi|1270534803|gb|ATO94809.1| splicing factor, arginine/serine-rich 6, partial [synthetic construct])

HSP 1 Score: 268.855 bits (686), Expect = 1.190e-80
Identity = 190/444 (42.79%), Postives = 263/444 (59.23%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWV---EKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSR-----------------GRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKS---------------PGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRS--PQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR-RSKSKSPRDKSRSRSKSPQE---------QRRSRSPSPTLRERSNSRSPKEESKSPERSERKRSAS 404
            RV++G L Y  RE+D+++FF  + ++  + +K G YGFVEF+D RDADDAVYELNG++L GERV +EHARGPRRDR         G G G R G  N     +KYGPP RT +R+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RA++K +  +++GRR+R+ + +   R               R                      +  RS   +SRS +P   S S+S G+ +                    G RSRS S+  +++SRSRSK   ++SRSRSK  +++SRSRS+    ++++ SK+  D++RSRSK+  D+SRS SK+  D +RSRS    ++SRSRSK+  DR RS+SK   ++SRSRSK+  E         + RS SPS +  +RS S+   E S S  +S+R RS S
Sbjct:    3 RVYIGRLGYHVREKDIQRFFGGYGKLLEVDLKNG-YGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDR--------DGYGYGSRSGYRNQRSGRDKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAMEKLDGTEINGRRIRLVEGKARHRRSYSGSRSRSRSRSRRRSRSRSRQPSHSRSRSRSHSPAKKGRSPAKKSRSHSPTKSSHSQSPGKSQSRSRSRSRSKERASKPKSEHGSRSRSTSRGKQERSRSRSKGLVERSRSRSKENEERSRSRSKGMDERSRSRSKTQDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKGKDERSRSRSKAKDESSCSRSKDNRERSLSPSKSKHDRSRSQGKHERSGSRSKSKRDRSGS 437

HSP 2 Score: 81.6481 bits (200), Expect = 5.960e-13
Identity = 103/200 (51.50%), Postives = 123/200 (61.50%), Query Frame = 0

Query:  179 HGRRLRVFKDRNASRSRSRSKSD---SRSRS-----RSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGE----KRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR---RSKSKSPRDKSRSRSK 363
            HG R R        RSRSRSK     SRSRS     RSRSRS+G D RS   RSRS+T  DRSRS+S+ +    + RSK+  DRSRSRSK+  D+SRSRSK+  D+SRSRSK   ++SRSR         SK+  + + SRSK  R++S S SKS  D  RSRS    E+S SRSKS RDR   RSKSK  R  S S+SK
Sbjct:  268 HGSRSRSTSRGKQERSRSRSKGLVERSRSRSKENEERSRSRSKGMDERS---RSRSKTQDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKGKDERSRSR---------SKAKDESSCSRSKDNRERSLSPSKSKHD--RSRSQGKHERSGSRSKSKRDRSGSRSKSKQERSSSWSKSK 453

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1101402288|ref|XP_018912282.1| (PREDICTED: serine-arginine protein 55-like isoform X2 [Bemisia tabaci])

HSP 1 Score: 254.218 bits (648), Expect = 4.293e-78
Identity = 160/308 (51.95%), Postives = 197/308 (63.96%), Query Frame = 0

Query:    6 GYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEK------------YGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSP-KDKSRSRSRSPQAKASSKSP 300
            G RV+VG L Y  RERD+E+FF+ F R+R++ +K G YGFVEFDDYRDADDAVYELNG+ELMGER+ +EHARG  R RG    RD  G GG  R  R  W++K            YGPPTRT +RIIVENLSSRVSWQDLKD MR+AG+VTYA+AH  RRNEGVVEF    DM  A+DK +D +LHGRR+R+ +DR     RSRS S                +RS R    + +            + R+KSP     SRSKS    S+S+S+SP  K RSRS S  K +SR RS SP+A+++S+SP
Sbjct:    3 GSRVYVGGLPYGVRERDLERFFKGFGRIRDVLLKNG-YGFVEFDDYRDADDAVYELNGKELMGERIVVEHARGTDRTRG----RDRFGSGGPPR--RRQWLDKRGPFGSSRRRNEYGPPTRTEHRIIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFSTYSDMKTAIDKLDDTELHGRRIRLVEDRGRGSRRSRSSSSRSRSRSRSRSR----SRSRRRSPSASSRSRSRSRSRSNSRARTKSP-----SRSKSRDRDSKSKSRSPISKKRSRSHSVSKKQSRERSVSPKARSTSRSP 294

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1050358363|gb|OCT60569.1| (hypothetical protein XELAEV_18046593mg [Xenopus laevis])

HSP 1 Score: 261.536 bits (667), Expect = 7.107e-77
Identity = 201/416 (48.32%), Postives = 270/416 (64.90%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWV---EKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRS-RSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSP------------------------GDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSR--SPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDRRSKSKSPRDKSRSRSKSPQEQRRSRSPSPTLRERSNSRSPKEESKS 393
            RV++G L Y  RE+D+++FF  + ++  I +K G YGFVEF+D RDADDAVYELNG++L GERV IEHARGPRRDR         G G G R G  N     +KYGPP RT +R++VENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RA++K +  +++GRR+R+ + +   R   S S S SRSRSR RSRSR R    SRSRS+SR+P  +SRS+S  +   S+SP                        G +SRS S+  +D+SRSRSK   ++SRSRS+    +SRSRS+    ++++ +K   D++ SRSK+  D+SRS SK   D +RSRS    ++SRSRSK  R  RS+SK+  D+SRSRSK+  ++ RSRS S   R RS S++  + S+S
Sbjct:    3 RVYIGRLGYHVREKDLQRFFGGYGKLLEIDLKNG-YGFVEFEDSRDADDAVYELNGKDLCGERVIIEHARGPRRDRD--------GYGYGSRSGYRNQRTGRDKYGPPVRTEFRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAVEKLDGTEINGRRIRLVEGKTRHRRPYSGSHSRSRSRSRRRSRSRSRHPSHSRSRSQSRSPAKKSRSRSLAKSSHSQSPGKSQSRSRSRSRSKERSSKPKSLHGSQSRSISRGKQDRSRSRSKGLVERSRSRSREDYVRSRSRSKGMGERSRSWAKVKDDRSHSRSKAKDDRSRSRSKVKDDRSRSRSKAKDDRSRSRSKDDRS-RSRSKAKDDRSRSRSKAKDDRSRSRSKSKDDRSRSRSKAKDDRSRS 408

HSP 2 Score: 97.0561 bits (240), Expect = 8.131e-18
Identity = 112/219 (51.14%), Postives = 143/219 (65.30%), Query Frame = 0

Query:  178 LHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRS--KSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR-RSKSKSPRDKSRSRSKSPQEQRRSRSPSPTLRERSNSRSPKEESKS 393
            LHG         + SRS SR K D     RSRSRS+G   RS RSRSR    + RSRSK  GE+ RS  K   DRS SRSK+  D+SRSRSK   D+SRSRSK+  D+SRSRS+  ++++ SK+  D++RSRSK+  D+SRS SKS  D +RSRS    ++SRSRSKS  DR RS+SK+  D+SRSRSK+  ++ RSRS +    ERS SRS  ++  S
Sbjct:  260 LHG---------SQSRSISRGKQD-----RSRSRSKGLVERS-RSRSREDYVRSRSRSKGMGERSRSWAKVKDDRSHSRSKAKDDRSRSRSKVKDDRSRSRSKAKDDRSRSRSKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKSKDDRSRSRSKAKDDRSRSRSKSKDDRARSRSKAKDDRSRSRSKAKDDRSRSRSKAKD--ERSRSRS--KDEMS 459

HSP 3 Score: 84.7297 bits (208), Expect = 8.003e-14
Identity = 105/217 (48.39%), Postives = 142/217 (65.44%), Query Frame = 0

Query:  193 RSRSRSKS-DSRSRS-------RSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSP--QAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSK------SPRDRRSKSKSPRDKSRSRSKSPQEQRRSRSPSPTLRERSNSRSPKEESKS 393
            RSRSRSK    RSRS       RS SRS+ +D RS RSRS+ +  + RSRSK++ ++ RS+S  DRSRSRSK+  D+SRSRSK+  D+SRSRSKS  D+SRSRS++   ++++ SKS  D+ RSRSK+  D+SRS SK+  D +RSRS    E+SRSRSK        R+ R +S+SP      RS+S  +   S S S + R+RS SRS  ++ +S
Sbjct:  297 RSRSRSKGMGERSRSWAKVKDDRSHSRSKAKDDRS-RSRSKVKDDRSRSRSKAKDDRSRSRSKDDRSRSRSKAKDDRSRSRSKAKDDRSRSRSKSKDDRSRSRSKAKDDRSRSRSKSKDDRARSRSKAKDDRSRSRSKAKDDRSRSRSKAKDERSRSRSKDEMSLSRSRENRERSRSPSKSKHDRSRSQGKHEMSGSRSKSKRDRSGSRSTSKQERS 512

HSP 4 Score: 72.4034 bits (176), Expect = 6.658e-10
Identity = 97/188 (51.60%), Postives = 120/188 (63.83%), Query Frame = 0

Query:  192 SRSRSRSKSD-SRSRS---RSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDRR--------SKSKSPRDKSRSRSKSPQE 367
            SRSRS++K D SRSRS   RSRSRS+ +D    RSRSRS+   DRSRS       RSKS  DRSRSRSK+  D+SRSRSKS  D++RSRSK+  D+SRSR         SK+  D++RSRSK+  ++SRS SK     +RSR +  R +S S+SK  R R         S+SKS RD+S SRS S QE
Sbjct:  342 SRSRSKAKDDRSRSRSKDDRSRSRSKAKD---DRSRSRSKAKDDRSRS-------RSKSKDDRSRSRSKAKDDRSRSRSKSKDDRARSRSKAKDDRSRSR---------SKAKDDRSRSRSKAKDERSRSRSKDEMSLSRSRENRERSRSPSKSKHDRSRSQGKHEMSGSRSKSKRDRSGSRSTSKQE 510

HSP 5 Score: 68.5514 bits (166), Expect = 1.364e-8
Identity = 88/167 (52.69%), Postives = 111/167 (66.47%), Query Frame = 0

Query:  192 SRSRSRSKSDSRSRSRSRSRSRGRDARSSRSRSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRSRSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSPRDKSRSNSKSPRDETRSRSDPPREKSRSRSKSPRDR---RSKSKSPR 355
            SRSRS++K D     RSRSRS+ +D    RSRSRS++  DRSRS       RSK+  DRSRSRSKS  D++RSRSK+  D+SRSRSK+  D+SRSRS++   ++ S+S  + + SRS+  R++SRS SKS  D  RSRS    E S SRSKS RDR   RS SK  R
Sbjct:  362 SRSRSKAKDD-----RSRSRSKAKD---DRSRSRSKSKDDRSRS-------RSKAKDDRSRSRSKSKDDRARSRSKAKDDRSRSRSKAKDDRSRSRSKAKDERSRSRSKDEMSLSRSRENRERSRSPSKSKHD--RSRSQGKHEMSGSRSKSKRDRSGSRSTSKQER 511

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|225712276|gb|ACO11984.1| (Serine-arginine protein 55 [Lepeophtheirus salmonis])

HSP 1 Score: 245.743 bits (626), Expect = 1.403e-74
Identity = 125/187 (66.84%), Postives = 150/187 (80.21%), Query Frame = 0

Query:    1 MPSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRR--DRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRV 185
            MPSREG RVF+GNL Y  RERD+E+FF+++ RV NIFIK GKYGF EFDDYRDADDAVY+LNG EL  ER+T+EHARG RR   R         G  G    GR     KYGPPTRTNYR+IVENLS+RVSWQDLKD+MR+AG+VT+A+AHND+RNEGVVEF  RRDM+RA+DKF++++LHGRR+R+
Sbjct:    1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGYRGDRYRGRRGGRGKYGPPTRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGRRIRL 187

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|290562251|gb|ADD38522.1| (Serine-arginine protein 55 [Lepeophtheirus salmonis])

HSP 1 Score: 244.973 bits (624), Expect = 2.967e-74
Identity = 126/189 (66.67%), Postives = 151/189 (79.89%), Query Frame = 0

Query:    1 MPSREGYRVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRR----DRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRV 185
            MPSREG RVF+GNL Y  RERD+E+FF+++ RV NIFIK GKYGF EFDDYRDADDAVY+LNG EL  ER+T+EHARG RR      G   G    G  G    GR     KYGPPTRTNYR+IVENLS+RVSWQDLKD+MR+AG+VT+A+AHND+RNEGVVEF  RRDM+RA+DKF++++LHGRR+R+
Sbjct:    1 MPSREGCRVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYRDADDAVYKLNGCELNSERITVEHARGGRRAEGRSSGGSGGGGGGGYRGDRYRGRGGGRGKYGPPTRTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGRRIRL 189

[Close]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Match: gi|1072256151|ref|XP_018413184.1| (PREDICTED: serine/arginine-rich splicing factor 6 isoform X1 [Nanorana parkeri])

HSP 1 Score: 249.98 bits (637), Expect = 9.624e-74
Identity = 152/317 (47.95%), Postives = 199/317 (62.78%), Query Frame = 0

Query:    8 RVFVGNLHYDARERDVEKFFQKFARVRNIFIKPGKYGFVEFDDYRDADDAVYELNGRELMGERVTIEHARGPRRDRGPRSGRDSAGGGGGGRGGRANWVEKYGPPTRTNYRIIVENLSSRVSWQDLKDLMRKAGDVTYANAHNDRRNEGVVEFGCRRDMDRALDKFEDYDLHGRRLRVFKDRNASRSRSRSKSDSRSRSRSRSRSRGRDARSSRS----------RSRSRTPKDRSRSKSRGEKRRSKSPGDRSRSRSKSPKDKSRSRSKSPKDKSRS---RSKSPKDKSRSRSRSPQAKASSKSPRDKTRSRSKSP 311
            RV++G L Y  RE+D+++FF  + ++  + +K G YGFVEF+D RDADDAVYELNG++L GERV +EHARGPRRDR    G  S G   G R  R+   +KYGPP RT +R+IVENLSSR SWQDLKD MR+AG+VTYA+AH +R NEGV+EF    DM RALDK +  +++GR++R+ + +   R               R         S             ++ SR+P  RSRS+S G+  RS+SPG RSRSR  SP   SRSRS   + +SRS   RS++     +SRSRSP  K+SS+SP    RSRS +P
Sbjct:    3 RVYIGRLSYHVREKDIQRFFGGYGKLLEVDLKNG-YGFVEFEDSRDADDAVYELNGKDLCGERVIVEHARGPRRDR---EGYSSFGNRSGYRSQRSGR-DKYGPPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRALDKLDGTEINGRKIRLVESKARHRRSYSGSRSRSRSRSRRRSRSRSRHSSHSQSRSPSRSPSKKTHSRSPGKRSRSRSPGKGSRSRSPGKRSRSR--SPGKGSRSRSPGKRSRSRSPAKRSRTLSPAKKSRSRSPAKKSSSRSP--AKRSRSHTP 310

The following BLAST results are available for this feature:

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 9


Match Name	E-value	Identity	Description
EMLSAG00000005475	4.826e-78	67.02	supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 ge...	[more]
EMLSAG00000007146	8.737e-60	51.98	supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1...	[more]
EMLSAG00000002605	1.729e-49	49.74	supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 g...	[more]
EMLSAG00000009359	7.799e-38	44.44	supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-...	[more]
EMLSAG00000008203	4.397e-21	40.57	supercontig:LSalAtl2s:LSalAtl2s495:117181:128694:1...	[more]
EMLSAG00000003940	2.640e-8	33.33	supercontig:LSalAtl2s:LSalAtl2s211:7865:12537:1 ge...	[more]
EMLSAG00000005276	2.839e-8	39.13	supercontig:LSalAtl2s:LSalAtl2s2821:6099:8923:1 ge...	[more]
EMLSAG00000007190	4.577e-8	36.36	supercontig:LSalAtl2s:LSalAtl2s404:347783:355385:1...	[more]
EMLSAG00000001436	4.990e-8	32.53	supercontig:LSalAtl2s:LSalAtl2s1245:53540:55574:-1...	[more]

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|20978758\|sp\|Q8VE97.1\|SRSF4_MOUSE	2.056e-70	59.34	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|20981726\|sp\|Q08170.2\|SRSF4_HUMAN	3.618e-69	59.34	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|78099805\|sp\|P26686.4\|SRR55_DROME	3.108e-62	60.00	RecName: Full=Serine-arginine protein 55; Short=SR...	[more]
gi\|20981728\|sp\|Q13247.2\|SRSF6_HUMAN	8.344e-62	52.53	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|122145041\|sp\|Q3B7L6.1\|SRSF6_BOVIN	2.076e-61	52.53	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|1168968\|sp\|Q09167.1\|SRSF5_RAT	2.662e-47	48.72	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|3929378\|sp\|Q13243.1\|SRSF5_HUMAN	2.893e-47	48.72	RecName: Full=Serine/arginine-rich splicing factor...	[more]
gi\|56749459\|sp\|Q23120.1\|RSP2_CAEEL	1.720e-35	40.10	RecName: Full=Probable splicing factor, arginine/s...	[more]
gi\|56749460\|sp\|Q23121.1\|RSP1_CAEEL	3.497e-35	36.53	RecName: Full=Probable splicing factor, arginine/s...	[more]
gi\|3929368\|sp\|O22315.1\|SR34_ARATH	6.184e-29	43.72	RecName: Full=Serine/arginine-rich-splicing factor...	[more]

Pages

BLAST of arginine serine-rich splicing factor 4 isoform 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1069306015\|ref\|XP_018096689.1\|	5.292e-90	47.62	PREDICTED: splicing factor, arginine/serine-rich 6...	[more]
gi\|1338835901\|ref\|XP_023660799.1\|	2.070e-85	46.81	LOW QUALITY PROTEIN: serine/arginine-rich splicing...	[more]
gi\|1101402290\|ref\|XP_018912284.1\|	5.870e-82	54.05	PREDICTED: serine-arginine protein 55-like isoform...	[more]
gi\|1043408518\|gb\|OCA21153.1\|	6.107e-81	42.86	hypothetical protein XENTR_v90025385mg [Xenopus tr...	[more]
gi\|47575808\|ref\|NP_001001248.1\|	1.190e-80	42.79	arginine/serine-rich splicing factor 4 isoform 1 [...	[more]
gi\|1101402288\|ref\|XP_018912282.1\|	4.293e-78	51.95	PREDICTED: serine-arginine protein 55-like isoform...	[more]
gi\|1050358363\|gb\|OCT60569.1\|	7.107e-77	48.32	hypothetical protein XELAEV_18046593mg [Xenopus la...	[more]
gi\|225712276\|gb\|ACO11984.1\|	1.403e-74	66.84	Serine-arginine protein 55 [Lepeophtheirus salmoni...	[more]
gi\|290562251\|gb\|ADD38522.1\|	2.967e-74	66.67	Serine-arginine protein 55 [Lepeophtheirus salmoni...	[more]
gi\|1072256151\|ref\|XP_018413184.1\|	9.624e-74	47.95	PREDICTED: serine/arginine-rich splicing factor 6 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold157_size297442	supercontig	scaffold157_size297442:276622..279137 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold157_size297442-snap-gene-1.28-mRNA-1	maker-scaffold157_size297442-snap-gene-1.28-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold157_size297442:276622..279137-

gene from alignment at scaffold157_size297442:276622..279137-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold157_size297442-snap-gene-1.28 ID=maker-scaffold157_size297442-snap-gene-1.28|Name=arginine serine-rich splicing factor 4 isoform 1|organism=Tigriopus kingsejongensis|type=gene|length=2516bp|location=Sequence derived from alignment at scaffold157_size297442:276622..279137- (Tigriopus kingsejongensis)
CCGTGGCACTCCCCGTGGCACTCCCCGTGGCCAGTCGCCGCCTCTTCGTC
CCACTCCGGACTCTTGAGCCGCGCCGCCCGGCAAACTCGGCTGAGGTGGG
CCTAGTCGGGACTCAGGATGCCCTCCCGAGAGGGATATCGCGTGTTTGTG
GGCAATTTGCACTACGACGCCCGCGAACGCGACGTGGAGAAGTTCTTCCA
GAAGTTTGCCCGCGTCCGCAACATCTTCATTAAGCCCGGCAAATACGGCT
TCGTGGTGAGTTCTGATCCCGTTTCTCTCTCGCTTCTAGGTGCCACTGAG
CCACGGAGTGTGGGCTGGTAGGTTGTTGTGAGGGAGCCGACCCGCCGGTT
AAGGGTTGGGCACTGGACCGGTTGGACGAGGGGTCAAAGTCGAAGGGCCA
CAATCGGCGATCAATCTCCATCATCTGGCTGTTCGATCGCTCGATTCTGG
GCACGTTGTGAGTGAGACTTGAACGAGGGCGCCTGAGTCAGTCTCGTCAC
TCTTTCAGGCCCGCCCAGAGCACTAGTGTCTTGACCCGCCTCTGGCGTGC
CCCAAAGCACTCATGAGAGACCGTCCCAAGTCCAGCACCACCTTTCGGGT
CTACATTGGCGGACTGCCCCGTCAAGCCCAAATGGCGGATGTCAAAGAGT
TTTTCCACAAATACCGACGCAGATTTGACGTGCTCCTCAAGTCCGGATTC
GGCTTCATTGTGAGTGACGGGTCGGCCCGTCACCGAGACTAGAGAACGTG
GGGCTGTGAAGCAGGAGTTGACCGGCCTTGAACAATTTGTGCTTCTTTCA
GGAATTTGACGACTATCGCGATGCCGATGATGCTGTGTACGAGTTGAACG
GGCGAGAGCTCATGGGTGAGCGGGTCACCATCGAACACGCGCGAGGACCG
CGCCGCGACCGTGGTCCCCGCAGTGGTCGGGACTCTGCCGGTGGTGGTGG
TGGCGGCCGTGGTGGACGTGCCAATTGGGTGGAGAAGTACGGCCCACCCA
CCCGCACTAACTACCGGATCATCGTGGAGAATCTCTCTTCGCGAGTGTCT
TGGCAGGTGAGTTTTTCACCCAGACGCGCGTTCGGTCTCGGGTAGCCCTA
CTGATCCCTCTTATGTTCGAGGCCCTTCTGAGCACGTGACTGACAGTACC
TCTCTGATGCTGGGCTGACCTCCGAAGTGTGTCGTTCGAGTAATCTGATG
TGGGGGGACGAGCGCCTCTCGTCACTTGTCTGGGTCGGGAGAACGAAAAG
TGAAGCTTCGAATTCAGCTCCGACGTCATGGTCGCGAGCCCGAGCTACAA
AGGTACTAGGCCTAATCTCAATTTCTTCAGTCTGAAGGCACTCATCGGTG
AAAGGGTCATTTTTTTATACGTATTCGATTGGATGTGGCAACCACGATAT
GGTGGACCCGATGACCTCTCCCGGCTTCAGTTGGTGTAGATAAGGCTCAT
CGAGCCGCTGTCCCGCCACATTGCCAACGGAGATCTAGAGCCTTGGAATA
ATGAAAGCAAGATTGATACGATTTTCTTTGCAGGATTTGAAAGATCTCAT
GCGTAAAGCCGGAGACGTCACCTATGCAAATGCTCACAACGATCGCCGGA
ATGAAGGGTAAGTCCGGACACGTTCGTTCGATCGCATTCCGTTTCCAACA
TATTAGCCCTTTCCAGCGTTGTCGAGTTTGGCTGCCGTCGGGATATGGAC
CGAGCCTTGGACAAATTCGAAGACTACGATCTCCATGGTCGCCGCCTCCG
GGTGTTCAAGGATCGTAATGCTTCCCGCTCGCGATCACGCTCCAAGTCGG
ACTCGCGCTCCAGGTCTCGATCGCGCTCCCGATCCCGTGGGCGTGATGCT
CGATCCAGCCGTTCAAGGTCTCGATCCCGAACCCCCAAGGATCGAAGCCG
ATCCAAGTCTCGCGGGGAGAAGAGACGATCCAAATCGCCAGGGGACAGAA
GCCGATCGAGGTCCAAATCACCCAAGGATAAGAGTCGATCCAGGTCCAAA
TCACCCAAGGACAAGAGTCGATCCAGGTCCAAATCACCCAAGGACAAGAG
TCGATCCAGATCGCGATCCCCCCAAGCGAAGGCCAGCTCCAAGTCTCCGC
GAGACAAGACCCGCTCGCGATCCAAGTCTCCGCGAGACAAGAGTCGCTCC
AACTCCAAGTCTCCAAGAGATGAGACTCGCTCCAGATCCGACCCTCCCCG
AGAAAAGAGTCGTTCGCGTTCCAAGTCTCCTCGAGATAGGCGCTCAAAAT
CAAAGTCGCCCCGGGACAAGAGTCGATCCAGGTCAAAGTCACCTCAAGAG
CAAAGGCGATCCAGGTCTCCATCACCCACTTTGCGGGAACGGAGTAACTC
CAGGAGCCCCAAAGAGGAATCAAAGTCCCCCGAAAGAAGCGAGCGCAAGC
GATCTGCCTCGCCAGAGACCGAGTCTGAGGCTAAACGCCCCCGTGTGTCG
GACAGCAAGGAAGAAGCTCCCCAAGAGAGCGAAGTGTCCAATGGCGATGA
TGTTGCACAAGGATGA

Synonyms

The feature 'arginine serine-rich splicing factor 4 isoform 1' has the following synonyms


Synonym
Tk02805

Add to Basket

Pages

Pages

Search form