mediator of rna polymerase ii transcription subunit 17-like, maker-scaffold175_size286436-snap-gene-1.49 (gene) Tigriopus kingsejongensis

Overview


Name	mediator of rna polymerase ii transcription subunit 17-like
Unique Name	maker-scaffold175_size286436-snap-gene-1.49
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. L. salmonis genes
Match: EMLSAG00000004958 (supercontig:LSalAtl2s:LSalAtl2s260:1298922:1302318:1 gene:EMLSAG00000004958 transcript:EMLSAT00000004958 description:"maker-LSalAtl2s260-augustus-gene-13.30")

HSP 1 Score: 527.709 bits (1358), Expect = 0.000e+0
Identity = 261/381 (68.50%), Postives = 305/381 (80.05%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCH--------------STGAEKKGPARAMQSQLV-----HSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKD-RKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGNNSVS 361
            +HWQKKLE AQNVLFC+ELF+QLAKEAIQL+A IPHMVVG QI ASLFTDIQLIISLCH              S  + K G   + Q Q       HSHVLEHSLHQLLR  H+RNINP+ P+LSSAP+G+SK+RR+AGP A DRQ+LLEMA   T+LE++I QAQHVVLRLRTMFVLDT+ R++KDPLI+CH  TLSSPT  SVKV IVTSGYDS+ +TQL I V E++LTVVCRDGRVL FSHEPQE RDFILCQI+QHQ+ GVQ+LAK  GWQV+SSSSNLG G VEP+G A G LLS+P GDRFI++R  P  QT+VWVSSAPCKD++P  VVKD +KWE LP+SF+E+RLD+MDGKNLL+KLELLMA+L  N  +S
Sbjct:  309 VHWQKKLEQAQNVLFCKELFAQLAKEAIQLKATIPHMVVGTQIIASLFTDIQLIISLCHSSSSDRSKRSMEETSKNSGKDGSNSSNQQQSSQSQKDHSHVLEHSLHQLLRQTHARNINPEGPSLSSAPVGVSKKRRIAGPSACDRQSLLEMAKHETILERVIAQAQHVVLRLRTMFVLDTIGRDMKDPLITCHWSTLSSPTCXSVKVMIVTSGYDSINKTQLFIKVEEKRLTVVCRDGRVLKFSHEPQELRDFILCQIAQHQVNGVQALAKVTGWQVISSSSNLGSGVVEPLGNAAGVLLSSPTGDRFISVRPSPITQTSVWVSSAPCKDYFPSAVVKDHKKWENLPESFKEVRLDRMDGKNLLSKLELLMAALVSNVGIS 689

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|74800788|sp|Q7PVZ2.2|MED17_ANOGA (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 419.468 bits (1077), Expect = 1.339e-141
Identity = 204/355 (57.46%), Postives = 264/355 (74.37%), Query Frame = 0

Query:    3 WQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQ--TTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            WQ+ LE AQNVLFC+ELF+QLA+EA+QLQAPIPH+VVG+QI A+L   IQLIISLCHST ++    +  ++    H HVLEHSLHQLLR  H +N +   P  +S PLG SK+R LAGP A DR  LLEM    TLLEQII QAQH+  R RT +VLDT+AR++KDP+I+ H   ++SPT + VK++I + GYD+  RT LVIHV ER L  +CRDGR++H S+EPQE RD ILCQISQHQI+ +Q+LAKCM WQ+LSSSS+LG G+VEP+G A+ C+L++P  DR IA++     Q    V+++ +P KDF+PG +V+ R WE L   F+E+R DKM+GKN  NK+E LMASL+
Sbjct:  291 WQQTLEYAQNVLFCKELFNQLAREAVQLQAPIPHVVVGNQIRATLLPGIQLIISLCHSTSSDSNNSSEPIKD---HDHVLEHSLHQLLREFHHKNTHHPFPHPASGPLGPSKKRMLAGPSAYDRHELLEMTKSQTLLEQIIAQAQHIFTRRRTQYVLDTVARDVKDPMITSHWNAMNSPTMSCVKINITSHGYDANLRTSLVIHVKERSLKCICRDGRIMHMSYEPQELRDLILCQISQHQIVCLQNLAKCMAWQILSSSSHLGIGSVEPLGNASSCVLASPNSDRLIAVQVRCDSQIDVKVFIAQSPAKDFFPGSLVQGRHWEHLGGHFKEVRFDKMEGKNFHNKMEFLMASLT 642

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|74947827|sp|Q9VEC1.1|MED17_DROME (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Mediator complex subunit 17; AltName: Full=dMED17; AltName: Full=dTRAP80)

HSP 1 Score: 416.001 bits (1068), Expect = 2.838e-140
Identity = 203/359 (56.55%), Postives = 264/359 (73.54%), Query Frame = 0

Query:    3 WQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIA--IRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGNNS 359
            WQK LE AQNVLFC+ELF+QLA+EAIQLQAPIPH+V+G+QI A+L  +IQLIISLCHST  +   PA        H HVLEHSLHQLLR  H +N +   P  +SAPLG +K+R LAGP AADR+ LL+M    T+LEQII QAQH+ +R RT +VLDT+AR++KDP I  H   ++SPT + VK++IVT GYD++ RT LVIHV ER L  +CRDGRV+  S+EPQE RD ILCQI+ HQI  + SLA+CM W VLS+S++LG G VEP+G A+ CLL++P  DR IA  IR  P     V+++ +P +DF+P  +V ++ WE L  +F+E+R DK++GK+ LNK+E LMASL+ N +
Sbjct:  288 WQKTLEFAQNVLFCKELFAQLAREAIQLQAPIPHVVIGNQIRATLLPNIQLIISLCHSTTFDSSQPAPIND----HDHVLEHSLHQLLREVHYKNSHHPFPHPASAPLGPTKKRMLAGPMAADRETLLDMTKSQTILEQIIAQAQHIFMRKRTQYVLDTLARDVKDPQIVSHWNAMNSPTMSCVKINIVTHGYDAIGRTSLVIHVKERSLKCICRDGRVMRLSYEPQELRDLILCQINSHQISCLISLARCMSWTVLSNSNHLGIGKVEPLGNASSCLLASPNSDRMIAVQIRCDPQIDVKVYIARSPRQDFFPSPLVPEKLWENLGGTFKEVRFDKIEGKSFLNKMEFLMASLTSNTA 642

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|121957331|sp|Q17JT4.1|MED17_AEDAE (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 414.461 bits (1064), Expect = 1.021e-139
Identity = 204/355 (57.46%), Postives = 262/355 (73.80%), Query Frame = 0

Query:    3 WQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQ--TTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            WQK L+ AQNVLFC+ELF+QLA+EA+QLQAPIPH+VVG+QI A+L   IQL+ISLCHST ++    +  ++    H HVLEHSLHQLLR  H +N +   P  +SAPLG SK+R LAGP A DR  LLEM    TLLEQII QAQH+  R R  +VLDT+ARE+KDP I+ H   ++SPT + VK++I + GYD+  RT LVIHV ER L  +CRDGR++H S+E QE RD IL QISQHQI+ +QSLAKCM WQ+LS+SS+LG G+VEP+G A+ C+L++P  DR IA++    PQ    V+++ +P KDF+PG +V+ R WE L   F+ELR DKM+GKN  NK+E LMASL+
Sbjct:  291 WQKTLDFAQNVLFCKELFNQLAREAVQLQAPIPHVVVGNQIRATLLPGIQLVISLCHSTSSDSNNSSEPIKD---HDHVLEHSLHQLLREFHHKNTHHPFPHPASAPLGPSKKRMLAGPSAFDRYELLEMTKSQTLLEQIIAQAQHIFTRRRAQYVLDTLAREVKDPQITSHWNAMNSPTMSCVKINITSHGYDANLRTSLVIHVKERSLKCICRDGRIMHMSYEMQELRDLILYQISQHQIVCLQSLAKCMAWQILSNSSHLGIGSVEPLGNASSCVLASPNSDRLIAVQVRCDPQLDVKVYIAQSPGKDFFPGSLVQGRHWEHLGGHFKELRFDKMEGKNFHNKMEFLMASLT 642

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|82081099|sp|Q5ZID1.1|MED17_CHICK (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 304.294 bits (778), Expect = 7.931e-97
Identity = 159/359 (44.29%), Postives = 239/359 (66.57%), Query Frame = 0

Query:    2 HWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEK-KGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDA-PALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            HWQ KLE AQNVL C+E+F+QL++EA+Q+++ IPH+VV +QI +  F  +QL ISLCHS+  +K +  A   Q+   H +VLEH+LHQL+R  H + ++    P  +SAP G  KR RLAGP+A D+  +  +     LLE+II+QA+H+ LR RT   +D++A  ++DP I  H   ++    +SVKV I + GY+ + ++ QL +++G  Q+ VV RDGRV+  SH+ QE +DF+L Q+SQHQ+  VQ LAK MGW VLS S+++G G VE +G A+   +++P GD  I++R+ P   + V V    + CKD   G V++D KW  L   F+E++ +KM+G+N + K+ELLMA+L+
Sbjct:  284 HWQTKLETAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPGLQLSISLCHSSNDKKSQKSASEKQNPEGHLYVLEHNLHQLIRECHKQTLSSVVMPHPASAPFG-HKRMRLAGPQAFDKNEISSLQTNEGLLEKIIKQAKHIFLRRRTARTIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITVASPNGDYAISVRNGPESGSKVMVQFPRSQCKDLPKGDVLQDNKWNHLRGPFKEVQWNKMEGRNFVYKMELLMAALT 641

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|123885985|sp|Q0VFR9.1|MED17_XENTR (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 303.523 bits (776), Expect = 1.294e-96
Identity = 159/360 (44.17%), Postives = 244/360 (67.78%), Query Frame = 0

Query:    2 HWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEK--KGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNI-NPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            HWQ +LEAAQNVL C+E+F+QL++EA+Q+++ IPH+VV +QI +  F  +QL ISLCHS+  +K  K  +  M ++  H +VLEH+LHQL+R  H + + N   P  +SAP G  KR RLAGP+A D+  +  M     LLE+II+QA+H+ LR RT   +D++A  ++DP I  H  +++    +SVKV I + GY+ + ++ QL +++G  Q+ VV RDGRV+  SH+ QE +DF+L Q+SQHQ++ VQ LAK MGW VLS ++++G G VE +G A+   +++P GD  I++R+ P   T V V    + CKD   G V+++ KW+ L   ++E++ +KM+G+N + K+ELLMA+L+
Sbjct:  280 HWQTRLEAAQNVLLCKEVFAQLSREAVQIKSQIPHIVVKNQIISQPFPGLQLSISLCHSSNDKKSQKSNSDKMGAE-DHLYVLEHNLHQLIREFHKQTLSNIVMPHPASAPFG-HKRMRLAGPQAFDKNEMGFMQQNEGLLEKIIKQAKHIFLRRRTARTIDSLASRIEDPQIQAHWSSINDVYESSVKVLITSQGYEQICKSIQLQLNIGVDQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVLAVQQLAKVMGWHVLSFTNHVGLGQVESVGNASSITVTSPNGDYAISVRNGPESGTKVMVQFPRSQCKDLPKGDVLQENKWQYLRGPYKEVQWNKMEGRNFVYKMELLMAALT 637

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|75057775|sp|Q5BIR6.1|MED17_BOVIN (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 303.138 bits (775), Expect = 2.694e-96
Identity = 160/360 (44.44%), Postives = 239/360 (66.39%), Query Frame = 0

Query:    2 HWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSH--VLEHSLHQLLRLRHSRNINPDA-PALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            HWQ KLEAAQNVL C+E+F+QL++EA+Q+++ IPH+VV +QI +  F  +QL ISLCHS+  +KK P  A + Q    H  VLEH+LH L+R  H + ++    P  +SAP G  KR RL+GP+A D+  +  + +   LLE+II+QA+H+ LR RT   +D++A  ++DP I  H   ++    +SVKV I + GY+ + ++ QL +++G  Q+ VV RDGRV+  SHE QE +DF+L Q+SQHQ+  VQ LAK MGWQVLS S+++G G VE +G A+   +++P GD  I++R+ P   + + V      CKD     V++D KW  L   F+E++ +KM+G+N + K+ELLM++LS
Sbjct:  290 HWQTKLEAAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPSLQLSISLCHSSN-DKKSPKSATEKQSPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFG-HKRMRLSGPQAFDKNEINSIQSSEGLLEKIIKQAKHIFLRSRTAATIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSHEGQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPVESIGNASAITVASPNGDYAISVRNGPESGSKIMVQFPRNQCKDLPKSDVLQDSKWNHLRGPFKEVQWNKMEGRNFVYKMELLMSALS 647

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|81879228|sp|Q8VCD5.1|MED17_MOUSE (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17; AltName: Full=Thyroid hormone receptor-associated protein complex 80 kDa component)

HSP 1 Score: 297.745 bits (761), Expect = 3.177e-94
Identity = 156/359 (43.45%), Postives = 239/359 (66.57%), Query Frame = 0

Query:    2 HWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQ-SQLVHSHVLEHSLHQLLRLRHSRNINPDA-PALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            HWQ KLEAAQNVL C+E+F+QL++EA+Q+++ IPH+VV +QI +  F  +QL ISLCHS+  +K     A +  Q  H +VLEH+LH L+R  H + ++    P  +SAP G  KR RL+GP+A D+  +  + +   LLE+II+QA+H+ LR RT   +D++A  ++DP I  H   ++    +SVKV I + GY+ + ++ QL +++G  Q+ VV RDGRV+  SH+ QE +DF+L Q+SQHQ+  VQ LAK MGWQVLS S+++G G +E +G A+   +++P+GD  I++R+ P   + + V      CKD     V++D KW  L   F+E++ +KM+G+N + K+ELLM++LS
Sbjct:  288 HWQTKLEAAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPSLQLSISLCHSSDDKKSQKCAAEKPGQEDHLYVLEHNLHLLIREFHKQTLSSIVMPHPASAPFG-HKRMRLSGPQAFDKNEINSIQSTEGLLEKIIKQAKHIFLRSRTAATIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQVRVVHRDGRVIMLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAISVRNGPESGSKIMVQFPRNQCKDLPKSDVLQDSKWSHLRGPFKEVQWNKMEGRNFVYKMELLMSALS 645

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|296437366|sp|Q9NVC6.2|MED17_HUMAN (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Activator-recruited cofactor 77 kDa component; Short=ARC77; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17; AltName: Full=Thyroid hormone receptor-associated protein complex 80 kDa component; Short=Trap80; AltName: Full=Transcriptional coactivator CRSP77; AltName: Full=Vitamin D3 receptor-interacting protein complex 80 kDa component; Short=DRIP80)

HSP 1 Score: 293.893 bits (751), Expect = 9.219e-93
Identity = 154/360 (42.78%), Postives = 238/360 (66.11%), Query Frame = 0

Query:    2 HWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSH--VLEHSLHQLLRLRHSRNINPDA-PALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            HWQ KLEAAQNVL C+E+F+QL++EA+Q+++ +PH+VV +QI +  F  +QL ISLCHS+  +KK    A + Q    H  VLEH+LH L+R  H + ++    P  +SAP G  KR RL+GP+A D+  +  + +   LLE+II+QA+H+ LR R    +D++A  ++DP I  H   ++    +SVKV I + GY+ + ++ QL +++G  Q+ VV RDGRV+  S++ QE +DF+L Q+SQHQ+  VQ LAK MGWQVLS S+++G G +E +G A+   +++P+GD  I++R+ P   + + V      CKD     V++D KW  L   F+E++ +KM+G+N + K+ELLM++LS
Sbjct:  290 HWQTKLEAAQNVLLCKEIFAQLSREAVQIKSQVPHIVVKNQIISQPFPSLQLSISLCHSSN-DKKSQKFATEKQCPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFG-HKRMRLSGPQAFDKNEINSLQSSEGLLEKIIKQAKHIFLRSRAAATIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSYQEQELQDFLLSQMSQHQVHAVQQLAKVMGWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAISVRNGPESGSKIMVQFPRNQCKDLPKSDVLQDNKWSHLRGPFKEVQWNKMEGRNFVYKMELLMSALS 647

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BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Match: gi|123884354|sp|Q08BY1.1|MED17_DANRE (RecName: Full=Mediator of RNA polymerase II transcription subunit 17; AltName: Full=Cofactor required for Sp1 transcriptional activation subunit 6; Short=CRSP complex subunit 6; AltName: Full=Mediator complex subunit 17)

HSP 1 Score: 285.034 bits (728), Expect = 1.794e-89
Identity = 154/358 (43.02%), Postives = 235/358 (65.64%), Query Frame = 0

Query:    3 WQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQ-LVHSHVLEHSLHQLLRLRHSRNINPDA-PALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRT-QLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVS--SAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            W  +LEAAQNVL C+E+F+QL++EA+Q+++ IPH+VV +QI +  F  +QL ISLCHSTG +K   +   +S+   H +VLEH+LHQL+R  H + ++    P  +SAP G  KR RLAGP A D+  +  +     LLE+II+QA+H+ LR RT   +D++A  ++DP I  H   ++    +SVKV I + GY+ + ++ QL +++   Q+ VV RDGRV+  SH+ QE +DF+L Q+SQHQ+  VQ LAK MGW VLS S+++G G++E +G A+   +++P+G+  I++R+ P     V V    +  KD      V+D KW QL  + +E+  D+M+GKN + K+ELLMA+L+
Sbjct:  284 WHSRLEAAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPGLQLSISLCHSTGEKKSQRSSPDKSKPDDHLYVLEHNLHQLIREFHKQTLSSVVMPHPASAPFG-HKRLRLAGPLAYDKAEISSLQQTEGLLEKIIKQAKHIFLRSRTARTIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNICVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGSIESIGNASSITVASPSGEYAISVRNGPESGCKVLVQFPRSQAKDAGRSDAVQDGKWTQLRGAHREVHWDRMEGKNFVYKMELLMAALT 640

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|1325262914|ref|XP_023333076.1| (mediator of RNA polymerase II transcription subunit 17-like [Eurytemora affinis])

HSP 1 Score: 489.96 bits (1260), Expect = 6.393e-167
Identity = 239/356 (67.13%), Postives = 286/356 (80.34%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAE-KKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            MHW+ KLEAAQNVLFC+ELFSQLA+EA+QLQAPIPHMVVG QI AS+F DIQL ISLCHST  E KK       S+  HS VLEHSL QLLR   + NINPD P+LSSAP+GI ++RR AGP +ADR +LLEM +  TLLEQI++QAQHVVLRLRT+FVLDT+ARE KDPLI+ H  TLSSPT +SVKVSIV++GYD++ +TQLVIHVGE+   V+C+DGRVL+FS+EPQE RDFILCQ++QHQI GVQ+LAK MGWQVLSSSS LG GAVEP G A GC+L N  G RF+A+RH P    +V++  AP  + +   +V+D KWE LP  F+E++LDKMDGKNLL KLELLMA+LS
Sbjct:  279 MHWKNKLEAAQNVLFCKELFSQLAREAVQLQAPIPHMVVGSQIIASVFPDIQLTISLCHSTAGEGKKNSGTTPPSRNDHSDVLEHSLFQLLRKVQASNINPDGPSLSSAPIGIPRKRRAAGPESADRHSLLEMTSTETLLEQIVRQAQHVVLRLRTIFVLDTLAREFKDPLITSHWSTLSSPTCSSVKVSIVSAGYDTINKTQLVIHVGEKMQRVICKDGRVLNFSYEPQELRDFILCQLAQHQISGVQNLAKVMGWQVLSSSSFLGGGAVEPFGSAAGCMLGNSRGTRFLAVRHSPQSNYSVYMGQAPAGEQH-SSIVQDNKWENLPSPFKEVKLDKMDGKNLLGKLELLMAALS 633

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|954548556|ref|XP_014616863.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Polistes canadensis])

HSP 1 Score: 469.159 bits (1206), Expect = 1.490e-158
Identity = 226/358 (63.13%), Postives = 279/358 (77.93%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGNN 358
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEMA   TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYDS++RT L++HVGE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQSLAKCMGWQ+L +SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ ++
Sbjct:  291 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PTAPPPHKTDHDHVLEHSLHQLLREIHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMAKSQTLLEQIIQQAQHFFMRLRTEYVLDTIAKEVKDPLIVSHWMALNSPTQSCVKINILTHGYDSLYRTSLIVHVGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQSLAKCMGWQLLGNSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGIQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSSS 647

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|972202286|ref|XP_015183256.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Polistes dominula])

HSP 1 Score: 469.159 bits (1206), Expect = 1.523e-158
Identity = 226/358 (63.13%), Postives = 279/358 (77.93%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGNN 358
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEMA   TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYDS++RT L++HVGE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQSLAKCMGWQ+L +SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ ++
Sbjct:  291 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PTAPPPHKTDHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMAKSQTLLEQIIQQAQHFFMRLRTEYVLDTIAKEVKDPLIVSHWMALNSPTQSCVKINILTHGYDSLYRTSLIVHVGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQSLAKCMGWQLLGNSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGIQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSSS 647

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|383847603|ref|XP_003699442.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Megachile rotundata])

HSP 1 Score: 466.848 bits (1200), Expect = 1.155e-157
Identity = 227/357 (63.59%), Postives = 277/357 (77.59%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGN 357
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG EKK PA     ++ H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEM    TLLEQIIQQAQH  +R RT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYD++ RT LV+HVGER L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQSLAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ +
Sbjct:  289 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNEKK-PAVPPPHKIDHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTLLEQIIQQAQHFFMRRRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINILTHGYDTVCRTSLVVHVGERSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQSLAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSS 644

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|817061948|ref|XP_012252603.1| (mediator of RNA polymerase II transcription subunit 17 [Athalia rosae])

HSP 1 Score: 466.463 bits (1199), Expect = 1.797e-157
Identity = 226/355 (63.66%), Postives = 276/355 (77.75%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P+     +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEM    TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYDS+ RT LV+HVGE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQ+LAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +VK+RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+
Sbjct:  298 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PSAPPPHKTEHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPNAADRYELLEMTKSQTLLEQIIQQAQHFFMRLRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINILTHGYDSVCRTSLVVHVGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVGIAHSPRKDFFPGQLVKERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLT 651

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|66507375|ref|XP_394516.2| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Apis mellifera] >gi|1035588487|ref|XP_016915832.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Apis cerana])

HSP 1 Score: 466.077 bits (1198), Expect = 2.077e-157
Identity = 223/357 (62.46%), Postives = 277/357 (77.59%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGN 357
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEM    TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYD+++RT LV+H+GE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQ+LAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ +
Sbjct:  289 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PTAPPPHKSEHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTLLEQIIQQAQHYFMRLRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINILTHGYDTVYRTSLVVHIGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSS 644

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|1241836828|gb|PBC33081.1| (Mediator of RNA polymerase II transcription subunit [Apis cerana cerana])

HSP 1 Score: 466.077 bits (1198), Expect = 2.190e-157
Identity = 223/357 (62.46%), Postives = 277/357 (77.59%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGN 357
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEM    TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYD+++RT LV+H+GE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQ+LAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ +
Sbjct:  290 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PTAPPPHKSEHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTLLEQIIQQAQHYFMRLRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINILTHGYDTVYRTSLVVHIGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSS 645

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|820834434|ref|XP_012345808.1| (PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 17 [Apis florea])

HSP 1 Score: 466.077 bits (1198), Expect = 2.341e-157
Identity = 223/355 (62.82%), Postives = 276/355 (77.75%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLS 355
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  LLEM    TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYD+++RT LV+H+GE+ L  VCRDGRV+H S+EPQE RD I CQI QHQI  VQ+LAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+
Sbjct:  289 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKK-PTAPPPHKSEHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELLEMTKSQTLLEQIIQQAQHYFMRLRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINILTHGYDTVYRTSLVVHIGEKSLKCVCRDGRVMHMSYEPQELRDLIFCQIYQHQITAVQALAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVAIAHSPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLT 642

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|970881848|ref|XP_015119138.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Diachasma alloeum])

HSP 1 Score: 466.077 bits (1198), Expect = 2.392e-157
Identity = 225/357 (63.03%), Postives = 278/357 (77.87%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGN 357
            MHWQ+KLEAAQNVLFC+ELFSQLA+EA+ L+APIPHMVVG+QI A++   IQLII LCHSTG +KK      +S   H HVLEHSLHQLLR  H +N +   P  SS PLG SKRR LAGP AADR  L+EM    TLLEQIIQQAQH  +R+RT +VLDT+A+E+KDPLI  H   L+SPT++SVK+SI T+GYD++ RT LV+HVGE+ L  VC+DGRV+H S+EPQE RD I+CQI QHQI  VQSLAKCMGWQ L++SS+LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ AP KDF+PG +V++RKWE L  SF+E+R DKM+GKN LNK+ELLMASL+ +
Sbjct:  290 MHWQQKLEAAQNVLFCKELFSQLAREAVHLRAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGNDKKASPPPHKSD--HDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKRRCLAGPTAADRYELIEMTKSQTLLEQIIQQAQHFFMRIRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSSVKISIWTNGYDAVCRTSLVVHVGEKSLKCVCKDGRVMHMSYEPQELRDLIVCQIHQHQISAVQSLAKCMGWQFLANSSHLGLGAVEPLGNASSCILASPIGDRMIAVRCEPQTGVQVAIAHAPRKDFFPGQLVRERKWENLGGSFKEVRWDKMEGKNFLNKMELLMASLTSS 644

[Close]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Match: gi|1227995480|ref|XP_021929539.1| (mediator of RNA polymerase II transcription subunit 17 isoform X1 [Zootermopsis nevadensis] >gi|646707748|gb|KDR14366.1| Mediator of RNA polymerase II transcription subunit 17 [Zootermopsis nevadensis])

HSP 1 Score: 465.307 bits (1196), Expect = 4.086e-157
Identity = 223/357 (62.46%), Postives = 277/357 (77.59%), Query Frame = 0

Query:    1 MHWQKKLEAAQNVLFCQELFSQLAKEAIQLQAPIPHMVVGHQISASLFTDIQLIISLCHSTGAEKKGPARAMQSQLVHSHVLEHSLHQLLRLRHSRNINPDAPALSSAPLGISKRRRLAGPRAADRQALLEMAAQPTLLEQIIQQAQHVVLRLRTMFVLDTMARELKDPLISCHLGTLSSPTRTSVKVSIVTSGYDSMFRTQLVIHVGERQLTVVCRDGRVLHFSHEPQEFRDFILCQISQHQIIGVQSLAKCMGWQVLSSSSNLGCGAVEPMGGATGCLLSNPAGDRFIAIRHIPPPQTTVWVSSAPCKDFYPGGVVKDRKWEQLPDSFQELRLDKMDGKNLLNKLELLMASLSGN 357
            +HWQ+KLEAAQNVLFC+ELF+QLAKEA+QLQAPIPHMVVG+QI A++   IQLII LCHSTG +KK P      +  H HVLEHSLHQLLR  H +N +   P  SS PLG SK+R LAGP AADR  LLEM    TLLEQIIQQAQH  +RLRT +VLDT+A+E+KDPLI  H   L+SPT++ VK++I+T GYDS++RT LV+HVGE+ L  VCRDGRV+H S+EPQE RD + CQI QHQI  VQ LAKCMGWQ L++S++LG GAVEP+G A+ C+L++P GDR IA+R  P     V ++ +P KDF+PG +VK+RKWE L  SF+E+R DKM+GKN LNK+ELLM+SL+ +
Sbjct:  286 VHWQQKLEAAQNVLFCKELFNQLAKEAVQLQAPIPHMVVGNQIMATVLPGIQLIIGLCHSTGTDKK-PNLTPPQKSEHDHVLEHSLHQLLREVHHKNTHHPFPHPSSGPLGPSKKRCLAGPMAADRYELLEMTKSQTLLEQIIQQAQHFFMRLRTEYVLDTIAKEVKDPLIVSHWNALNSPTQSCVKINIMTHGYDSVYRTPLVVHVGEKALKCVCRDGRVMHMSYEPQELRDLVFCQIYQHQITAVQGLAKCMGWQYLANSTHLGLGAVEPLGNASSCILASPIGDRIIAVRCEPQTGVQVAIAQSPRKDFFPGQLVKERKWENLGGSFKEVRWDKMEGKNFLNKMELLMSSLTSS 641

The following BLAST results are available for this feature:

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. L. salmonis genes
BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000004958	0.000e+0	68.50	supercontig:LSalAtl2s:LSalAtl2s260:1298922:1302318...	[more]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 9


Match Name	E-value	Identity	Description
gi\|74800788\|sp\|Q7PVZ2.2\|MED17_ANOGA	1.339e-141	57.46	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|74947827\|sp\|Q9VEC1.1\|MED17_DROME	2.838e-140	56.55	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|121957331\|sp\|Q17JT4.1\|MED17_AEDAE	1.021e-139	57.46	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|82081099\|sp\|Q5ZID1.1\|MED17_CHICK	7.931e-97	44.29	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|123885985\|sp\|Q0VFR9.1\|MED17_XENTR	1.294e-96	44.17	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|75057775\|sp\|Q5BIR6.1\|MED17_BOVIN	2.694e-96	44.44	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|81879228\|sp\|Q8VCD5.1\|MED17_MOUSE	3.177e-94	43.45	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|296437366\|sp\|Q9NVC6.2\|MED17_HUMAN	9.219e-93	42.78	RecName: Full=Mediator of RNA polymerase II transc...	[more]
gi\|123884354\|sp\|Q08BY1.1\|MED17_DANRE	1.794e-89	43.02	RecName: Full=Mediator of RNA polymerase II transc...	[more]

BLAST of mediator of rna polymerase ii transcription subunit 17-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325262914\|ref\|XP_023333076.1\|	6.393e-167	67.13	mediator of RNA polymerase II transcription subuni...	[more]
gi\|954548556\|ref\|XP_014616863.1\|	1.490e-158	63.13	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
gi\|972202286\|ref\|XP_015183256.1\|	1.523e-158	63.13	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
gi\|383847603\|ref\|XP_003699442.1\|	1.155e-157	63.59	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
gi\|817061948\|ref\|XP_012252603.1\|	1.797e-157	63.66	mediator of RNA polymerase II transcription subuni...	[more]
gi\|66507375\|ref\|XP_394516.2\|	2.077e-157	62.46	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
gi\|1241836828\|gb\|PBC33081.1\|	2.190e-157	62.46	Mediator of RNA polymerase II transcription subuni...	[more]
gi\|820834434\|ref\|XP_012345808.1\|	2.341e-157	62.82	PREDICTED: LOW QUALITY PROTEIN: mediator of RNA po...	[more]
gi\|970881848\|ref\|XP_015119138.1\|	2.392e-157	63.03	PREDICTED: mediator of RNA polymerase II transcrip...	[more]
gi\|1227995480\|ref\|XP_021929539.1\|	4.086e-157	62.46	mediator of RNA polymerase II transcription subuni...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold175_size286436	supercontig	scaffold175_size286436:180716..184346 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold175_size286436-snap-gene-1.49-mRNA-1	maker-scaffold175_size286436-snap-gene-1.49-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold175_size286436:180716..184346+

gene from alignment at scaffold175_size286436:180716..184346+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold175_size286436-snap-gene-1.49 ID=maker-scaffold175_size286436-snap-gene-1.49|Name=mediator of rna polymerase ii transcription subunit 17-like|organism=Tigriopus kingsejongensis|type=gene|length=3631bp|location=Sequence derived from alignment at scaffold175_size286436:180716..184346+ (Tigriopus kingsejongensis)
ATGCATTGGCAGAAGAAGCTGGAGGCGGCTCAGAACGTGCTCTTCTGCCA
GGAGCTCTTCTCCCAGCTGGCCAAGGAGGCCATTCAGCTCCAGGCGCCCA
TTCCGCACATGGTGGTGGGCCATCAGATCTCGGCCAGCCTCTTCACCGAC
ATCCAGCTCATCATCTCGCTCTGCCACTCGACCGGGGCCGAGAAGAAGGG
GCCGGCCCGGGCCATGCAGTCCCAGTTGGTCCACTCCCACGTGCTCGAGC
ACTCCCTCCACCAGCTCCTTCGCCTCCGGCACAGTCGCAATATCAACCCG
GACGCGCCCGCCCTCAGCTCGGCCCCCTTGGGCATCTCCAAGCGCCGCCG
ATTGGCTGGACCGCGGGCCGCGGATCGCCAGGCCTTGCTCGAGATGGCCG
CCCAGCCCACACTGTTGGAACAGATCATTCAGCAGGCCCAGCATGTGGTG
CTCCGACTGAGGACCATGTTCGTCCTGGATACCATGGCCCGGGAGCTCAA
GGACCCGCTCATCTCGTGCCACTTGGGCACCCTGAGCTCGCCCACCCGCA
CCTCGGTCAAGGTGAGCATCGTGACCTCGGGCTACGACTCCATGTTCCGC
ACTCAGCTCGTGATCCATGTGGGTGAGCGACAACTCACTGTCGTGTGTCG
GGACGGACGCGTGCTTCACTTCAGCCACGAGCCCCAAGAGTTCCGCGACT
TTATCCTCTGTCAGATCTCGCAGCATCAGGTACGCCAAACCATTTGATGT
CTAATACTCTGCTCTCCCAAGTGCCAGCACGAGACTTGGAAATCTTTCTG
GCATATTATTTTCTCTGGATCCTGTTAGTCGCTTTAGGACTCCTCTTAGT
CAGCCCAAGGGTTTGCTATAAAGACATGGTCGAATGGTAGCCTCCAAGAT
GTAGGCTGTGTTGAGTATGATCCTGAATCCTGAAGGGGACGCAAGCTAAT
GCAACAGAGGAAGGTTCGAAATTGTCATCCCCAGAATGAAATATAGCTCA
GTGTCAGCGAGCGCTGCACTGGTACTGAGTGGCCGGGGTTCGATCCCCGG
GCTGCCCCAGTTCACGGCCACTAGTGGTGTTCATTCACAGCTATTGTTGG
CTTCTTTGGCGGGATTAAAGTGGACGGACCTGTGGTCATTTCTCGAGGGC
AAGGTAAAATAATCCATGATAAATTGGCCAAGCTGGCTGACTATGCCTCA
ACAGAGATGTCCTAGCTGGACAGAAATGTCACAAGAGCTAATTGGAATGA
ACCCTTACATAGGCAGAGTCCAAGTCACTCGTTTTGCAGCATTCTTGCTA
TAGATCAATTAAAAAGTAGCTCTTTTATCTGCATGCATCCTATGTACGGT
GAATTGCACTACAACTACGAATCTACGCTGTAGTCGTGGTTGTTGAAAAC
TCAACATTCACTCGGCATCAAAGCCAATCGTGCTCGAATCGCCTTGAAAA
TCACTATGAGTTCCCGCTTGACAGTTATTTTTTGATTTTTGGGCACCCTC
AAGTTTCAACAGGTTTATTCATCAAAACCTTAAAAAATCTCCAACAAGTG
TCACTTGTCCCCAACGCCGAAGAAATCATCTGGATTTCAATCTTAAAGCG
AACTGACGTTATCCCAGGTGGATGAGTTCATGATTAAAGCTGAAACCTGT
TTTCATGCAAGCCTGAAGCCGACTTACTTTTCCTGCTAAGTGGCAAGTTG
CCAATAAGAAAGTGAACACAAGGGGGCTTCCACGCCTTCAGACTGATAAT
TTGCCACCTATTCGACAAAATTTGATTTAAATATTCAAGGTGAATTGGTG
CATAATTCCTTGCCCGTTGAGCATACCAGTAGATGGAAGAGCTTCTGGGG
ACAAAGGTGTTCAATGCCACTTGGATCGTCCGAGTGGACAAATTCAGGAT
TTTGAACAAATTCCCAGGAAATACGAGGTGGTTGTGGCTCAGGGCTCTTT
TGTGTAATTTATAAGTTGTTTATACATGTAGTTGTTTATACGGTAGTTGC
AGTTGAAAGGAGGTGCCAAAAATCGTTTGCGGTCCTTTTAGAAGGGGGTA
GAAATAATCGCTGATCATTTAGTTCCTTCTTCAAAGCGCTACACGTGTCG
GTTTGGAATGCTACCCAGAAAGGCGAGGTTCCCTTGAAGGCTAAGAATGT
TGACAATGTTCTCTTGGGAATACTCGATTTCTAGACTCCCTAGATTTCTC
ACTCATGTTTGTTGCCCCCGTGAGTATTTGTCAGGCGGGTATTAAATTAT
GCCGAGACGTCTGAAAAGGTTTAAGGAAACGCGAGAGTCGAATAAAAAAA
CAACAATCTGTTCCAATTAATGAGAATCGAATGTTGACCCGTCATGAGCA
AAATAAACTGAGTATGGAATGAAACGATGTCGAAATCTTAGGACAATATG
CATAGAAATCTGGCATTTAAAGCCAAAACGAACCTGAGCCTACATACATG
TATTGTCCGAGGGGACGGTAAAATCCAAGGGACTTTCTTGGGCACTCTCA
GTTTAAAATAAAACGAAAATGTGTTATAAATTCCAAAAATGTTTGAAAAA
AATACAGCCCAATACTTCTAACCTCTGCCCATAACTAGATCCTGTATCCA
CAAGTTAAAAGGCAAGCAGCGTAGCGCAATGGTAGAGTGGCACAATCAGT
CATTTATCATTGCGTTATCCGAGGGTCGTTGGTTCGATCCCCGGGCTTGC
CAAGTTCCGGCAACTAGTGGTGTTAACTCACAGCTATTGTTTTCTTCCCT
GGCGGGATTAAAGTGGGCGTACCTGTGGTCATTCCTCGAGGGTAAGGTAA
TAATTCATGATAAATTTGACCGCCAGGCTGACTATGTCTCCTCGGAGATT
TCCCTAGCTGGGCAGAAATGCCCGGGGCCTTCCAAACAAACAAACCACAA
GTTAAAACACTGTCGCGACTTGAACATCCAGTTATGGGCATGTTGTGATG
CACCAAGCTCGAATGTTGTGATGCTCCAAAGTTAAAAAAAAATGATCACA
ACCAGGGAAGAAATGCTAAAGGTATCGCTCGATATTTGGCTACTTCAAGG
TTCAATTGAAACATTGCCTGCGAAGATTGTCGAATTTGGGCCTTTTTAAA
CTTCCCTAGTTAACTTACTTTCAGCCCGAAAGTAAGGTTTGAGCCCCTTT
TTGAACATTGCTGTTAAAGAATACAGCTTGCATCCGATCCCTAATGTATG
TTTCGTTTCCCCACGATAGATCATTGGTGTCCAATCCCTGGCCAAATGCA
TGGGCTGGCAAGTGCTCTCCTCCTCAAGCAACTTGGGTTGTGGCGCAGTC
GAGCCCATGGGTGGAGCCACGGGCTGCTTGCTCTCGAATCCGGCTGGGGA
TCGCTTCATCGCCATCCGGCACATTCCACCCCCCCAGACCACGGTGTGGG
TGTCCTCGGCCCCCTGCAAGGACTTCTATCCCGGGGGCGTGGTGAAGGAC
CGCAAGTGGGAGCAACTGCCGGACTCCTTCCAAGAGCTCCGCCTGGACAA
GATGGACGGGAAGAATCTGCTTAACAAGCTAGAGCTCCTCATGGCCTCGC
TCTCGGGCAACAACTCCGTGAGCAACACTCCCCTCAGTGTGAGCGAGGAT
GCGAGTTTTCTATGATTGTGCGCATAAACTG

Synonyms

The feature 'mediator of rna polymerase ii transcription subunit 17-like' has the following synonyms


Synonym
Tk09285

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