nephrin- partial, maker-scaffold273_size229271-snap-gene-1.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000006805 (supercontig:LSalAtl2s:LSalAtl2s381:99810:264138:-1 gene:EMLSAG00000006805 transcript:EMLSAT00000006805 description:"maker-LSalAtl2s381-augustus-gene-2.12") HSP 1 Score: 125.946 bits (315), Expect = 1.554e-33 Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = 0 Query: 58 QNVLGVVGYPSELECDIQPKAPHDQLLLVLWYK-EGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKM-SSTLGPYKVGQELIATCVTS 219 +NV G++G ++L CD P + LLLV+W+K E + PIY++D RG ++ + H++D G RA + D P + L+I +LR +D G ++CR DF+ +PT+NYK+NLNI++PP KP++H+E G + + GPY G EL TC TS Sbjct: 8 RNVSGILGQSTQLPCDTNPSSSDHPLLLVIWFKDEATDDPIYSYDVRGN-NVEIGRHWNDAVNLGARAHFE-------EKDKPIST------LVIDDLREKDGGTYRCRVDFRHAPTKNYKINLNIIIPPGKPLIHNERGILLEENKFGPYNEGSELFLTCSTS 157
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000003321 (supercontig:LSalAtl2s:LSalAtl2s182:139693:301797:1 gene:EMLSAG00000003321 transcript:EMLSAT00000003321 description:"maker-LSalAtl2s182-augustus-gene-3.15") HSP 1 Score: 116.701 bits (291), Expect = 2.693e-30 Identity = 56/152 (36.84%), Postives = 93/152 (61.18%), Query Frame = 0 Query: 59 NVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRK-MSSTLGPYKVG 209 +V ++G ++L CDI P+ HD + LVLW+K+ P+Y+ D RGK L+ A+++SD GQR+ K S L+I+++ D GI+KCR D++ SPT+N K+NL+I+VPP++PV+ D +G + + +GP+++G Sbjct: 3 HVEAILGRSAQLPCDILPRDSHDDVYLVLWFKDDNTKPMYSLDVRGK-PLSQASYWSDSSSLGQRSSFK--------------SNIYPNSLIIEKINLGDSGIYKCRVDYRNSPTKNVKLNLSIIVPPEEPVIRDGDGNQILGYEVGPHEIG 139
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000005822 (supercontig:LSalAtl2s:LSalAtl2s314:64423:95669:1 gene:EMLSAG00000005822 transcript:EMLSAT00000005822 description:"maker-LSalAtl2s314-augustus-gene-1.7") HSP 1 Score: 107.457 bits (267), Expect = 1.105e-27 Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 0 Query: 58 QNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENG-RKMSSTLGPYKVGQELIATCVTSGGK 222 Q V + G +L C+I D++ LVLW+K + PIYT+D RGK S A+H+SD+ V RA + GD RL++ + +D+G++KCR D+K +PT+ ++L ++VPP+KP V E+G ++ LGPY+VG ++ C + GG+ Sbjct: 4 QTVSAIQGSSVDLPCNISAPKQGDKVRLVLWFKNDSSLPIYTYDTRGK-SYEEASHWSDDKVLMGRAFFR--------GD------HHPGRLVVDNVHGDDEGLYKCRVDYKIAPTKITNVHLKVIVPPEKPKVTTESGDEEIRLKLGPYRVGDNVVLKCSSLGGR 154
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000010097 (supercontig:LSalAtl2s:LSalAtl2s665:79099:82270:1 gene:EMLSAG00000010097 transcript:EMLSAT00000010097 description:"snap_masked-LSalAtl2s665-processed-gene-1.6") HSP 1 Score: 92.8189 bits (229), Expect = 1.497e-24 Identity = 51/103 (49.51%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 57 SQNVLGVVGYPSELECDIQPKAPH-DQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPED 158 S V+GVVG+P+ LECD++ H DQLLLVLWYKEG SPIYTFDAR SL + HYSD+ V QR +KV + KA L I +R ED Sbjct: 31 SNQVVGVVGFPASLECDVRSAIEHGDQLLLVLWYKEGQASPIYTFDARDGGSLTSSRHYSDDTVLAQRGRMKVT--------------SQKAILTIDPVRRED 119
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000011552 (supercontig:LSalAtl2s:LSalAtl2s7:1384693:1561256:-1 gene:EMLSAG00000011552 transcript:EMLSAT00000011552 description:"maker-LSalAtl2s7-augustus-gene-15.10") HSP 1 Score: 98.5969 bits (244), Expect = 5.627e-24 Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 0 Query: 55 EFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGGK 222 E V+ V G + L CDI+P +Q Y IY++D+R + L +SD+ FG RA + T A L I+++R E+ ++CR DFK +PT+N +NL ++VPP P + +ENG ++ GPY+VG +I CVT+GG+ Sbjct: 11 EVENKVIAVEGGIAYLPCDIRPPNSEEQKK----YSHFILLQIYSYDSRSSSKLT-GRRWSDDRGFGARAYFDI--------------DTYPALLKIEDVRREETQSYRCRVDFKSAPTRNSLINLTVIVPPSTPTILNENGEDINFIAGPYEVGSTVILKCVTNGGR 159
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000006645 (supercontig:LSalAtl2s:LSalAtl2s367:2485:101243:-1 gene:EMLSAG00000006645 transcript:EMLSAT00000006645 description:"augustus_masked-LSalAtl2s367-processed-gene-1.0") HSP 1 Score: 95.9005 bits (237), Expect = 4.298e-23 Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 0 Query: 58 QNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVAT------HYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTL--GPYKVGQELIATCVTSGGKLL 224 + V V G +L CDI A D + LVLWY++ +PIY++D+R T + +S+ FG RA +V + A L + ++ D G + CR DF++SPT + + L+I+VPP++P++ D+ GR++ T+ GP++ G L C GG+ L Sbjct: 5 KRVTTVEGGRVDLPCDITTPAIGDSVYLVLWYRKDSGTPIYSYDSRQTTEKIIQDVPERPDLWSEPSAFGDRAHFRV--------------SSNPATLSVTDVHRLDAGTYTCRVDFRQSPTIYHHITLDIIVPPQQPLILDDRGREVKGTMGIGPFREGDSLTLECHVPGGEPL 165
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000002420 (supercontig:LSalAtl2s:LSalAtl2s145:660235:748689:-1 gene:EMLSAG00000002420 transcript:EMLSAT00000002420 description:"maker-LSalAtl2s145-snap-gene-7.5") HSP 1 Score: 95.1301 bits (235), Expect = 7.821e-23 Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 0 Query: 46 FVLQEEVESEFSQNVLGVVGYPSELECDIQPKAPHDQ-LLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLK---VPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGGK 222 FV QE + + VVG + L C+I AP D LLVLWY+ PIY+FD R T+ H+S++ FG RA+ + + PG + + L+I ++ ED G +KCR DF++S T++ ++L I+ P P + ++NG + +GP+ +G+ LI C G Sbjct: 85 FVAQE-------KEIYTVVGASAHLPCNI--SAPDDDGALLVLWYRNFDAQPIYSFDNRFSTT----KHWSEDQSFGPRALFRDNSIYPG-------------ILSELIISNVQFEDGGYYKCRVDFRRSQTRSETLHLRIIEEPDIPSIVNQNGTALMGEIGPFALGEALILLCTVDRGN 239
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000005420 (supercontig:LSalAtl2s:LSalAtl2s2929:4307:11321:-1 gene:EMLSAG00000005420 transcript:EMLSAT00000005420 description:"maker-LSalAtl2s2929-snap-gene-0.3") HSP 1 Score: 85.8853 bits (211), Expect = 3.715e-21 Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = 0 Query: 70 LECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGT--LKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTL-GPYKVGQELIATCVTSG 220 + CD+ P P D L+L+YK+ Y +PIY+FD RG + H+ D G R G S ++G + + L I+ L ED+G ++CR DF+++PT+N ++ LN++VPP P+++ + L P + L+ C T G Sbjct: 2 IPCDLTPPFPSDSPHLILFYKDIYGTPIYSFDMRGGEN--GGHHWVDNRTLGPRGHFSFHETGSYS-----ETGAPLIASFLEIEPLVIEDRGTYRCRVDFREAPTKNTRIQLNLIVPPGAPLLYTGTETPLLDGLTNPVREDSTLVLVCETIG 148
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000007485 (supercontig:LSalAtl2s:LSalAtl2s42:8987:332231:1 gene:EMLSAG00000007485 transcript:EMLSAT00000007485 description:"augustus_masked-LSalAtl2s42-processed-gene-3.5") HSP 1 Score: 87.0409 bits (214), Expect = 5.398e-20 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 0 Query: 59 NVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLA---VATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGG 221 +V V G + L C+I P P+D++ LVLWYK+G+ P+++FD R +T + + + D RA L A L + + ED G ++CR DFK SPT+ +K+NL+++VPP ++ DE G + ++ L+ TC GG Sbjct: 31 SVQSVAGMLTNLPCNITPTIPNDKVNLVLWYKDGFGKPLFSFDLRDETPDSDGKIWANADDGNQDSYRAQLHT-------------RSAPTAVLSLLGVTDEDAGTYRCRVDFKHSPTRYWKVNLSVIVPPISSLILDEKGVVVXXXXXXXELST-LVLTCDVFGG 182
BLAST of nephrin- partial vs. L. salmonis genes
Match: EMLSAG00000006581 (supercontig:LSalAtl2s:LSalAtl2s361:132689:273669:-1 gene:EMLSAG00000006581 transcript:EMLSAT00000006581 description:"maker-LSalAtl2s361-snap-gene-2.29") HSP 1 Score: 75.485 bits (184), Expect = 3.077e-16 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 0 Query: 111 ATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTL-GPYKVGQELIATCVTSGGK 222 A H+S + FG RA +V G L+I +R ED+G+++CR D++ SPT+N K+NL ++VPP P + G+ ++ + GPY G EL C GG+ Sbjct: 2 AKHWSAKHPFGNRAYFRV--------------GNDPTFLLIDAIRLEDEGVYRCRVDYRNSPTRNIKLNLTVVVPPDAPRLTGPRGKDVNGAVAGPYNQGDELQLICDVVGGR 100
BLAST of nephrin- partial vs. nr
Match: gi|1325314795|ref|XP_023339082.1| (nephrin-like, partial [Eurytemora affinis]) HSP 1 Score: 152.14 bits (383), Expect = 4.915e-40 Identity = 76/176 (43.18%), Postives = 113/176 (64.20%), Query Frame = 0 Query: 51 EVESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQ--RAVLK--VPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGGK 222 +V++ + N+ G+ G EL CD++P+ P D+LLLVLWYK G+ SP+YTFD R + S A HYSD +F + RAV++ V P L+I L P DQG++KCR DFK+SPT++ +NL ++VPP P+++DENGR++ GP +G +++ATCV++GGK Sbjct: 47 DVQTTDAVNIEGLAGGTIELPCDLKPQIPGDELLLVLWYKIGFASPVYTFDVRNR-SPGSARHYSDRTLFDEPTRAVMRAVVEPSA----------------LVISNLIPGDQGVYKCRADFKRSPTKHNLLNLTVIVPPHPPLIYDENGRRLDDEFGPILIGGKVVATCVSNGGK 205
BLAST of nephrin- partial vs. nr
Match: gi|1209684648|gb|OWR41374.1| (hypothetical protein KGM_206243 [Danaus plexippus plexippus]) HSP 1 Score: 129.028 bits (323), Expect = 3.402e-33 Identity = 65/178 (36.52%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 49 QEEVESEFSQNVLGV---VGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMS-STLGPYKVGQELIATCVTSGGK 222 +EV E S N+ + G EL CD+ P P D++ LV+WYK+G+++PIY+ D R V +H+SD G RA + S T A L++ +LRPED G ++CR DF +SPT+N ++NL +++PP++ ++ ++ G ++ LGPY G E+ TCV GG+ Sbjct: 22 HQEVLIEESTNIESLHAPTGGTVELPCDVTPALPDDRMGLVIWYKQGHDTPIYSLDTRE----GVTSHWSDPTTLGSRATFR--------------SSTTPAVLLLTKLRPEDSGQYRCRVDFIRSPTKNTRLNLTVLIPPERLIILNQEGDEIKGGVLGPYDEGTEVNLTCVAVGGR 181
BLAST of nephrin- partial vs. nr
Match: gi|1227982909|ref|XP_021923081.1| (irregular chiasm C-roughest protein-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 128.642 bits (322), Expect = 8.065e-33 Identity = 71/185 (38.38%), Postives = 105/185 (56.76%), Query Frame = 0 Query: 41 WRREPF-VLQEEVESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSS--TLGPYKVGQELIATCVTSGGK 222 W + F VL EE+ + S V+ + L CD+Q P D++ LV+WYK+ + PIY+ DARG SL ATH++DE G RA +V D +GT L ++++R D G ++CR DF+ SPT+N +NL ++VPP+K + DENG + +GPY G + TCV +GG+ Sbjct: 13 WPADTFAVLHEEIVT--SVETTAVLAGIARLPCDLQTSGPTDKVTLVIWYKDSGSKPIYSLDARGH-SLDQATHWADEQALGGRAFFRVT-------DADQPAGT---HLAVEDVRDTDAGSYRCRVDFQGSPTRNSLVNLTVIVPPRKLAILDENGTNVHQKRVIGPYTEGSTVQITCVATGGR 184
BLAST of nephrin- partial vs. nr
Match: gi|1229726423|ref|XP_022125983.1| (uncharacterized protein LOC111000735 isoform X1 [Pieris rapae]) HSP 1 Score: 134.035 bits (336), Expect = 2.511e-32 Identity = 67/186 (36.02%), Postives = 104/186 (55.91%), Query Frame = 0 Query: 47 VLQEEVESE---------FSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKM-SSTLGPYKVGQELIATCVTSGGK 222 VLQ ES+ ++V +G +EL CD+ P HD + LV+WYK+G+N+P+YTFD R V TH+SD G RA + + T A L++ ++RPED G ++CR DF KSPT+N ++NL +++PP++ V+ D++G + +GP+ G + TCV GG+ Sbjct: 14 VLQRSAESQQDVIIEESSSIESVHAALGRAAELPCDVTPAIAHDSVALVIWYKQGHNTPVYTFDTRD----GVDTHWSDPATLGSRATFR--------------TSTTPALLVLTKIRPEDSGQYRCRVDFIKSPTKNTRLNLTVLIPPERLVILDQDGEEFRGGAMGPFDEGTRVNLTCVAIGGR 181
BLAST of nephrin- partial vs. nr
Match: gi|1229726425|ref|XP_022125984.1| (uncharacterized protein LOC111000735 isoform X2 [Pieris rapae]) HSP 1 Score: 134.035 bits (336), Expect = 2.735e-32 Identity = 67/186 (36.02%), Postives = 104/186 (55.91%), Query Frame = 0 Query: 47 VLQEEVESE---------FSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKM-SSTLGPYKVGQELIATCVTSGGK 222 VLQ ES+ ++V +G +EL CD+ P HD + LV+WYK+G+N+P+YTFD R V TH+SD G RA + + T A L++ ++RPED G ++CR DF KSPT+N ++NL +++PP++ V+ D++G + +GP+ G + TCV GG+ Sbjct: 14 VLQRSAESQQDVIIEESSSIESVHAALGRAAELPCDVTPAIAHDSVALVIWYKQGHNTPVYTFDTRD----GVDTHWSDPATLGSRATFR--------------TSTTPALLVLTKIRPEDSGQYRCRVDFIKSPTKNTRLNLTVLIPPERLVILDQDGEEFRGGAMGPFDEGTRVNLTCVAIGGR 181
BLAST of nephrin- partial vs. nr
Match: gi|1008446583|ref|XP_015837514.1| (PREDICTED: neural cell adhesion molecule 2 isoform X3 [Tribolium castaneum]) HSP 1 Score: 133.65 bits (335), Expect = 3.016e-32 Identity = 65/206 (31.55%), Postives = 116/206 (56.31%), Query Frame = 0 Query: 16 LLLAAAVTLTLGHKRGSVQSGSSARWRREPFVLQEEVESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGG 221 +L V LTL H + + ++EV +Q++ V G L CD+ P HD++ +V W+++G PIY+FD RGK L+ A+H+S +FG RA + + + A+L+I ++R D+G+++CR DF+ + T++++ NL ++VPP++P + D+ GR+++ T+GP++ G ++ TC T GG Sbjct: 10 ILFCVGVLLTLAHTKIDAK--------------EKEVSVVVTQDIEAVEGKSVSLPCDVTPPNNHDKVYMVFWFQQGSGYPIYSFDVRGK-PLSRASHWSAPDLFGSRAYFR--------------TVSEPAQLVIDDIRRHDEGVYRCRVDFRNAQTRSFRYNLTVIVPPEQPTILDKWGRQLNGTVGPHEEGDDITLTCRTVGG 186
BLAST of nephrin- partial vs. nr
Match: gi|768436002|ref|XP_011559463.1| (PREDICTED: nectin-2-like [Plutella xylostella]) HSP 1 Score: 126.331 bits (316), Expect = 3.303e-32 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 0 Query: 69 ELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMS-STLGPYKVGQELIATCVTSGGK 222 EL CD+ P D++ LV+WYK+G+ +PIYT D R V +H+SD G G RA + S T A L++ +LRPED G ++CR DF KSPT+N ++NL +++PP++ +V + G ++ LGPY G ++ TCV GG+ Sbjct: 43 ELPCDVTPTLADDRMGLVIWYKQGHTTPIYTLDTRE----GVTSHWSDPGTLGSRAAFR--------------SDTKPAVLILTKLRPEDSGQYRCRVDFIKSPTKNTRLNLTVLIPPERLIVLNHEGNEVQGGVLGPYDEGTDVNLTCVAVGGR 179
BLAST of nephrin- partial vs. nr
Match: gi|1008446581|ref|XP_015837513.1| (PREDICTED: neural cell adhesion molecule 2 isoform X2 [Tribolium castaneum]) HSP 1 Score: 132.494 bits (332), Expect = 8.327e-32 Identity = 64/206 (31.07%), Postives = 115/206 (55.83%), Query Frame = 0 Query: 16 LLLAAAVTLTLGHKRGSVQSGSSARWRREPFVLQEEVESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMSSTLGPYKVGQELIATCVTSGG 221 +L V LTL H + + V+ +++E+ V G L CD+ P HD++ +V W+++G PIY+FD RGK L+ A+H+S +FG RA + + + A+L+I ++R D+G+++CR DF+ + T++++ NL ++VPP++P + D+ GR+++ T+GP++ G ++ TC T GG Sbjct: 10 ILFCVGVLLTLAHTKIDAKEKEDLHSTSSAVVVTQDIEA--------VEGKSVSLPCDVTPPNNHDKVYMVFWFQQGSGYPIYSFDVRGK-PLSRASHWSAPDLFGSRAYFR--------------TVSEPAQLVIDDIRRHDEGVYRCRVDFRNAQTRSFRYNLTVIVPPEQPTILDKWGRQLNGTVGPHEEGDDITLTCRTVGG 192
BLAST of nephrin- partial vs. nr
Match: gi|1227982911|ref|XP_021923082.1| (irregular chiasm C-roughest protein-like isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 124.79 bits (312), Expect = 1.255e-31 Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 0 Query: 57 SQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKM--SSTLGPYKVGQELIATCVTSGGK 222 S V+ + L CD+Q P D++ LV+WYK+ + PIY+ DARG SL ATH++DE G RA +V D +GT L ++++R D G ++CR DF+ SPT+N +NL ++VPP+K + DENG + +GPY G + TCV +GG+ Sbjct: 3 SVETTAVLAGIARLPCDLQTSGPTDKVTLVIWYKDSGSKPIYSLDARGH-SLDQATHWADEQALGGRAFFRVT-------DADQPAGT---HLAVEDVRDTDAGSYRCRVDFQGSPTRNSLVNLTVIVPPRKLAILDENGTNVHQKRVIGPYTEGSTVQITCVATGGR 159
BLAST of nephrin- partial vs. nr
Match: gi|1200720028|ref|XP_012544741.2| (nephrin, partial [Bombyx mori]) HSP 1 Score: 126.331 bits (316), Expect = 1.977e-31 Identity = 64/178 (35.96%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 49 QEEV---ESEFSQNVLGVVGYPSELECDIQPKAPHDQLLLVLWYKEGYNSPIYTFDARGKTSLAVATHYSDEGVFGQRAVLKVPPGGGISGDVPDQSGTLKARLMIQELRPEDQGIFKCRTDFKKSPTQNYKMNLNIMVPPKKPVVHDENGRKMS-STLGPYKVGQELIATCVTSGGK 222 Q+E+ ES +++ G EL CD+ P P D + LV+WYK+G+ +PIY+FD R V +H+SD G RA + S + A L++ +LRPED G ++CR DF KSPT+N ++NL +++PP++ +V + G +++ +GPY G E+ TC+ GG+ Sbjct: 30 QQEILIEESAAIESLHAPTGGNVELPCDVTPTLPDDMMGLVIWYKQGHKTPIYSFDTRE----GVTSHWSDPTTLGVRATFR--------------SNSRPAVLILSKLRPEDSGQYRCRVDFIKSPTKNTRLNLTVLIPPERLIVLNHEGNEVNGGVVGPYDEGTEVNLTCIAVGGR 189 The following BLAST results are available for this feature:
BLAST of nephrin- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 12
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BLAST of nephrin- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of nephrin- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold273_size229271:105817..113769- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold273_size229271-snap-gene-1.23 ID=maker-scaffold273_size229271-snap-gene-1.23|Name=nephrin- partial|organism=Tigriopus kingsejongensis|type=gene|length=7953bp|location=Sequence derived from alignment at scaffold273_size229271:105817..113769- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nephrin- partial' has the following synonyms
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