hypothetical protein DAPPUDRAFT_107621, maker-scaffold186_size273091-snap-gene-1.40 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. L. salmonis genes
Match: EMLSAG00000008007 (supercontig:LSalAtl2s:LSalAtl2s475:400715:402705:-1 gene:EMLSAG00000008007 transcript:EMLSAT00000008007 description:"maker-LSalAtl2s475-augustus-gene-4.23") HSP 1 Score: 50.8322 bits (120), Expect = 6.034e-7 Identity = 63/241 (26.14%), Postives = 105/241 (43.57%), Query Frame = 0 Query: 194 AHILKFMNRLRILALPKQCDDDVASIVGINCPKLESIVLTGTNLTNVGLSWFLCCRKLHTIILQGFFQGVSPKGVALLLNGLPGLRHVIY-DVMSDVLTYI-DFNTC--EAV--FPQFGLKTMLFHSMELLSSNHLELVTKLCPQIEWLSL------------DSALFYNLEGLGLLPHLRLFRLNYKSRPIDQTVVDFVSLNCHNITTLHLLEVKDLSLEDLNLSIGQCLNLETLVLCDC 416 L+F+ +L I ++ VG CP L + + +++ + LSW CRKL + L Q VSP G A +L P L+ + + VLT I D N+ ++V P+F L + S E +++ L + + CP+++ L + +S+ L GL L +RL N+ S Q F+ + + + L V +L++ + CLNLE L C Sbjct: 171 GEFLRFLPKL-IRITVSNVSNNFFQAVGKYCPNLILLKVHSSDIGDRVLSWLSKCRKLQYVELYE-NQNVSPVGYAQMLRSNPQLKSLGRCECFGSVLTTIFDDNSIYRKSVVNVPEF-LNLVEIDSSERIATKELMFLIQNCPKVKKLRIKYYPDDYRFDEKESSYLSALIGLDQLTDIRLIGANFYSHLFFQ----FIYIQGWQLLRMELTSVDELNINAIKTMGEHCLNLEVLSFTCC 404
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. nr
Match: gi|321464765|gb|EFX75771.1| (hypothetical protein DAPPUDRAFT_107621 [Daphnia pulex]) HSP 1 Score: 268.855 bits (686), Expect = 1.805e-79 Identity = 161/465 (34.62%), Postives = 255/465 (54.84%), Query Frame = 0 Query: 108 VPGHLYEQFLDNVLSALEVAGHYNHNGKQLMQYIILFFPKHTRRFRAQRYADRVLMPTVSCLMKCCQIEELYLEKADSPAITTYLLAHILKFMNRLRILALPKQCDDDVASIVGINCPKLESIVLTGTNLTNVGLSWFLCCRKLHTIILQGFFQGVSPKGVALLLNGLPGLRHVIYDVMSDVLTYIDFNTCEAVFPQFGLKTMLFHSMELLSSNHLELVTKLCPQIEWLSLDSALFYNLEGLGLLPHLRLFRLNYKSRPIDQTVVDFVSLNCHNITTLHLLEVKDLSLEDLNLSIGQCLNLETLVLCDCSIKP-DWDQPVRYNRQNPLSTSVDHLQLFSLQIFPCQLVKFIGLFRDLQVLETDRCELDLNQIKCVLLDQRELHTFRCTQWT-----HTSAQNLT------------NLQMAFRNCKLQMDRQEFAFEEDHMQTMTATLLSDYVGFSPLINFDTIS 554 +P +L + F+ +L+ ++V + G+QL+ Y+ F P++ + ++V + + L C + ELY+E+AD IT +L HILK++ RL++LALPKQC+D V ++VG NCP LESIVL T +TN G++W LCCR+LHT+I+ VSP G ALLL+GLP L ++YD ++D L Y N AV P+F LKT+ F + +LL+ HLEL++++CP +EWLSL+SA Y+++ LG LP L L +N++ +D DF+ N I L L+E +D+ + C LE+LV +CS + + + V R++ + + +LQ+F + QL + + +L LE + D+ QI+ L + L FR W T A +L LQ+ F + +Q+D F + + LL++Y SPL++ I Sbjct: 74 IPSNLVDDFVVQMLNTIDVVYEQSRVGRQLLVYVGSFIPRNLKILVMPLCLEQVTIAAILTLPLCTNLTELYMERADQSVITQGILCHILKYLRRLKVLALPKQCNDSVIAVVGQNCPNLESIVLNDTGVTNTGIAWLLCCRRLHTVIM--LKTEVSPPGAALLLHGLPSLSVLLYDSIADTLWYCSVNA--AVSPKFALKTVAFGATDLLTPGHLELLSQMCPGVEWLSLNSAFTYSVQTLGFLPKLTLLSVNFRGGSLDIHFEDFLRRNGMTIRCLQLVEAQDMEWTRFEKLLIFCPALESLVFYECSFERFELFEHVCELRRSSGKSQLKNLQIFRTPLMTPQLEHLVSILPNLSRLELGHLDWDVEQIRSFLTRNKHLDVFRVLTWRLNGLGATMASSLLWGSSRNTRCLNHTLQLEFPSRIIQLD-GNFTNTAPFQRGIPQFLLAEYGELSPLLDITRIG 533
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. nr
Match: gi|1022769113|gb|KZS13619.1| (Uncharacterized protein APZ42_020995 [Daphnia magna]) HSP 1 Score: 268.47 bits (685), Expect = 2.071e-79 Identity = 160/465 (34.41%), Postives = 255/465 (54.84%), Query Frame = 0 Query: 108 VPGHLYEQFLDNVLSALEVAGHYNHNGKQLMQYIILFFPKHTRRFRAQRYADRVLMPTVSCLMKCCQIEELYLEKADSPAITTYLLAHILKFMNRLRILALPKQCDDDVASIVGINCPKLESIVLTGTNLTNVGLSWFLCCRKLHTIILQGFFQGVSPKGVALLLNGLPGLRHVIYDVMSDVLTYIDFNTCEAVFPQFGLKTMLFHSMELLSSNHLELVTKLCPQIEWLSLDSALFYNLEGLGLLPHLRLFRLNYKSRPIDQTVVDFVSLNCHNITTLHLLEVKDLSLEDLNLSIGQCLNLETLVLCDCSI-KPDWDQPVRYNRQNPLSTSVDHLQLFSLQIFPCQLVKFIGLFRDLQVLETDRCELDLNQIKCVLLDQRELHTFRCTQWTHT-------------SAQNLT----NLQMAFRNCKLQMDRQEFAFEEDHMQTMTATLLSDYVGFSPLINFDTIS 554 +P +L ++F+ +L+ ++V + G+QL+ Y+ F P++ + ++V + + L C + ELY+E+AD IT +L HILK++ RL++LALPKQC+D V ++VG NCP LESIVL T +TN G++W LCCR+LHT+I+ VSP G ALLL+GLP L ++YD ++D L Y N AV P+F LKT+ F + +LL+ HLEL++++CP +EWLSL+SA Y+++ LG LP L L +N++ +D DF+ N I L L+E +D+ + C LE+LV +CS + + + V R+ + + +LQ+F + QL + + L LE + D+ QI+ L+ + L FR W S++N+ LQ+ F +Q+D F + + LL++Y SPL++ I Sbjct: 74 IPSNLVDEFVIQMLNTIDVVYEQSRVGRQLLVYVGSFIPRNLKILVMPLCLEQVTIAAILTLPLCTNLTELYMERADQSVITQGILCHILKYLRRLKVLALPKQCNDSVIAVVGQNCPNLESIVLNDTGVTNTGIAWLLCCRRLHTVIM--LKTEVSPPGAALLLHGLPSLNVLLYDSIADTLWYCSVNA--AVSPKFALKTVAFGATDLLTPGHLELLSQMCPAVEWLSLNSAFTYSVQTLGFLPKLTLLSVNFRGGSLDVHFEDFLRRNGMTIRCLQLVEAQDMEWTRFEKLLVFCPALESLVFYECSFERVEVFEHVCELRKIYGKSQLKNLQIFRTPLMTQQLEHLVSILPYLNRLELGHLDWDVEQIRIFLMRYKHLEIFRVLTWRFNGLGAAVASSILWGSSRNIRCLNHTLQLEFPARVIQLD-GHFTNTAPFQRGIPQFLLAEYGELSPLLDIARIG 533
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. nr
Match: gi|1059416688|ref|XP_017781191.1| (PREDICTED: uncharacterized protein LOC108566007 isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 71.633 bits (174), Expect = 1.982e-9 Identity = 72/242 (29.75%), Postives = 121/242 (50.00%), Query Frame = 0 Query: 200 MNRLRILALPKQCDDDVASIVGINCPKLESIVLTGT-NLTNVGLSWFLCCRKLHTIILQGFFQGVSPKGVALLLNGLPGLRHVIY-DVMSDVLTYIDFNT--CEAVFPQFGLKTMLFHSMELLSSNHLELVTKLCPQIEWLSL-DSALFYNLEGLGLLPHLRLFRL---NYKSRPIDQTVVDFVSLNCHNITTLHLLEVKDLSLEDLNLSIGQCLNLETLVLCDCSIKPDWDQPVRYNRQNP 433 M LR L L C D + I+G NCP L+ + +T + ++T+ + L C++L LQ +S +G A LL GL L+ + D + ++ Y+D N CE++ GL+ + H+ ++ ++ L L+ LCP+IE +SL F +L L L +LR +L ++ S ++ + + N+T+LHL V+D+ L L C L+ LVL +C + RY + P Sbjct: 167 MKNLRSLCLCFDCTDSILQILGENCPHLQCLDVTSSRSVTDRSIPHLLKCQQLRE--LQLNRTSISIEGFAHLLLGLEKLQDIGRCDELGSIIQYLDDNYAHCESL----GLRKI--HTRDV-NTQSLRLLVNLCPKIEQISLFHDERFTDLTALSTLYNLRDLKLLSCDFYSYYLNS----LLEIRGANLTSLHLEHVEDIDLNALIFVSQHCPRLKNLVLYNCDVIDKMTVHNRYLKVKP 395 The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein DAPPUDRAFT_107621 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold186_size273091:180030..182102- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold186_size273091-snap-gene-1.40 ID=maker-scaffold186_size273091-snap-gene-1.40|Name=hypothetical protein DAPPUDRAFT_107621|organism=Tigriopus kingsejongensis|type=gene|length=2073bp|location=Sequence derived from alignment at scaffold186_size273091:180030..182102- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein DAPPUDRAFT_107621' has the following synonyms
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