glycine receptor subunit alpha-3, maker-scaffold2725_size12866-snap-gene-0.5 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 269.24 bits (687), Expect = 1.030e-89 Identity = 149/285 (52.28%), Postives = 174/285 (61.05%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-----------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L WD ++E ++V+VAKDLRMPQFEM KITT++CHE NHMGNYSCLVA FHLHRSIGFHLIQSYLPS LIVAISWVSFWMDVDCVPARVTLGVITLLT AIDVWMGVCTAFVFAALVEFT VNYLWRK+ P + FDA + N + +E++Q+ S ++ G+K DN SQ K NG L+ S R +AV+IDE+CRF FP+GF +FN +YW YY Sbjct: 113 LEWDPTHE-LSVTVAKDLRMPQFEMTKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWMDVDCVPARVTLGVITLLTVSSQVSGTSVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYLWRKDSDPYMKFDAMTALATIHAVNATSK---RNELVELDQLDSIET------------GIKNDGDND--------------SQ------KCNG-----------LRQKSKPPMNLRFQAVKIDEVCRFAFPVGFGIFNIIYWAYY 350
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 187.578 bits (475), Expect = 2.294e-56 Identity = 108/308 (35.06%), Postives = 165/308 (53.57%), Query Frame = 0 Query: 5 RSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPAR-------------------VTLGVITLLTAIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHF-------------DASEQ--APILQLHNEGEDVVMDQDHIEMEQV--RSSQSLNKPHFRGQGHAGLKTGSD----NGLGCLASGPAMTRSMSQPANLDFKINGMDV--IGRVTSPKLKASSIAARRNRH--RAVRIDEICRFVFPLGFALFNALYWTYY 268 R + + ++K+++MPQFE+ + S C E H+GNYSCL+A HL RS+GFH++QSY+P+ LIV ISWVSFWMDV+ V R + +++ + AID+WMG CTAF+FAAL+EFT VNY+WR+ + ++F D E P+ Q++ + E+ +++ ME+ +SS +N+ RGQ T + N L + N+D + + +V + + +K SSI+ H A++IDE RF+FPL F +FN LYW+YY Sbjct: 185 RWKDTKPIDISKEVKMPQFEISTVIPSICQETFHIGNYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYMWRRGKKKTMYFGIESGSRILENQKDKVEDFLVPLSQINEDNEESCNQANNVAMERAVKKSSTEVNR---RGQVLLMKPTTKNRRKSNFLWKXSKSQGDDAERRTALNMDVEQSNGEVRMLKSSSDDLIKESSISEFGLSHCKLALQIDECSRFIFPLCFCIFNLLYWSYY 489
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000009827 (supercontig:LSalAtl2s:LSalAtl2s639:754218:772660:1 gene:EMLSAG00000009827 transcript:EMLSAT00000009827 description:"maker-LSalAtl2s639-augustus-gene-6.12") HSP 1 Score: 169.088 bits (427), Expect = 4.663e-52 Identity = 102/268 (38.06%), Postives = 135/268 (50.37%), Query Frame = 0 Query: 20 MPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGV-------------------ITLLTAIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 MPQF ++++ T C E + +GNYSCLVA FHL RS+GFH++QSY+P+ LIV ISWVSFWMDVD VP R TLGV ++ + AIDVWMG CTAF+FAAL+EFT +NYLWR R +++ S L N +E + S N+ H S+ N+ F+ N ++ + +AR V+IDE CR +FPL F +FN YWTYY Sbjct: 1 MPQFTVEQVETDNCEESSLIGNYSCLVAKFHLSRSLGFHMVQSYVPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLTVSSKSAGLNAETPQVSYVKAIDVWMGACTAFIFAALIEFTIINYLWR---RTKINYSVSTAFDGFDLQN-----------LEKNEFPQSNGENQSEQTSNIHPPSTVASNR-------------------NIIFEKN-------ISYGRPDKGYTSAR----IGVKIDESCRILFPLNFLIFNIFYWTYY 224
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 124.405 bits (311), Expect = 1.068e-32 Identity = 91/295 (30.85%), Postives = 132/295 (44.75%), Query Frame = 0 Query: 3 WDRSNEEMAVSVAKDLRMPQ-FEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNP-RPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQ--GHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIA--ARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYREHE 272 W +N V + +L +P F++ T C + G+YSCL R + F+++ Y+P F+IV +SW+SFW+D VPARV+LG+ LL AIDVW GVC FVF+AL+E+ VNY R + R +A E+ E E + IE S P+ R + H+ L P M R P I ++ +++ + I+ +R + RA +ID I RF+FP FA FN LYW+YY E Sbjct: 237 WKETN---PVQMVANLSLPGGFKLDGFTNHNCDVKXATGSYSCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWIDHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNYASRSDAQRAAKQKEAKER--------ELEQCAFSTERIEDGGFPLSMVNRLPYDRTENMSHSHF----------LFKDPLMRRIEGAPM-----IPPGGLLQNEIPLQVRRNPISDWCQRFQFRAKKIDVISRFLFPSTFAFFNILYWSYYLTQE 505
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000009520 (supercontig:LSalAtl2s:LSalAtl2s612:286575:292619:1 gene:EMLSAG00000009520 transcript:EMLSAT00000009520 description:"maker-LSalAtl2s612-augustus-gene-3.13") HSP 1 Score: 105.145 bits (261), Expect = 1.679e-27 Identity = 66/202 (32.67%), Postives = 94/202 (46.53%), Query Frame = 0 Query: 12 VSVAKDLRMPQFEMQKITTSKCHEENHMGN-------------------YSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHF 175 V +DL +P+F+++ +TS C+ + + G+ YSCL R ++L+ Y+PS ++V ISWVSFW+D VPARV LGV TLLT AIDVW G C FVF+AL+EF VNY R + R ++ +N MD D I+ +Q S + H+ Sbjct: 37 VQFVQDLNLPRFKLESFSTSYCNSKTNTGSVILYTEFPIVKLVFFNSGEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVNRSLPPVAYTKAIDVWSGACVIFVFSALLEFAFVNYASRHDRR------KGRKSRSAMNYN------MDDDEIDYDQGLDCTSRIRSHY 226
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 106.301 bits (264), Expect = 3.227e-26 Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVN 121 WD+ EM + V K + +PQ E+ + C G ++CL F R +G++L +Y+P+ LIV +SW+SFW+ + VPARVTLGV +LLT AIDV+M CT FVF +L+E+ VN Sbjct: 153 FTWDK---EMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVN 289
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 102.834 bits (255), Expect = 4.179e-25 Identity = 78/281 (27.76%), Postives = 124/281 (44.13%), Query Frame = 0 Query: 15 AKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRP-ILHFDASEQAPILQLHNEGEDVV----MDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNG---LGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 +D ++PQF + T++ + G Y L +F L R+IG+ + Q+YLPS LIV +SWVSFW++ + ARV LG+ T+LT AID+++ +C FVFAAL+E+ + K P I+ +PI + N +D R ++S + R +KT S + +G + G A+ +S+ P++K +I ID+ R +FP+ F LFN YW +Y Sbjct: 245 VEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAASSS--SKQPEEDIIELQDLRMSPIPSIRNRFNSSSSSGKIDSATGFPPSFRINRSTHHHSIRPSRKNNIKTSSQHKKKLMGRIRKGSAIVKSI--------------------LPQIKDVNI-----------IDKYSRIIFPVSFLLFNVAYWCFY 492
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 101.679 bits (252), Expect = 6.493e-25 Identity = 76/273 (27.84%), Postives = 121/273 (44.32%), Query Frame = 0 Query: 8 EEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLTAIDVWMGVCTAFVFAAL--VEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKL----------KASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 E+ V V L +P+F +++ ++ C + G YSCL R ++LI Y+P ++V +SWVSFW+D + +PARV+LGV TLLT M T+ + A L V +T +W R SE +++ G+ V +S+ S + H + L+ GP + + + P + + + + ++ K + A+ RA RID I RF+FPL FA+FN YW YY Sbjct: 176 EKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLT-----MSTQTSGINAQLPPVSYTKAIDVWTGKKR------NSEYRNNIRVDPXGDLV-----------YKSTTSYPHQYNSMYPHHNI----------LSGGPPNSYNSATPCEIHXPVEHLQAYANSRNGEIDEKNCNWYCCKTRGLLAKFP-SRAKRIDVISRFIFPLIFAIFNLAYWLYY 415
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000001321 (supercontig:LSalAtl2s:LSalAtl2s1223:193582:196888:1 gene:EMLSAG00000001321 transcript:EMLSAT00000001321 description:"snap_masked-LSalAtl2s1223-processed-gene-2.46") HSP 1 Score: 84.7297 bits (208), Expect = 4.324e-19 Identity = 69/246 (28.05%), Postives = 99/246 (40.24%), Query Frame = 0 Query: 42 YSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 +S L L R +GFH+ QSY+PS + VAI+W+SF + D VP R+ L V TLLT A+D+W+ VC FVF++L E+ V YL ++ G +D D + + S L P N L ++ G M Q ++ M+ + PK K A I+ I + ++PL F FN YWTYY Sbjct: 144 FSGLGIRIELKRHLGFHITQSYIPSIIFVAIAWMSFHVPSDVVPGRMVLSVTTLLTLISMFNSVRSLTPQVSYMKALDLWVFVCLVFVFSSLAEYGFVLYLTSRS---------------------GWQKKVDAD---IRTISGSDRLVNPA--------------NFLRLISGG------MIQRTQKNYSTANMNGVVSKVMPKTK---------ERVAYSIEYIIKIIYPLAFFGFNYTYWTYY 336
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Match: EMLSAG00000000070 (supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-1 gene:EMLSAG00000000070 transcript:EMLSAT00000000070 description:"maker-LSalAtl2s100-snap-gene-5.24") HSP 1 Score: 78.1814 bits (191), Expect = 3.541e-17 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 0 Query: 8 EEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT 97 ++ ++V +++PQ E+ T C GN++CL F R +G++L +Y+P+ LIV +SW+SFW+ + ARVTLGV +LLT Sbjct: 132 DKTPLAVDNGIQLPQLELVSNDTGDCTSVYSTGNFTCLEVIFKFRRRLGYYLFHTYIPTCLIVMMSWISFWIKPEAXXARVTLGVTSLLT 221
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|56757652|sp|Q09453.2|GLRB4_CAEEL (RecName: Full=Glycine receptor subunit beta-type 4; Flags: Precursor) HSP 1 Score: 144.436 bits (363), Expect = 7.397e-39 Identity = 97/296 (32.77%), Postives = 134/296 (45.27%), Query Frame = 0 Query: 5 RSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQ-SLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAAR-----RNRHRAVRIDEICRFVFPLGFALFNALYWTYYREHEVTN 275 R N V V + +RMP ++ I ++ G +S VA FH+ R I H+IQSY+P+ LIV ISW SFW+DV+ VP RV+L + TLLT AIDVWMG C AFVF+A++EFT VNY R+ R ++ G + +Q H + Q R + N + L+ DN R M+Q + + R P K +I R NR A +ID R +FPL F +FN YW YY ++ +N Sbjct: 197 RWNGGNPVEVNRGIRMPDMHLKHIKFYTKRDKYATGIWSSAVAEFHVDREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPGRVSLSITTLLTLATQSSAARMALPQASDVKAIDVWMGTCMAFVFSAMIEFTVVNYCVRRKVRT-------------KIKPRG---LSEQVHDMVAQYREKKDKFNNGNCEISYEMALQPNEDNATVQRNFEKKEVREMNQASLF---------VRRSLLPTSKRKTIEDRINRVEENRKNAQKIDRYSRALFPLAFIIFNIFYWIYYLKYAGSN 467
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 140.969 bits (354), Expect = 1.435e-37 Identity = 93/281 (33.10%), Postives = 130/281 (46.26%), Query Frame = 0 Query: 11 AVSVAKDLRMPQFEMQ-KITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQ--VRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 AV VA+ L +PQF ++ + C + + G ++C+ FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVFAAL+E+ VN++ R+ H E + Q ME+ +R S+ +FRG G D G P S+ P + +P LK + RA RID I R VFP F +FN YW Y+ Sbjct: 209 AVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ-------------------HKEFMRLRRRQRRQRMEEDIIRESRF----YFRGYGLGHCLQARDGG-------PMEGSSIYSP--------------QPPTPLLKEGETMRKLYVDRAKRIDTISRAVFPFTFLVFNIFYWVVYK 445
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 139.428 bits (350), Expect = 5.771e-37 Identity = 100/289 (34.60%), Postives = 131/289 (45.33%), Query Frame = 0 Query: 12 VSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSD----NGLGCLASGPAMTRSMSQPANLDFKING---MDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY--REHE 272 V V K+L +P+F ++K T C+ + + G YSCL R ++LIQ Y+P ++V +SWVSFW+D VPARV+LGV TLLT AIDVW GVC FVF AL+EF VNY R S +A +H E M + ++EQ A L SD + A P + R P L+ ++ M R K S R+ R+ RID I R FPL FALFN +YW+ Y RE E Sbjct: 201 VQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASR---------SGSNKA---NMHKES----MKKKRRDLEQ-----------------ASLDAASDLLDTDSNATFAMKP-LVRHPGDPLALEKRLQCEVHMQAPKRPNCCKTWLSKFPTRQC-SRSKRIDVISRITFPLVFALFNLVYWSTYLFREEE 454
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 137.502 bits (345), Expect = 2.605e-36 Identity = 87/286 (30.42%), Postives = 131/286 (45.80%), Query Frame = 0 Query: 8 EEMAVSVAKDLRMPQFEMQKITTSK-CHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWR--KNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNR--HRAVRIDEICRFVFPLGFALFNALYWTYYR 269 E+ AV VA L +PQF +++ + C + + G ++C+ A FHL R +G++LIQ Y+PS LIV +SW+SFW+++D PARV LG+ T+LT AID+WM VC FVF+AL+E+ VN++ R K ++P+L L E E G+G + G CL + ++ + G + P + S R RA +ID+I R FP+ F +FN YW Y+ Sbjct: 200 EQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKSPMLNLFQEDE-------------------------AGEGRFNF-SAYGMGPACLQAKDGIS------------VKGANNSNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYK 447
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 137.502 bits (345), Expect = 2.947e-36 Identity = 87/286 (30.42%), Postives = 131/286 (45.80%), Query Frame = 0 Query: 8 EEMAVSVAKDLRMPQFEMQKITTSK-CHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWR--KNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNR--HRAVRIDEICRFVFPLGFALFNALYWTYYR 269 E+ AV VA L +PQF +++ + C + + G ++C+ A FHL R +G++LIQ Y+PS LIV +SW+SFW+++D PARV LG+ T+LT AID+WM VC FVF+AL+E+ VN++ R K ++P+L L E E G+G + G CL + ++ + G + P + S R RA +ID+I R FP+ F +FN YW Y+ Sbjct: 200 EQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKSPMLNLFQEDE-------------------------AGEGRFNF-SAYGMGPACLQAKDGIS------------VKGANNSNTTNPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYK 447
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 135.191 bits (339), Expect = 1.496e-35 Identity = 89/278 (32.01%), Postives = 128/278 (46.04%), Query Frame = 0 Query: 12 VSVAKDLRMPQFEM-QKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 V VA+ L +PQF + ++ C + + G ++C+ FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVFAAL+E+ VN++ R+ H + + N+ EDV + F G+ G+G T + PAN + P A +I ++ RA RID I R FPL F +FN YW Y+ Sbjct: 210 VQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ------HKEFLRLRRRQKRQNKEEDVTRES-----------------RFNFSGY---------GMGHCLQVKDGTAVKATPAN------------PLPQPPKDADAI-KKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYK 442
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 135.191 bits (339), Expect = 1.591e-35 Identity = 89/278 (32.01%), Postives = 128/278 (46.04%), Query Frame = 0 Query: 12 VSVAKDLRMPQFEM-QKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 V VA+ L +PQF + ++ C + + G ++C+ FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVFAAL+E+ VN++ R+ H + + N+ EDV + F G+ G+G T + PAN + P A +I ++ RA RID I R FPL F +FN YW Y+ Sbjct: 210 VQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ------HKEFLRLRRRQKRQNKEEDVTRES-----------------RFNFSGY---------GMGHCLQMKDGTAVKATPAN------------PLPQPPKDADAI-KKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYK 442
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 134.42 bits (337), Expect = 3.397e-35 Identity = 93/295 (31.53%), Postives = 138/295 (46.78%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSK-CHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGR------VTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 WD E+ AV VA L +PQF +++ + C + + G ++C+ A FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVF+AL+E+ VN++ R++ + +L F + H++ ++ G G + G+G PA L K +GM + G T+P K + RA RID + R FPL F +FN YW Y+ Sbjct: 192 FEWD---EKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQH-KELLRFQRRRR------------------HLKEDEA------------GDGRFSF---AAYGMG--------------PACLQAK-DGMAIKGNNNNAPTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITYK 434
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 134.035 bits (336), Expect = 5.288e-35 Identity = 88/278 (31.65%), Postives = 127/278 (45.68%), Query Frame = 0 Query: 12 VSVAKDLRMPQFEM-QKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 V VA+ L +PQF + ++ C + + G ++C+ FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVFAAL+E+ VN++ R+ H + + N+ EDV + F G+ G+G T + PAN + P +I ++ RA RID I R FPL F +FN YW Y+ Sbjct: 210 VQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ------HKEFLRLRRRQKRQNKEEDVTRES-----------------RFNFSGY---------GMGHCLQVKDGTAVKATPAN------------PLPQPPKDGDAI-KKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYK 442
BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 133.65 bits (335), Expect = 6.554e-35 Identity = 88/283 (31.10%), Postives = 137/283 (48.41%), Query Frame = 0 Query: 7 NEEMAVSVAKDLRMPQFEMQKITTSK-CHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYR 269 +E V VA+ L +PQF +++ + C + + G ++C+ FHL R +G++LIQ Y+PS LIV +SWVSFW+++D PARV LG+ T+LT AID+WM VC FVF+AL+E+ VN++ R++ + +L F + E D D ++VR S + F G D G + GP + + V+ + ++ +++ I RA +ID I R FPL F +FN YW Y+ Sbjct: 204 QDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQH-KELLRFRRKRKNKTEAFALEKFYRFSDTD----DEVRES----RLSFTAYGMGPCLQAKD---GVVPKGPN---------------HAVQVMPK-SADEMRKVFI------DRAKKIDTISRACFPLAFLIFNIFYWVIYK 452
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|646716017|gb|KDR19424.1| (Glycine receptor subunit alpha-3 [Zootermopsis nevadensis]) HSP 1 Score: 204.527 bits (519), Expect = 3.138e-61 Identity = 127/287 (44.25%), Postives = 148/287 (51.57%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W N V + K LRMPQFE+ KI S C E +GNYSCLVA FHL RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK P + S +A G+ V DQ E+ S+ ++ D+ LGC P T +M G T PK N+ RA RIDE+ RF FPL FA+FN YW+YY Sbjct: 40 LEWKTMN---PVIMGKGLRMPQFEIVKIAASDCQESFQIGNYSCLVAEFHLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYMWRKQPVEVFDKKKSPEA------VNGKAV--DQSP---EEPDSAVAVTVKK--------CARADDSMLGC---EPRTTHNMCA--------------GSETLPK----------NKIRARRIDELSRFCFPLTFAVFNLFYWSYY 277
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1339066656|ref|XP_023726328.1| (glycine receptor subunit alpha-3-like isoform X1 [Cryptotermes secundus] >gi|1339066658|ref|XP_023726335.1| glycine receptor subunit alpha-3-like isoform X1 [Cryptotermes secundus]) HSP 1 Score: 206.453 bits (524), Expect = 3.407e-61 Identity = 129/288 (44.79%), Postives = 151/288 (52.43%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFR-GQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W N V + K LRMPQFE+ KI S C E H+GNYSCLVA FHL RS+GFHLIQSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF+AL+EFT VNY+WRK IL D +++P + + + V +QS +P T D+ LGC + P +M GR T K K RA RIDE+ RF FPL FA+FN LYW+YY Sbjct: 113 LEWKTMN---PVIMGKGLRMPQFEIVKIAASDCQESFHIGNYSCLVAEFHLSRSVGFHLIQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFSALLEFTFVNYMWRKQSVEIL--DGKKKSP---------------EAVNGKAV--AQSSEEPDLAVAVTMKKCATTDDSVLGCESRVP---HNMCP--------------GRETLTKYKV----------RARRIDELSRFCFPLIFAVFNLLYWSYY 351
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1227976702|ref|XP_021919860.1| (glycine receptor subunit alpha-3-like isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 207.608 bits (527), Expect = 7.236e-61 Identity = 125/287 (43.55%), Postives = 145/287 (50.52%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W N V + K LRMPQFE+ KI S C E +GNYSCLVA FHL RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK P + S +A ++ + D QS +P D+ LGC P T +M G T PK N+ RA RIDE+ RF FPL FA+FN YW+YY Sbjct: 183 LEWKTMN---PVIMGKGLRMPQFEIVKIAASDCQESFQIGNYSCLVAEFHLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYMWRKQPVEVFDKKKSPEA----VNGKAVD----------------QSPEEPDSAVAVTVKCARADDSMLGC---EPRTTHNMCA--------------GSETLPK----------NKIRARRIDELSRFCFPLTFAVFNLFYWSYY 419
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1227976696|ref|XP_021919857.1| (glycine receptor subunit alpha-3-like isoform X1 [Zootermopsis nevadensis] >gi|1227976698|ref|XP_021919858.1| glycine receptor subunit alpha-3-like isoform X1 [Zootermopsis nevadensis] >gi|1227976700|ref|XP_021919859.1| glycine receptor subunit alpha-3-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 204.142 bits (518), Expect = 1.987e-59 Identity = 127/287 (44.25%), Postives = 148/287 (51.57%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W N V + K LRMPQFE+ KI S C E +GNYSCLVA FHL RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK P + S +A G+ V DQ E+ S+ ++ D+ LGC P T +M G T PK N+ RA RIDE+ RF FPL FA+FN YW+YY Sbjct: 183 LEWKTMN---PVIMGKGLRMPQFEIVKIAASDCQESFQIGNYSCLVAEFHLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYMWRKQPVEVFDKKKSPEA------VNGKAV--DQSP---EEPDSAVAVTV--------KKCARADDSMLGC---EPRTTHNMCA--------------GSETLPK----------NKIRARRIDELSRFCFPLTFAVFNLFYWSYY 420
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1228380168|ref|XP_021951531.1| (glycine receptor subunit alpha-2-like [Folsomia candida]) HSP 1 Score: 197.978 bits (502), Expect = 8.885e-57 Identity = 124/283 (43.82%), Postives = 155/283 (54.77%), Query Frame = 0 Query: 7 NEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-----------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKN-PRPILHFDA--SEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRN-RHRAVRIDEICRFVFPLGFALFNALYWTYY 268 N E +S+ K L M QFE+QKI SKCHEE +GNYSCLVA FHL+R +GFHL+QSYLP+ L+V ISWVSFWMDV+ VP RVTLG+ TLLT A+DVWMG CTAFVF AL+EFT VNYLWRK R A S A +Q +N E++ + M Q++ N + + LG + QP + G++V+ AS + + N + RA IDE CR VFPL F LF LYW+YY Sbjct: 194 NPEEPISI-KGLGMSQFELQKIVPSKCHEEFQIGNYSCLVAEFHLYRLLGFHLVQSYLPTILMVVISWVSFWMDVNSVPGRVTLGITTLLTVSSKATNQGAIESSYIKALDVWMGSCTAFVFLALLEFTVVNYLWRKECSRNWQRVKAQHSCSADFMQ-NNHSENIGRSPSNHSMLQMKEKPLGNSIEMSVSNFVD-RNDKSHYLGVV----------DQPV---IPVEGINVVEPF------ASVMNCQPNYKERAKSIDETCRIVFPLSFTLFIILYWSYY 454
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1215270111|gb|OXA56423.1| (Glycine receptor subunit beta-type 4 [Folsomia candida]) HSP 1 Score: 192.971 bits (489), Expect = 1.304e-56 Identity = 124/294 (42.18%), Postives = 155/294 (52.72%), Query Frame = 0 Query: 7 NEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT----------------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKN-PRPILHFDA--SEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRN-RHRAVRIDEICRFVFPLGFALFNALYWTYY 268 N E +S+ K L M QFE+QKI SKCHEE +GNYSCLVA FHL+R +GFHL+QSYLP+ L+V ISWVSFWMDV+ VP RVTLG+ TLLT A+DVWMG CTAFVF AL+EFT VNYLWRK R A S A +Q +N E++ + M Q++ N + + LG + QP + G++V+ AS + + N + RA IDE CR VFPL F LF LYW+YY Sbjct: 20 NPEEPISI-KGLGMSQFELQKIVPSKCHEEFQIGNYSCLVAEFHLYRLLGFHLVQSYLPTILMVVISWVSFWMDVNSVPGRVTLGITTLLTVSSKATRGSSFLWFGSVDQGAIESSYIKALDVWMGSCTAFVFLALLEFTVVNYLWRKECSRNWQRVKAQHSCSADFMQ-NNHSENIGRSPSNHSMLQMKEKPLGNSIEMSVSNFVD-RNDKSHYLGVV----------DQPV---IPVEGINVVEPF------ASVMNCQPNYKERAKSIDETCRIVFPLSFTLFIILYWSYY 291
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1229990096|ref|XP_022176180.1| (glycine receptor subunit beta-type 4-like isoform X2 [Myzus persicae]) HSP 1 Score: 190.66 bits (483), Expect = 4.757e-55 Identity = 118/290 (40.69%), Postives = 142/290 (48.97%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYREH 271 L W ++ V +AK LRMPQFE+ I S C E +GNYSCLVA F+L RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK IL +I E V S KP+ L S P + S V+ ++ + A S +A N A +IDE R +FP+ F FNALYW YY ++ Sbjct: 113 LEWKNTD---PVLMAKGLRMPQFEIVNIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLRPDILR------------------------NILTEPVNGGTSGTKPYDEN----------------LPSSPVIPVS---------------VVKKILQQEC-AYSTSAETNTVLARKIDEYSRLLFPVAFIAFNALYWPYYLQN 343
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|985420883|ref|XP_015375849.1| (PREDICTED: glycine receptor subunit beta-type 4-like [Diuraphis noxia]) HSP 1 Score: 190.274 bits (482), Expect = 4.861e-55 Identity = 120/290 (41.38%), Postives = 143/290 (49.31%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYYREH 271 L W ++ V +AK LRMPQFE+ I S C E +GNYSCLVA F+L RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK IL +I E V G AG K +N S P + S V+ ++ + A S AA N A +IDE R +FP+ F FNALYW YY ++ Sbjct: 113 LEWKNTD---PVLMAKGLRMPQFEIVDIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLRPDILR------------------------NILTEPVNG------------GTAGTKPYDENR----PSSPVIPVS---------------VVKKILQQEC-AYSTAAETNTVLARKIDEYSRLLFPVAFIAFNALYWPYYLQN 343
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1028713732|ref|XP_016661210.1| (PREDICTED: glycine receptor subunit beta-type 4-like [Acyrthosiphon pisum]) HSP 1 Score: 190.274 bits (482), Expect = 6.638e-55 Identity = 119/287 (41.46%), Postives = 142/287 (49.48%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W ++ V +AK LRMPQFE+ I S C E +GNYSCLVA F+L RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK IL +I E V G AG K+ +N L S P + S V+ ++ + A S + N A +IDE R +FP+ F FNALYW YY Sbjct: 113 LEWKNTD---PVLMAKGLRMPQFEIVDIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLRPDILR------------------------NILTEPVNG------------GTAGTKSYDEN----LPSSPVIPVS---------------VVKKILQQEC-AYSTSVETNTVLARKIDEYSRLLFPVAFIAFNALYWPYY 340
BLAST of glycine receptor subunit alpha-3 vs. nr
Match: gi|1233179052|ref|XP_022190972.1| (glycine receptor subunit beta-type 4-like [Nilaparvata lugens]) HSP 1 Score: 189.504 bits (480), Expect = 1.259e-54 Identity = 114/287 (39.72%), Postives = 141/287 (49.13%), Query Frame = 0 Query: 1 LNWDRSNEEMAVSVAKDLRMPQFEMQKITTSKCHEENHMGNYSCLVAAFHLHRSIGFHLIQSYLPSFLIVAISWVSFWMDVDCVPARVTLGVITLLT-------------------AIDVWMGVCTAFVFAALVEFTCVNYLWRKNPRPILHFDASEQAPILQLHNEGEDVVMDQDHIEMEQVRSSQSLNKPHFRGQGHAGLKTGSDNGLGCLASGPAMTRSMSQPANLDFKINGMDVIGRVTSPKLKASSIAARRNRHRAVRIDEICRFVFPLGFALFNALYWTYY 268 L W N V + K LRMPQFE+ +I S C E +GNYSCLVA F+L RS+GFHL+QSYLP+ LIV ISWVSFWMDVD VP R TLGV TLL AIDVWMG CTAFVF AL+EFT VNY+WRK + D ++ V P G A + S G+ A G +T + + + V+ +V + + +N A +IDE R FPL FA+FN YW+YY Sbjct: 113 LEWKTMN---PVIMGKGLRMPQFEIVEIIPSDCQESFQIGNYSCLVAEFYLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYMWRK---------------------------LSPDILKRTFV--------PEAASNGEAPI---SKQGVSPSAQGDTITTTTQEAI-------AVTVVRKVILAENDPTGRITNKNMLMARQIDEYSRLFFPLAFAVFNVAYWSYY 351 The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glycine receptor subunit alpha-3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glycine receptor subunit alpha-3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2725_size12866:6862..11916- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2725_size12866-snap-gene-0.5 ID=maker-scaffold2725_size12866-snap-gene-0.5|Name=glycine receptor subunit alpha-3|organism=Tigriopus kingsejongensis|type=gene|length=5055bp|location=Sequence derived from alignment at scaffold2725_size12866:6862..11916- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glycine receptor subunit alpha-3' has the following synonyms
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