wd repeat and hmg-box dna-binding protein 1, maker-scaffold1959_size23944-snap-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000000659 (supercontig:LSalAtl2s:LSalAtl2s1105:15895:22907:-1 gene:EMLSAG00000000659 transcript:EMLSAT00000000659 description:"maker-LSalAtl2s1105-augustus-gene-0.32") HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0 Identity = 396/1058 (37.43%), Postives = 601/1058 (56.81%), Query Frame = 0 Query: 12 LSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTAL-AVSGDGRYLLA-GSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDG--LAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYE-LAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGF------LSEDDSNMSKPHFRGEDQ-------ERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPR----ASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---RAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPD--SQGDAGRNPFARKSVPNTP-SGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQ-----ALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQYRSPRVP--------KRKSEDELTASPASK 1027 +S +++ H EG ++Y P + T G+DGEVR ++ +DDD+ SHL GDETLA+AV F+ +A+ TN + Y + +G + ++ RFTAD T L V +G+ L+A GSDDM VK+++ ++K+ +F+GHEA ILSV LDP+ + VS+SCDG++ +WNIA E +I+ + L + +D ++K+ V +P G A+ ++ + Y +G T+V + K+E + V+ W +G+++ TS+G+I IW + D S+ + R GI +AW PSK E ++ ++ + YWG++ + E+NE++ E + + + ++ + DDD+EN+FSI+KIK GF L D N+S RG D+ E+ + + P AP+ D + +Q FQP +TP LSSRFM WNS+G+VK N ++E++I++EFHDT+IHH+FH+ N H ++MA LS +V A+E ++ AS++ ASSD + EWSI+MP EE+L IC G W+AA TD+R LRIF+ G Q + +L GP++ L+GH +++ + H G L + S+ AV D+ + +RH FTPLP P++ L W GFSDEGTP DS G VR+ WT++C+ S K KSD HF++G+SE+E VR I CKG YP T P PTV ++P LPLC+ +EK LEE+ K +L+ + + +A ET +IKLFALA+K+D E RALEICKLM+ T+ +A++YAS R++QLA ++++LA ++E+E++ R + S DMFE Q +EQ E +D NP+L AK+K+ I D SQGD RNPF + + NTP +G+IR G VFD ++ SQ+S+ + S + F T +K KQ I +V +N + L GF LWL EN I + GL++WK+L K +KD+Y+ PR P KR ED + + S+ Sbjct: 190 ISDLKYTHREGNCIIKYAPSSGKIYTGGADGEVREFKNMDDDESKSHLIGDETLALAVGKTHFYTSATNTNRVMSYKIEDGSEDCIVIRFTADVTTLDIVEKEGKILIAAGSDDMIVKVMNLNSHKEFIFKGHEASILSVCLDPKNLDK--VVSTSCDGSIILWNIADE-KIKKIHNSVLPRFSDFQSSKTLSQVVWNPADGSTFAVAHQNGIYFYNSTNG-TEVKNFQMNNSDDKNEYLSVLDWFINGEYIVGGTSSGKIIIWAYKDGSIHYNNTPGRSNGIRSIAWSPSKIEEISFLNKEAYWGIL-TVDLQEENEDRLEGANEMLNEN-------EMMRVFEENDGDDDDENAFSIKKIKASAGFQEDQEGLDVFDPNISS---RGIDEKVGEILMEKNISKAENP------APLSSFD----MKLQDTFQPASTPVHLSSRFMVWNSIGIVKAQNLDDESAIDIEFHDTSIHHAFHLPNPHGYTMACLSNLAVVFAAEADGEEEDEDHIASKLNVHYFASSDYNKEWSIDMPKGEEILCICIGSSWIAAGTDKRNLRIFTLAGMQKNVFSLNGPLVTLSGHGDYIFIVTHFGAPLVHNQSLYVAVLDI-SNYKRHLISHFTPLPLTPSSSLTWAGFSDEGTPTFSDSVGVVRIFDYS-SHQWTEVCNMSSYCKGKSDSHFMLGLSEKEEIVRAIKCKGTKYPVTVPKPTVTVLPMQLPLCDQGSEKTTLEEKYLKGEILN---KNEDDIAATNET----IIKLFALAIKSDQERRALEICKLMNMDTLKIAVKYASKLRKLQLANKVNELARQISEKEEERRDKLRLSTLCSQNDMFETQEEEEQEENGHQDSA-LQDNPLLNAKIKK----KNNVPLKCISDTQSQGDT-RNPFKKTLLKNTPQAGSIRTG-LVFDSISQSSQNSQIKSSQDN--FPNKTIVKKSE---KQRLITHSSSVRQGNNDINKETQSSYKQLKGFLLWLXENPQDSNNIVKNKE-------LGLKIWKELPKVEKDKYKVPRTPLSIVSTNRKRSLEDHIVRNTDSQ 1194
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 62.3882 bits (150), Expect = 3.197e-10 Identity = 62/277 (22.38%), Postives = 123/277 (44.40%), Query Frame = 0 Query: 7 RGSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDD--DDPIS-HLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKY-LAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLA 278 R + +L HT+G S+++++P+G + + +D ++++ D + IS H G +A + +D R V+AS T++ + L+ G+ + + + +++GS D +V++ D +T K H P+ +V + + VSSS DG RIW+ A QC+ L ++ + V P GKY LA +++++ ++ G K S K + + G ++ S + ++IW+ K + Sbjct: 17 RPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLGISDVAWS-SDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGXCRIWDTASG---QCLKTLIDNDNPPVS----FVKFSPNGKYILAATLDNTLKLWEYSKG--KCLKTYSGHRNEKYCVFANFS-VTGGKWIVSGSEDNMVYIWNLQTKEIV 279
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42") HSP 1 Score: 53.5286 bits (127), Expect = 1.343e-7 Identity = 50/204 (24.51%), Postives = 96/204 (47.06%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLY--QGIDDDDPISHLAGDETLAVAVTDERFFVAASGTN-TIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYA 223 ++ ++PD T+++ + G+V +Y + + + G L++A + + ++A+ T+ I +S+ G+ + +LA S D + LL GSDD +KL + + GH + +LSV P + E VS S D +V++W QCV +D A S P G+ +A + ++S+++Y+ Sbjct: 113 TVAFSPDSETLISGANAGKVNIYCVETGQNKQQLLDTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGKQXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTLSGHTSWVLSVQFSP---DNEXFVSGSSDRSVKVWE---STTKQCVHTFTDHSDQVWAAS-----YSPNGRKIATVSEDASILMYS 305
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 53.1434 bits (126), Expect = 3.389e-7 Identity = 60/269 (22.30%), Postives = 105/269 (39.03%), Query Frame = 0 Query: 8 GSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRL---YQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDT-QTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 S +S + H+ + ++PD S +++C DG +RL Y+G H+ AV +F + QGY Y + D TV L T Q + +F GH + + +A P + S S D +VR+W+ N ++ + G A +ST +A P G++LA S V++ W L A + + +A+++DG+ LA +++ + +W F Sbjct: 389 NSGVVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLWICYRG--------HM-------YAVWHVKF--------SPQGY----------------------------YFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHP---NCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTA--VST------LAFSPDGRFLASGGRDSRVLF-----WDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXF 590
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|28558055|sp|O13046.1|WDHD1_XENLA (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 551.206 bits (1419), Expect = 1.242e-177 Identity = 354/1078 (32.84%), Postives = 563/1078 (52.23%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR----LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDE---GDLDADQLAALM---------EDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSR-----ALRGSEP----LAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQRAQSQMSHADMFED-----------QGGDEQAEEEEEDD---------------------TNAPS-NPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIR--KGDTVFDDM--------------TLKSQSSRNRGSFGDRKFKPGTG-----IKVKPAFGKQSTIVLKKTVPAKDNGAQALS----PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 MR+ H EG + + + G+ +VTCGSDG++R+++ +DDDDP S G++ + A+ + + AAS N IQ ++ +G+ +G++TRFT + + + DG + AGS D VK++ + + + RGH AP+LSV+ DP++ + S+SCDG+VRIW I+ + + L K ND+ AKS +A PK GK++AIP+ +V +Y D + T ++ P + +VAW+ G +L + + G I W+ K+ K +GY IC LAWHP ++A D++G GL++ + + + +Q + +DE GD D D L M EDDDDN + + R R+ G + +DD + P + E V D + V Y + Q PFQ +TP L RFM WNSVGV++C+N+ ++N+I+VEFHDT+IHH+ H+TN+ NH++AD+S+ ++LA E E+ AS++ C +S D S EW ++MP E + AIC G+ W+A AT L+RIFS GG Q E+++L GP++ +A H L+V H GM G + + +L K ++ G PLP + + L W+GF+ EG+P +DS G VRLL+ G W IC+TR K KSDH+++VGI E QVR I CKG+ +P T P P VA++PF LP C+ TEKG +EE+ W+ + S + G E AE ++ Q L+K+FAL+ K + E R +E+ + M + LAI+YAS ++R+ LAQR+S++A + E+ ++ + + + F + GD +A+ ++D +N P+ NP ++ ++ S + I+ +QG NPF + +P+ A + ++ D+M T KS S + K K G ++ KP K T KK VP A ++ P +GFQLWL ENR + + ++G ++S I +G+ ++ L E++ Sbjct: 8 MRYGHPEGHTDVCFDDSGNFLVTCGSDGDIRIWESLDDDDPKSISIGEKAYSFALKNGKVVTAAS-NNAIQLHTFPDGEPDGILTRFTTNANHVVFNTDGTRIAAGSGDFLVKVLQVEDSTQQKTLRGHSAPVLSVSFDPKDI---YLASASCDGSVRIWKISDQTCEAVLPLLEKCNDVFNAKSICRLAWQPKSGKFVAIPVGKAVHLY-DRDSLKNICTLSDDFITQP-------VNIVAWSPCGQYLVAGSVDGCIVAWNIATKACLERIKHEKGYTICALAWHPHLPQIAYTDNEGNLGLLEDV--CQGDVKQPSAKVSSAETKDYDELFDGDDDEDFLNGDMIGHEGAVNDEDDDDNFTALTGRP--RNRGAIFDDDISSDVPSLKLVGNENPVVEDDQASSVQNFTSVASVKLSYNGPMPTPQQKPFQSGSTPVHLMHRFMVWNSVGVIRCYNDEQDNAIDVEFHDTSIHHAIHLTNSLNHTLADVSQEAVLLACETTEE--LASKLQCLHFSSWDTSKEWMVDMPKGENIQAICLGQGWVACATSALLIRIFSVGGVQKELISLFGPVVCMASHGEQLIVVYHRGMGFDGDQCLGVQLLELGKKKKQVLHGD--PLPLSRKSYLSWLGFTAEGSPCYVDSEGIVRLLNRSLGDTWVPICNTREHCKGKSDHYWVVGIHENPQQVRCIPCKGSRFPPTLPRPAVAVLPFNLPYCQITTEKGQMEEQYWRSQIFSNHSDYLSKHGYECDENFKAEAQKMQQELLMKMFALSCKLEREFRCMELAEFMTQNVMNLAIKYASRSKRLILAQRLSEMALEKAAEQASAEQNEEEDEEEEDFRSRLTAGYSRTATEWGDSRAKPVKQDQYEENNEEEMEEEEKEQEEALESNTPTANPFNKSVKTPDV--SESKLGAILSSNQGRV--NPFKVSASQKSPAFASNSSRSTSILDNMGKFPRKPSASGSPSTSKSDSVIIKPLAPKAKSKQGQATLFHSVQAKPIAKK--TTEEKKAVPTPPKAAADIAENKKPKTGFQLWLDENRPSILSE-NAGLDESEIIKEGMSRFRMLTSEER 1058
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|85541029|sp|P59328.2|WDHD1_MOUSE (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 530.791 bits (1366), Expect = 6.653e-170 Identity = 356/1100 (32.36%), Postives = 545/1100 (49.55%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR-LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKM---------TFVEDNEEQDVEEEEDVTKTTHDEGDLDADQ---------------------LAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVE--PVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRAL-----RGSEPLAEVE----ETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---------------------------RAQSQMSHADMFEDQGGDEQAEEEEE-----DDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT----VFDDMTLKSQ--SSRNRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS--------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NT+Q Y+ EG +G++TRFT + + +G G + AGS D VK+VD + FRGH+AP+LS++ DP++ F S+SCDGTVR+WNI+ + L K+ND+ AKS +A PK GK LA+P+E SV +Y +E W+ + + + +V W+ G +LA+ G I +W+ K K +GY IC LAWHP+ + D +G G+++ + V E+D + D T+ GD D + A D D+ENS + +K D E D +DQ R + P+ P P+ Q PFQ ++TP LS RFM WNSVG+++C+N++++++I+VEFHDT+IHH+ H+ NA N++M LS ++LA E A D AS++ C +S D S EW ++MP E++ AIC G W AAAT LLR+F+ GG Q E+ LPGP++++AGH L + H G G + + +L + + G PLP + L W+GFS EGTP +DS G VR+L+ G G WT +C+ R K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ +TEKG +EE+ W L L G + ++ + Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +R++ LAQ++S+LA + E E Q R +SQ+ A+ ED +E+ E N+ P L +S + SQG NPF K V ++ A+ T + D M S+ +S NR ++ KP + ++ ++ T KT K+N + S P +GFQ+WL ENR Q+ + ++++ I +G+ ++ L E++ + Sbjct: 3 ATQKPMRYGHTEGHTEVCFDDSGSYIVTCGSDGDVRMWEDLDDDDPKSVNVGEKAFSCALKNGKLVTAVSN-NTVQVYTFPEGVPDGILTRFTTNANHVVFNGAGNKIAAGSSDFLVKVVDVMDNSQQQTFRGHDAPVLSLSFDPKDI---FLASASCDGTVRVWNISDQTCAVSWPVLQKSNDVVNAKSICRLAWQPKAGKLLAVPVEKSVKLYRRE-----TWSNPFDLSDSSISQTLNIVTWSPCGQYLAAGAINGLIVVWNVETKDCMERVKHEKGYAICGLAWHPTCSRICYTDVEGNLGVLENVCDLSGKVSSNKVSSRVEKDYNDLFDGDDTS-SAGDFLNDNAVEIPSFSKGIINEDDDNDDIMLAADHDLGDDENSVDVTMLKADLSHKEEGD----------DDQARSIHNLPLIRPQRPFYDGPM-------PTPRQKPFQSSSTPLHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLLNAFNYTMGTLSHEAILLACESA--DELASKLHCLHFSSWDSSKEWMVDMPQNEDIEAICLGLGWAAAATTALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGRKKNQVLHGD--PLPLTRKSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQTSTEKGQMEEQFWHSVLFHNYLDYLAKNGYDYEESIKNQAVKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVHLAIKYASRSRKLILAQKLSELAAEKAAELAETQSEEEKEEDFREKLNAGYSHTTTEWSRPRVRSQVEDAEDREDTVSEEKPESHNHGQNLFQSANSSDTPAL-------------KSGAVFSSSQGWV--NPF--KVVVSSKEPAVSANSTRSANILDSMNKSSRKSTSLNRMENNEKSPVIKPLTPKPRSKQASAASYFQKRTPQADKTEEVKENPKSSSSDAPAVCLQNSENQRPKTGFQMWLEENRSQILSDNPDISDETDIIKEGMIRFRVLSAEERKAW 1054
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|28558057|sp|O75717.1|WDHD1_HUMAN (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 525.398 bits (1352), Expect = 1.131e-167 Identity = 357/1106 (32.28%), Postives = 555/1106 (50.18%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKM---------TFVEDNEEQDVEEEEDVTKTTHDEGDLDAD------------------------------QLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLA----EVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQE----------------------------EQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIR--KGDTVFDDM-------TLKSQSSRNRGSFGDRKFKPGTGIKVKPA---FGKQSTIVLKKTVPAKDNGAQALS---------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP G++ + A+ + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D VK+VD + + FRGH+AP+LS++ DP++ F S+SCDG+VR+W I+ + L K ND+ AKS +A PK GK LAIP+E SV +Y +E W+ + + + + +V W+ G +LA+ + G I +W+ K K +GY IC LAWHP+ ++ D++G GL++ + + V E+D + D + + GD D Q + ++EDD ENS I +K + L E++ ED + G + L V P Y + Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA E D AS++ C +S D S EW I++P E++ AIC G+ W AAAT LLR+F+ GG Q E+ +L GP++++AGH L + H G G + + +L K ++ G PLP + L WIGFS EGTP +DS G VR+L+ G G WT IC+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L + LA E EE+ Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +R++ LAQ++S+LA + E E Q R ++Q+ ED +A++EE+ + + P N +S + SQG NPF + P+ ++ + + D+M T S+++ N S + P K A F K+++ K ++N LS P +GFQ+WL ENR + + ++++ I +G+ ++ L E++ Sbjct: 3 ATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSCALKSGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDSSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRE-SWSH---QFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS-NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDD---ENSVDISMLKTGSSLLKEEE----------EDGQEG--------SIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACE--STDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHL---DYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVE-----EDAEDSGEADDEEKPEIHKPGQNSFSKST--NSSDVSAKSGAVTFSSQGRV--NPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEER 1062
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|30913116|sp|Q9C107.1|MCL1_SCHPO (RecName: Full=Minichromosome loss protein 1; AltName: Full=DNA polymerase alpha accessory factor Mcl1) HSP 1 Score: 165.236 bits (417), Expect = 1.453e-40 Identity = 197/839 (23.48%), Postives = 341/839 (40.64%), Query Frame = 0 Query: 16 RFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLV-DTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVV----ALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGV--VAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYW----GLIDKMTFVEDNE-EQDVEEEEDVTKTTHDEGDL--DADQLAALMEDDDDN----ENSF-------SIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNN-EENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEV-LAICCGRDWLAAATDRRLLRIFSSGGNQWEI-LALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVR-LLHSGF--GACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLC-----EAATEKGVLEEELWKCNLLSRALRGS-----------EPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAAT-IGLAIRYASSNRRMQLAQRISKLANDA 806 R+AHT+G + L YT DG ++T GS+ +R +Q D++P S + + E +F S T+ Y + ++ R T +A S DG ++ SD+ VK+V T + + R +A V P + F SSC+G + ++ I+ + N +++ ++ + A HPK A+ V D W ++ L PK+ GV ++W+ +G ++A++ G I IWD + E + + LAW P + L+ +QG +I K E+N+ + + + +T+ + DL D+ + + D D N EN F S + D+ + E+D N++K + +R + LL Q I P +TP + + R++ N VG + + E N+I VEFHD H +H + MA L + AS E P I + EW++ +P + E + I + T +R+FS G I + P +A + ++ ++ + G++ G+ + +++ D+ + G LP P L + FSD G P + DS G + L+H A W + DT + KS ++ ++Q IL KGA+ P P F +P C +A+T VLEE + L L S +A +E + L++L A + R E+ K + T I A + A + +A++I L ++ Sbjct: 9 RYAHTDGLTRLAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAENYFCTCSEDATVCVYPIDSPTEHTLLARTTLPIRDVAYSVDGNWIAIASDETAVKVVSSTDSSQIFSLRPAKASNKHVTYSPNGN---FLAVSSCNGILYFYDTQTRELIKFL-----TNTIASLEAESEICSKAAWHPKNGTFAVASTDHFVSVISPDDWLPLYKLL-----PKENHSGVTDISWSSNGMYIAASFKKGGILIWDTQSHEVVVELPYS---TVVALAWQPFENVLSFTTNQGILYSCPDVIPKSILKEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNVNDLDGNSANEENEFINHDGLDSSLDLDGDSYMVDENDLNLAKKRKQKALIDRTTTIENGSSKRRLL----------QASIHKPVHTGSTPWQGNRRYLCLNLVGFIWTVQQDAEHNTITVEFHDETTHRKYHFVDDQKFEMACLDHEGALYASPATESSPGV--IYYKAHVDWSRKSEWAMALPMENESPVTISLSSSVVLVCTSAGYVRVFSRQGFPISIHRSKHLPFVACSSFQDTIITIANDGLSSDGNSRLVYSIEDISRDEMLQ-TGDGVALP--PQGTLESVFFSDVGDPYIYDSTGVLLVLMHWRIPGQAKWIPVLDTNELERRKSRQESYWPVTVADNQFHCILLKGASRYPYFPRPMFTEFDFRIP-CNTNNPDASTSVPVLEELQLRNKLFLTLLEDSIGDGDVTEDEKISIARLEANIDKALLQLIQKACLEERIERVYELTKTLRRTTSIAAAQKIALHHSLTNVAEKIGNLLSNV 815
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20140995|sp|Q8YTC2.1|Y2800_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr2800) HSP 1 Score: 78.1814 bits (191), Expect = 2.379e-13 Identity = 76/264 (28.79%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 17 FAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAG--DETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTR-----LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWD 271 HT S+ Y+PD +V+ D ++L+ I L G +E +VA + D + S +++ ++ GQ T +A S D + L +GS+D TVKL D QT K GH I +A P + + S+S D +VR+WNI+ QC L + D A V HP+GK +A V K+W L + D+I+G+ AW+ DG LASA++ + +WD Sbjct: 849 IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWD-CQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSP---DSQTLASASTDSSVRLWNISTG---QCFQILLEHTDWVYA-----VVFHPQGKIIATGSADCTV---------KLWNISTGQCLKTLSEHSDKILGM-AWSPDGQLLASASADQSVRLWD 1090 HSP 2 Score: 66.6254 bits (161), Expect = 9.478e-10 Identity = 76/288 (26.39%), Postives = 133/288 (46.18%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAG--DETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWT-KVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF----YDKSLAFETKTTRGYGICDLAWHPSKYELA 302 S+ + PDG T+ + D ++L+ I D + L G D VA + D +++ +TI+ + +++G+ + T ++A S DG+ L +GS D T+K+ + T + + GH + S+A P + + VS S D T+++W+ I+ + G N++ + VA P G+ LA + ++ SV ++ G K W + P VA++ D LAS ++ + +WD+ Y SL E T YGI A+ P LA Sbjct: 731 SVAFHPDGETLASASGDKTIKLWD-IQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP---DSKILVSGSGDRTIKLWDCQTHICIKTLHG--HTNEVCS------VAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALP-------VAFSPDRQILASGSNDKTVKLWDWQTGKYISSL--EGHTDFIYGI---AFSPDSQTLA 994 HSP 3 Score: 65.0846 bits (157), Expect = 2.535e-9 Identity = 66/260 (25.38%), Postives = 116/260 (44.62%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLY---QGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAI-PMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 HT+ + ++PDG+T+ + +D ++L+ QG SH ++A + D + + SG TI+ ++ G+ T ++A S D + L++GS D T+KL D QT+ GH + SVA P + + S D +VR+WN QC+ D + VA P + LA + +V ++ + G +S+ D I G +A++ D LASA++ + +W+ Sbjct: 766 GHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSA-DGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSP---DGQTLACVSLDQSVRLWNC---RTGQCLKAWYGNTDWALP-----VAFSPDRQILASGSNDKTVKLWDWQTG-----KYISSLEGHTDFIYG-IAFSPDSQTLASASTDSSVRLWNI 1007
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|1346729|sp|P49695.1|PKWA_THECU (RecName: Full=Probable serine/threonine-protein kinase PkwA) HSP 1 Score: 73.559 bits (179), Expect = 5.525e-12 Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 0 Query: 9 SATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQ---GIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDH-VFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGE 178 + T A+ HT+ ++ ++PDGS V + DG +RL+ G + D + + +++A + + + +T+ + +A G++ T A+A S DG L +GSDD T++L D ++H GH P+ SVA P E S+S DGT+RIW IA E Sbjct: 574 TGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERD--VLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP---EGTTLASASEDGTIRIWPIATE 742 HSP 2 Score: 70.4774 bits (171), Expect = 5.194e-11 Identity = 64/217 (29.49%), Postives = 98/217 (45.16%), Query Frame = 0 Query: 19 HTEGRSSLRYTPDGSTVVTCGSDGEVRLYQ-GIDDDDPISHLAGDETLAVAVTDERFFVAA-SGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVW 232 HT + ++PDGS V + DG RL+ + + D AVA + + VA+ S TI+ + +A G+ V+ + +LA S DG L+ GSD TV L D + + H F GH + +VA P + S S D T+R+W++A + E ++G + VA HP+G LA A EDG ++W Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDS-TVHLWDVASGEALHTFEGHTDWVRAVAFSPDGA---LLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVH--------SVAFHPEGTTLA---------SASEDGTIRIW 737 HSP 3 Score: 59.3066 bits (142), Expect = 1.475e-7 Identity = 75/294 (25.51%), Postives = 120/294 (40.82%), Query Frame = 0 Query: 19 HTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDH-VFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSP-GVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYG--ICDLAWHPSKYELAIMDSQG 308 HT+ ++ ++PDG+ + + D VRL+ VA +ER ++ EG + V+ +A S DG + +GS D T +L + T +H V +GH + +VA P S S S DGT+R+W++A E + A+ N +S A SP G + +H + + +S +G T W R VA++ DG LAS + I +WD + E T G+ + +A+HP LA G Sbjct: 500 HTDWVRAVAFSPDGALLASGSDDATVRLWD------------------VAAAEER--------------AVFEGHTHYVLD--------IAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGS---MVASGSRDGTIRLWDVATGKERDVLQAPAE-NVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTD-WVR-------------AVAFSPDGALLASGSDDRTIRLWDVAAQE---EHTTLEGHTEPVHSVAFHPEGTTLASASEDG 732
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20532307|sp|Q8YV57.1|Y2124_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein all2124) HSP 1 Score: 70.8626 bits (172), Expect = 4.813e-11 Identity = 80/308 (25.97%), Postives = 135/308 (43.83%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGL----------AKANDLSTAKSPGVVAL-------------HPKGKYLA--IPMESSVVIYAQEDGWTKVWTR-LSAPNPPKDEIMGV--VAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRG----YGI 289 H + S+ ++PDG T+ + GSD ++L+Q D + + G E V D + +AS ++I+ + GQ +T +A + S DG+ + AGS+D TVKL Q K GH+ + S++ P + + S+S D T+++W IA ++ + G + +++A + L H G Y +P +S+++ A D ++W R L +P GV V++ DG +A+A + G I +W D SL KT G YGI Sbjct: 1111 GHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ-TSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSP---DGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLP-DSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSL---LKTLPGNKAIYGI 1410 HSP 2 Score: 62.7734 bits (151), Expect = 1.572e-8 Identity = 61/260 (23.46%), Postives = 116/260 (44.62%), Query Frame = 0 Query: 17 FAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETL-AVAVTDERFFVA-ASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 A G ++ + DGS + T G+DG ++L+ D + L G++ + ++ T + +A A+ T++ + + +G++ + + + S DG+ L + S D TVKL + K +GH + V+ P + + S+S D T+R+W+ N I+ L NDL + V +P G LA + +V ++ DG L ++ +++ DG ++ASA+ + IW Sbjct: 1360 LAGNSGVYAVSFLHDGSIIATAGADGNIQLWHS-QDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP---DGKIIASASADKTIRLWDSFSGNLIKS---LPAHNDLVYS-----VNFNPDGSMLASTSADKTVKLWRSHDG------HLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI 1601
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|3123058|sp|Q55563.1|Y163_SYNY3 (RecName: Full=Uncharacterized WD repeat-containing protein sll0163) HSP 1 Score: 67.781 bits (164), Expect = 4.580e-10 Identity = 60/267 (22.47%), Postives = 111/267 (41.57%), Query Frame = 0 Query: 27 RYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWTKVWTR---LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYG 288 +++PDG +VT +D +L+ + + D L V + D ++ V AS T + ++ G+ V+ + + A S DG++++ SDD T + + + + RGHE P+ ++ + +++S D T RIW+ G + +A H Y A E +++ D ++W R A ++G V W+ DG L +A++ G +WD + L T G+G Sbjct: 1390 QFSPDGQWIVTGSADKTAQLWNVLGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFS---ADSRYILTASVDNTARIWDFLGRPLL-------------------TLAGHQSIVYQARFSPEGNLIATVSADHTARLWDRSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSGRELL----TLEGHG 1629 HSP 2 Score: 59.3066 bits (142), Expect = 1.494e-7 Identity = 61/240 (25.42%), Postives = 89/240 (37.08%), Query Frame = 0 Query: 75 FVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCV-----------------------DGLAKANDLSTAKSPGVVALHPKG-KYLAIPMESSVVIYAQEDGWTKVW---TRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGY 287 V + TN I G+ V+ TAL S DG+Y S D TVKL + RGHE + SV P +F V+S D T RIWN AGE C DG A+ DL + G+ H + + ++ DG ++W ++ A + W+ DG + +++S G +W + K L T RG+ Sbjct: 1028 LVLTATTNGIAYLWSFHGELINVLRGHQEAITALDWSADGQYFATASADHTVKLWQRHGEEVATLRGHEDWVRSVHFSPHH---QFLVTSGQDNTARIWNFAGEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARLWDLE-GREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLG----TLRGH 1259
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20532311|sp|Q8YRI1.1|YY46_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr3466) HSP 1 Score: 64.3142 bits (155), Expect = 4.409e-9 Identity = 66/260 (25.38%), Postives = 111/260 (42.69%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAI-PMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 HT +S+ + PDGST+ + SD VRL++ I+ + G + +V D + S T++ + ++ + T ++A + DG L +GS D TV+L + + K H F+GH + + SV P + S S D TVR+W+I+ G L G V P G LA + +V +++ G K L N +G + ++ DG LAS + + +W+ Sbjct: 1198 GHTSWVNSVVFNPDGSTLASGSSDQTVRLWE-INSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP---DGTMLASGSDDQTVRLWSISS--------GECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG--KCLYTLQGHN----NWVGSIVFSPDGTLLASGSDDQTVRLWNI 1439 HSP 2 Score: 62.003 bits (149), Expect = 2.337e-8 Identity = 66/258 (25.58%), Postives = 107/258 (41.47%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWD 271 HT +S+ + PDGS + + SD VRL+ I + G +V D + SG T++ + ++ + T+ +++ S DG L +GSDD TV+L + + + F GH + SV P + S S D TVR+W+I+ +C+ L N+ G + P G LA + V ++T N + VA++ DG LAS + I +WD Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLWD-ISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP---DGAILASGSGDQTVRLWSISSG---KCLYTLQGHNNW-----VGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS-----VAFSSDGLILASGSDDETIKLWD 1480 HSP 3 Score: 60.077 bits (144), Expect = 1.063e-7 Identity = 65/257 (25.29%), Postives = 106/257 (41.25%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIW 270 HT +++ ++PDG+T+ + D VRL+ I + L G + +V D + S T++ + + + T+ ++ + DG L +GS D TV+L D + K H F+GH + SVA +P + S S D TVR+W I+ + G S S V P G LA + V ++T L N +G V ++ DG LAS + + +W Sbjct: 1156 GHTNWVNAVAFSPDGATLASGSGDQTVRLWD-ISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP---DGSMLASGSGDQTVRLWEISSSKCLHTFQG-----HTSWVSS---VTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTN-----WVGSVIFSPDGAILASGSGDQTVRLW 1395
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|384872644|sp|Q9UUG8.2|TUP12_SCHPO (RecName: Full=Transcriptional repressor tup12) HSP 1 Score: 62.7734 bits (151), Expect = 1.033e-8 Identity = 66/276 (23.91%), Postives = 118/276 (42.75%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAV---TDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADG-TALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGV--------------VALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEI--------MGVVAWAKDGDFLASATSTGRIFIWDFYD 274 S+ ++PDG + T D ++R++ I L G E ++ D + V+ SG T+ + + G+ + ++ T DG T + S DG+++ AGS D +++ + GHE + SVA P + ++ VS S D T+++W E+QCV +A S K G+ V + P GK+ +I +D + W +P+ P ++ + VA + +G A+ + R IW + D Sbjct: 351 SVAFSPDGKYLATGVEDQQIRIWD-IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSP---DGKYLVSGSLDNTIKLW------ELQCVSNVAP----SMYKEGGICKQTFTGHKDFILSVTVSPDGKW---------IISGSKDRTIQFW----SPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYED 597
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1207918534|ref|XP_021348121.1| (WD repeat and HMG-box DNA-binding protein 1-like isoform X2 [Mizuhopecten yessoensis] >gi|1205905990|gb|OWF52969.1| WD repeat and HMG-box DNA-binding protein 1 [Mizuhopecten yessoensis]) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 369/1028 (35.89%), Postives = 551/1028 (53.60%), Query Frame = 0 Query: 11 TLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSK-YELAIMDSQGYWGLIDKMTFVEDNEE----QDVEEEEDV------------TKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVE-----PVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRAL-------------RGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLM-DAATIGLAIRYASSNRRMQLAQRISKL----ANDALQEEQEQQRAQSQMSHADMFEDQGG----DEQAEEEEEDDTNA-----------PSNPILEAKMK-----RNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTV-------PAKDNGAQALSPLSGFQLWLAENR 971 T+ +R+AH++G + + + G ++TCG+DG+VR++ GI+DDD ISH GD + RFF + S TN++Q ++ +G +G++TRFTA + V+ G+ ++A S D T+K V+ + +GHEAP+LSVALDP+E EF SSSCDGTVRIW +++ ++ L K ND+S +K+ + KG+ L +P+E + IY + W K T A + ++ V+A + DG LA+A+S G I + D + + + + + LAW+P K ELA D +G GL++ + D ++ Q+ +E + + T+DEG + + L D+ D+++ + K D DD MSK D + G P++ PP APV + + +Q PFQP +TP LSSRFM WNS+G++K +N +EENSI++EFH+T+IHH+ HITN ++++AD+S +VLA+E DD S++TC S D EW+ MP EE++A+ G DW+A ATD+R +R+FS GG Q E+L++PGP++ + GH N LM H GM +PG + + + R G PLP +P T L W GFS EGTP M+S+G VR+ + FG W Q+ +T+S K KSDH+++VG++E Q+R I CKG+ YP P P V+++PF + LCE TEK EE LWK L + R +E L +E L+KLFAL+ ++D E RALE+C++M + T+ LAI+YAS + M LA+RIS+L +A QEE E+ +++ H +GG DE+ +E +++ N PS P+L K K R S RS SQG S PSG+ KG VFD M K ++ +++ + KPG I VKP Q + K P + A S S F LWL ENR Sbjct: 3 TVQPLRYAHSDGHTDVCFDDSGKHMLTCGTDGDVRVWAGIEDDDAISHRVGDRVYGIVYKSGRFFTS-SDTNSVQAHTFPDGAPDGILTRFTAPVNHMVVNQSGKTMVACSSDFTIKAVEVDSCSHKTMQGHEAPVLSVALDPKE---EFVASSSCDGTVRIWQHNDHSQVTSMNILPKTNDVSLSKTMCRLCWDLKGENLFVPVEKEIHIYVRS-SWKKAGT-FQAEDIAG--VLSVLALSPDGKTLAAASSEGNILVMDVKTRKCVDRYRHPKKFSVTSLAWNPKKATELAFCDKEGQLGLLEDIKLSLDAQQSIPVQETRAKETLGIFDDDDDDDMLIQATNDEGKVGME----LGADNSDDDDQMPVIKPLGDI-----DDDTMSK----KSDLDDGASVMSDAPLELPP-----APV-AVEGYKPTPLQNPFQPGSTPVHLSSRFMVWNSIGIIKQYNTDEENSIDIEFHNTSIHHAMHITNTSHYTLADMSSEAVVLAAE--SDDGNPSKLTCMHFGSWDSCKEWTTTMPDGEEIMAVTLGEDWVAVATDKRNVRLFSLGGVQREMLSIPGPVVCMTGHTNQLMAVYHRGMGIPGDQCLGVTLMYVEGKQRTVLGGQ--PLPLSPKTALAWTGFSAEGTPFYMESSGIVRMFNRKFGPSWMQVANTKSHAKGKSDHYWIVGVNENPQQLRCIPCKGSRYPPVLPRPAVSILPFQVQLCEMNTEKSQYEETLWKTRLFGQHFDHWMSQGFEFEPSRKAESLKPAQE----ALMKLFALSARSDREFRALEVCEMMPEQHTLQLAIKYASRIKHMHLAERISELAQQKEEEAEQEEDEEDVPEARNGHLGARPKEGGHLVQDEEVMDEGDEEINMDGEEEEEEEDRPSGPMLNLKSKSEKPTRPTFISSARSSNPFKMSQG----------SQKTAPSGSA-KGTQVFDSMNRK-KTEKSKVADPVIIGKPGK-ILVKPKKSTQGNLFATKVKTDTAKSDPTNETPAPQQSTPSAFDLWLEENR 982
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1228001522|ref|XP_021932633.1| (WD repeat and HMG-box DNA-binding protein 1 isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 323/819 (39.44%), Postives = 469/819 (57.26%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPS-KYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQE---RGVEPVD-----APPTSGL--LAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNL--------LSRALRGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDA-ATIGLAIRYASSNRRMQLAQRISKLANDALQEEQE 812 MR+AHT+G + + Y+ +G ++TCG DG+VR++ G++DDDP S G++ L V ++ ++V + N +Q YS +G+I+RFTA T +A+S DG+ ++AGS DM + + + T K V GH+APIL VALDP++ ++ SSSCDGTVR+W I + + + N AK G + PK G YLA+P + IY +E W KV LS + + + A++ G++LA TS G I +W+ + T+ RGY IC LAW+P E+A D G G I+ + V +E+ T T D L+ + NEN S+ KIK + +S+P F G++ + GV D SG+ +APV D+QPPFQP++TP L RFM WNSVG+V+C++ +ENS++VEFHDT++HH+ HI N H+MA L+ LVLA EI ++ P S++ C LL S D S EWS+++P EE LAI G+ WLA ATD R LR+F+ G Q E+++LPGP++ +AGH N L+ H GM LPG S+ FAVF L SG+ +F PL P + L W GFSDEGTP +DSAG +R+ + W +CDT++ K KSDH+F++GISE+ VR +LCKG+ YP TTP P VA + LP+CEA TEK V+EE W+ L L ++ + +IKLFALA ++ E RA+EIC LM + + LA++YAS +M LA +++++A + E ++ Sbjct: 8 MRYAHTDGHTDVCYSDNGKYILTCGIDGDVRIWAGLEDDDPSSQCVGEQALTVVCKNDHYYVG-TDNNNVQAYSFPGSDRDGIISRFTAAVTHIAISNDGKRIVAGSSDMEIHVSNVGTSKTTVLTGHKAPILGVALDPKD---KYVASSSCDGTVRVWTIDDTQTVHSWNCVPVCNAFLAAKCLGRPSWQPKTGHYLAVPHGKEIRIYERET-WNKV---LSFSHDQVKQDFSISAYSPCGNYLAGCTSGGDICVWNVNLHTCVMSTRHDRGYRICGLAWNPGGNGEIAYCDVMGQLGTIEDCIPSASQDNSSVTQEK--TMTVDDMIHLNPIDDDDDDD----NENVISLDKIK----------AELSQPSFFGDNDKLSHAGVNIADDDDDVESKISGVARIAPV--------CDLQPPFQPSSTPVHLQHRFMVWNSVGIVRCYSTEDENSVDVEFHDTSLHHALHINNFFKHTMATLTDEVLVLACEIQDEAP--SKVVCVLLNSWDGSKEWSVDLPEGEEALAIAAGKGWLAVATDTRNLRLFTVAGTQREVVSLPGPVVCVAGHRNRLLTVFHNGMGLPGDQSLGFAVFSL-GSGQLQVLTAFQPLSMTPKSTLKWAGFSDEGTPFTLDSAGIIRMFSR--KSFWLPLCDTQAHCKGKSDHYFVLGISEKCQNVRCVLCKGSYYPPTTPRPAVAEISLKLPMCEATTEKSVMEERFWRLQLACSTTGDMCKMGLDSFNDKDALDRSIKETVIKLFALACRSGFEYRAVEICDLMPSHHVVQLAMKYASKLGKMNLADKVAEVATRKVDEREQ 789
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|646704398|gb|KDR12601.1| (WD repeat and HMG-box DNA-binding protein 1 [Zootermopsis nevadensis]) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 320/816 (39.22%), Postives = 467/816 (57.23%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPS-KYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERG-----VEPVDAPPTSGL--LAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNL--------LSRALRGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDA-ATIGLAIRYASSNRRMQLAQRISKLANDALQEEQE 812 MR+AHT+G + + Y+ +G ++TCG DG+VR++ G++DDDP S G++ L V ++ ++V + N +Q YS +G+I+RFTA T +A+S DG+ ++AGS DM + + + T K V GH+APIL VALDP++ ++ SSSCDGTVR+W I + + + N AK G + PK G YLA+P + IY +E W KV LS + + + A++ G++LA TS G I +W+ + T+ RGY IC LAW+P E+A D G G I+ + V +E+ T T D L+ + NEN S+ KIK + +S+P F G++ + + SG+ +APV D+QPPFQP++TP L RFM WNSVG+V+C++ +ENS++VEFHDT++HH+ HI N H+MA L+ LVLA EI ++ P S++ C LL S D S EWS+++P EE LAI G+ WLA ATD R LR+F+ G Q E+++LPGP++ +AGH N L+ H GM LPG S+ FAVF L SG+ +F PL P + L W GFSDEGTP +DSAG +R+ + W +CDT++ K KSDH+F++GISE+ VR +LCKG+ YP TTP P VA + LP+CEA TEK V+EE W+ L L ++ + +IKLFALA ++ E RA+EIC LM + + LA++YAS +M LA +++++A + E ++ Sbjct: 8 MRYAHTDGHTDVCYSDNGKYILTCGIDGDVRIWAGLEDDDPSSQCVGEQALTVVCKNDHYYVG-TDNNNVQAYSFPGSDRDGIISRFTAAVTHIAISNDGKRIVAGSSDMEIHVSNVGTSKTTVLTGHKAPILGVALDPKD---KYVASSSCDGTVRVWTIDDTQTVHSWNCVPVCNAFLAAKCLGRPSWQPKTGHYLAVPHGKEIRIYERET-WNKV---LSFSHDQVKQDFSISAYSPCGNYLAGCTSGGDICVWNVNLHTCVMSTRHDRGYRICGLAWNPGGNGEIAYCDVMGQLGTIEDCIPSASQDNSSVTQEK--TMTVDDMIHLNPIDDDDDDD----NENVISLDKIK----------AELSQPSFFGDNDKLSHAVADDDDDVESKISGVARIAPV--------CDLQPPFQPSSTPVHLQHRFMVWNSVGIVRCYSTEDENSVDVEFHDTSLHHALHINNFFKHTMATLTDEVLVLACEIQDEAP--SKVVCVLLNSWDGSKEWSVDLPEGEEALAIAAGKGWLAVATDTRNLRLFTVAGTQREVVSLPGPVVCVAGHRNRLLTVFHNGMGLPGDQSLGFAVFSL-GSGQLQVLTAFQPLSMTPKSTLKWAGFSDEGTPFTLDSAGIIRMFSR--KSFWLPLCDTQAHCKGKSDHYFVLGISEKCQNVRCVLCKGSYYPPTTPRPAVAEISLKLPMCEATTEKSVMEERFWRLQLACSTTGDMCKMGLDSFNDKDALDRSIKETVIKLFALACRSGFEYRAVEICDLMPSHHVVQLAMKYASKLGKMNLADKVAEVATRKVDEREQ 786
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1207918532|ref|XP_021348120.1| (WD repeat and HMG-box DNA-binding protein 1-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0 Identity = 366/1038 (35.26%), Postives = 550/1038 (52.99%), Query Frame = 0 Query: 11 TLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSK-YELAIMDSQGYWGLIDKMTFVEDNEE----QDVEEEEDV------------TKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVE-----PVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRAL-------------RGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLM-DAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQRAQS--------------QMSHADMFEDQGG----DEQAEEEEEDDTNA-----------PSNPILEAKMK-----RNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTV-------PAKDNGAQALSPLSGFQLWLAENR 971 T+ +R+AH++G + + + G ++TCG+DG+VR++ GI+DDD ISH GD + RFF + S TN++Q ++ +G +G++TRFTA + V+ G+ ++A S D T+K V+ + +GHEAP+LSVALDP+E EF SSSCDGTVRIW +++ ++ L K ND+S +K+ + KG+ L +P+E + IY + W K T A + ++ V+A + DG LA+A+S G I + D + + + + + LAW+P K ELA D +G GL++ + D ++ Q+ +E + + T+DEG + + L D+ D+++ + K D DD MSK D + G P++ PP APV + + +Q PFQP +TP LSSRFM WNS+G++K +N +EENSI++EFH+T+IHH+ HITN ++++AD+S +VLA+E DD S++TC S D EW+ MP EE++A+ G DW+A ATD+R +R+FS GG Q E+L++PGP++ + GH N LM H GM +PG + + + R G PLP +P T L W GFS EGTP M+S+G VR+ + FG W Q+ +T+S K KSDH+++VG++E Q+R I CKG+ YP P P V+++PF + LCE TEK EE LWK L + R +E L +E L+KLFAL+ ++D E RALE+C++M + T+ LAI+YAS + M LA+RIS+LA +E ++++ + + H +GG DE+ +E +++ N PS P+L K K R S RS SQG S PSG+ KG VFD M K ++ +++ + KPG I VKP Q + K P + A S S F LWL ENR Sbjct: 3 TVQPLRYAHSDGHTDVCFDDSGKHMLTCGTDGDVRVWAGIEDDDAISHRVGDRVYGIVYKSGRFFTS-SDTNSVQAHTFPDGAPDGILTRFTAPVNHMVVNQSGKTMVACSSDFTIKAVEVDSCSHKTMQGHEAPVLSVALDPKE---EFVASSSCDGTVRIWQHNDHSQVTSMNILPKTNDVSLSKTMCRLCWDLKGENLFVPVEKEIHIYVRS-SWKKAGT-FQAEDIAG--VLSVLALSPDGKTLAAASSEGNILVMDVKTRKCVDRYRHPKKFSVTSLAWNPKKATELAFCDKEGQLGLLEDIKLSLDAQQSIPVQETRAKETLGIFDDDDDDDMLIQATNDEGKVGME----LGADNSDDDDQMPVIKPLGDI-----DDDTMSK----KSDLDDGASVMSDAPLELPP-----APV-AVEGYKPTPLQNPFQPGSTPVHLSSRFMVWNSIGIIKQYNTDEENSIDIEFHNTSIHHAMHITNTSHYTLADMSSEAVVLAAE--SDDGNPSKLTCMHFGSWDSCKEWTTTMPDGEEIMAVTLGEDWVAVATDKRNVRLFSLGGVQREMLSIPGPVVCMTGHTNQLMAVYHRGMGIPGDQCLGVTLMYVEGKQRTVLGGQ--PLPLSPKTALAWTGFSAEGTPFYMESSGIVRMFNRKFGPSWMQVANTKSHAKGKSDHYWIVGVNENPQQLRCIPCKGSRYPPVLPRPAVSILPFQVQLCEMNTEKSQYEETLWKTRLFGQHFDHWMSQGFEFEPSRKAESLKPAQE----ALMKLFALSARSDREFRALEVCEMMPEQHTLQLAIKYASRIKHMHLAERISELAQQKEEEAEQEEDEEDVPEASYNPVTDWAGRNGHLGARPKEGGHLVQDEEVMDEGDEEINMDGEEEEEEEDRPSGPMLNLKSKSEKPTRPTFISSARSSNPFKMSQG----------SQKTAPSGSA-KGTQVFDSMNRK-KTEKSKVADPVIIGKPGK-ILVKPKKSTQGNLFATKVKTDTAKSDPTNETPAPQQSTPSAFDLWLEENR 992
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|762156940|ref|XP_011416613.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X1 [Crassostrea gigas] >gi|405975316|gb|EKC39890.1| WD repeat and HMG-box DNA-binding protein 1 [Crassostrea gigas]) HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0 Identity = 361/1056 (34.19%), Postives = 547/1056 (51.80%), Query Frame = 0 Query: 11 TLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPS-KYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPH--FRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPL---------AEVEETQSRCLIKLFALAMKNDHETRALEICKLM-DAATIGLAIRYASSNRRMQLAQRISKLANDALQEE------------QEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGR-NPFARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKG----------LEMWKQLKKEDKDQYRS---PRVPKRKSEDELTASPASK 1027 + S +R+AH+EG +SL Y G ++TCGSDG+VR+++G +DDD ISH GD+ VA ++RF++A NT+Q Y+ G +G++ RFTA + ++ G L+AGS D T+KLVD + F GHEAP+LSVALDP+E EF SSSCDG+V IW + + +++ L K D+S K + G++L +P+E+ + IY + W+ T S + + V+ + DG LA+ G I I+D K+ K G I L+W+PS + E+A D +G GL+ ++ N+ +E+ V +T L +DDDD E + + ++ F ++DSN S P + D + E +APP + ++ Q FQP +TP LSSRFM WN+VG++K FN EE SI++EFH+TAIHH+ H+TN+ ++M D+S +VLAS + DP S++TC S D S EW+I M E + A+ G DW+A AT RL+RIFS GG Q +I ++PGP++ L+ H N L++ H GM LPG + + + + + + PLP + + L W+GFS EGTP MDS+G VR+ + FG W Q+ +T+S K KSD++++V + E Q+R I CKGA +P P P V ++PF +PLC+ TEK EE + LLS L+ + +E+ + L+KLFAL+ ++D E RALE+C++M + T+ LAI+YA + MQLA+RIS++ E+ QR + +H E+ ++ ++E +TN+ P+L K K ++ S G +GR NPF + P P KG VFD M+ K Q+S G + +P +K P + T V K +Q S S F LW E + Q+ E+S + ++W Q KE ++ R +P RK +L SK Sbjct: 3 SCSPLRYAHSEGLTSLCYDDKGKYILTCGSDGDVRIWEGAEDDDAISHGTGDKAFCVAYKNDRFYIATDA-NTVQAYTFPGGSPDGILARFTAPANHICINQMGTTLVAGSSDFTIKLVDISSGDTKKFEGHEAPVLSVALDPKE---EFLASSSCDGSVVIWRVENKEKVKKFQILPKVGDISLTKGLCRLCWEKNGQFLYVPLENEIQIY-NRNSWS---TTGSIQDSQFSGVYSVLDLSPDGTHLAAGCYDGHILIFDLKTKTCVDRFKHESGLSIMSLSWNPSNQTEIAFCDREGQLGLLSEINLKGGNQPA---KEQRVKET-----------LGIFEDDDDDAELVQASDEPSKEQIF--DEDSNDSTPASVLKPLDDDLASEDGEAPPVIPVQTRIIERPGFVPTPPQGAFQPGSTPKHLSSRFMMWNAVGIIKQFNTEEEESIDIEFHNTAIHHAMHLTNSAGYTMGDVSTEAVVLASPGEDSDP--SKLTCMHFGSWDNSKEWTIPMDDGEAIEALAIGEDWIAVATSGRLIRIFSLGGIQRDIFSIPGPVVCLSAHTNQLLIAYHRGMGLPGDQCLGVHLMTVEGATQIN----HQPLPLSHKSSLAWMGFSAEGTPFYMDSSGIVRMCNRRFGMSWVQVANTKSHTKGKSDNYWIVSVHENPQQLRCIPCKGARFPPVLPRPAVGILPFQVPLCQMNTEKSQYEEVFHRTQLLSSHLQFWNTIGYEYDTSIASELAKPSQEALMKLFALSARSDREFRALEVCEMMSEPHTLQLAIKYACRLKYMQLAERISEVVQRKSAEQAEEVEEEEEEVVHRVQRVHNHQNHVQEDEEMEEEDVEVDQENAETNSAGGPLLNLKAKSK--------NEVLSQSYGSSGRSNPF-KVLTPQKPEPT--KGTQVFDGMSKKKQTS--PGQVMLKNTRPVKAVKRTPQSQGKITSVKSTNEEDKQEESQKKSK-SAFDLWFEETKSQLMEELPEADEESLVQTAAERFRKIPKEERQIWIQKSKEGDNKKRKREEEEIPTRKVNPKLAGFAFSK 1014
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|927131962|ref|XP_013910237.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Thamnophis sirtalis]) HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0 Identity = 367/1092 (33.61%), Postives = 562/1092 (51.47%), Query Frame = 0 Query: 1 MSSAAPRGSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR-LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQ---------------DVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSN-MSKPHFRGE---DQERGVEPVDAPPTSGLLA---PVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSR-----ALRGSEPLAEVE----ETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQ-------------------------QRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKR-NLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDTVFDDM--------TLKSQSSRNRGSFGDRKF--KPGTGIKVKPAFGKQSTIVLKK-----------TVPA--------KDNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 MSS P MR+ HTEG++ + + GS +VTCGSDG+VR ++ +DDDDP S G++ + A+ + R A S NT+Q ++ EG +G++TRFT + + + DG + GS D VK+VD T + FRGH+AP+LSV+LDP ++ + S+SCDG+VR+W I+ +N L K ND+ AKS +A PK GK LAIP+E ++ +Y +E W L + + + VVAW+ G +LA+ + G + IW + K +GY +C LAWHP +LA D++G GL++ + VE + D +++ED E D AA ++D+D+ S R R+ G + EDD N + + D+E G + +D P LL+ PV G Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDTAIHH+ H+ N NH+MADLS ++LA E E+ AS++ C S D + EW+++M E++ A+C G+ W A AT LLR+F+ GG Q EI + PGP++++AGH L+V H G G + + +L K R+ G LP + + L W+GFS EGTP +DS G VR+L+ G WT +C+TR K KSDH+++VGI E Q+R ILCKGA +P T P P V+++PF LP C+ ATEKG +EE+ W+ L + G E V+ + Q L+K+FAL+ + E R +E+ +LM LAI+YAS +RR+ LAQ++S+LA + + E + ++ SHA ++ Q +E D+ N + EAK L G+ S++ + S NPF V ++ A + D++ T+ Q + N+ S + KP + AF + + +K TVP+ KDN P +GFQ+WL ENR + + + E++ I +G+ ++ L E++ Sbjct: 49 MSSQKP--------MRYGHTEGQTDVCFNDTGSCIVTCGSDGDVRFWENLDDDDPKSINVGEKAYSFALKNGRLITAVS-NNTVQIHTFPEGLPDGILTRFTTNANHVVFNADGSKVAVGSSDFLVKIVDVTDNSQQKTFRGHDAPVLSVSLDPTDT---YLASASCDGSVRVWKISEQNCEISWPLLQKCNDVINAKSLCRLAWQPKIGKLLAIPVEKTIKLYRRE-----TWAHELDLSDNFITQPLNVVAWSPCGQYLAAGSIGGYMVIWKVETQECLERVKHEKGYTVCGLAWHPKGGQLAYTDTEGNLGLLENVCDVERKKSIHKAPNSSIKSYDDLFDEDDKEDFLNRDFSEDDWGTK--AATNDEDEDDLKMASGRP--RNRGAIIEDDENSLDTGLLKANSVLDKEEGEDDLDNFPVQPLLSDQRPVYSGP--LPTPRQKPFQSGSTPAHLTHRFMMWNSLGIIRCYNDEQDNAIDVEFHDTAIHHAMHLPNNLNHTMADLSSEAILLACESTEE--LASKLHCIHFNSWDANKEWTVDMLQDEDIEAVCLGQGWAACATSSLLLRVFTIGGLQKEIFSFPGPVVSMAGHGEQLLVVFHKGTGFEGDQCLGIQLLELGKKKRQILHGE--SLPLSRKSYLAWVGFSAEGTPCYVDSEGIVRMLNRKHGNIWTPVCNTREHCKGKSDHYWIVGIHENPQQLRCILCKGARFPATLPRPAVSVLPFKLPFCQTATEKGQMEEQFWRSVLFHNYSDYLSQNGYEYDESVKGQAVQEQQNLLMKMFALSCTLEREFRCMELAELMTQNATSLAIKYASRSRRLILAQKLSELAAEKVSELASAEEYAEQEEEEEKQQPDFRNHLNAGYSNSPTEWSHA---REKNIQRQQNKETHDEDEEKVNVLQEAKSSSPTLHGNASASKSAVTASSNSIRVNPF---KVSSSQKDAFVHSPNILDNLTRLPKKNPTVNGQGAPNKKSQIIKPLTPKPKSKQPAATAFFQPRALTTEKKAREDREDKNDTVPSELQTVTENKDNK----RPKTGFQMWLEENRSSILSD-NPHFEETEIIKEGMVRYRGLSAEER 1102
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|585690153|ref|XP_006894404.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Elephantulus edwardii]) HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0 Identity = 355/1084 (32.75%), Postives = 552/1084 (50.92%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDT-QTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVE--------DNEEQDVEEEEDVTKTTHDEGDLDADQLA------ALMEDDDDNENSFSIRKIKRDTGFLSEDDSNM--------SKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKC----NLLSRALRGSEPLAEVEETQS-----RCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---------RAQSQMSHAD------------MFEDQGGDEQAE----EEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT--VFDDMTLKSQSS--RNRGS-------------------------FGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + + DG + AGS D VK+V+ + + FRGHEAP+LS++ DP++ F S+SCDG+VR+W I+ + L K ND+ AKS +A PK GK LAIP+E SV Y +E W+ + + + + +V W+ G +LA+ + G I +W+ K K +GY IC LAWHP+ +A D++G GL++ + + N + ++ + GD D + D +D+++ R + EDD N S R E+ V+ + + P P G Q PFQ +TP L+ RFM WNSVG+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA E D AS++ C +S D S EW ++MP E+V AIC G+ W AAAT LLR+F+ GG Q E+ +L GP++++AGH L++ H G G + + +L + ++ G PLP + + L W+GFS EGTP +DS G VR+L+ G G WT +CDTR K KSDH+++VGI E Q+R I CKG+ +P T P P +A++ F LP C+ ATEKG +EE+ W+ N L + E +TQ+ LIK+FAL+ K + E R +E+ LM + LAI+YAS +R++ LAQR+S+LA + E Q R QS + D E++ G+ E EE+ + NP + ++ +S +I +QG A NPF + P P+ + G + + D++ S+ S NR + F R + G VK K S+ +T A ++ P +GFQ+WL ENR + + +E++ I +G+ ++ L E++ + Sbjct: 3 ATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVIFNEDGAKIAAGSSDFLVKVVEVLDSSQQKTFRGHEAPVLSLSFDPKDV---FLASASCDGSVRVWQISDQTCSVSWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKFYRRE-AWS---NQFDLSDDFISQTLNIVTWSPCGQYLAAGSINGSIIVWNVETKDCLERVKHEKGYSICGLAWHPTCGRIAYTDAEGNLGLLENVCDLSGKKSSNKVSNRVEKDYDDLFDGDDASNAGDFLNDNSVETPFSKGITNDGEDDDDLMLTSSRHRLRSHILEDDENSVDVTLLKNSSSLLRDEEDGNQVDNIRSLPLKTSQKPFYDGP--MPTPRQKPFQSGSTPLHLTHRFMMWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTVADLSHEAILLACEGT--DELASKLHCLHFSSWDSSKEWMVDMPEHEDVEAICLGQGWAAAATSTLLLRLFTIGGVQKEVFSLLGPVVSMAGHGEQLLIVYHRGTGFDGDQCLGVQLLELGRKKKQILHGD--PLPLSKKSYLAWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPVCDTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPALAILSFKLPYCQTATEKGQMEEQFWRSVMFHNYLDYLAKNDYEYKESTKTQAVREQQELLIKMFALSCKLEREFRCVELADLMTQNAVSLAIKYASRSRKLILAQRLSELAMEKTAESAATQEDEEEEEDYRKQSNADNCDTVSEWNQPRVRNQVEEEDGEHSGEVDEVEEKPEIRKTGQNPFSKNANSSDV--PANKSGAVISSNQGRA--NPFKVSASPKEPAVLVNTGRSTNILDNINKSSKKSIVLNRSANNEKSPVIKPLIPKPKSKQASAASYFQKRNSQAGKVDDVKEETPKISS---SETPVASPQNTESPRPRTGFQMWLEENRNNILSDNPDFSEEADIIKEGMLRFRVLSAEERKAW 1065
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1139847198|ref|XP_019919679.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X2 [Crassostrea gigas]) HSP 1 Score: 559.681 bits (1441), Expect = 1.108e-180 Identity = 337/949 (35.51%), Postives = 511/949 (53.85%), Query Frame = 0 Query: 11 TLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPS-KYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPH--FRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALR---------GSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLM-DAATIGLAIRYASSNRRMQLAQRISKLANDALQEE------------QEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGR-NPFARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKP 933 + S +R+AH+EG +SL Y G ++TCGSDG+VR+++G +DDD ISH GD+ VA ++RF++A NT+Q Y+ G +G++ RFTA + ++ G L+AGS D T+KLVD + F GHEAP+LSVALDP+E EF SSSCDG+V IW + + +++ L K D+S K + G++L +P+E+ + IY + W+ T S + + V+ + DG LA+ G I I+D K+ K G I L+W+PS + E+A D +G GL+ ++ N+ +E+ V +T L +DDDD E + + ++ F ++DSN S P + D + E +APP + ++ Q FQP +TP LSSRFM WN+VG++K FN EE SI++EFH+TAIHH+ H+TN+ ++M D+S +VLAS + DP S++TC S D S EW+I M E + A+ G DW+A AT RL+RIFS GG Q +I ++PGP++ L+ H N L++ H GM LPG + + + + + + PLP + + L W+GFS EGTP MDS+G VR+ + FG W Q+ +T+S K KSD++++V + E Q+R I CKGA +P P P V ++PF +PLC+ TEK EE + LLS L+ + +E+ + L+KLFAL+ ++D E RALE+C++M + T+ LAI+YA + MQLA+RIS++ E+ QR + +H E+ ++ ++E +TN+ P+L K K ++ S G +GR NPF + P P KG VFD M+ K Q+S G + +P +K P Sbjct: 3 SCSPLRYAHSEGLTSLCYDDKGKYILTCGSDGDVRIWEGAEDDDAISHGTGDKAFCVAYKNDRFYIATDA-NTVQAYTFPGGSPDGILARFTAPANHICINQMGTTLVAGSSDFTIKLVDISSGDTKKFEGHEAPVLSVALDPKE---EFLASSSCDGSVVIWRVENKEKVKKFQILPKVGDISLTKGLCRLCWEKNGQFLYVPLENEIQIY-NRNSWS---TTGSIQDSQFSGVYSVLDLSPDGTHLAAGCYDGHILIFDLKTKTCVDRFKHESGLSIMSLSWNPSNQTEIAFCDREGQLGLLSEINLKGGNQP---AKEQRVKET-----------LGIFEDDDDDAELVQASDEPSKEQIF--DEDSNDSTPASVLKPLDDDLASEDGEAPPVIPVQTRIIERPGFVPTPPQGAFQPGSTPKHLSSRFMMWNAVGIIKQFNTEEEESIDIEFHNTAIHHAMHLTNSAGYTMGDVSTEAVVLASPGEDSDP--SKLTCMHFGSWDNSKEWTIPMDDGEAIEALAIGEDWIAVATSGRLIRIFSLGGIQRDIFSIPGPVVCLSAHTNQLLIAYHRGMGLPGDQCLGVHLMTVEGATQIN----HQPLPLSHKSSLAWMGFSAEGTPFYMDSSGIVRMCNRRFGMSWVQVANTKSHTKGKSDNYWIVSVHENPQQLRCIPCKGARFPPVLPRPAVGILPFQVPLCQMNTEKSQYEEVFHRTQLLSSHLQFWNTIGYEYDTSIASELAKPSQEALMKLFALSARSDREFRALEVCEMMSEPHTLQLAIKYACRLKYMQLAERISEVVQRKSAEQAEEVEEEEEEVVHRVQRVHNHQNHVQEDEEMEEEDVEVDQENAETNSAGGPLLNLKAKSK--------NEVLSQSYGSSGRSNPF-KVLTPQKPEPT--KGTQVFDGMSKKKQTS--PGQVMLKNTRPVKAVKRTP 908
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|975108640|ref|XP_015269826.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Gekko japonicus]) HSP 1 Score: 564.688 bits (1454), Expect = 3.328e-180 Identity = 315/828 (38.04%), Postives = 476/828 (57.49%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDT-QTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVW----TRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTH-------DEGDLDAD--------QLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNM---------SKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLA 803 MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + AAS N +Q ++ +G +G++TRFT + +A + DG + AGS D VK+V+ + + FRGH+AP+LSV+ DP+++ F S+SCDG+VR+W IA + + L K ND+ AKS +A PK GK+LAIP+E V +Y + D W + + +S P + VVAW+ G F+A+ + G I +W+ + K +GY IC LAWHP ++A D++G GL++ + D ++ + + +K +E L+ D + ED+DD+ S R R+ G + EDD N S P +GE++++ P PP S P G Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+IEVEFHDTAIHH+ H+ N+ NH+MADLS ++LA E E+ S++ C S D + EW+++MPP E++ AIC G+ W A AT L+R+F+ GG Q E+ +LPGP++++AGH L+V H G G + + +L K R+ G PLP + + L W+GFS EGTP +DS G VR+L+ G G WT +CDTR K KSDH ++VGI E Q+R I CKGA +P T P P VA++PF LP C+ AT+KG +EE+ W+ L L S+ E +E+ Q L+K+FAL+ + E R +E+ +LM + LA++YAS +R++ LAQR+S+LA Sbjct: 8 MRYGHTEGHTDVCFNDAGSCIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSFALKNGKLITAAS-NNAVQIHTFPDGVPDGILTRFTMNANHVAFNADGSKVAAGSSDFLVKIVEVADSSQQKTFRGHDAPVLSVSFDPQDA---FLASASCDGSVRVWKIAEQICEKSWPLLQKCNDVVDAKSICRLAWQPKKGKFLAIPVEKVVKLY-RRDTWEQQFDLSDNFISQP-------LNVVAWSPCGQFVAAGSVGGCIVVWNVDTQECLERVKHEKGYTICGLAWHPEGSQVAYTDTEGNLGLLENVCGA-DRKQSNTKASAPASKDYDDLFDEDDNEDFLNRDFIEPQSSPKAVTNYEDEDDDLTVASGRP--RNRGAIIEDDENSIDLGLLKASSAPDKQGEEEDQESLP-PVPPQSSTQRPFYDGP--VPTPRQKPFQSGSTPVHLTHRFMVWNSIGIIRCYNDEQDNAIEVEFHDTAIHHAMHLPNSLNHTMADLSSEAILLACESTEE--LVSKLHCIHFNSWDSNKEWTVDMPPDEDIEAICLGQGWAACATSALLVRVFTVGGVQKEVFSLPGPVVSVAGHGEQLLVVFHRGTGFDGDQCLGIQLVELGKKKRQILHGD--PLPLSWKSYLTWVGFSAEGTPSYVDSKGVVRMLNRGLGNTWTPVCDTREHSKGKSDHCWIVGIHESPQQLRCIPCKGAKFPPTLPRPAVAVLPFKLPFCQTATDKGQMEEQFWRSVLFHNYLEYLSQNGYECDESAKSRASQEQQNLLMKMFALSCTLEREFRCMELAELMTQNAMSLAVKYASRSRKLNLAQRLSELA 813
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|529446720|ref|XP_005243064.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Falco peregrinus]) HSP 1 Score: 563.918 bits (1452), Expect = 3.800e-180 Identity = 364/1098 (33.15%), Postives = 561/1098 (51.09%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHP-KGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLI----------DKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDD--------------NENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWK----CNLLSRALRGSEPLAEVEETQS-----RCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQ------EEQEQQRAQ------------SQMSHADMFEDQ--------GGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS------------------------------------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIK-GLEMWKQLKKEDK 1003 +T MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NT+Q ++ EG +G++TRFT + + + DG + AGS D VK+V+ T + K FRGH+AP+LS++ DPR+ + S+SCDG+VR+W IA + L K ND+ +AKS + P GK LAIP++ V +Y + W ++L + + + VVAW+ G +LA+A+ G I +W+ + + + Y IC LAWHP ++A D++G GL+ DK+ + + D+ + ED + D + + A ED+DD ++NS I IK ++ L ++D +DQ G A P+S G P Q Q PFQ +TP L+ RFM WNSVG+++C+N+ ++N+I+VEFHDT+IHH+ H+ N+ NH+MADLS ++LA E E+ AS++ C +S D + EW+++MP E++ A+C G+ W A AT L+R+F+ GG Q EI +LPGP++++AGH LMV H G G + + +L K + G PL + L W+GFS EGTP +DS G VR+L+ G G W +C+TR K +SDH+++VGI E Q+R I CKGA +P T P P VA++PF LP C+ TEKG +EE+ W+ N + L+ + E ++QS L+KLFAL+ K + E R +E+ LM + LAI+YAS +R++ LAQR++++A + + E++E R SQ+ ++ +DQ G E+AEE E P NP + + + +S I+ SQG NPF K PN + + V D M+ K+ T + A KQ+ V+K +P K QAL+ P +GFQ+WL ENR + + D+ + A IK G+ ++ L E++ Sbjct: 3 STQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSITVGEKAYSCALKNGKLITAVSN-NTVQIHTFPEGAPDGILTRFTMNANHVIFNSDGTKIAAGSSDFMVKVVEVTDSSKQKTFRGHDAPVLSLSFDPRDV---YLASASCDGSVRVWKIADQTCTTSWPLLQKCNDVISAKSICRLGWQPGSGKLLAIPVDKVVKLY-RRGTWD---SQLDLSHKSITQSLNVVAWSPCGQYLAAASVDGNILVWNVETQECIERMQHEKNYTICGLAWHPKHKQIAYADTEGSLGLLENIGDGKKPNDKVAGAKTKDYNDLFDGEDDNCSNGDMIEPQSSPKAGANEDNDDLIPTLGLLRRAIIDDDNSLDIGMIKANSSLLEKEDD---------DDQAGGFS---ALPSSTQRPFYDGPMPTPQ---QKPFQSGSTPAHLAHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATHLPNSLNHTMADLSTEAILLACESTEE--LASKLHCIHFSSWDTNKEWTVDMPEDEDIEAVCLGQGWAACATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMVIYHRGTGFDGDQCLGVQLMELGKKKEQILHGD--PLSLTKKSYLTWVGFSAEGTPCYVDSEGIVRMLNRGVGNTWIPVCNTREHCKGRSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFKLPYCQVMTEKGQMEEQYWRSVVFLNHVDYLLKNGYEIDENAKSQSVKEQQELLMKLFALSCKLEREFRCVELADLMTQNVVNLAIKYASRSRKLNLAQRLNEMAAEKVSELATAPEDEEDFRKHLNAGYRSSATEWSQLPVRNVQQDQEMEDAGETGAYEEAEETPEVQEQRP-NPFSKGVTSAEV--TTPKSAVIVSSSQGRV--NPF--KVSPNRKDPVVPSAN-VLDTMS---------------KYPKKTSLSSSRAVNKQNPPVIKPLIP-KPKSKQALAASFFQARTPTSSEKTVEEREEKTGNESHQVKVTAQQNTENGRPKTGFQMWLEENRANI--LTDNPDLNEAEVIKEGMSRFRILSSEER 1047 The following BLAST results are available for this feature:
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1959_size23944:11939..17030+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1959_size23944-snap-gene-0.6 ID=maker-scaffold1959_size23944-snap-gene-0.6|Name=wd repeat and hmg-box dna-binding protein 1|organism=Tigriopus kingsejongensis|type=gene|length=5092bp|location=Sequence derived from alignment at scaffold1959_size23944:11939..17030+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wd repeat and hmg-box dna-binding protein 1' has the following synonyms
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