dna-binding protein smubp-2, maker-scaffold1716_size30199-snap-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000009428 (supercontig:LSalAtl2s:LSalAtl2s600:488026:492190:-1 gene:EMLSAG00000009428 transcript:EMLSAT00000009428 description:"maker-LSalAtl2s600-snap-gene-3.46") HSP 1 Score: 720.309 bits (1858), Expect = 0.000e+0 Identity = 449/1036 (43.34%), Postives = 613/1036 (59.17%), Query Frame = 0 Query: 9 VDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSEARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSA-SPDGPLKHLPENH-----FDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQA-HESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPEL-ATPDE--ISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAA-KFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVST-DKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVRP-EGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFM---SDSDQSSHDFSSDLNSHDRMVVHEI--AETLDLIHESVGEGKKRHILIRKK---VTEVKETP---------------------VQKAAFDDGML---------------QCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 ++ F+ +QE L ERE E+ ++ S EH + K LEKRG AL L+ RTGLYGR ILS S P LP+HS+++GDIV L + ++ SGVV +++ I VS + + D + + + K+ANDVTYKRL AL+R+ LE+ L GI + ++ ++HGPPGTGKTTT+VEI++QAV+SG +VLC APSNVAVDNLL+RLVKNK++ VR+GHPAR++ DLQK+SLDA ID SDQTQ+VRD+R +ID +K+R+ EIKELR+E +RE A+KEI + +V+L TL S+ S GPLK L + FD+ VIDECSQALEL+CWI LP A KAIL+GDH QLPPT+M ++A +G TLMER++K + VR+L++QYRMN +IM W+S+ Y+ +L+A + V +L DL ++ E TS+P++LIDT G M E A DE SK NEGE +LV HV +LI +G+ ++IAVITPYNLQVELIR Q + K P EVRSVDGFQG+EKEAV+LSLVRSN ++GFLAESRRLNVAVTRA+RH+AV+C+SET+S D FLK F++YL +HGE+R+A++Y + +LVRP E + I SK T K KK + K++ D+ + K E K+ L E DP + +++ +++F+ S D+S ++FSS+LNS++R +VH + AE L HES+GEGK R I+I+ K V E+ P + +A D+ CS C +P N LH +RC+ A NP P +VK K + D D+L F+K+D +CN CK K+ATLG+NC FCR RFCL H + EIHGCG AR +AR+QI R G+I+ GSG P D +R+QL +L+K +N ++RK K+ E K Sbjct: 1 LEEFVERQEICLKTEREEEI-RAGSNFEHGNFKALEKRGSALVNLIFEGSRTGLYGRRILSF-GSKRXPPLLPSHSMSNGDIVKLISKSKSGEESPSGVVTFANTTTISVSLDEESNFDIEDXKETVTMVKVANDVTYKRLQGALARLSQSGSRSRLESILFGIGDM----------------------------------------KIGIIHGPPGTGKTTTVVEIVSQAVKSGCKVLCVAPSNVAVDNLLERLVKNKLKCVRIGHPARISADLQKYSLDALIDSSDQTQIVRDVRKDIDLALKNARKNRN---------EIKELRRECREREGKAIKEIFSRAQVILTTLVSSDSVSGPLKVLKNKNDTSYPFDLVVIDECSQALELSCWISLPQAPKAILSGDHCQLPPTVMSQEAISKGFANTLMERLVKSHPVA-VRVLEIQYRMNNSIMNWSSKEFYESKLKAGSDEVGKRVLIDLPGIENNEETSVPIILIDTAGXXMHEFVADGDEENGSKGNEGEASLVVSHVRKLIDAGMNPSDIAVITPYNLQVELIRSQFSGDKRP--EVRSVDGFQGQEKEAVILSLVRSNEKGNVGFLAESRRLNVAVTRAKRHLAVVCDSETLSKGDPFLKRFVEYLGEHGEIRSAMEYSVQ----DLVRPAEKIPKITSASISSKKSSNTSKEKKSKVKSSKKQDFHDSTSKKKEPLSYKS-----------LEEGSXEDP---RCNEYRNIVKEFLKSKSGVDKSLYNFSSELNSYERALVHSLIDAEFPSLSHESIGEGKDRKIVIKYKKQIVEEIVNPPNKGRNTVGDVKTSDKKSKKGNIFEALPDEATCTKSKAEEAQKSSDKKHCSKCSKLIPLNNFHLHDLRCQPKSIAASNPKP-------SVKKNK---------LPEGDDFDELCNAFAKMDAICNALNCKTKVATLGMNCPFCRKRFCLSHGMAEIHGCGDEARKSARKQIVREGKIYPGSGKPDRSMDKVKRSQLSKKLNKTINEKSEDRKTKKKESK 948
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000005015 (supercontig:LSalAtl2s:LSalAtl2s260:591600:598646:1 gene:EMLSAG00000005015 transcript:EMLSAT00000005015 description:"maker-LSalAtl2s260-augustus-gene-6.11") HSP 1 Score: 218.779 bits (556), Expect = 9.755e-59 Identity = 189/580 (32.59%), Postives = 284/580 (48.97%), Query Frame = 0 Query: 88 GDIVSLANAKENSSHQESGVVINVSSS---AIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSEARH--QVLENCLLG------ISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRS-GNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRER----SAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPF-AKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQ-DLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQ----VELIRLQ--LAAK-FPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHG 642 GD ++L +N + + G VI + + + + +S+L+A L + I + ++ R+ AL + E + N LLG I P +PN+ L+ SQ AV AL Q+ L+++ GPPGTGKT T I+ Q V+ G VL CAPSN A D L +++ + ++ VRL R D S A + L +Q + IDS+F K+++ L+ E EL K R R S+ + ILK +V+ T +A D + H+ F +IDE QA E C +P+ A + IL GDH QL P +MC++A+ GL+ +L ER++ G R L+VQYRM+ + ++ S Y+G LQ S L D W + P+ T+G + E+A S N E A V IK+G+K +I +ITPY Q V+ ++ Q L K + E+ SVD FQGREK+ +++S VRSN ++ IGFLA+ RRLNVA+TRA+ V V+ N + +S L + + HG Sbjct: 373 GDELNLRYNGDNHTWKSVGHVIKIPDNFGDEVGIELKSNLEA-PTYLTHKFAIDFVWKSTSFDRMQKALKKFTDEGLSVSSYIYNRLLGKQVEDVIFRCQLPRHFSAPNLPD-----------LNRSQVYAVRRAL-QRPLSLIQGPPGTGKTVTSATIVYQLVKQRGGPVLVCAPSNTAXDQLTEKIHRTGLKCVRLCAKTREAID----SPVAHLALHNQIR-------NIDSDFRKLQQ---------LKDETGELSKADEIRYRMLRKSSERNILKVADVICCTCIAAG-DLRINHM---RFASILIDESMQATEPECMVPVVLGANQLILVGDHCQLGPVVMCKKASLGGLSQSLFERLV-MLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVSGEDRKLNIDFPWPVPDK----PMFFYVTSGQE--EIAG-SGTSYLNRTEAANVEKFTTRFIKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLNTKLYQECEIASVDAFQGREKDIIIISCVRSNDHQGIGFLADPRRLNVALTRAKYAVIVVGNPKVLSKQPLWNNLLHHYKDHG 906
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000000606 (supercontig:LSalAtl2s:LSalAtl2s109:446994:450007:1 gene:EMLSAG00000000606 transcript:EMLSAT00000000606 description:"maker-LSalAtl2s109-augustus-gene-4.29") HSP 1 Score: 153.295 bits (386), Expect = 1.772e-40 Identity = 104/318 (32.70%), Postives = 165/318 (51.89%), Query Frame = 0 Query: 327 LRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDM-------PELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDY 637 ++EI +L K + + ++ K++ + + T+ S S D K+ +FD+ IDE + + + A + IL GDH QLPP +A EG + ME++ K + V L +QYR N+ I W+S +Y +L+ +V LQDL Q +E + P + IDT G E T + S N E LV + V + I+ G+ I+V+ + + +R + + +VD FQG+EKE +++S VRSNP +IGFL E+RR+NV+VTRARR V ++ +SET+ D LK +D+ Sbjct: 82 FKKEISKLFK----KHKILIERAKKESSIFVTTIASTSLDTYKKY----NFDLVCIDEAGFVSQGNSLLHILRAPRIILCGDHCQLPPITFNPDSALEGYEISAMEKLTKLLPNC-VSFLSIQYRSNQIISEWSSRYIYYNKLRTSSTVANITLQDLIPHQNSE-LNRPFVFIDTKGQGYHEEQDEGSEFMTDADKSIVNLNEAFLVEIIVNKYIELGVSPKVISVLRSLIWKSDHLR--------DISIYTVDSFQGKEKEMIIISFVRSNPYGEIGFLRETRRINVSVTRARRCVIIVGDSETLCHDPALKDLVDF 381
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000003665 (supercontig:LSalAtl2s:LSalAtl2s19:264402:269259:-1 gene:EMLSAG00000003665 transcript:EMLSAT00000003665 description:"maker-LSalAtl2s19-snap-gene-2.18") HSP 1 Score: 149.828 bits (377), Expect = 8.805e-37 Identity = 138/482 (28.63%), Postives = 231/482 (47.93%), Query Frame = 0 Query: 217 LAVVHGPPGTGKTTTIVEIITQAVRSGN--------RVLCCAPSNVAVDNLLDRL--VKNKVRVVRLGHPARVNKDLQKFSLDAQID---------LSDQTQLVRDI---RGEIDSNFSKIKKSRSKGEQSGLRREIKE----LRK------ELHDRERSAMKEILKQTEV----VLGTLTSASPDGPL-------KHLPENHFDITVIDECSQALELACWIPLPFA-KKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSS----IVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEEL-----IKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLE-------------VRSVDGFQGREKEAVVLSLVRSNPNKD------IGFLAESRRLNVAVTRARRHVAVICNSETVS 626 L+++ GPPGTGK+T I ++ Q + N ++L APSN A+D+L+ +L + +++++R+G ++K +++ L ++ L + R+I + EI+ +I+K+ S + + L+R++K+ L++ L + E+ ++ + +T + ++ T S+S +G + K+ P +F I ++DE SQ +E IPL K ++ GD QLP T+ +A +L R+ K +S + LK+QYRM+ I RW + Y GEL + W + PL L D + M E T +E S N E V + E+ I G K I VIT Y+ Q + + L+L G+E V +VDGFQG E + +VLS VRS+ D IGF ES RLNVA+TRA+ + ++ + +T+S Sbjct: 987 LSLIQGPPGTGKSTVISSLVIQIMSRFNIQGEKKPPKILLVAPSNSAIDSLVKKLRRLAPEMKLIRVGQLNSMDKQVKEIELTRIVNNKLNEMESQLGTNESIQREITHRQEEINHIGHEIEKAISSSKINLLQRKLKDETFKLKRAKKSIQTLSNYEKDKKRQEITRTTLDDADIVATTLSSSLNGQMXSHFLRDKYKPGRNFSICIVDEASQCVEPEGLIPLKLGFSKLVMVGDPEQLPATVSSIKAKDLSYGQSLFNRLFKSSRNSDTNTSIHCLKIQYRMHGDIARWPNHYFYGGELT----------NGVSWTSRNSDL-FPLKLFDLSWTKMEE--TNNEKSIFNTKEAKFVATLISEIKKEPHIIPGNKT--IGVITFYSQQRKHLSLELQNL--GIETSDGKRISKSAVTVCTVDGFQGSEXDIIVLSCVRSSKQNDIHTSSSIGFTGESERLNVALTRAKYALYIVGDFQTLS 1451
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000004276 (supercontig:LSalAtl2s:LSalAtl2s224:316115:320975:1 gene:EMLSAG00000004276 transcript:EMLSAT00000004276 description:"maker-LSalAtl2s224-augustus-gene-3.17") HSP 1 Score: 124.02 bits (310), Expect = 6.823e-29 Identity = 130/502 (25.90%), Postives = 221/502 (44.02%), Query Frame = 0 Query: 184 PNI---RHEDGSIRFVNDRLDDSQRSAVEFALLQKEL----AVVHGPPGTGKTTTIVEIITQA--VRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAK----KAILAGDHLQLPPTIMCEQAAKEGLNFTLMERV--------------IKQFGSS----IVRMLKVQYRMNEAIMRWASEALYQGEL----QAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIK-SGLKAAEIAVITPYNLQVELIRLQL-AAKFPGLEVRSVDGFQGREKEAVVLSLVRSN----PNKD---IGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKH 641 PN+ + + I + L+ Q+ AV ++L+ E ++ GPPGTGKT T++E I Q +R +R+L APSN A D LL+ L +K V+ G R+ +KF +I + + IK E+ M+ +LK + +V+ T TS+S +K F +DE LE PL F + +LAGD QL P + A + GL ++L+ER+ + +F S ++ L YR + AI++ S+ Y EL ++S +G+ N P++ D + D S N E + L++ +L + ++ +ITPY QV+ I+ + + P +V SV+ FQG+E+ ++LS VRS+ P +GF+ + +R NVA+TRA+ + ++ N + + D K F++Y +++ Sbjct: 658 PNVVPFKKGNSCIEWTQPYLNPEQKQAVR-SILKGEARPIPYIIFGPPGTGKTVTLLETILQIFILRKDSRILVTAPSNAACDLLLNLLAASKK--VKPGDVVRILGARRKF---------------ENIPEYLIPYYFSIK------------------------NEKETMEGVLK-SRIVVTTCTSSSFFSRIKDF--RRFTHVFVDEAGFVLEPDILTPLNFVDIEEGQIVLAGDEKQLSPVLSSSLAKEFGLAYSLIERLCSFNPLYAPDPNKFVTRFSDSYDSLLITKLVRNYRNHPAILKLPSKLFYHDELIPSVSNNQSFKGY--------DILLNEDFPIVF---HALDGEQRRDEDSPSWYNYQEAFQIVLYLRKLYSIPRISEDQVGIITPYRKQVDCIKSYIQSFDLPIPKVGSVEEFQGQERLIILLSTVRSSXLDTPASTKHVLGFVGDEKRFNVALTRAKDLLIIVGNPKVLIQDSVWKEFIEYCDRN 1103
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000010050 (supercontig:LSalAtl2s:LSalAtl2s662:147778:155854:1 gene:EMLSAG00000010050 transcript:EMLSAT00000010050 description:"maker-LSalAtl2s662-augustus-gene-1.18") HSP 1 Score: 119.398 bits (298), Expect = 6.682e-28 Identity = 130/503 (25.84%), Postives = 208/503 (41.35%), Query Frame = 0 Query: 178 PLQSVSPNIRHEDGSIRFVNDRL--DDSQRSAVEFALLQKEL---AVVHGPPGTGKTTTIVEIITQAVRS--GNRVLCCAPSNVAVDNLLDRLVKN-----KVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPL-PFAKKA--ILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIK-----------QFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTS--IPLLLIDTTGCDMPELATPDEI-SKANEGEVALVCLHVEELIK-SGLKAAEIAVITPYNLQVELIRLQLAAKF---PGLEVRSVDGFQGREKEAVVLSLVRSNPN-KDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRT 646 P +S N+ RF N L ++ Q A+E L ++ GPPGTGK++T+ E I Q R+L CAPSN A D + ++ + + + VV H + + F QI S+ Q+V I D +F + S V+G + S H+ DE + E C + + P A +L+GDH QL P ++ + GL +LMER++ + V L YR + +++ +SE Y GEL A L L +A EN P + ID G ++ P S N EV +V +L+ + I +I+PY Q +Q+ + P +E S + FQGREK+ +++S RS+ N K +GFL +R NVA+TRA+ V+ +S+ + D + ++Y++++G T Sbjct: 197 PSKSKKINVGRRQKIYRFFNKNLGCNEKQTQAIEHILGFSSYPFPYIIFGPPGTGKSSTVAEAIKQVHHDPKKTRILVCAPSNTAXDVVTEKXLDDIXPCSVLHVVAARHKEKYDSKTGPFKESLQIGGSEW-QIVNWIVCNKDKSFVILSTS-------------------------------------VMGYVVSKMVGKLFTHV--------FYDEAGFSSEPECLLAIKPHLNHALIVLSGDHYQLGPVVLSQNTF--GLTISLMERLMTCDPYYMRGSGHTYNPKYVTKLVDNYRSDFRLLKLSSEIFYDGELVARS------LPCLSVTRARENMGYRFPFVFIDVRG----DMVRPKNCKSFFNNTEVEIVQKIANKLLAMDDISQKSIGLISPYRPQY----MQMGSIMHYCPRMEYGSPELFQGREKDIIIISTARSSNNSKTLGFLTNFKRFNVAITRAKYLCIVVGDSKLLEMDPVWSSLVNYIKENGGFIT 637
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000003094 (supercontig:LSalAtl2s:LSalAtl2s173:343286:346696:-1 gene:EMLSAG00000003094 transcript:EMLSAT00000003094 description:"maker-LSalAtl2s173-snap-gene-3.31") HSP 1 Score: 118.242 bits (295), Expect = 3.324e-27 Identity = 131/461 (28.42%), Postives = 199/461 (43.17%), Query Frame = 0 Query: 200 LDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLN---FTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQ-AHESVRGHLLQ-------DLDWVQATENTSI--PLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIK--SGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPN-KDIG-----FLAESRRLNVAVTRARRHVAVICNSETVST----DKFLKAFL 635 L+ Q+ A+ L+ K+ + G PGTGKTT IV +I LL +K V + + A N L+ S D D F I+ R L + E + E D+ +V+GT T + P + FD ++DE QA L+ PL AK IL GD QL P + QA G++ F+LMER + V L +QYRMN I A+ Y+GEL+ + V ++L+ D WV++ + S+ ++ +DT + I+ +E E+ +E+L+ G +I VI PY QV L+R KF G++V +VD FQG++K+ + S R + N KD L + RRLNVA+TRA+ + ++ N +T+ +K L FL Sbjct: 620 LNRVQQKAIFKTLMAKDNICLKGMPGTGKTTLIVALI---------------------RLLAMTMKKSVLLTSYTNTAXDNVXLKLLSFD-------------------DVGF--IRLGRRSRINPRLYNHMFESQTEFEDK-------------LVVGT-TCLGLNHP--AITSRRFDYCILDEAGQASLLSSVGPLFHAKVFILVGDPEQLRPVVRSVQARSLGMSESIFSLMER------ENNVIPLTLQYRMNSRITECANFLTYKGELECGNTQVASNILKEDHSHDSDPSWVKSALDPSLHQSIVFLDTGSRGVESRHGSYGITNTHECEI------IEQLLNRIKGGNDYDIGVIAPYQAQVSLLR----KKFNGIDVNTVDQFQGKDKDIIFYSCTRCSSNIKDEAKSSESILNDERRLNVAITRAKMKIILVGNRDTLVNFKPFNKLLTLFL 1006
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000012979 (supercontig:LSalAtl2s:LSalAtl2s98:187656:193333:1 gene:EMLSAG00000012979 transcript:EMLSAT00000012979 description:"maker-LSalAtl2s98-augustus-gene-2.15") HSP 1 Score: 115.161 bits (287), Expect = 3.969e-26 Identity = 127/467 (27.19%), Postives = 205/467 (43.90%), Query Frame = 0 Query: 219 VVHGPPGTGKTTTIVEIITQAVRS-GNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKEL------HDRE-RSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAK---KAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIV--RMLKVQ-YRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKA------AEIAVITPYNLQVELIRLQLAAK-FPGLEVRSVDGFQGREKEAVVLSLVRS---------NPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVST----DKFLKAFLDYLEKHGEVRTALQYQ 651 ++ GP GTGKT T+ + + ++ NR+L C SN A D + + HP + + RD E ++ S IK R E ++ + K H R R+ E + +V+ TL+++ L L + HF +IDE +QA+E + L A + +LAGDH+QL P + + A ++ N +L+ER+ + S ++L ++ YR + AI+ + SE Y+ +L A H L W PL L G D+ +L + S N EV V V +L + K+ I ++TPY QV+ IR +L + G+ V V QG++ A+ LS VR+ +P D GFL+ ++ LN A+TRA+ VAV+ + + + K + F++ K G L YQ Sbjct: 698 LIIGPYGTGKTFTLGQSLKMLLKDRSNRILVCTHSNSAAD----------LYIREYLHP-----------------YVTEMKAARDNVEETET--SPIKVLRVYYENRWVKTVHDTVLKYCLVTTTEHSRNFRNPTFEEVVDCHIVVXTLSTSKSLTGLG-LTKGHFTHVLIDEAAQAMECEAIMALALASTQTRVVLAGDHMQLSPEVFSKLALEKKFNKSLLERLYDFYPKSNFPCKILLIENYRSHRAIIEYTSELFYEQKLLASGKQTRHDL----WY--------PLTLFTARGEDVQDL---NSTSFYNNAEVYEVVERVTQLQLTWPKSWGRRDETSIGIVTPYYDQVQRIRSELRKRNLFGVSVERVLNVQGKQFRAIFLSTVRTRKTCVMSQEDPEVDFGFLSNAKLLNTAITRAQSLVAVVGDPVALCSIGKCRKMWEKFMEICNKGGSF-FGLTYQ 1118
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Match: EMLSAG00000009713 (supercontig:LSalAtl2s:LSalAtl2s627:13248:23312:1 gene:EMLSAG00000009713 transcript:EMLSAT00000009713 description:"maker-LSalAtl2s627-augustus-gene-0.35") HSP 1 Score: 74.3294 bits (181), Expect = 1.291e-13 Identity = 73/269 (27.14%), Postives = 128/269 (47.58%), Query Frame = 0 Query: 377 FDITVIDECSQALELACWIPLPFA---------KKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRM------LKVQYRMNEAI---MRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAK-----FPGL--EVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVIC 620 +D +++E +Q LE+ +IPL K+ I+ GDH QLPP I + AA + F+ ME+ + + +VR+ L Q R ++ W ++L G L H+L++ +++ A S LI+ + P N E V + G A +I+++T YN Q LIR + ++ G+ ++ +VD +QG++ + ++LSLVR+ K++G L + RRL VA++RA+ + V Sbjct: 1244 YDNILMEESAQILEIETFIPLLLQNPQDNHNRLKRWIMIGDHHQLPPVI--KNAAFQ--KFSNMEQSL---FTRLVRLGVPTIELDAQGRARPSLCSLYNWRYKSL--GNLH-------HVLENNEYLNANGGFSFDYQLINVADFQGVGESQPSPFFYQNLAEAEYVVATFMYMRLLGYPAGKISILTTYNGQKHLIRDVVNSRCAKNSMVGVPYKITTVDKYQGQQNDFILLSLVRT---KNVGHLRDVRRLIVAMSRAKLGLYVFA 1493
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|2498040|sp|Q60560.1|SMBP2_MESAU (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Immunoglobulin mu-binding protein 2; AltName: Full=Insulin II gene enhancer-binding protein; AltName: Full=RIPE3B-binding complex 3B2 p110 subunit; Short=RIP-1) HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0 Identity = 468/1016 (46.06%), Postives = 623/1016 (61.32%), Query Frame = 0 Query: 8 SVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPN----LPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLD-AIKADLDDRLNITKLANDVTYKRLSSALSRIKS--EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLV-----------RPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKK-------VTEVKETPVQKAAFDD--------GMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAV---AVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 +V+ F+ QQ L +ER+AE+ + RS EH KEL+ RG+ L +L ++S TGLYG+ LV+ P + LP++S TSGDIV L +A E SS +GV+ ++ ++ V+F+ S D + D ++ + KLANDVTYKRL AL +K L + LLG S+ SP + + P F N LD SQ+ AV FAL QKE+A++HGPPGTGKTTT+VEII QAV+ G ++LCCAPSNVAVDNL++RL K R++RLGHPAR+ + Q+ SLDA + SD Q+V DIR +ID F K KK++ K E+S R EIK LRKEL +RE +A+ + L +VVL T T AS DGPLK LPENHFD+ V+DEC+QALE +CWIPL A K ILAGDH QLPPT + +AA GL+ +LMER++++ G+ VRML VQYRM++AI RWASEA+Y G+L AH SV GHLL+DL V TE TS+PLLLIDT GC + EL D SK N GEV LV LH++ L+ +G+ A +IAVI PYNLQV+L+R L+ K P LE++SVDGFQGREKEAV+L+ VRSN ++GFLAE RR+NVAVTRARRHVAVIC+S TV+ FLK +DY +HGEVRTA +Y ++I N +P G +I+ KP E + ++ + A + ++ + S+ H + G + + E F+A I+ F++ S +S +F + L+SHDR++VH+IAE L H+S GEGK RHI + +K V +P A + G CS L KA LH R +R + P + + + KKKK ++ G A E+D D L+ K D C+ KC A TLG C C R+CL H LPEIHGCG AR+ ARQ ISR G +++GSG DP +RAQL RLDKKL L +R +K+ EK+ Sbjct: 5 TVESFVAQQLELLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSSQCTGLYGQ---RLVTFEPRKLGPVVVLPSNSFTSGDIVGLYDANE-SSQLATGVLTRITQKSVTVAFDESHDFQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSSPSPTTE-IPP--------FTFYNTALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHSHAPKPRGPVTSIR-----KPTNEQENGQEARAAAGQGRRKPNERPPGSQVHSQPSSGARGCDRTGAID----------RTEHFRAMIEGFVA-SKESQLEFPASLSSHDRLLVHQIAEEHGLRHDSTGEGKARHITVSRKSPAGSGGVAPQLPSPPSPAQAEPEPLSQQPLGQPHCSTQLDL--KA---LHLQRLQRQQGSQAQPAKAQPGVGLHPQKTQQKKKKKETKGPALPCEEDFDALVSAVIKADNTCSFAKCTASTTTLGQFCMHCSRRYCLSHHLPEIHGCGEKARAHARQMISREGVLYAGSGTRDRALDPAKRAQLQRRLDKKLGELSSQRTSKRKEKE 986
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|317373494|sp|P38935.3|SMBP2_HUMAN (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Glial factor 1; Short=GF-1; AltName: Full=Immunoglobulin mu-binding protein 2) HSP 1 Score: 800.816 bits (2067), Expect = 0.000e+0 Identity = 455/1014 (44.87%), Postives = 621/1014 (61.24%), Query Frame = 0 Query: 8 SVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSL-VSSHPNLPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLD-AIKADLDDRLNITKLANDVTYKRLSSALSRIKS--EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNL------------VRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKKVTEVKE-----------TPVQKAAFDDGMLQCSGCLARLPKAN--MELHKVRCRRSHAAVPNPPPVEVAKAVAVK-AKKKKAKSAGKAADD---EQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKKT 988 +V+ F+ +Q L +ER+AE+ + RS E++ KEL+ RG+ L +L ++S RTGLYGR +++ + + LP++S TSGDIV L +A S +G++ V+ ++ V+F+ S D + D ++ + KLANDVTY+RL AL +K L L G S SP + P + F N LD SQ+ AV FAL QKELA++HGPPGTGKTTT+VEII QAV+ G +VLCCAPSN+AVDNL++RL K R++RLGHPAR+ + +Q+ SLDA + SD Q+V DIR +ID F K KK++ K E+S R EIK LRKEL +RE +AM E L VVL T T AS DGPLK LPE++FD+ VIDEC+QALE +CWIPL A+K ILAGDH QLPPT + +AA GL+ +LMER+ +++G+ +VR L VQYRM++AIMRWAS+ +Y G+L AH SV HLL+DL V ATE T +PLLL+DT GC + EL DE SK N GEV LV LH++ L+ +G+ A +IAV++PYNLQV+L+R L + P LE++SVDGFQGREKEAV+LS VRSN ++GFLAE RR+NVAVTRARRHVAVIC+S TV+ FLK ++Y +HGEVRTA +Y ++I N +P+G + R +Q+ + A ++ + P KS +Q + G + ++ +D F+A I +FM+ S + +F LNSHDR+ VH+IAE L H+S GEGK+R I + K+ + P+Q + R P LH R +R +A P E + K +KKK K+ G A D E+D + L+ K D C KC A + TLG C+ C R+CL H LPEIHGCG AR+ ARQ+ISR G +++GSG + DP +RAQL RLDKKL+ L ++R +++ E+ T Sbjct: 5 AVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSP-ASEIHP--------LTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSSHAATKPQGP--------ATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGVESQDGVD-------HFRAMIVEFMA-SKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQASGQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKNGSLDPAKRAQLQRRLDKKLSELSNQRTSRRKERGT 993
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|730752|sp|P40694.1|SMBP2_MOUSE (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Cardiac transcription factor 1; Short=CATF1; AltName: Full=Immunoglobulin mu-binding protein 2) HSP 1 Score: 790.03 bits (2039), Expect = 0.000e+0 Identity = 453/1005 (45.07%), Postives = 623/1005 (61.99%), Query Frame = 0 Query: 8 SVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPN----LPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLD-AIKADLDDRLNITKLANDVTYKRLSSALSRIKS--EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKK---------------VTEVKETPVQKAAFDDGMLQCSGCLARLPKANMELHKVRCRRS---HAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 +V+ F+ QQ + L +ER+AE+ + RS EH +EL+ RG+ L +L ++S RTGLYG+ LV+ P LP++S TSGDIV L + ENS +GV+ ++ ++ V+F+ S D + D ++ + KLANDVTYKRL AL +K L + LLG ST SP ++ + P + F N LD SQ+ AV FAL QKELA++HGPPGTGKTTT+VEII QAV+ G +VLCCAPSN+AVDNL++RL K R++RLGHPAR+ + +Q SLDA + SD Q+V DIR +ID F K KK++ K E+ R EIK LRKEL +RE +A+ + L +VVL T T AS DGPLK LPE++FD+ V+DEC+QALE +CWIPL A K ILAGDH QLPPT + +AA GL+ +LMER+ ++ G+ +VRML VQYRM++AIM WASEA+Y G+ +H SV GHLL+DL V TE T +PLLLIDT GC + EL D SK N GEV LV LH++ L+ +G++A +IAVI PYNLQV+L+R L+ K P LE++SVDGFQGREKEAV+L+ VRSN ++GFLAE RR+NVAVTRARRHVAVIC+S TV+ FL+ +DY +HGEVRTA +Y ++I N EG + + V KP+ + +K +S + ++++ P K + D + E F+ATI++F++ S +S +F + L+SHDR+ VH++AE L H+S GEGK RHI + ++ + + P +A ++Q + C +L + L +++ ++S A P + + K KKK+ K A E+D D L+ K D C+ KC TLG C C R+ L H LPEIHGCG AR+ ARQ+ISR G +++GSG DP +RAQL RLDKKL L +R +++ EK+ Sbjct: 5 TVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYGQ---RLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNENS-QLATGVLTRITQKSVTVAFDESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTPSPAME-IPP--------LSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVRTAFEYLDDIVPENYTH-EGSQGHSR---VPKPKCPSTSIRKPASDQESGQETRAAPRHGRRKPSEKPPGSHVQSQHSSSANGSDRTGGPDRTEHFRATIEEFVA-SKESQLEFPTSLSSHDRLRVHQLAEEFGLRHDSTGEGKARHITVSRRSPASSGSVAPQPSSPPSPAQAEPEPRAEEPVTVVQ-AHCPVQLDLKALHLERLQRQQSSQAQTAKGQPGGDSRPQKASQKKKKKEPKGPVMALPCEEDFDALVSAVVKADNTCSFSKCSVSTTTLGQFCMHCSHRYYLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTKDRALDPAKRAQLQRRLDKKLGELSSQRTSRKKEKE 990
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|81917357|sp|Q9EQN5.1|SMBP2_RAT (RecName: Full=DNA-binding protein SMUBP-2; AltName: Full=ATP-dependent helicase IGHMBP2; AltName: Full=Antifreeze enhancer-binding protein ortholog; Short=AEP) HSP 1 Score: 780.785 bits (2015), Expect = 0.000e+0 Identity = 457/1015 (45.02%), Postives = 622/1015 (61.28%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPN----LPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLD-AIKADLDDRLNITKLANDVTYKRLSSALSRIKS--EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKK-------SKDTPTVKSETHHVKAQ--AEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKKVTEVKETPVQKAAFDDGMLQCSGCLARLPKANME----------------LHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGK--AADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 ++V+ F+ QQ + L +ER+AE+ + RS EH KEL+ RG+ L +L ++ RTGLYG+ LV+ P LP++S TSGDIV L + E SS +GV+ ++ ++ V+F+ S D + D ++ + KLANDVTYKRL AL +K L + LLG ST SP + + P + F N LD SQ+ AV FAL QKE+A++HGPPGTGKTTT+VEII QAV+ G +VLCCAPSN+AVDNL++RL K +++RLGHPAR+ + +Q+ SLDA + SD Q+V DIR +ID F K KK++ K E+S R EIK LRKEL +RE +A+ + L +VVL T T AS DGPLK LPE++FD+ V+DEC+QALE +CWIPL A K ILAGDH QLPPT + +AA GL+ +LMER+ ++ G+++VRML VQYRM++AI RWASEA+Y G+L AH SV GHLL+DL V TE TS+PLLLIDT GC + EL D SK N GEV LV LH++ L+ +G++A +IAVI PYNLQV+L+R L+ K P LE++SVDGFQGREKEAV+L+ VRSN ++GFLAE RR+NVAVTRARRHVAVIC+S TV+ FLK +DY +HGEVRTA +Y ++I N E + KP+ T +K +S + ++ S+ P+ K V+ Q ++ G D +++ E F+A I++F++ S ++ +F + L+SHDR+ VH++AE L H+S GEGK RH +T + +P + P+ +E LH R +R ++ KKKK + G A E+D D L+ K D C+ KC A TLG C C R+CL H LPEIHGCG AR+ ARQ+ISR G +++GSG DP +RAQL +LDKKL L +R +K+ EK+ Sbjct: 4 YTVESFVAQQLQLLELERDAEVEERRSWQEHSSLKELQSRGVCLLKLQVSGQRTGLYGQ---RLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNE-SSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENTYRLLKLANDVTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTPSPATE-IPP--------LTFYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTH----EGSRSHSCAPKPKCPTTSVRKPASAQESRQEARAATGHSRRKPSEKPLGSQVQPQHSSKANGSDRTGGTDRT---------EHFRAMIEEFVA-SKEAQLEFPTSLSSHDRLRVHQLAEEFGLKHDSTGEGKARH------ITVSRRSPAGSGSATPQPPSPPSPAQAEPEPQVEQPVGQPHGSTQLDLKALHLERLQRQQGCQAQSQLGGGSRPQKAPQKKKKKEPKGPAMALPSEEDFDALVSAVVKADNTCSFTKCSASTTTLGQFCMHCSRRYCLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTKDRALDPAKRAQLQRKLDKKLGELSSQRTSKKKEKE 985
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|74676175|sp|O94247.1|HCS1_SCHPO (RecName: Full=DNA polymerase alpha-associated DNA helicase A) HSP 1 Score: 386.726 bits (992), Expect = 9.061e-121 Identity = 241/656 (36.74%), Postives = 368/656 (56.10%), Query Frame = 0 Query: 9 VDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPN---LPAHSITSGDIVSLANAKENSSHQE--------SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKS---EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPD-----EISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVS-TDKFLKAFLDYLEKHGEV 644 + +F ++ ++ +++E+ ++ ++ L+++GLAL L + +TG G+TI+ P N LPA+S + GD+VS+ ++S + GVV V I V+ +S D I + + RL++ KL N VTY+R+ + K E R+ + L+G + + G I++ N L+ SQ+ AV+F++ KEL+++HGPPGTGKT T+VEII Q V R+L C SN+AVDN++DRL + + +VRLGHPAR+ + SLD D ++R I +ID SKI K+++ E+ + + I+ELRK+ E + I+ ++VV TL A + L FD +IDE SQALE CWIPL K ILAGDH+QL P + ++ ++ ER++K G + L +QYRM+E I ++ S+ Y +L E V+ LL DL+ V+ TE T P+ DT G + + D + SK+N E +V H+ L+++GL+A +IAV+TPYN QV LIR L K +E+ SVD QGREKEA++ SLVRSN +++GFLAE RRLNVA+TR +RH+ VI +S TV +F ++D+LE++ V Sbjct: 15 IQKFGDREIEFVDEAQKSEVDETEKSIKRFPLSVLQRKGLALINLRIGVVKTGFGGKTIIDF-EKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKKKRPNETDISVEGVVTRVHERHISVALKSEED-IPSSVT-RLSVVKLVNRVTYERMRHTMLEFKRSIPEYRNSLF-YTLIGRKKADVSID------QKLIGDIKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVCGASNLAVDNIVDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTGDNGDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGS----RQLKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQSKRPY-----ISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENAIV 651
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|465704|sp|P34243.1|HCS1_YEAST (RecName: Full=DNA polymerase alpha-associated DNA helicase A) HSP 1 Score: 366.311 bits (939), Expect = 8.104e-113 Identity = 251/677 (37.08%), Postives = 374/677 (55.24%), Query Frame = 0 Query: 23 EREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLP---NLPAHSITSGDIVSLANAK---------------ENSSHQE---SGVVINVSSSAIQVSFESSLDAIKADLDD--RLNITKLANDVTYKRLSSALSRIKSEARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSG--NRVLCCAPSNVAVDNLLDRL---VKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASP--------DGPLKHLPENHFDITVIDECSQALELACWIPLPFAK----KAILAGDHLQLPPTIMCE--QAAKEGLNFTLMERVIKQFGS-SIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQAT-----ENTSIPLLLIDTTGCDMPELATPDEI--SKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIR--LQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVS--TDKFLKAFLDYLEKHGEVR 645 ERE ++ + LL L ++L + GLA+ + L + R+GL G+ + L PNL + I GDIV + AK E+S+ ++ SGVV +S + I ++ E S D I +L I K N VTY R+ S + ++ SE + + + + P + PN F+N L+DSQ++A+ FA+ +L ++HGPPGTGKT T++E+I Q + R+L C PSN++VD +L+RL V N + ++R+GHPAR+ ++ SLD LS + +V+DI EID + KK ++ ++ EIK LRK+L RE +K+++ Q+ +V+ TL +S D P L FD +IDE SQA+E CWIPL + K +LAGD+ QLPPTI E + L TL +R+IK F +V+ L VQYRMN+ IM + S ++Y G+L A +V LL DL V AT ++T IPL+ DT G + E A I SK NEGE+A+V H+E L + I VI+PYN QV ++ + K +E+ +VDGFQGREK+ ++LSLVRSN ++GFL E RRLNVA+TR RR + V+ N E + +K+LK++ ++ E++ +VR Sbjct: 16 EREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLYMEL---GPNLAVNDKIQRGDIKVGDIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECSGVVYKMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKL-SEISSPIQDKIIQYLVNERPFI----PNTNSFQNIKSFLNPNLNDSQKTAINFAI-NNDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNL-LLRIGHPARLLDSNKRHSLDI---LSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQL----FDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQRCGNKYLKSWSEWCEENADVR 675
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|2498043|sp|Q57568.1|Y104_METJA (RecName: Full=Uncharacterized ATP-dependent helicase MJ0104) HSP 1 Score: 287.73 bits (735), Expect = 7.489e-84 Identity = 205/597 (34.34%), Postives = 314/597 (52.60%), Query Frame = 0 Query: 85 ITSGDIVSLANAKENSSHQE-SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSEARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVR-SGNRVLCCAPSNVAVDNLLDRLVKNK--VRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEID--------------------SNFSKIKKSRSKGEQSGLRRE--------------IKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDL------DWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDY 637 I+ GD+V ++ KEN + VI V + I V+F+ +D K +R+ + ND+T+KR+ AL + L +LGI PL+ ED + F + L++SQ+ AV+ A+L ++L ++HGPPGTGKT TI E+I Q V+ + ++VL A SN+A DN+L+ L+K ++VVR+GHP R++KDL + SL I+ ++ Q + +R +I S+ +K ++ K G+ +E IK + L + M EIL + +V++ T + A + L FD+ VIDE SQA+E +C IP+ +K I+AGDH QLPPT++ E E L TL ER+IK++ +L++QYRMNE IM + ++ Y +L+A ESV+ L DL D V IP+ I+ G + + +P S N E V V++L+K + VITPY+ QV +R +EV +VDGFQGRE EA+V+S VR+ K+ GFL + RRLNVA+TRA+R + +I N + DK + + Sbjct: 83 ISPGDVVLVS--KENPLQSDLYANVIYVGKNFIDVAFD--VDVPKWVYKERVRVDLYVNDITFKRMKEALREFAR--KRDKLAYIILGIEHPEKPLR--------EDIKLEFYDKNLNESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLATADSNIAADNILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYLIENHEKYQEILALREKIKEIKEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIVSMAEWIIRNKKIKRIINNLDEITEKIMNEILAEADVIVATNSMAGSE----ILKGWEFDVIVIDEGSQAMEPSCLIPIVKGRKLIMAGDHKQLPPTVLSEN---EELKKTLFERLIKKY-PEFSSILEIQYRMNEKIMEFPNKMFYNNKLKADESVKNITLLDLVKEEEIDEVDRDIINEIPVQFINVEGIERKDKESP---SYYNIEEAEKVLEIVKKLVKYKIPT---NVITPYDAQVRYLRRLFEEHNIDIEVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQDKVYNEMIKW 648
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR (RecName: Full=Regulator of nonsense transcripts 1 homolog) HSP 1 Score: 216.853 bits (551), Expect = 1.094e-56 Identity = 162/438 (36.99%), Postives = 230/438 (52.51%), Query Frame = 0 Query: 200 LDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGN-RVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPAR--VNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFA-KKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIK-QFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELI--RLQLAAKFPG-----LEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETV 625 L+ SQ +A++ +L L+++ GPPGTGKT T II + N +VL CAPSNVAVD L +R+ + ++VVRL +R V + +L Q+ ++ + E+D +K GE S + K R A +EIL+ +VV T A L + F +IDE +Q+ E C IPL K+ +L GDH QL P IM ++AAK GLN +L ER++K QF + +R LKVQYRM+ + + S Y+G LQ + L +D+D+ T P++ G E + S N E A V V K+G+K A+I VITPY Q I +Q F +EV SVD FQGREK+ +VLS VRSN N+ IGFL++ RRLNVA+TRA+ + +I N + + Sbjct: 456 LNASQIAAIK-QVLSNPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNTTNK-------ELDG---LVKLKTETGELS------SQDEKRFKQLTRQAEREILQNADVVCCTCVGAGD----PRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLQF--TPIR-LKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPET--PMMFWSNLGN---EEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVL 864
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|88984684|sp|Q9FJR0.2|RENT1_ARATH (RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName: Full=ATP-dependent helicase UPF1) HSP 1 Score: 216.853 bits (551), Expect = 1.490e-56 Identity = 156/461 (33.84%), Postives = 241/461 (52.28%), Query Frame = 0 Query: 200 LDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSG-NRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPAR--VNKDLQKFSLDAQI---DLSDQTQL-----VRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFA-KKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAK-------FPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKH 641 L+ SQ +AV+ ++LQK ++++ GPPGTGKT T I+ + G +VL CAPSNVAVD L +++ ++VVRL +R V+ ++ +L Q+ D S++++L ++D +GE+ S+ K K + +R+ +EI + +V+ T A+ L F +IDE +QA E C IPL K+ +L GDH QL P IMC++AA+ GL +L ER++ G +R L+VQYRM+ A+ + S + Y+G LQ ++ +D+ N P+ G E + S N E A V V +KSG+ ++I VITPY Q I +A + +EV SVD FQGREK+ ++LS VRSN ++ IGFL + RRLNVA+TRAR + ++ N + +S L + ++H Sbjct: 489 LNASQVNAVK-SVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYK----------------------NLKRATEREITQSADVICCTCVGAAD----LRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVT-LGIKPIR-LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNR--PMFFYVQLG---QEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEH 915
BLAST of dna-binding protein smubp-2 vs. SwissProt
Match: gi|17380291|sp|Q92900.2|RENT1_HUMAN (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense mRNA reducing factor 1; Short=NORF1; AltName: Full=Up-frameshift suppressor 1 homolog; Short=hUpf1) HSP 1 Score: 215.312 bits (547), Expect = 3.304e-56 Identity = 159/463 (34.34%), Postives = 244/463 (52.70%), Query Frame = 0 Query: 200 LDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNR-VLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPAR--VNKDLQKFSLDAQIDLSD------QTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPF-AKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQ----AHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELI--RLQLAAK-----FPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKH 641 L+ SQ AV+ +LQ+ L+++ GPPGTGKT T I+ R GN VL CAPSN+AVD L +++ + ++VVRL +R ++ + +L QI D + Q ++D GE+ S + K+ R+ +R+A +E+L +V+ T A L + F +IDE +QA E C +P+ AK+ IL GDH QL P +MC++AAK GL+ +L ER++ G +R L+VQYRM+ A+ + S Y+G LQ A + V+ D W Q + P+ T G + E+A+ S N E A V +L+K+G K +I +ITPY Q + +Q + + +E+ SVD FQGREK+ ++LS VR+N ++ IGFL + RRLNVA+TRAR V ++ N + +S L+Y ++ Sbjct: 482 LNHSQVYAVK-TVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSS--ADEKRYRA--------------------LKRTAERELLMNADVICCTCVGAGD----PRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVV-LGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF--DFQWPQPDK----PMFFYVTQGQE--EIAS-SGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 906
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|919014337|ref|XP_013391625.1| (DNA-binding protein SMUBP-2-like [Lingula anatina]) HSP 1 Score: 880.552 bits (2274), Expect = 0.000e+0 Identity = 486/1047 (46.42%), Postives = 671/1047 (64.09%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAKENSSHQE--SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRI---KSEARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIR---FVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLV-KNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEID-ALNLVRPEGMELTIKDQI---VSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSE-KEDIDPDVVKRE---QFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKK----VTEVKETP-----VQK--------------------------------AAFDDGMLQ--------CSGCLARLPKANMELHKVRCRRSHAAV-PNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEK 986 SV+ F+ + L ER AE+ ++R L E++ KEL++RG+ L +L + S TG+YGR++L++ P LP+H+++ GDIV ++ + + + SG+V V S+I V+FE S D+++ + D + + KLANDVTY+RL AL ++ ++ Q++ N L G + +S P S G ++ F+N LD+SQ++AVEFAL Q+E+AV+HGPPGTGKTTT+VEII QAVR G ++L CAPSN+AVDNL++R+ +K + VRLGHPAR+ +QK++LDA + S++T+LV D+R ++D +K++++R+KGE+ +R E+K LRKELH RE +A++EILK+ +VVLGTLTSA+ DGPLKHL + HFD+ VIDECSQ+LE ACWI L + ILAGDH QLPPTI+ +AAK GL TLMERV+K G ++RML +QYRM+E IM W+SE LY G+L AHESV HLL+DL ++ ENT++PLLLIDT GC++ EL T DE+SK NEGE LV HVE LI SGL A +IAVI PYNLQV+L+RL+L+AK+P LEV+SVDGFQGREKEAVV+SLVRSN ++GFLAE RR+NVA+TRARRH+AVIC+SETVS FLK+ +DY KHGEVR+A QYQNE+D + + PE ++ ++ K +KE + +++ AKK+K++K P SET + LSE K+ D D K E + I FM+D +++ H F S L+S R VVHEIAE L + H S GEG+ RHI+I K+ TE + + VQ+ + D+ +LQ C CL ++P N ELH +RC S+ A P P + K K A E+D D L+ L+ +CN +CK + TLG NCEFC RFCL H +PE+HGCG AA+S AR IS+ G I+ G GVP+ KPDP +RA L +LD KL+ ++R+ K+ +K Sbjct: 4 MSVEDFVCKCSELLEEERGAEIEETRVLQENVSPKELQRRGVCLLKLRVQSRHTGMYGRSMLTMQPFWPG-SELPSHNLSPGDIVGISPSSGDPRVDQIASGIVSKVGQSSISVAFEESFDSLQVEDDTQYKLIKLANDVTYRRLKKALEQLNNYRTGVSSQLI-NILFGSADVSIPYTGTS------GGGVKDLAFINPHLDESQQAAVEFALNQREVAVIHGPPGTGKTTTVVEIILQAVRQGMKILACAPSNIAVDNLVERIGGASKAKAVRLGHPARILPGIQKYALDAILATSEETKLVEDVRKDLDITLTKMRRTRNKGERQSMREEMKYLRKELHQRETAAVREILKRADVVLGTLTSATEDGPLKHLDDQHFDLVVIDECSQSLEAACWIALLKGPRCILAGDHQQLPPTIISHKAAKGGLEVTLMERVLKLHGDKVMRMLTMQYRMHELIMNWSSEQLYHGKLVAHESVAKHLLKDLPGIETNENTTLPLLLIDTAGCELLELETSDEVSKGNEGEAGLVTAHVESLIASGLSAEDIAVIAPYNLQVDLLRLRLSAKYPKLEVKSVDGFQGREKEAVVISLVRSNSKGEVGFLAEDRRINVAITRARRHLAVICDSETVSHHAFLKSLVDYFNKHGEVRSAHQYQNELDLSSHYELPEHIQSSMTKASSGNTCKEQKENSGARPKANQAKKKKENK-RPGTASETAGARPH----------LSEIKQPTDED--KEELLTSIETEIMDFMADQNRTEHSFPSSLSSRGRFVVHEIAERLGITHISQGEGQSRHIMISKQPPAVSTETQRSDSAPSNVQREKDNNGVGTRGQNKKEKRNEEFCNNHQSLSLCSGPDEAILQQEQLAVITCERCLKKIPSQNYELHSLRCSGSNNATKPEPQKEQSKTKKKNKKPKSAKNEASSKEAQEEDFDALIAEAMTLNGVCNFHRCKTNVLTLGQNCEFCAKRFCLAHHIPEVHGCGDAAKSRARMLISKEGVIYRGGGVPNKKPDPAKRAHLQRKLDSKLHEFEEKRQTKKKDK 1029
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|762100193|ref|XP_011432546.1| (PREDICTED: DNA-binding protein SMUBP-2 isoform X1 [Crassostrea gigas] >gi|762100195|ref|XP_011432547.1| PREDICTED: DNA-binding protein SMUBP-2 isoform X2 [Crassostrea gigas]) HSP 1 Score: 844.729 bits (2181), Expect = 0.000e+0 Identity = 462/1042 (44.34%), Postives = 653/1042 (62.67%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAKENSSHQE-----SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSE--ARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLV-RPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRK---------------------KVTEVK-------ETPVQ-----------KAAFDD---GMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDI------------DKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEK 986 S+++F+ Q + L EREAE+ ++R + E L KEL++RG+ L +L + S RTG YGRT+++ L LPAH+IT GDIVSL + S+HQ SG+V + SAI V+F+ D +D +TKLANDVTYKRL +AL+ +K L + L G + LS P N++ I VN LD+SQ AV FAL Q E+A+VHGPPGTGKTTT++EII QA++ GN++L CAPSN+AVDNL++RL ++K +VVRLGHPARV +QK+SLDA + S++T+LV D+R ++D N S I+K+R GE+ +R ++K LRKEL RE +A KE+LK+ +VVL TL+SA P GP+++L HFD+ VIDECSQA+E ACWIPL A + +LAGDHLQLPPTI+ ++AA GL TLMER++ +G ++RML QYRM++ IM+W+S+ LY+G+L AH SV HLL+D++ V+ TE TS PLLLIDT GC + EL P+EISK NEGE +V HVE+LIK GL EIAVI PYNLQVEL+RL+L+ +P +E++SVDGFQGREKEAV++S+VRSN ++GFLAE RR+NVA+TRARRH+AV+C+SETV D FLK+ +DY+ +G V+TA ++ N V RP+ + + ++ P + K +S+ +++ +K P K + ++ ++ +E+E + + ++FQ + F+ + +F S LNSHDRM+VHE++E + LIH S G GK+RHI++ K K++E K E P Q +AA + + C C + KAN++LH+ C R P K+ +KK K +S +A + D+ D ++ +D+ C+ +KCK TLG NCEFCR RFCL H +PE+HGCG AA++ AR I R G ++ GSGVP +PDP R+AQL +LDKKL + +R+ K+ +K Sbjct: 1 MSLEKFVNQHIQLLDKEREAEIEETRHVNETLPPKELQRRGVCLLKLHIRSRRTGFYGRTVVTFEPGGA-LQELPAHNITPGDIVSLTAS---SAHQGDEGFGSGIVTHAGKSAISVAFDDKEDLYDLQEEDLYKLTKLANDVTYKRLKNALNNLKKGDFGGSSRLVDVLFGETDLSSPY-----NLK----DIHLVNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVRKDLDKNLSAIRKTRDHGEKQKIREDVKYLRKELRQREEAASKEVLKRADVVLATLSSADPRGPIRYLDNEHFDLVVIDECSQAVEAACWIPLLRAPRCVLAGDHLQLPPTILSKEAASAGLETTLMERLLDLYGGKVMRMLTTQYRMHQLIMQWSSDQLYEGKLTAHSSVATHLLRDIEKVEETEETSEPLLLIDTAGCQLYELDVPEEISKGNEGEADIVSSHVEKLIKLGLNQEEIAVIAPYNLQVELLRLRLSNDYPKVEIKSVDGFQGREKEAVIISMVRSNMKGEVGFLAEKRRINVAITRARRHLAVVCDSETVGHDAFLKSLVDYMSANGVVKTAQEFVEAGIVYNKVTRPDHL-----NDFLTLP-SNNKGAKPKSAKNQRKSHNKQKP--------AKTEGQIPEAEKYQKTEEETNE----RIKEFQGYLDTFVQEPSSGELEFPSSLNSHDRMLVHELSEKMGLIHISKGAGKERHIVVSKPGGGGGHDVVKCSSKQHLEKEKISEEKVAGAQNVELPSQAEEEFPEDKESQAAPNQKEPDKIVCRLCSKSVIKANIQLHETHCLRMQRQKSAP------KSADSSSKKHKDQSTPRAPNAHADVVAKLEKVGGDDLDSMIAAVQSVDRECSFKKCKTSTRTLGHNCEFCRRRFCLNHHIPEVHGCGDAAKAHARATIIREGVLYRGSGVPDKRPDPTRKAQLQKKLDKKLTDMATKRQGKKQKK 1005
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|1325267391|ref|XP_023341032.1| (DNA-binding protein SMUBP-2-like [Eurytemora affinis]) HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0 Identity = 470/1001 (46.95%), Postives = 641/1001 (64.04%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVS-LANAKENSSHQESGVVINVSSSAIQVSFESSLDAIKADLDD--RLNITKLANDVTYKRLSSALSRIKSEARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRK------------------KVTEVKETPVQKAAFDDGMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEK 986 +++ F+ +Q+ LA+EREAEL Q+ LLE L ++L +RG+AL++L ++ +TGLYGRTIL+L N PAH+ITSGDIV + E + SGVV++V ++I V+F+ + D++D ++ + KLANDVTY+RL++AL +K E +L N LLG+S S P Q+ SP + ++D + F+N LD SQ+ AV FAL Q E TGKTTT+VEII Q+V+SG ++L CAPSN+AVDNLL+RL K+R +RLGHPARV+ +LQK+SLDA I+ SDQ+ +VRDI EID +K + K E G R EIK LRKEL +RER +KEIL +VVLGTLTS+S DGPLKHLPENHF +TVIDECSQ+LE+ACWI + ++ K +LAGDHLQLPPTI+ ++A K GL TLMER+I +G ++VRML QYRMN+ IM W+S ALY G + A V H L D+ V+ +E T LLL+DT GC M E +T D +SK NEGE +LVCL V++L+ +G+ A+IAVI PYNLQVE IRL AK+P LEVRSVDG+QGREKE V++SLVRSNP +++GFLAE RRLNVAVTRARR V VIC+SETV TD FL+ FLDYL + G + TA Y D ++ RPE + K +K +K + + + K P++KS T + Q E ++E + + +F+ +Q+F+S +D + D + DLN ++R +VHEIA++ LIHES G+G RHI++RK K E+ ETP + C C +P+ N++LH +RC+ ++ + KK K + +D D L ++F +++K+CN E CKAK+ +GVNC FC RFCL HS+ EIHGCG+A + AARQQI+R +++ GSG DP +R QL +LDKKLN L D RK K+ +K Sbjct: 24 INMEEFVRKQKELLALEREAELEQTAQLLEGLPIRDLCQRGVALQKLWISGSKTGLYGRTILTLCQR--NSAEFPAHNITSGDIVGVIQQGGETLKPESSGVVLDVRPTSIAVAFKEGSET--GDIEDTQQMALVKLANDVTYRRLNNALDGMK-EMHTSLLSNILLGLSEPSIPHQTFSPGLLNKDNDLSFINLGLDSSQQDAVRFALKQTETTG------TGKTTTVVEIIQQSVKSGEKILVCAPSNIAVDNLLERLASAKLRCIRLGHPARVSGNLQKYSLDAVINSSDQSAIVRDIYKEIDE---ILKNKKKKNEGRGFR-EIKVLRKELKERERKVLKEILVNAQVVLGTLTSSSQDGPLKHLPENHFSLTVIDECSQSLEMACWITVSWSPKLLLAGDHLQLPPTILSQKATK-GLELTLMERLITMYGDTVVRMLTTQYRMNKNIMEWSSNALYSGRVVAGAEVAEHRLCDIPGVERSELTETVLLLVDTAGCQMQEFSTSDGVSKGNEGEASLVCLQVDKLVAAGVDPAQIAVIAPYNLQVETIRLNTRAKYPKLEVRSVDGYQGREKEVVIISLVRSNPAREVGFLAERRRLNVAVTRARRQVIVICDSETVGTDTFLREFLDYLTERGSIETADIYS---DLPDMSRPEDSGFSNKKPEKKSEKKPKKKKENKQPKQENVIK----PSLKSATFSRQTQEEKMAEEE-------------ILKSKFEIIVQEFVSSAD-TRRDLAPDLNPNERRLVHEIADSQGLIHESTGDGLSRHIVLRKRNNPEPVADEEPNMVVSNKSAEICETPADSGTKKVNSVLCETCSKEVPRTNIDLHVLRCKLKDDI-----------SIEKEKPKKSKKKEKIKFPEPEDFDSLCDQFQQMNKVCNFENCKAKVVIIGVNCNFCAKRFCLHHSMAEIHGCGAAVKLAARQQIARDHKLYPGSGTIPHTLDPVKRYQLKSKLDKKLNGLTDSRKPKKSDK 976
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|1316146292|ref|XP_023218208.1| (DNA-binding protein SMUBP-2-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 836.254 bits (2159), Expect = 0.000e+0 Identity = 454/1001 (45.35%), Postives = 642/1001 (64.14%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSL--ANAKENSSHQESGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSEARHQVLENCLLGISTLSPPLQSV-SPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRK------------------KVTEVKETPVQKAA---FDDGMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQ 983 +VD+F+ + L +ER+AE+ QS+ + + L+++G+ + +L L S TGL+GR+I P AH T+GDIV + + + +N SGVV VS + I VSFE D++ + D + +I KLAN+VTYKR+ AL +K L IS L + +P I +++ + F ND+LD+ Q+ AV F+L QKE+A++HGPPGTGKTTT+VEII Q +++G +VL CAPSN+AVDNL+++L +K ++VRLGHPAR+ D+Q++SLDA + S++ ++V D+R EID + K+S+SK +Q +E++ L+KEL +RE+ A++ ILK+ +V+L TLTSAS DGPLKH+P HFD+ VIDECSQA+E ACWIPL A K +LAGDH QLPPTI+ E+AAKEGL+ +LMER++ +G +I RML +QYRM+E IM W S +Y+ +L AH SV HLL+D++ ++ TE TS PLLLIDT GC + EL +E SK NEGE LV +HVE+LIKSG+K +IAVITPYNLQV+L+RL+L +K P LE++SVDGFQGREKEAVVLS VRSN ++GFLAE RR+NVA+TRARRH+AVIC+SETVS +FLK+F++YL G+V+TA QY+NE+ ++ RPE ++ + V ++++ KK+++ K +K+ T + E ++ + + DE E++ I+ + Q I F+ S+++ F + L+S++R +VHE+AE + LIH S GEG R+I++ K V + V +A + C C LPK N++LH RC+ V P + K +K + K K DE D+D LL K D MC KCK I+ L CEFCR FCL H +PEIHGCG AARS AR QI + G+++SGSGVPS KPDP RA L +LDKKL+ + +RK K+ Sbjct: 36 MAVDKFVSKHLELLNIERDAEVEQSQCMQTGISLANLQRKGICISKLRLGSCHTGLFGRSICVFEPFTPG-KTFEAHGFTAGDIVGIVTSGSDDNRETIASGVVSRVSQANISVSFEEKFDSLGIEDDVQYHICKLANEVTYKRMKRALLNLKDNVNSYQL------ISVLFNECKPCDNPQILNKE--LVFFNDKLDNCQKEAVRFSLSQKEIAIIHGPPGTGKTTTLVEIILQFIKNGLKVLVCAPSNIAVDNLVEKLAVHKAKIVRLGHPARLLFDIQQYSLDAILSRSEENEIVNDLRNEIDMLRRRNKQSKSKIQQEIAGKEVRSLQKELREREKVAVQRILKRADVILSTLTSASDDGPLKHIPPEHFDVVVIDECSQAIEAACWIPLLNAPKCVLAGDHQQLPPTIVSERAAKEGLSVSLMERLVNLYGETITRMLFIQYRMHEDIMAWPSSKMYENKLIAHSSVAQHLLKDMNGIEVTEETSTPLLLIDTAGCQLYELELEEEESKGNEGEADLVTIHVEKLIKSGIKPEDIAVITPYNLQVDLLRLRLTSKHPTLEIKSVDGFQGREKEAVVLSFVRSNTKGEVGFLAEDRRINVAITRARRHLAVICDSETVSNHQFLKSFVEYLNSEGDVQTAHQYENELGKFDVNRPEHLQF----KKVQSSVEKSKCNKKQNTQVKSKKEKITNQTSEKEKENISSSLKGPEVDE----ERQTIE------NEMQMKINAFLQ-SEENILTFPTILSSYERRIVHELAERIGLIHSSHGEGSDRYIILSKHEDPIVNVTDSFIKDKDENVKNLSSEVVDNSANNYLSESEENCPICNKMLPKNNLKLHIFRCK----PVVQDKPKDKCKTQKLKLRPKFEKKDSDINIDE-DLDTLLTEIKKADSMCFFTKCKTNISVLSQRCEFCRNNFCLSHHMPEIHGCGDAARSHARSQIRKQGKLYSGSGVPSKKPDPTTRAHLQKKLDKKLSEMSQQRKIKK 1007
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|1207974854|ref|XP_021378289.1| (DNA-binding protein SMUBP-2-like [Mizuhopecten yessoensis] >gi|1205887504|gb|OWF38482.1| DNA-binding protein SMUBP-2 [Mizuhopecten yessoensis]) HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0 Identity = 466/1015 (45.91%), Postives = 637/1015 (62.76%), Query Frame = 0 Query: 9 VDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAK-ENSSHQESGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSEARHQV--LENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQA-TENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNL----VRPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVV--KREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRK--------------KVTEV----------KETPVQKAAFDDGMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAAD----------DEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDER 979 +++F+G+ R L ERE E+ ++R L E L KEL++RG+ L +L + RTG YGR +++ N LP+H T GDI L+ + E SG+V S +++ ++F+ + D D + KLANDVTYKRL AL ++S V L L G L+PP + I FVN LDDSQR AV FAL Q E+AV+HGPPGTGKTTT+VE ITQAV+ GN+VL CAPSN+AVDNL++RL +NK+++VRLGHPARV +QK+SLDA + S++T+LV D+R +ID +S++KK+R KGE+ LR E+K LRKEL RE++A KEILK+ +VVL TLTSASP+GP+K L NHF++TVIDECSQA+E+ACWIPL A + +LAGDHLQLPPTI+ ++AAK+GL TLMER+I + + ++RML QYRM++ IM+W+S+ LY +L AH +V GHLL D++ V E S PLL+IDT GCD+ E+ TP+EISK NEGE +V HVE LI G+K +IAVI PYNLQVEL+RL++ KFP +E++SVDGFQGREKEAV+++LVRSN ++GFL+E RR+NVAVTRARRH+AVIC+SETVS D+FLK+ +DY+ HGEV+TA Y ID+ VRPE ++ + VSK + + K SSV+K K S + + S T + + + +D ++K D + K E+++ ++KF++++D + +F L S +RM+VHE+A L L H S GE K R I++ K + TEV E P QK L C C + +AN LH++ C R + KA + K + K+ K D D D L+ KLD++C +KCK K+ TLG NCEFC RFCL H +PEIHGCG A++ AR + G ++ S PDP R+A LH +LDKKL+ L +R Sbjct: 1 MEKFVGKHLRLLEKERETEIEETRCLTEKLPIKELQRRGICLPKLCIVGRRTGFYGRIVITFEMGR-NQQELPSHKFTPGDIAGLSQSSGEQPEDIGSGIVTRASKTSVCIAFDDNQDLFLLSDDGPYKLQKLANDVTYKRLKKALRELQSLPPCPVSQLVGVLFGERELTPPYIT---------KEITFVNQNLDDSQREAVRFALSQPEVAVIHGPPGTGKTTTVVEAITQAVKLGNKVLTCAPSNIAVDNLVERLARNKLKIVRLGHPARVLPHIQKYSLDAILANSEETKLVEDVRKDIDKAWSQMKKTRDKGEKHTLRGEMKFLRKELAQREQAATKEILKRADVVLATLTSASPEGPIKFLDANHFNLTVIDECSQAIEVACWIPLMRAPRCVLAGDHLQLPPTILSQEAAKDGLEVTLMERIIDLYHTKVIRMLTTQYRMHQLIMQWSSDQLYHSKLTAHPTVAGHLLGDMEGVNIEEEEASFPLLMIDTAGCDLNEMDTPEEISKGNEGEADIVSSHVERLITIGVKQQDIAVIAPYNLQVELLRLRIWPKFPDVEIKSVDGFQGREKEAVIITLVRSNRRGEVGFLSERRRINVAVTRARRHLAVICDSETVSHDEFLKSLVDYMASHGEVQTAQDY---IDSGVFNNKSVRPEHLDDLLTLNSVSKSKGSGARPK--SSVSKP-KHSHSSDSRNSTTSAIGSSRDRRNRD----NDKNICDEAMTEKKTEKYREILEKFVANADVNCMEFPPTLTSFERMLVHELAGKLSLTHVSKGEDKGRFIVVSKPGGQSVSVTTETSVQSTEVPVVIENTGHLDEIPSQKKEKQSDKLVCPHCNKDVIRANFSLHEIHCLRQQRDCSAKASEKSQKASSRKDQTKQQNGTKKLRPPSATAKIEKVDADDFDGLIAAAQKLDEVCGFKKCKVKVKTLGQNCEFCMRRFCLSHHIPEIHGCGEVAKAHARSTHIKEGVLYRSSTTKPAPPDPKRQAALHRKLDKKLSDLTSQR 995
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|1117361999|ref|XP_019375395.1| (PREDICTED: DNA-binding protein SMUBP-2 [Gavialis gangeticus]) HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0 Identity = 463/1022 (45.30%), Postives = 627/1022 (61.35%), Query Frame = 0 Query: 9 VDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVS-SHPNLPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLDAIKA-DLDDRLNITKLANDVTYKRLSSALSRIKSEARHQVLE--NCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLV------RPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKKVTEVKETPVQKAAFDDGMLQCSGCLARLPK-----------ANMELHKV-------------------RCRRSHAAVPNPPPVEVAKAVAVKAKKK-KAKSAGKAADD--EQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 V F +Q + L EREAE+ ++R+ E++ KEL++RG+ L +L +AS RTGLYGR +++ + + LP +S GDIV L + + +G+V +V+ + ++FE S D + + D + + KLAND+TYKRL AL+ + + L S SPP E ++F N+ LD SQ+ AV F+L QKELA++HGPPGTGKTTT+VEII QAV+ G +VLCCAPSNVAVDNL++RL KVR++RLGHPAR+ + +Q SLDA + D Q+V DIR +ID F++ K+++ KGE+S EIK LRKEL +RE +AM +L Q +VVL T T ASPDGPLK LPENHFD+ VIDEC+QALE +CWIPL A+K ILAGDH QLPPTI+ +AA +GL+ +LMER+I+++G SIVRML VQYRM++AIM+WAS +Y G L AH SV HLL+DL V +TE T +PLLLIDT GC + EL DE SK N+GEV LV LHV+ L+ +G+KA +IAVI PYNLQV+++R L K+P LE++SVDGFQGREKEAV+LS VRSN ++GFLAE RR+NVA+TRARRHVAV+C+S TVS FLK +DYL +HGE RTA +Y ++I N PE E P+ T K S +K K + P + KA A G E+ ++ + K F+A + F+ +S ++ DF LNSHDRM++H++AE L H S GEG++R++ IRK+ V A + Q C + P ++M KV R RR+ + V +A K K + K K+A KA + E+DID L+ K D C +CKA IATLG C C R+CL H +PE+HGCG A+ ARQ+IS+ G +++GSG DP +RA L RLDKKLN L ++RK+K+ +++ Sbjct: 3 VQGFAARQLQLLQEEREAEIGEARAWRENISLKELQRRGVCLLKLQVASQRTGLYGRLLVTFQPRKYESDVELPYNSFGPGDIVGLYESTDQGDPLSTGIVTHVTPKLVTIAFEESRDGLLSLDRESSYRLLKLANDITYKRLKKALNTLSQYHSGPAFNLIDVLFFSSDPSPP---------SETRPLKFYNELLDISQQEAVSFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAAYKVRILRLGHPARLLESIQHHSLDAVLARGDNAQIVADIRKDIDQAFARTKRTQDKGERSHFLNEIKTLRKELKEREETAMTTVLTQADVVLATNTGASPDGPLKLLPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIQKYGESIVRMLTVQYRMHQAIMQWASTEMYGGRLTAHPSVAHHLLKDLPGVASTEETRMPLLLIDTAGCGLFELEVEDEQSKGNQGEVRLVGLHVQALVNAGVKAKDIAVIAPYNLQVDMLREHLCPKYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAITRARRHVAVVCDSRTVSNQVFLKQLVDYLSEHGEARTAFEYLDDIVPENYSHENSQGHPEQGE---------GPKTVPSSTPKPQSHGQKAKPAAGKPILP------KASVGPAQNVNGIGKERMEVKDNSGK---FKAMLVDFL-ESSKAQLDFPPSLNSHDRMLLHQMAEEYRLQHVSTGEGRQRYLSIRKRPPATVSATVTNKANE----QAPSCESEGPPREAPSPGQTGGSSMSSGKVDLKVLHLERMQQEKAKWEERARRTQES-----SVNLAGTAGKKHKNEAKGKTAAKADNTTAEEDIDTLISAVVKADNTCGFPRCKASIATLGQLCLHCNKRYCLSHHIPEVHGCGEKAKVHARQRISKEGVLYAGSGSKDKSLDPTKRAHLQRRLDKKLNELSNQRKSKKKDQE 987
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|884909864|ref|XP_003468365.2| (DNA-binding protein SMUBP-2 [Cavia porcellus]) HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0 Identity = 473/1014 (46.65%), Postives = 627/1014 (61.83%), Query Frame = 0 Query: 9 VDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPN----LPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLD-AIKADLDDRLNITKLANDVTYKRLSSALSRIKS--EARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLVR--PEGMELTIKDQIVSKPRKETQKTKK-----------ESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKKVTEVKE-TPVQKAAFDDGML------QCSGCLARLPKANMELHKVRCRRSHAAVPNPP----PVEVAKAVAVKAKKKKAKSAGKAADD---EQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKKT 988 V+ F+ + L +ER+AE+ + RS E++ KEL+ RG+ L +L ++S RTGLYGR LV+ P + LP++S TSGDIV L + +G++ ++ ++ V+F+ S D + D ++ + KLANDVTYKRL AL +K L L G S SP Q + P ++F N LD SQ+ AV FAL QKELA++HGPPGTGKTTT+VE+I QAV+ G +VLCCAPSNVAVDNL++RL K+R++RLGHPAR+ + +Q+ SLDA + SD Q+V DIR +ID F K KK++ K ++S R EIK+LRKEL +RE +AM E L VVL T T ASPDGPLK LPE++FD+ VIDEC QALE +CWIPL A+K ILAGDH QLPPT + QAA+EGL+ +LMER+ ++ G +VR L VQYRM++AIM WASEA+Y G+L AH SV G LL+DL V ATE T IPLLL+DT C + EL D+ SK N GEV LV LH++ L+ +G++A++IAVITPYNLQV+L+R L K P LE++SVDGFQGREKEAVVLS VRSN ++GFLAE RR+NVAVTRARRHVA++C+S TV+ FLK +DY+ +HGEVRTA +Y ++I +N P+G Q +KPR T +K E+ A ++ + K P K V +Q GD E + E+F+A I++F++ S++ F + LNSHDR+ VH+IAE L H+S GEGK R I + K+ V P+ A G QC+ L LH R +R P PV + KKKK ++ G+ A D E+D D L+ K D C+ KC A + TLG C+FC R+CL H LPE+HGCG AR ARQ+ISR G +++GSG DP +RAQL RLDKKL L +R +K+ EK T Sbjct: 69 VETFVAKHLYLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRL---LVTFEPRRCGPVAVLPSNSFTSGDIVGLYDTANEGRQLATGILTRITQKSVSVAFDESHDFQLTLDRENFYRLLKLANDVTYKRLKKALVTLKKYHSGPASSLIEVLFGGSDPSP-AQEIPP--------LKFYNTALDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQAVKQGLKVLCCAPSNVAVDNLVERLALRKLRILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADIRKDIDQIFVKNKKTQEKKDKSNFRSEIKQLRKELKEREEAAMVESLTAASVVLATNTGASPDGPLKLLPESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHQAAQEGLSLSLMERLAEEHGDKVVRTLTVQYRMHQAIMHWASEAMYGGQLTAHSSVAGQLLRDLPGVTATEETGIPLLLVDTASCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLEHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVALVCDSRTVNNHPFLKTLVDYVTQHGEVRTAFEYLDDIVPVNYAHEGPQG-----HSQAAAKPRGPTSSARKLPRSGRPEGGQEAGAAARQHQKK--PGTKPLASEVPSQPRF----NGDSQEGPRVADGT---ERFRAMIEEFVA-SEEMQLRFPASLNSHDRLRVHQIAEEYGLRHDSAGEGKARCITVSKRGHGVSSRAPLPAVASSPGQPERPPEEQCTQAGVDL----KVLHLERLQRVQGTQEQPAKKEQPVLGSGLQKFPEKKKKKEAKGRPARDQPTEEDFDALVSAAVKADNTCSFAKCSASVVTLGQFCQFCGHRYCLSHHLPEVHGCGEKARVHARQRISREGVLYAGSGTKDRSLDPAKRAQLQRRLDKKLGELSSQRASKRKEKGT 1051
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|405955090|gb|EKC22334.1| (DNA-binding protein SMUBP-2 [Crassostrea gigas]) HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0 Identity = 455/1042 (43.67%), Postives = 646/1042 (62.00%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAKENSSHQE-----SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSE--ARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLV-RPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRK---------------------KVTEVK-------ETPVQ-----------KAAFDD---GMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADDEQDI------------DKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEK 986 S+++F+ Q + L EREAE+ ++R + E L KEL++RG+ L +L + S RTG YGRT+++ L LPAH+IT GDIVSL + S+HQ SG+V + SAI V+F+ D +D +TKLANDVTYKRL +AL+ +K L + L G + LS P N++ I VN LD+SQ AV FAL Q E+A+VHGPPGTGKTTT++EII QA++ GN++L CAPSN+AVDNL++RL ++K +VVRLGHPARV +QK+SLDA + S++T+LV D+R ++D N S I+K+R GE+ +R ++K LRKEL RE +A KE+LK+ +VVL TL+SA P GP+++L HFD+ VIDECSQA+E ACWIPL A + +LAGDHLQLPPTI+ ++AA GL TLMER++ +G ++RML QYRM++ IM+W+S+ LY+G+L AH SV HLL+D++ V+ TE TS PLLLIDT GC + EL P+EISK NEGE +V HVE+LIK GL EIA VEL+RL+L+ +P +E++SVDGFQGREKEAV++S+VRSN ++GFLAE RR+NVA+TRARRH+AV+C+SETV D FLK+ +DY+ +G V+TA ++ N V RP+ + + ++ P + K +S+ +++ +K P K + ++ ++ +E+E + + ++FQ + F+ + +F S LNSHDRM+VHE++E + LIH S G GK+RHI++ K K++E K E P Q +AA + + C C + KAN++LH+ C R P K+ +KK K +S +A + D+ D ++ +D+ C+ +KCK TLG NCEFCR RFCL H +PE+HGCG AA++ AR I R G ++ GSGVP +PDP R+AQL +LDKKL + +R+ K+ +K Sbjct: 1 MSLEKFVNQHIQLLDKEREAEIEETRHVNETLPPKELQRRGVCLLKLHIRSRRTGFYGRTVVTFEPGGA-LQELPAHNITPGDIVSLTAS---SAHQGDEGFGSGIVTHAGKSAISVAFDDKEDLYDLQEEDLYKLTKLANDVTYKRLKNALNNLKKGDFGGSSRLVDVLFGETDLSSPY-----NLK----DIHLVNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVRKDLDKNLSAIRKTRDHGEKQKIREDVKYLRKELRQREEAASKEVLKRADVVLATLSSADPRGPIRYLDNEHFDLVVIDECSQAVEAACWIPLLRAPRCVLAGDHLQLPPTILSKEAASAGLETTLMERLLDLYGGKVMRMLTTQYRMHQLIMQWSSDQLYEGKLTAHSSVATHLLRDIEKVEETEETSEPLLLIDTAGCQLYELDVPEEISKGNEGEADIVSSHVEKLIKLGLNQEEIA--------VELLRLRLSNDYPKVEIKSVDGFQGREKEAVIISMVRSNMKGEVGFLAEKRRINVAITRARRHLAVVCDSETVGHDAFLKSLVDYMSANGVVKTAQEFVEAGIVYNKVTRPDHL-----NDFLTLP-SNNKGAKPKSAKNQRKSHNKQKP--------AKTEGQIPEAEKYQKTEEETNE----RIKEFQGYLDTFVQEPSSGELEFPSSLNSHDRMLVHELSEKMGLIHISKGAGKERHIVVSKPGGGGGHDVVKCSSKQHLEKEKISEEKVAGAQNVELPSQAEEEFPEDKESQAAPNQKEPDKIVCRLCSKSVIKANIQLHETHCLRMQRQKSAP------KSADSSSKKHKDQSTPRAPNAHADVVAKLEKVGGDDLDSMIAAVQSVDRECSFKKCKTSTRTLGHNCEFCRRRFCLNHHIPEVHGCGDAAKAHARATIIREGVLYRGSGVPDKRPDPTRKAQLQKKLDKKLTDMATKRQGKKQKK 997
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|1242777226|ref|XP_022328302.1| (DNA-binding protein SMUBP-2-like [Crassostrea virginica]) HSP 1 Score: 821.617 bits (2121), Expect = 0.000e+0 Identity = 463/1043 (44.39%), Postives = 650/1043 (62.32%), Query Frame = 0 Query: 7 FSVDRFLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVSSHPNLPNLPAHSITSGDIVSLANAKENSSHQE-----SGVVINVSSSAIQVSFESSLDAIKADLDDRLNITKLANDVTYKRLSSALSRIKSE--ARHQVLENCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALN-LVRPEGME--LTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILI---------------------------RKKVTE-VKETPVQKAAF-------------DDGMLQCSGCLARLPKANMELHKVRCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAAD------------DEQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEK 986 +++ F+ Q + L EREAE+ ++ L + L KEL++RG+ L +L + S RTG YGRT+++ + LPAH++T GDIVSL NA +SS QE SG+V + SAI V+F+ D +D +TKLANDVTYKRL +AL+ ++ + L N L G + LSPP + I VN LD+SQ AV+FAL Q E+A+VHGPPGTGKTTT++EII QA++ GN++L CAPSN+AVDNL++RL NK RVVRLGHPARV +QK+SLDA + S++T+LV D+R ++D N S I+K+ +GE+ +R +IK LRKEL RE +A +E+LK+ +VVL TL+SA P GP+K+L HFD+ VIDECSQA+E ACWIPL A + +LAGDHLQLPPTI+ ++AA GL TLMER++ + ++RML QYRM++ IM+W+S+ LY+G+L AH SV HLL+D+++V+ E TS PLLLIDT GC + EL P+EISK NEGE +V HVE+LI G+ EIAVI PYNLQVEL+RL+L+ +P +E++SVDGFQGREKEAV++SLVRSN ++GFLAE RR+NVA+TRARRH+AV+C+SETV D FLK+ ++Y+ +G V+TA ++ N + RP+ + LT+ ++P+ AK +KKS +S+ VKA+ +V ++ +E+E + + ++FQ + F+ + +F S LNSHDRM+VHE++E + LIH S G GK RHI++ K V + VK +P +K + + C C + KAN++LH+ C R P K+ KK+K S K + D D+D L+ +D++C+ +KCK TL +CEFCR RFCL H +PE+HGCG AA++ AR I R G ++ GSGVP KPDP ++AQL +LDKKL + +R+AK+ +K Sbjct: 1 MTLETFVNQHIQLLEKEREAEIEETSHLNDTLPPKELQRRGVCLLKLHIRSRRTGFYGRTVVTFEPGGGS-QELPAHNLTPGDIVSL-NA--SSSQQENESLGSGIVTHAGKSAISVAFDEKEDLFDLKEEDHYKLTKLANDVTYKRLKNALNNLRKGDFGKSSKLVNVLFGEAELSPPF---------DLKDIHLVNTGLDESQEDAVKFALSQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLALNKQRVVRLGHPARVLPHIQKYSLDAILSSSEETRLVEDVRKDLDKNLSAIRKTADRGEKQKIREDIKFLRKELKQREDAASREVLKRADVVLATLSSADPSGPIKYLDNEHFDLVVIDECSQAVEAACWIPLLRAPRCVLAGDHLQLPPTILSKEAASAGLEKTLMERILDLYNGKVMRMLTTQYRMHKLIMQWSSDQLYEGKLTAHSSVADHLLRDIEYVEEEEETSEPLLLIDTAGCQLFELDVPEEISKGNEGEADIVSNHVEKLISLGVSQEEIAVIAPYNLQVELLRLRLSNNYPKVEIKSVDGFQGREKEAVIISLVRSNKKGEVGFLAEKRRINVAITRARRHLAVVCDSETVGHDTFLKSLVEYMSTNGVVKTAQEFVEAGIVYNKITRPDHLNDLLTLPSNKGARPKS-----------AKNQKKS------QSKQKPVKAEDQVPPLEKYHKTEEETNE----RIKEFQGYLDNFVQEESSGELEFPSSLNSHDRMLVHELSEKMGLIHISKGAGKDRHIVVSKPGSSSPSGVRTTVQSPFENSERPDTEKPVNQAVKSSPTEKEDLEGVPDTREIPSQKESDKIVCRHCSKSVIKANIQLHETHCLRQQREKSAP------KSANSVGKKQKNASVPKIPNTHADVMAKLDKVDGDDLDSLIAAVQSVDRVCSFKKCKTSTQTLSQSCEFCRRRFCLSHHIPEVHGCGEAAKAHARATIIREGVLYRGSGVPDKKPDPTQKAQLQRKLDKKLTEMATKRQAKKSKK 1003
BLAST of dna-binding protein smubp-2 vs. nr
Match: gi|951014652|ref|XP_006275117.2| (PREDICTED: DNA-binding protein SMUBP-2 isoform X1 [Alligator mississippiensis] >gi|1011604492|gb|KYO41590.1| DNA-binding protein SMUBP-2 [Alligator mississippiensis]) HSP 1 Score: 819.305 bits (2115), Expect = 0.000e+0 Identity = 462/1018 (45.38%), Postives = 624/1018 (61.30%), Query Frame = 0 Query: 12 FLGQQERWLAMEREAELAQSRSLLEHLDAKELEKRGLALRQLVLASHRTGLYGRTILSLVS-SHPNLPNLPAHSITSGDIVSLANAKENSSHQESGVVINVSSSAIQVSFESSLDAIKA-DLDDRLNITKLANDVTYKRLSSALSRIKSEARHQVLE--NCLLGISTLSPPLQSVSPNIRHEDGSIRFVNDRLDDSQRSAVEFALLQKELAVVHGPPGTGKTTTIVEIITQAVRSGNRVLCCAPSNVAVDNLLDRLVKNKVRVVRLGHPARVNKDLQKFSLDAQIDLSDQTQLVRDIRGEIDSNFSKIKKSRSKGEQSGLRREIKELRKELHDRERSAMKEILKQTEVVLGTLTSASPDGPLKHLPENHFDITVIDECSQALELACWIPLPFAKKAILAGDHLQLPPTIMCEQAAKEGLNFTLMERVIKQFGSSIVRMLKVQYRMNEAIMRWASEALYQGELQAHESVRGHLLQDLDWVQATENTSIPLLLIDTTGCDMPELATPDEISKANEGEVALVCLHVEELIKSGLKAAEIAVITPYNLQVELIRLQLAAKFPGLEVRSVDGFQGREKEAVVLSLVRSNPNKDIGFLAESRRLNVAVTRARRHVAVICNSETVSTDKFLKAFLDYLEKHGEVRTALQYQNEIDALNLV------RPEGMELTIKDQIVSKPRKETQKTKKESSVAKKEKKSKDTPTVKSETHHVKAQAEVAGQDEGDLSEKEDIDPDVVKREQFQATIQKFMSDSDQSSHDFSSDLNSHDRMVVHEIAETLDLIHESVGEGKKRHILIRKK------------------VTEVKETPVQKAAFDD--GMLQCSGC--LARLPKANMELHKV----RCRRSHAAVPNPPPVEVAKAVAVKAKKKKAKSAGKAADD------EQDIDKLLERFSKLDKMCNHEKCKAKIATLGVNCEFCRVRFCLEHSLPEIHGCGSAARSAARQQISRSGRIFSGSGVPSMKPDPNRRAQLHFRLDKKLNSLGDERKAKQPEKK 987 F +Q + L EREAE++++R+ E++ KEL++RG+ L +L AS RTGLYGR +++ + + LP +S GDIV L + + +G+V +V+ + ++FE S D + + D + + KLANDVTYKRL AL+ + + L S SPP E ++F N+ LD SQ+ AV F+L QKELA++HGPPGTGKTTT+VEII QAV+ G +VLCCAPSNVAVDNL++RL KVR++RLGHPAR+ + +Q SLDA + D Q+V DIR +ID F+K K+++ KGE+S EIK LRKEL +RE +AM +L Q +VVL T T ASPDGPLK LPENHFD+ VIDEC+QALE +CWIPL A+K ILAGDH QLPPTI+ +AA +GL+ +LMER+I+++G SIVRML VQYRM++AIM+WAS +Y G L AH SV HLL+DL V +TE T IPLLL+DT GC + EL DE SK N+GEV LV LHV+ L+ +G+KA +IAVI PYNLQV+++R L K+P LE++SVDGFQGREKEAV+LS VRSN ++GFLAE RR+NVAVTRARRHVAV+C+S TVS FLK +DY +HGEVRTA +Y ++I N PE E P+ T K +K K + P + K A G E+ ++ + K F+A + F+ +S ++ DF LNSHDRM++H++AE L H S GEG++R++ IRK+ +E + TP + + G SG L L M+ K R RR+ + N V KK K ++ GK+A E+DID L+ K D C +CKA + TLG C C R+CL H +PE+HGCG A+ ARQ+IS+ G +++GSG DP +RA L RLDKKLN L ++RK+K+ +++ Sbjct: 6 FATRQLQLLQEEREAEISEARTWRENISLKELQRRGVCLLKLQAASQRTGLYGRLLVTFQPRKYESDVELPYNSFGPGDIVGLYESTDQGDPLSTGIVTHVTPKLVTIAFEESRDGLLSLDRESSYRLLKLANDVTYKRLKKALNTLSQYHSGPAFNLIDVLFFSSDPSPP---------SETRPLKFYNELLDISQQEAVSFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAAYKVRILRLGHPARLLESIQHHSLDAVLARGDNAQIVADIRKDIDQAFAKTKRTQDKGERSHFLNEIKTLRKELKEREETAMTTVLTQADVVLATNTGASPDGPLKLLPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIQKYGESIVRMLTVQYRMHQAIMQWASTEMYGGRLTAHPSVAHHLLKDLPGVASTEETRIPLLLVDTAGCGLFELEVEDEQSKGNQGEVHLVGLHVQALVNAGVKAKDIAVIAPYNLQVDMLREHLCHKYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNQVFLKRLVDYFGEHGEVRTAFEYLDDIVPENYSHENSQGHPEQGE---------GPKTVPLSTPKPQPHGQKAKPAPGKPILP------KPSIGPAESMNGTGKERMEVKDNSAK---FKAMLVDFL-ESSKAQLDFPPSLNSHDRMLLHQMAEEYGLQHVSTGEGRQRYLSIRKRPPATVSATVTNKANEQAPSSESERTPREAPSPGQTGGSSMSSGKVDLKMLHLKRMQWEKAKWEERVRRTQESSVN--------LVETAGKKHKNEAKGKSATKADNTTAEEDIDTLISAVVKADNTCGFPRCKASVTTLGQLCLHCNKRYCLSHHIPEVHGCGEKAKVHARQRISKEGVLYAGSGSKDKSLDPTKRAHLQRRLDKKLNELSNQRKSKKKDQE 987 The following BLAST results are available for this feature:
BLAST of dna-binding protein smubp-2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 9
BLAST of dna-binding protein smubp-2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna-binding protein smubp-2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1716_size30199:17880..28033- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1716_size30199-snap-gene-0.9 ID=maker-scaffold1716_size30199-snap-gene-0.9|Name=dna-binding protein smubp-2|organism=Tigriopus kingsejongensis|type=gene|length=10154bp|location=Sequence derived from alignment at scaffold1716_size30199:17880..28033- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna-binding protein smubp-2' has the following synonyms
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