trimeric intracellular cation channel type b, maker-scaffold1679_size31325-snap-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of trimeric intracellular cation channel type b vs. L. salmonis genes
Match: EMLSAG00000012618 (supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 gene:EMLSAG00000012618 transcript:EMLSAT00000012618 description:"maker-LSalAtl2s94-augustus-gene-0.17") HSP 1 Score: 116.701 bits (291), Expect = 1.679e-30 Identity = 76/222 (34.23%), Postives = 125/222 (56.31%), Query Frame = 0 Query: 15 LDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGR---NHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQ------FGYSNDVIYLALVGLFMSVKI 227 LD N Q ++YP FDL H + C+++IR+E G ++ KHP + W +L FAGS+LAN LLG+P+L K+ LL AT+++ +F+ P DV + + P+ A+KEVYRAKK++ G+ SK +P++ + V +I +KG G +F+ R + P + E+ +PS +TK C+ AL+ + + ++YL +V F+ K+ Sbjct: 7 LDVAN-QVTRLKMYPVFDLAHSVCCLLAIREELGSEGISYSRKHPLSCWITSMLVIFAGSVLANFLLGEPMLTPLKNNNQLLIATMVWFGIFYLPFDVGYKICKFLPIKIMCAALKEVYRAKKVHDGVYHASKLFPNA-YIVMIIIGAIKGXGQSFITVAERLXRGIWTPEA-QEILRPSFSTKACIAAALVFVVDRKXDLISAPHALVYLMVVSFFVYFKV 225
BLAST of trimeric intracellular cation channel type b vs. L. salmonis genes
Match: EMLSAG00000001482 (supercontig:LSalAtl2s:LSalAtl2s1252:64118:66511:-1 gene:EMLSAG00000001482 transcript:EMLSAT00000001482 description:"maker-LSalAtl2s1252-augustus-gene-0.16") HSP 1 Score: 103.219 bits (256), Expect = 9.047e-26 Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 20 LQGLPKRLYPWFDLCHVLLCVVSIR----KEAGRNHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQFGYSNDVIYLALVGLFMSVKISGIIGQAV 235 L LPK FDL H +LC+ R +E +N KHPF+ W + ++ FAG +L P+ G+ LDA +D ++ A++I+ LVF+ + + L V L +K +Y KKI GI K + + F LI V+KGNGS FM P R + K PS TTK +L + + F D+ Y+ VGL +++K+ + G V Sbjct: 146 LYDLPKNYSHVFDLVHFILCIQGERNDMSEEDFKNIPRKHPFSLWLSSMMVCFAGGILLGPIAGEAALDAMEDGSKIIMASMIWYLVFYV--EPAYELSKKFGVKVPLYVIKGLYYPKKILGGIRFAKKEFKRN-IFALILIPVVKGNGSGFMKPFARLVRMSGKVSEGIGTLNPSTTTKYVLLATIANIVF--PGDLAYIGSVGLMIAMKVGPLFGLNV 360
BLAST of trimeric intracellular cation channel type b vs. L. salmonis genes
Match: EMLSAG00000001710 (supercontig:LSalAtl2s:LSalAtl2s1296:53657:58587:1 gene:EMLSAG00000001710 transcript:EMLSAT00000001710 description:"maker-LSalAtl2s1296-snap-gene-0.19") HSP 1 Score: 70.4774 bits (171), Expect = 4.033e-14 Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 0 Query: 22 GLPKRLYPWFDLCHVLLCVVSIRKEAGRNHGHK-HPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEV 129 LP RLYP F++C S+ + R HGH+ + FA W+A I AG+LL + LLGKP ++AF + + T+++ + CP ++ +L+ P++ + A K + Sbjct: 516 NLPLRLYPLFEICDA----ASVSLKLKREHGHRVNIFALWSATIFNCHAGNLLTHILLGKPTINAFSNVEYIALVTLVFVSILLCPKNMIDTLLQVTPIHGSMKAKKNI 620
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|75023742|sp|Q9NA73.2|T38B2_CAEEL (RecName: Full=Trimeric intracellular cation channel type 1B.2; Short=TRIC-1B.2; AltName: Full=TRIC-B2) HSP 1 Score: 141.354 bits (355), Expect = 3.600e-39 Identity = 82/228 (35.96%), Postives = 129/228 (56.58%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNH---GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQFGYS------NDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSV 244 +LYP+FD H +L +S+R + G + KHPF+ W +C+L SFAGS L+ LLG+PI+ K +L ++++ LVF+ P DV F L T PV GL +KEV R KI AG+ + YP+S + V L+ V KG GS + I +L + + E+ +PS TTK C++ +++ +S +D++YL +VG F+ K++ + D PI++V Sbjct: 26 KLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCMLMSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIAAGVKHAVRIYPES-YLVQILVGVAKGAGSG-VVKIVEQLARGTWHPTNHEILRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPIENV 251
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|1210274813|sp|Q9NA75.2|T38B1_CAEEL (RecName: Full=Trimeric intracellular cation channel type 1B.1; Short=TRIC-1B.1; AltName: Full=TRIC-B1) HSP 1 Score: 138.658 bits (348), Expect = 2.046e-38 Identity = 78/229 (34.06%), Postives = 131/229 (57.21%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNHG---HKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGA-LLMLQ-----FGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 ++YP+FD+ H LL ++ +R + G KHP + W + +L FA + LAN LLG+P++ FK ++ AT+I+ LVF+ P D + + PV L +KEV RA K+ G+ +K YP+S + V L+ KG GS + + + + + P + +EL +PS TK C++ A +L L+ +D++YL +VG F+ K+S +I DPF+PI++++ Sbjct: 25 KMYPYFDVAHYLLMIIEVRDDLGSAASIFSRKHPLSCWLSSMLMCFADAFLANFLLGEPVIAPFKRHDDIILATIIWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHGVSHAAKLYPNS-YIVQVLVGTAKGAGSGIVRTLEQLVRGVWLP-THNELLRPSFATKACVVAASVLALEKSGTYLTAPHDLVYLVIVGFFVYFKLSAVILHVTDPFAPIENLF 251
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|74733603|sp|Q9H6F2.1|TM38A_HUMAN (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 100.138 bits (248), Expect = 1.005e-23 Identity = 66/200 (33.00%), Postives = 107/200 (53.50%), Query Frame = 0 Query: 5 MESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNH-GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 ME L+ + G + + +P L+P FDL + ++ ++ ++ E G +HP A+W +L F +LA+ LLG+P++D F + +L A+ ++ L+FFCP D+F+ V PV A+KEV R +KI GI Y WFV +KG+G A M+ + L + KP + +E+ S TK + GA+L Sbjct: 1 MELLSALSLGELALSFSRVP--LFPVFDLSYFIVSILYLKYEPGAVELSRRHPIASWLCAMLHCFGSYILADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVRKIAVGIHHAHHHYHHG-WFVMIATGWVKGSGVALMSNFEQLLRGVWKPET-NEILHMSFPTKASLYGAIL 196
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|160358755|sp|A5A6S6.1|TM38A_RABIT (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=Mitsugumin-33A; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 98.9821 bits (245), Expect = 2.302e-23 Identity = 64/200 (32.00%), Postives = 108/200 (54.00%), Query Frame = 0 Query: 5 MESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNH-GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 ME L+ + G + + +P L+P FDL + ++ ++ ++ E G +HP A+W +L F +LA+ LLG+P++D F + +L A+ ++ L+FFCP D+F+ V PV A+KEV R +KI GI Y WF+ +KG+G A ++ + + L + KP + +E+ S TK + GA+L Sbjct: 1 MELLSALSLGELALSFSRVP--LFPVFDLSYFIVSILYLKYEPGAVELSRRHPVASWLCAMLHCFGSYILADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVRKIAVGIHHAHHHY-HHGWFIMIATGWVKGSGVALLSNVEQLLRGVWKPET-NEILHMSFPTKASLYGAIL 196
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|150416160|sp|A4FV75.1|TM38A_BOVIN (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 98.9821 bits (245), Expect = 2.900e-23 Identity = 65/200 (32.50%), Postives = 106/200 (53.00%), Query Frame = 0 Query: 5 MESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNH-GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 ME L+ + G + + +P L+P FDL + ++ ++ ++ E G HP A+W +L F +LA+ LLG+P++D F + +L A+ ++ L+FFCP D+F+ V PV A+KEV R +KI GI Y WFV +KG+G M+ + + L + KP + +E+ S TK + GA+L Sbjct: 1 MELLSALSLGELALSFSRVP--LFPVFDLSYFIVSILYLKYEPGAVELSRHHPMASWLCAMLHCFGSYILADLLLGEPVIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVRKIAVGIHHAHHHY-HHGWFVMIATGWVKGSGVTLMSNLEQLLRGVWKPET-NEILHMSFPTKASLYGAIL 196
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|121957073|sp|Q3TMP8.2|TM38A_MOUSE (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=27 kDa sarcoplasmic reticulum protein; AltName: Full=Mitsugumin-33A; AltName: Full=SPR-27; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 98.5969 bits (244), Expect = 3.540e-23 Identity = 63/200 (31.50%), Postives = 107/200 (53.50%), Query Frame = 0 Query: 5 MESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNH-GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 M +L+L L + + L+P FDL + ++ ++ ++ E G +HP A+W +L F +LA+ LLG+PI+D F + +L A+ ++ L+FFCP D+F+ V PV A+KEV R +KI GI + + WF+ +KG+G A ++ + + L + KP + +E+ S TK + GA+L Sbjct: 4 MSALSLGELALSFSRVP-----LFPVFDLSYFIVSIIYLKYEPGAVELSRRHPVASWLCAMLHCFGSYILADLLLGEPIIDYFSNSSSILLASGVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVRKIAVGIHH-AHHHYHHGWFIMIATGWVKGSGVALLSNVEQLLRGVWKPET-NEILHMSFPTKASLYGAIL 196
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|160358756|sp|A6ZIQ8.1|TM38A_RAT (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=27 kDa sarcoplasmic reticulum protein; AltName: Full=SPR-27; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 97.8265 bits (242), Expect = 7.077e-23 Identity = 59/178 (33.15%), Postives = 98/178 (55.06%), Query Frame = 0 Query: 27 LYPWFDLCHVLLCVVSIRKEAGRNH-GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 L+P FDL + ++ ++ ++ E G +HP A+W +L F +LA+ LLG+PI+D F + +L A+ ++ L+FFCP D+F+ V PV A+KEV R +KI GI + WF+ +KG+G A ++ + + L + KP + +E+ S TK + GA+L Sbjct: 21 LFPVFDLSYFIVSIIYLKYEPGSVELSRRHPVASWLCAMLHCFGSYILADLLLGEPIIDYFSNSSSILLASGVWYLIFFCPLDLFYKCVCFLPVKLIFVAMKEVVRVRKIAVGIHHAHHY--HHGWFIMIATGWVKGSGVALLSNLEQLLRGVWKPET-NEILHMSFPTKASLYGAIL 195
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|82241425|sp|Q7ZVP8.1|TM38B_DANRE (RecName: Full=Trimeric intracellular cation channel type B; Short=TRIC-B; Short=TRICB; AltName: Full=Transmembrane protein 38B) HSP 1 Score: 93.2041 bits (230), Expect = 3.391e-21 Identity = 65/202 (32.18%), Postives = 109/202 (53.96%), Query Frame = 0 Query: 3 FKMESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGR-NHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL 203 F +LN AFGL LP ++P+FD+ H ++ V+S+R++ G + P A W + +L F G++L+ +L + + LL AT+++ LVF+CP DV +SL + P+ L A+KEV R K+ +G+ + Y D+ FV + KG G ++ + + + KP + +EL K S TK +LGA++ Sbjct: 4 FAFFNLNELAFGLSK-----LP--MFPYFDMAHYIISVMSLREQPGALCVSQRSPLACWFSSMLYCFGGAVLSALMLADAPVAPLSNTTNLLLATLMWYLVFYCPLDVVYSLASLLPLRLVLTAMKEVTRTWKVLSGVSQAGSKYSDA-LFVMVAVGWAKGAGGGLISNFEQLVRGVWKPET-NELLKMSYPTKVTLLGAVV 196
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|82184128|sp|Q6GN30.1|T38BB_XENLA (RecName: Full=Trimeric intracellular cation channel type B-B; Short=TRIC-B-B; Short=TRICB-B; AltName: Full=Transmembrane protein 38B-B) HSP 1 Score: 91.2781 bits (225), Expect = 1.394e-20 Identity = 65/236 (27.54%), Postives = 118/236 (50.00%), Query Frame = 0 Query: 15 LDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNHGHKH-PFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALL-MLQFGY----SNDVIYLALVGLFMSVKISGIIGQ-AVDPFSPIDS 243 L ++Q ++P+FD+ H L V+S R++AG H P A+W + +L F G +L++ LL +P + + ++ A+ I+ +V++ P D+F++ P+ +KEV R KI +GI Y D+ W V I +G G ++ + + + KP S +E K S K ++GA+L LQ G+ S + +S+K++ ++ A PF P+++ Sbjct: 4 LSEVSVQFSQLSMFPFFDMAHYLASVMSAREQAGALDIASHSPMASWFSAMLHCFGGGILSSILLAEPPVGILANTTNIMLASAIWYMVYYFPYDLFYNCFFFLPIRLIAAGMKEVTRTWKILSGITHAHSHYKDA-WLVMITIGWARGAGGGLISNFEQLVRGVWKPES-NEFLKMSYPVKVTLIGAVLFTLQHGHYLPISRHNLMFIYTMFLVSIKVTMMLTHSAGSPFLPLET 237
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Match: gi|82081954|sp|Q5ZK43.1|TM38A_CHICK (RecName: Full=Trimeric intracellular cation channel type A; Short=TRIC-A; Short=TRICA; AltName: Full=Transmembrane protein 38A) HSP 1 Score: 89.3521 bits (220), Expect = 8.510e-20 Identity = 63/224 (28.12%), Postives = 111/224 (49.55%), Query Frame = 0 Query: 27 LYPWFDLCHVLLCVVSIRKEAGR-NHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLM-------LQFGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPID 242 ++P FD + ++ V+ ++ E G K PFA+W +L F +LA+ LLG+ + F + ++ AT ++ L+FFCP ++F+ V+ PV A+KEV R +KI AG+ Y WF+ +KG+G A M+ + L + +P + +E+ S TK + G +L L +N V + + + V ++ A PF+P++ Sbjct: 21 VFPLFDAAYFIVSVLYLKYEPGAVEMSRKSPFASWLCAMLHCFGSYILADLLLGESPIHYFSNNSSVILATAVWYLIFFCPMNLFYKCVSFLPVKLIFVAMKEVVRVRKIAAGVHHAHHQY-HHGWFIMMATGWVKGSGVALMSNFEQLLRGVWRPET-NEILHMSFPTKASLYGTVLFTLQQTHWLPVSEANLVFFFTMFMIVCKVFMTATHSHA-SPFAPVE 241
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1325300060|ref|XP_023331794.1| (trimeric intracellular cation channel type 1B.1-like [Eurytemora affinis]) HSP 1 Score: 206.453 bits (524), Expect = 1.281e-62 Identity = 105/259 (40.54%), Postives = 163/259 (62.93%), Query Frame = 0 Query: 13 FGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRNHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLML--QFGY-----SNDVIYLALVGLFMSVKISGIIGQAVDPFSPID--------SVWNSFVEEADKKD 256 GL + LQ +P +P+FD+CH +L +++RKE G +P ATW A + ASFAGS++ANPLLGKP+ A DE+ L AT+++ VF+ P D+ + ++ ++ VY +C +KE+YRAKK GI + +K YPD + + + ++KGNGS FM PI R + PGS SEL K SVT+K C++ A+LM+ + G+ S D++YL +VG+F+ VK++ ++G+ +DPF P+ +WN+ E K+D Sbjct: 11 LGLSAAKLQSMPANWFPYFDICHYILAALAVRKEVGVPFSRNNPLATWVATLTASFAGSMIANPLLGKPVFGAVSDEYNLYLATLVWWAVFYSPADIVYKVLKNQAVYLPICVLKEIYRAKKTLGGISDAAKLYPDHE-LIQITVGLIKGNGSGFMKPITRLVCGTWVPGS-SELLKMSVTSKGCLVAAVLMVADKAGHIPAPVSGDLLYLGIVGVFILVKLAPLLGEPIDPFKPLQKAVHLLTGDLWNNV--ENIKED 265
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|762083707|ref|XP_011424312.1| (PREDICTED: trimeric intracellular cation channel type B [Crassostrea gigas] >gi|405959633|gb|EKC25646.1| Trimeric intracellular cation channel type B [Crassostrea gigas]) HSP 1 Score: 146.747 bits (369), Expect = 4.826e-39 Identity = 85/231 (36.80%), Postives = 132/231 (57.14%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNHG------HKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGAL--LMLQFGY---SNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 ++YP+FD+ H L V+ R + N KHP + W + +L FAGSL+AN LLG+PIL FKD LL+A+V++ LVF+ P D+ + +V P + +KEV RA K+Y G+V +K YP+S + F I +KG GS M R + L PG+ +E+ +PS TK C L +L LM + Y + ++Y +V F+ K+S ++ DPF+P ++++ Sbjct: 17 KMYPYFDIAHYTLMCVAARDDVPANSSGGTVFSRKHPLSCWVSSMLLCFAGSLIANFLLGEPILTPFKDHKALLTASVVWYLVFYSPFDIVYKMVKFLPCKLAIAGLKEVQRAHKVYHGVVYTAKIYPNSVLIILF-IGTIKGAGSGLMKTFERLVRGLWIPGT-NEVLQPSFVTKACFLASLVFLMEKMNYITAPHALVYFGVVIFFVYFKLSALLLGIHDPFAPFENLF 245
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|225718838|gb|ACO15265.1| (Trimeric intracellular cation channel type B [Caligus clemensi]) HSP 1 Score: 142.895 bits (359), Expect = 8.933e-38 Identity = 81/242 (33.47%), Postives = 137/242 (56.61%), Query Frame = 0 Query: 15 LDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRN---HGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLML------QFGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVWNS 247 LD N Q ++YP FDL H + C+++IR+E G + KHP + W +L FAGS+LAN LLG+P+L K+ ++ AT+++ +F+ P DV + L P A+KEVYRAKK++ G+ SK +P++ + V +I +KGNG AF+ R + P + E+ +P+ +TK C+ A + + + ++YL +V F+ K+S I+ DPF P+++++++ Sbjct: 7 LDVAN-QVTRLKMYPLFDLAHSVCCLLAIREELGSEGIAYSRKHPLSCWITSMLMIFAGSILANLLLGEPVLTPLKNNNNVMMATIVWFCIFYLPFDVGYKLCRFLPFKIICAALKEVYRAKKVHDGVYHASKLFPNA-YVVMIIIGTIKGNGQAFITVAERLARGIWTPEA-QEILRPTFSTKACIAAAFVFVLDRKTDLISAPHALVYLMVVSFFVYFKLSSILLGISDPFVPLENLFSA 245
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1228410609|ref|XP_021964629.1| (trimeric intracellular cation channel type 1B.1-like [Folsomia candida] >gi|1215255460|gb|OXA41796.1| Trimeric intracellular cation channel type A [Folsomia candida]) HSP 1 Score: 142.895 bits (359), Expect = 1.333e-37 Identity = 75/229 (32.75%), Postives = 124/229 (54.15%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRN---HGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQ------FGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 +++P+FD+ H +LC + +R++ G N +HP TW CI FAG +LA+ LG+P+L K LL T ++ ++F+CP D + + PV +KE+YR KK+Y G+ K YP S + + +I +KGNG+ F R L + PG+ E+ +PS TK C+ +L+ L + ++Y +V F+ KIS I+ DPF+P ++++ Sbjct: 17 KMFPYFDIAHAVLCCLHVREDLGANTHPFSRRHPLTTWICCIFEIFAGGMLASLFLGEPVLSPLKSNQHLLLYTAVWYVIFYCPFDAGYKISKFLPVKLTFSVLKEIYRVKKVYDGVTHSLKIYP-SGYLIALIIGTIKGNGAGFCKIFERLLRGVWTPGA-IEILQPSFPTKACIAASLIFLLDKKTEFISAPHSLLYFGIVVFFVYFKISSILLGIHDPFAPFENIF 243
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1242758820|ref|XP_022318472.1| (trimeric intracellular cation channel type 1B.1-like [Crassostrea virginica]) HSP 1 Score: 142.124 bits (357), Expect = 2.692e-37 Identity = 85/231 (36.80%), Postives = 130/231 (56.28%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKE------AGRNHGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGAL--LMLQFGY---SNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 ++YP+FD+ H L V+ R + G KHP + W + +L FAGSL+AN LLG+PIL FKD LL+A+VI+ LV + P D+ + V P + +KEV RA K+Y G+V +K YP+S + LI +KG GS M R + L PG+ +E+ +PS TK C L +L LM + Y + ++Y +V F+ K+S ++ DPF+P ++++ Sbjct: 17 KMYPYFDIAHYTLMCVAARDDVPANSSGGTAFSRKHPLSCWVSSMLLCFAGSLIANFLLGEPILTPFKDHKALLTASVIWYLVCYSPFDIVYKTVKFMPCKLLVAGLKEVQRAHKVYHGVVYTAKIYPNSVIII-LLIGTIKGAGSGLMKTFERLVRGLWIPGT-NEVLQPSFVTKACFLASLVFLMEKMNYITAPHALVYFGVVIFFVYFKLSALLLGIHDPFAPFENLF 245
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1242759942|ref|XP_022319082.1| (trimeric intracellular cation channel type 1B.1-like [Crassostrea virginica]) HSP 1 Score: 141.739 bits (356), Expect = 3.227e-37 Identity = 85/231 (36.80%), Postives = 130/231 (56.28%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNHG------HKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGAL--LMLQFGY---SNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 ++YP+FD+ H L V+ R + N KHP + W + +L FAGSL+AN LLG+PIL FKD LL+A+VI+ LV + P D+ + V P + +KEV RA K+Y G+V +K YP+S + LI +KG GS M R + L PG+ +E+ +PS TK C L +L LM + Y + ++Y +V F+ K+S ++ DPF+P ++++ Sbjct: 17 KMYPYFDIAHYTLMCVAARDDVPANSSGGTVFSRKHPLSCWVSSMLLCFAGSLIANFLLGEPILTPFKDHKALLTASVIWYLVCYSPFDIVYKTVKFMPCKLLVAGLKEVQRAHKVYHGVVYTAKIYPNSVIII-LLIGTIKGAGSGLMKTFERLVRGLWIPGT-NEVLQPSFVTKACFLASLVFLMEKMNYITAPHALVYFGVVIFFVYFKLSALLLGIHDPFAPFENLF 245
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1158599867|ref|XP_020302706.1| (hypothetical protein LOAG_05964 [Loa loa] >gi|393907403|gb|EFO22527.2| hypothetical protein LOAG_05964 [Loa loa]) HSP 1 Score: 141.739 bits (356), Expect = 4.270e-37 Identity = 75/229 (32.75%), Postives = 130/229 (56.77%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNHG---HKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQFGYS------NDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVW 245 R+YP+FDL H +L +S+R + KHP + W + +L FAGS+ AN LLG+P++ FK +L AT+++ VF+ P D+ + + PV LC +KEV R K+ G+ SK YP S + V L+ KG GS + + + + + P +E+ +PS +TK C + +++++ +S +D+IYL +VG F+ K++ ++ DPF+P ++++ Sbjct: 25 RMYPYFDLAHYILMTISVRDDLATGASLFSRKHPLSCWLSSMLMCFAGSISANFLLGEPVIAPFKRHDDILLATIVWYFVFYSPFDIVYKVSKLLPVKVVLCVLKEVRRTSKVVHGVSHASKLYPSS-YLVHILVGTAKGAGSGILRTLEQLVRGVWIPAH-NEVLRPSFSTKACCVASVILVLDRHSRYISAPHDIIYLGIVGFFVYFKLTAVLLNVQDPFAPFENLF 251
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1073548995|pdb|5EIK|A (Chain A, Structure Of A Trimeric Intracellular Cation Channel From C. Elegans In The Absence Of Ca2+) HSP 1 Score: 140.198 bits (352), Expect = 6.215e-37 Identity = 82/228 (35.96%), Postives = 129/228 (56.58%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRN---HGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQFGYS------NDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSV 244 +LYP+FD H +L +S+R + G + KHPF+ W +C+L SFAGS L+ LLG+PI+ K +L ++++ LVF+ P DV F L T PV GL +KEV R KI AG+ + YP+S + V L+ V KG GS + I +L + + E+ +PS TTK C++ +++ +S +D++YL +VG F+ K++ + D PI++V Sbjct: 26 KLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCMLMSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIAAGVKHAVRIYPES-YLVQILVGVAKGAGSG-VVKIVEQLARGTWHPTNHEILRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPIENV 251
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|71998474|ref|NP_496606.2| (Trimeric intracellular cation channel type 1B.2 [Caenorhabditis elegans] >gi|75023742|sp|Q9NA73.2|T38B2_CAEEL RecName: Full=Trimeric intracellular cation channel type 1B.2; Short=TRIC-1B.2; AltName: Full=TRIC-B2 >gi|34556095|emb|CAB55033.2| Trimeric intracellular cation channel type 1B.2 [Caenorhabditis elegans]) HSP 1 Score: 141.354 bits (355), Expect = 1.116e-36 Identity = 82/228 (35.96%), Postives = 129/228 (56.58%), Query Frame = 0 Query: 26 RLYPWFDLCHVLLCVVSIRKEAGRNH---GHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLMLQFGYS------NDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSV 244 +LYP+FD H +L +S+R + G + KHPF+ W +C+L SFAGS L+ LLG+PI+ K +L ++++ LVF+ P DV F L T PV GL +KEV R KI AG+ + YP+S + V L+ V KG GS + I +L + + E+ +PS TTK C++ +++ +S +D++YL +VG F+ K++ + D PI++V Sbjct: 26 KLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCMLMSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIAAGVKHAVRIYPES-YLVQILVGVAKGAGSG-VVKIVEQLARGTWHPTNHEILRPSFTTKACVIASIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPIENV 251
BLAST of trimeric intracellular cation channel type b vs. nr
Match: gi|1036775000|ref|XP_016951972.1| (PREDICTED: trimeric intracellular cation channel type B-B [Drosophila biarmipes] >gi|1036775018|ref|XP_016951973.1| PREDICTED: trimeric intracellular cation channel type B-B [Drosophila biarmipes] >gi|1036775036|ref|XP_016951974.1| PREDICTED: trimeric intracellular cation channel type B-B [Drosophila biarmipes] >gi|1036775054|ref|XP_016951975.1| PREDICTED: trimeric intracellular cation channel type B-B [Drosophila biarmipes]) HSP 1 Score: 139.813 bits (351), Expect = 1.860e-36 Identity = 85/268 (31.72%), Postives = 141/268 (52.61%), Query Frame = 0 Query: 15 LDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRN---HGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYALVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSKWFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLGALLML------QFGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDS---------VWNSF--------VEEADKKD 256 LD N Q + +++P+FD+ H LL +++R++ G N KHP A W + +L FAG ++AN LLG+PIL K+ LL T ++ +VF+ P D+ + + PV A+KE+YRAKK+Y G+ +K YP++ W + +I LKGNG+ F I R + P + E +PS TK +L +++ + + ++Y +V + K+S I+ DPF P+++ +W+S ++AD KD Sbjct: 7 LDVAN-QVIKLKMFPFFDIAHSLLAALAVREDLGANAQAFSRKHPLACWLSTMLVIFAGGMVANGLLGEPILAPLKNTGQLLVGTAVWYVVFYTPFDIGYKVAKFLPVKIVASAMKEIYRAKKVYDGVGHAAKLYPNA-WIIMIIIGTLKGNGAGFTKLIERLIRGAWTP-TAMEFMQPSFYTKASLLASIIFVLDKKTDWISAPHALVYFGIVIFLVYFKLSSILLGIHDPFLPLENLSCAIFFGGIWDSLAKILGRGQAKDADSKD 271 The following BLAST results are available for this feature:
BLAST of trimeric intracellular cation channel type b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of trimeric intracellular cation channel type b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 19
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BLAST of trimeric intracellular cation channel type b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1679_size31325:842..2026+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1679_size31325-snap-gene-0.6 ID=maker-scaffold1679_size31325-snap-gene-0.6|Name=trimeric intracellular cation channel type b|organism=Tigriopus kingsejongensis|type=gene|length=1185bp|location=Sequence derived from alignment at scaffold1679_size31325:842..2026+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'trimeric intracellular cation channel type b' has the following synonyms
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