GM13182, maker-scaffold172_size289735-snap-gene-0.18 (gene) Tigriopus kingsejongensis

Overview
NameGM13182
Unique Namemaker-scaffold172_size289735-snap-gene-0.18
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000005641 (supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1 gene:EMLSAG00000005641 transcript:EMLSAT00000005641 description:"maker-LSalAtl2s303-augustus-gene-3.23")

HSP 1 Score: 172.17 bits (435), Expect = 2.298e-51
Identity = 87/108 (80.56%), Postives = 90/108 (83.33%), Query Frame = 0 
Query:   16 SRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 113
            SR +RAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+G TIAQGG LPNIQA+L  KK   K
Sbjct:  576 SRXSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGXTIAQGGXLPNIQALLFLKKYANK 683
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000012511 (supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-1 gene:EMLSAG00000012511 transcript:EMLSAT00000012511 description:"maker-LSalAtl2s921-augustus-gene-1.59")

HSP 1 Score: 152.525 bits (384), Expect = 2.828e-49
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 0 
Query:   17 RSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 111
            RS+RAGLQFP          GNYAERVGAGAPVYLAA +EYLAAE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+GVTIAQGGVLPNIQAVLLPKK+E
Sbjct:   27 RSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAXLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKSE 131
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000007561 (supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1 gene:EMLSAG00000007561 transcript:EMLSAT00000007561 description:"augustus_masked-LSalAtl2s436-processed-gene-4.1")

HSP 1 Score: 149.058 bits (375), Expect = 1.258e-48
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0 
Query:   33 VGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            +GAGAPVYLAAVME LAAEVLELAGNAARDNK TRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLL KKTEK A
Sbjct:    1 MGAGAPVYLAAVMEXLAAEVLELAGNAARDNKXTRIIPRHLQLAIRNDEELNKLLVGVTIAQGGVLPNIQAVLLSKKTEKSA 82
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000001108 (supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 gene:EMLSAG00000001108 transcript:EMLSAT00000001108 description:"augustus_masked-LSalAtl2s1185-processed-gene-0.1")

HSP 1 Score: 147.902 bits (372), Expect = 1.017e-47
Identity = 93/109 (85.32%), Postives = 95/109 (87.16%), Query Frame = 0 
Query:   16 SRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            SRS+RAGLQFP          GNYAERVGAGAPVYLAAV E LAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL+GV IAQGGVLPNIQAVLLPKKTEK A
Sbjct:   16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVXEXLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLAGVXIAQGGVLPNIQAVLLPKKTEKSA 124
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000008130 (supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-1 gene:EMLSAG00000008130 transcript:EMLSAT00000008130 description:"augustus_masked-LSalAtl2s484-processed-gene-3.0")

HSP 1 Score: 136.346 bits (342), Expect = 6.973e-43
Identity = 73/120 (60.83%), Postives = 79/120 (65.83%), Query Frame = 0 
Query:    5 GKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            GKGG V G +K  S+R GLQ P          G YAE VGA  PVYLAAVM  L  EVLE  GN + DN  TRIIPRHL LAIRNDEEL KLL+  +I QG + PNI AVLLPKK EK A
Sbjct:   18 GKGGNVGGDSKYCSSRTGLQLPVGRFHRFLRKGYYAESVGANTPVYLAAVMYCLTTEVLESXGNXSCDNTNTRIIPRHLLLAIRNDEELKKLLASXSILQGSIXPNIXAVLLPKKNEKSA 137
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000003537 (supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-1 gene:EMLSAG00000003537 transcript:EMLSAT00000003537 description:"augustus-LSalAtl2s193-processed-gene-3.2")

HSP 1 Score: 130.954 bits (328), Expect = 1.947e-40
Identity = 64/88 (72.73%), Postives = 71/88 (80.68%), Query Frame = 0 
Query:   27 GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            GNY E VGAGAP+YL AV+EYLAAEVLEL GNAARD++K RI   HLQL I ND ELNKLL+G TIAQGGVLPNIQAV  P K +K +
Sbjct:   77 GNYTECVGAGAPIYLTAVIEYLAAEVLELVGNAARDDRKARIFTLHLQLVICNDGELNKLLAGETIAQGGVLPNIQAVTWPYKMDKSS 164
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000008824 (supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1 gene:EMLSAG00000008824 transcript:EMLSAT00000008824 description:"snap_masked-LSalAtl2s54-processed-gene-2.1")

HSP 1 Score: 108.997 bits (271), Expect = 1.616e-32
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 0 
Query:   28 NYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 112
            N  ER+GAG  +YL AVMEYLAAEVLELAGNAA DN+KTRII  HLQL I NDE+L K+L+  TI +G +L NIQ V + K  EK
Sbjct:   24 NSGERIGAGTSIYLVAVMEYLAAEVLELAGNAAHDNRKTRIIYIHLQLVICNDEKLYKMLAT-TITKGVILHNIQTVFIYKNNEK 107
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000001981 (supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 gene:EMLSAG00000001981 transcript:EMLSAT00000001981 description:"augustus_masked-LSalAtl2s1352-processed-gene-0.2")

HSP 1 Score: 96.6709 bits (239), Expect = 4.289e-27
Identity = 72/160 (45.00%), Postives = 82/160 (51.25%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAK----SRSNRAGLQFP-----------GNYAERVGAGAPVYLAAVMEYLAAE--------------------------------VLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 113
            M+G GK GK  GKAK    SRS RAGLQFP                RVGA A VY AA++E L AE                                VLELAGNA++D K  RI PRHLQLAIR DEEL+ L+   TIA GGV+P+I   L+ KK E K
Sbjct:    1 MAG-GKAGKDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEXLTAEXIAMIIMIDKYYSLKDIAIIFILFNSSTFIHQVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKA-TIAGGGVIPHIHKSLIGKKGEGK 158
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000011020 (supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-1 gene:EMLSAG00000011020 transcript:EMLSAT00000011020 description:"snap_masked-LSalAtl2s741-processed-gene-2.19")

HSP 1 Score: 83.9593 bits (206), Expect = 5.482e-23
Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 0 
Query:   44 VMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLP-KKTEK 112
            +  YL  EVLEL GN     KKT II  HLQLAIR D+EL KLL+GVTIA  G+L NIQAVLLP KKTEK
Sbjct:   16 IQTYLTHEVLELPGNY----KKTHIIHCHLQLAIRRDKELKKLLAGVTIAHCGILHNIQAVLLPKKKTEK 81
[Close]
BLAST of GM13182 vs. L. salmonis genes
Match: EMLSAG00000012597 (supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-1 gene:EMLSAG00000012597 transcript:EMLSAT00000012597 description:"augustus_masked-LSalAtl2s944-processed-gene-0.3")

HSP 1 Score: 80.4925 bits (197), Expect = 1.337e-21
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTR 67
            M G+GKG K KGK++S S+R GLQF            +  +RVGAGA VYL  V EYL AE+LE+  N ARDNKKTR
Sbjct:    1 MRGQGKGSKAKGKSRSCSSRDGLQFSVKRIHRLLRKDSTTDRVGAGAFVYLVVVQEYLTAEILEMVENTARDNKKTR 77
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|122044770|sp|P02269.2|H2A_ASTRU (RecName: Full=Histone H2A)

HSP 1 Score: 202.986 bits (515), Expect = 5.503e-68
Identity = 106/124 (85.48%), Postives = 109/124 (87.90%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGK + KAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAE+LELAGNAARDNKKTRI PRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT K A
Sbjct:    1 MSGRGKGGKARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRINPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTAKAA 124
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|121987|sp|P16886.2|H2AL_STRPU (RecName: Full=Late histone H2A.L3)

HSP 1 Score: 197.208 bits (500), Expect = 1.312e-65
Identity = 103/123 (83.74%), Postives = 108/123 (87.80%), Query Frame = 0 
Query:    1 MSGRGKG-GKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 112
            MSGRGKG GK + KAKSRS RAGLQFP          GNYA+RVGAGAPVYLAAV+EYLAAE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT K
Sbjct:    1 MSGRGKGAGKARAKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|122004|sp|P02264.2|H2A_ONCMY (RecName: Full=Histone H2A)

HSP 1 Score: 196.438 bits (498), Expect = 2.370e-65
Identity = 102/123 (82.93%), Postives = 108/123 (87.80%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 112
            MSGRGK GGK + KAK+RS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKTEK
Sbjct:    1 MSGRGKTGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTEK 123
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|74733131|sp|Q9BTM1.1|H2AJ_HUMAN (RecName: Full=Histone H2A.J; Short=H2a/j >gi|122143023|sp|Q3ZBX9.1|H2AJ_BOVIN RecName: Full=Histone H2A.J; Short=H2a/j)

HSP 1 Score: 196.052 bits (497), Expect = 3.365e-65
Identity = 103/124 (83.06%), Postives = 108/124 (87.10%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 113
            MSGRGK GGKV+ KAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQAVLLPKKTE +
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQ 124
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|75075512|sp|Q4R3X5.1|H2AJ_MACFA (RecName: Full=Histone H2A.J; Short=H2a/j)

HSP 1 Score: 196.052 bits (497), Expect = 3.516e-65
Identity = 103/124 (83.06%), Postives = 108/124 (87.10%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 113
            MSGRGK GGKV+ KAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQAVLLPKKTE +
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESQ 124
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|81878911|sp|Q8R1M2.1|H2AJ_MOUSE (RecName: Full=Histone H2A.J; Short=H2a/j >gi|205831582|sp|A9UMV8.1|H2AJ_RAT RecName: Full=Histone H2A.J; Short=H2a/j)

HSP 1 Score: 195.667 bits (496), Expect = 4.575e-65
Identity = 103/124 (83.06%), Postives = 108/124 (87.10%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 113
            MSGRGK GGKV+ KAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQAVLLPKKTE +
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESQ 124
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|82191289|sp|P70082.1|H2AJ_CHICK (RecName: Full=Histone H2A.J; Short=H2a/j; AltName: Full=Histone H2A-IX)

HSP 1 Score: 195.282 bits (495), Expect = 6.152e-65
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 111
            MSGRGK GGKV+ KAKSRS+RAGLQFP          GNYAERVGAGAPVY+AAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLL  VTIAQGGVLPNIQAVLLPKKTE
Sbjct:    1 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN (RecName: Full=Histone H2A type 2-B)

HSP 1 Score: 195.282 bits (495), Expect = 8.544e-65
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 111
            MSGRGK GGK + KAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQAVLLPKKTE
Sbjct:    1 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|121966|sp|P06897.2|H2A1_XENLA (RecName: Full=Histone H2A type 1)

HSP 1 Score: 194.897 bits (494), Expect = 9.226e-65
Identity = 100/122 (81.97%), Postives = 107/122 (87.70%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 111
            MSGRGK GGK + KAK+RS+RAGLQFP          GNYAERVGAGAPVYLAAV+EYL AE+LELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLL GVTIAQGGVLPNIQ+VLLPKKTE
Sbjct:    1 MSGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQSVLLPKKTE 122
[Close]
BLAST of GM13182 vs. SwissProt
Match: gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN (RecName: Full=Histone H2A type 1-A; AltName: Full=Histone H2A/r)

HSP 1 Score: 194.512 bits (493), Expect = 1.446e-64
Identity = 100/122 (81.97%), Postives = 107/122 (87.70%), Query Frame = 0 
Query:    1 MSGRGK-GGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 111
            MSGRGK GGK + K+KSRS+RAGLQFP          GNYAER+GAGAPVYLAAV+EYL AE+LELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLL GVTIAQGGVLPNIQAVLLPKKTE
Sbjct:    1 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of GM13182 vs. nr
Match: gi|1321329565|ref|XP_023307652.1| (histone H2A [Lucilia cuprina] >gi|1108464811|emb|CRL07048.1| CLUMA_CG019995, isoform A [Clunio marinus] >gi|1108464820|emb|CRL07057.1| CLUMA_CG019989, isoform A [Clunio marinus] >gi|1108464825|emb|CRL07062.1| CLUMA_CG019997, isoform A [Clunio marinus] >gi|1108464830|emb|CRL07067.1| CLUMA_CG019996, isoform A [Clunio marinus] >gi|1108464833|emb|CRL07070.1| CLUMA_CG019990, isoform A [Clunio marinus])

HSP 1 Score: 215.698 bits (548), Expect = 1.692e-70
Identity = 113/124 (91.13%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKVK KAKSRSNRAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|195371155|ref|XP_002045914.1| (GM13182 [Drosophila sechellia] >gi|194122083|gb|EDW44126.1| GM13182 [Drosophila sechellia])

HSP 1 Score: 215.698 bits (548), Expect = 1.692e-70
Identity = 113/124 (91.13%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGK GKVKGKAKSRSNRAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKSGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|1036069662|ref|XP_016938452.1| (PREDICTED: histone H2A-like [Drosophila suzukii])

HSP 1 Score: 215.312 bits (547), Expect = 2.275e-70
Identity = 113/124 (91.13%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKV GKAKSRSNRAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVNGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|194202619|gb|EDX16195.1| (GD12842 [Drosophila simulans])

HSP 1 Score: 214.927 bits (546), Expect = 2.742e-70
Identity = 113/124 (91.13%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGK GKVKGKAKSRSNRAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKDGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|195442960|ref|XP_002069208.1| (histone H2A [Drosophila willistoni] >gi|194165293|gb|EDW80194.1| uncharacterized protein Dwil_GK10379 [Drosophila willistoni])

HSP 1 Score: 214.927 bits (546), Expect = 3.304e-70
Identity = 113/124 (91.13%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKVKGKAKSRSNRAGLQF           GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVKGKAKSRSNRAGLQFSVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|1105063696|emb|CRG62825.1| (histone H2A [Clunio marinus] >gi|1108464816|emb|CRL07053.1| CLUMA_CG019991, isoform A [Clunio marinus])

HSP 1 Score: 214.157 bits (544), Expect = 6.176e-70
Identity = 112/124 (90.32%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKVK KAKSRSNRAGLQFP          G+YAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVKSKAKSRSNRAGLQFPVGRIHRLLRKGDYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|1036070026|ref|XP_016938654.1| (PREDICTED: histone H2A-like [Drosophila suzukii])

HSP 1 Score: 213.772 bits (543), Expect = 8.125e-70
Identity = 112/124 (90.32%), Postives = 112/124 (90.32%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKV GKAKSRSNRAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK A
Sbjct:    1 MSGRGKGGKVNGKAKSRSNRAGLQFPVVRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKTA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|861629980|gb|KMQ89912.1| (histone h2a [Lasius niger])

HSP 1 Score: 213.001 bits (541), Expect = 1.733e-69
Identity = 112/124 (90.32%), Postives = 112/124 (90.32%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKVKGKAKSRSNR GLQFP          GNYAERVGAGAPV LAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVKGKAKSRSNRVGLQFPVDRIHRLLRKGNYAERVGAGAPVCLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|157137737|ref|XP_001657157.1| (histone H2A [Aedes aegypti] >gi|108880814|gb|EAT45039.1| AAEL003669-PA [Aedes aegypti])

HSP 1 Score: 212.231 bits (539), Expect = 4.214e-69
Identity = 110/124 (88.71%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGKGGKV+ KAK+RS+RAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKGGKVRAKAKTRSSRAGLQFPVGRTHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
[Close]
BLAST of GM13182 vs. nr
Match: gi|759055400|ref|XP_011336931.1| (PREDICTED: histone H2A [Ooceraea biroi] >gi|607361202|gb|EZA55495.1| Histone H2A [Ooceraea biroi])

HSP 1 Score: 211.46 bits (537), Expect = 7.295e-69
Identity = 111/124 (89.52%), Postives = 112/124 (90.32%), Query Frame = 0 
Query:    1 MSGRGKGGKVKGKAKSRSNRAGLQFP----------GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 114
            MSGRGK GK KGKAKSRS+RAGLQFP          GNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA
Sbjct:    1 MSGRGKTGKSKGKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKKA 124
The following BLAST results are available for this feature:
BLAST of GM13182 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 14
Match NameE-valueIdentityDescription
EMLSAG000000056412.298e-5180.56supercontig:LSalAtl2s:LSalAtl2s303:362466:370455:1... [more]
EMLSAG000000125112.828e-4984.76supercontig:LSalAtl2s:LSalAtl2s921:217466:218531:-... [more]
EMLSAG000000075611.258e-4892.68supercontig:LSalAtl2s:LSalAtl2s436:406900:407148:1... [more]
EMLSAG000000011081.017e-4785.32supercontig:LSalAtl2s:LSalAtl2s1185:74095:74469:1 ... [more]
EMLSAG000000081306.973e-4360.83supercontig:LSalAtl2s:LSalAtl2s484:362061:414899:-... [more]
EMLSAG000000035371.947e-4072.73supercontig:LSalAtl2s:LSalAtl2s193:353311:359396:-... [more]
EMLSAG000000088241.616e-3264.71supercontig:LSalAtl2s:LSalAtl2s54:205060:215917:-1... [more]
EMLSAG000000019814.289e-2745.00supercontig:LSalAtl2s:LSalAtl2s1352:73992:74474:1 ... [more]
EMLSAG000000110205.482e-2367.14supercontig:LSalAtl2s:LSalAtl2s741:230720:233818:-... [more]
EMLSAG000000125971.337e-2154.55supercontig:LSalAtl2s:LSalAtl2s944:131989:132225:-... [more]

Pages

back to top
BLAST of GM13182 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|122044770|sp|P02269.2|H2A_ASTRU5.503e-6885.48RecName: Full=Histone H2A[more]
gi|121987|sp|P16886.2|H2AL_STRPU1.312e-6583.74RecName: Full=Late histone H2A.L3[more]
gi|122004|sp|P02264.2|H2A_ONCMY2.370e-6582.93RecName: Full=Histone H2A[more]
gi|74733131|sp|Q9BTM1.1|H2AJ_HUMAN3.365e-6583.06RecName: Full=Histone H2A.J; Short=H2a/j >gi|12214... [more]
gi|75075512|sp|Q4R3X5.1|H2AJ_MACFA3.516e-6583.06RecName: Full=Histone H2A.J; Short=H2a/j[more]
gi|81878911|sp|Q8R1M2.1|H2AJ_MOUSE4.575e-6583.06RecName: Full=Histone H2A.J; Short=H2a/j >gi|20583... [more]
gi|82191289|sp|P70082.1|H2AJ_CHICK6.152e-6583.61RecName: Full=Histone H2A.J; Short=H2a/j; AltName:... [more]
gi|74750623|sp|Q8IUE6.3|H2A2B_HUMAN8.544e-6583.61RecName: Full=Histone H2A type 2-B[more]
gi|121966|sp|P06897.2|H2A1_XENLA9.226e-6581.97RecName: Full=Histone H2A type 1[more]
gi|74752099|sp|Q96QV6.3|H2A1A_HUMAN1.446e-6481.97RecName: Full=Histone H2A type 1-A; AltName: Full=... [more]

Pages

back to top
BLAST of GM13182 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1321329565|ref|XP_023307652.1|1.692e-7091.13histone H2A [Lucilia cuprina] >gi|1108464811|emb|C... [more]
gi|195371155|ref|XP_002045914.1|1.692e-7091.13GM13182 [Drosophila sechellia] >gi|194122083|gb|ED... [more]
gi|1036069662|ref|XP_016938452.1|2.275e-7091.13PREDICTED: histone H2A-like [Drosophila suzukii][more]
gi|194202619|gb|EDX16195.1|2.742e-7091.13GD12842 [Drosophila simulans][more]
gi|195442960|ref|XP_002069208.1|3.304e-7091.13histone H2A [Drosophila willistoni] >gi|194165293|... [more]
gi|1105063696|emb|CRG62825.1|6.176e-7090.32histone H2A [Clunio marinus] >gi|1108464816|emb|CR... [more]
gi|1036070026|ref|XP_016938654.1|8.125e-7090.32PREDICTED: histone H2A-like [Drosophila suzukii][more]
gi|861629980|gb|KMQ89912.1|1.733e-6990.32histone h2a [Lasius niger][more]
gi|157137737|ref|XP_001657157.1|4.214e-6988.71histone H2A [Aedes aegypti] >gi|108880814|gb|EAT45... [more]
gi|759055400|ref|XP_011336931.1|7.295e-6989.52PREDICTED: histone H2A [Ooceraea biroi] >gi|607361... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold172_size289735supercontigscaffold172_size289735:20874..21376 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:nucleosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold172_size289735-snap-gene-0.18-mRNA-1maker-scaffold172_size289735-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold172_size289735:20874..21376-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold172_size289735-snap-gene-0.18 ID=maker-scaffold172_size289735-snap-gene-0.18|Name=GM13182|organism=Tigriopus kingsejongensis|type=gene|length=503bp|location=Sequence derived from alignment at scaffold172_size289735:20874..21376- (Tigriopus kingsejongensis)
ATGTCCGGACGAGGCAAAGGAGGCAAAGTTAAGGGAAAGGCAAAGAGCCG
ATCTAACCGAGCTGGTCTCCAGTTCCCCGTGGGCCGAATCCATCGTCTCC
TCCGCAAGGGCAACTATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCATCGTCTCCTCCGCAAGGGCAACTATGCCGA
GCGTGTGGGAGCCGGAGCCCCCGTCTACTTGGCCGCCGTCATGGAGTACT
TGGCGGCTGAGGTCCTCGAGTTGGCCGGCAATGCTGCCCGTGACAACAAG
AAGACCCGCATCATCCCCCGTCACTTGCAATTGGCCATCCGTAATGACGA
GGAGCTGAACAAGCTGCTCTCGGGTGTGACCATTGCCCAAGGTGGTGTGC
TCCCCAACATCCAGGCCGTTCTTCTGCCCAAGAAGACCGAGAAGAAGGCC
TAA
back to top
Synonyms
The feature 'GM13182' has the following synonyms
Synonym
Tk06514
Add to Basket