general transcription factor iih subunit 3, maker-scaffold297_size217559-snap-gene-0.27 (gene) Tigriopus kingsejongensis

Overview


Name	general transcription factor iih subunit 3
Unique Name	maker-scaffold297_size217559-snap-gene-0.27
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of general transcription factor iih subunit 3 vs. L. salmonis genes
Match: EMLSAG00000000259 (supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337:1 gene:EMLSAG00000000259 transcript:EMLSAT00000000259 description:"snap_masked-LSalAtl2s103-processed-gene-10.11")

HSP 1 Score: 196.052 bits (497), Expect = 2.924e-62
Identity = 108/260 (41.54%), Postives = 146/260 (56.15%), Query Frame = 0

Query:   17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSV 276
            G   + + QLL++V+DMNPNQ  F   P +L   LD+ +  AN+HLMLHP+NA+A + S +    FLYP   D    + +RQ DGQ+E F  VE T+R +   +L++E   ++    +S LSG+L+MALSYI+RRR+E      L++R+L                                          QGADITGG+Y  V      ALLQFL WIFLP   +R  L LPS ++VD+RAACFCHR L+DIGFVCS+
Sbjct:    8 GSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|50403772|sp|Q13889.2|TF2H3_HUMAN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 258.07 bits (658), Expect = 7.532e-84
Identity = 136/296 (45.95%), Postives = 184/296 (62.16%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ-----------DESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+V+D NP  +++ KQ   ES F     +D+ + L NSHL ++ +N +A IASH Q   FLYP +  +            E +    +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  +E+   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHRNLI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIVVDANP--IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 294

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|122131719|sp|Q05B56.1|TF2H3_BOVIN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 256.914 bits (655), Expect = 2.354e-83
Identity = 135/297 (45.45%), Postives = 183/297 (61.62%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------------DESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + L NSHL ++ +N +A IASH Q   FLYP +  +             E      +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  +E+   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHRNLI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPSSEFTPSGSKDGKYELLTAANEVIAEEIKDLMTKSD--IEGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|81888006|sp|Q561R7.1|TF2H3_RAT (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 252.677 bits (644), Expect = 1.008e-81
Identity = 134/297 (45.12%), Postives = 185/297 (62.29%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------DESDNL------RQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + LAN+HL ++ +N +A IASH Q   FLYP +  +      D  + L        +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  + +   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHR+LI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLAVIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPSGSKDGKYELLTAANEVIAEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVP--QMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 250.366 bits (638), Expect = 7.674e-81
Identity = 134/297 (45.12%), Postives = 183/297 (61.62%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQ--PESLF---HWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQ------DESDNL------RQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGP 300
            E +  LLV+++D NP  +++ KQ   ES F     +D+ + LANSHL ++ +N +A IASH Q    LYP +         D  + L        +DG++E        I ++   ++          H E+LL+G+L+ AL YIHR  + +   + + SR+LV+ A+ D+A QYMN+MNV F+AQK  ++ID C+L+ D+GLLQQ  DITGG+Y KV     P+LLQ+L W+FLPD   R  L LP    VDYRAACFCHR+LI+IG+VCSVCLSIFC FSPICTTC T FK   P
Sbjct:    5 EDELNLLVIIVDTNP--IWWGKQALKESQFTLSKCMDAVMVLANSHLFMNRSNQLAVIASHIQESRLLYPGKNGGLGDFFGDPGNALPDCNPSGSKDGKYELLTVANEVIAEEIKDLMTKSD--IKGQHTETLLAGSLAKALCYIHRVNKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKV--PQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLP 295

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901129|sp|O74366.1|TFB4_SCHPO (RecName: Full=General transcription and DNA repair factor IIH subunit tfb4; Short=TFIIH subunit tfb4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 190.66 bits (483), Expect = 1.137e-57
Identity = 105/273 (38.46%), Postives = 156/273 (57.14%), Query Frame = 0

Query:   26 LLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQD---ESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF 295
            LLV++LD NP   +   +   +   L       N+HL  H +N +A +ASHS    +LYPS   +    E D  ++ +  +  F +V+  +      ++ +    T  V  ++++SGALS AL+YI++ + +     +L SR+L+ S +GD A QY+  MN  F AQK  + I+ C +E     L+Q AD TGG+Y KVD+     LLQ+L     PD  LR+ L+ P+   VD+RA CFCH+ ++DIGFVCSVCLSIFC+    C+TCHT F
Sbjct:   25 LLVVILDANPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEAN-TYRKFREVDDLVLSGMKRLMSS----TDKVSRKTMISGALSRALAYINQVQNK----NTLRSRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPK--GLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSVCLSIFCEPRVHCSTCHTKF 286

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|75155791|sp|Q8LF41.1|TFB4_ARATH (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=AtTFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 148.288 bits (373), Expect = 2.822e-41
Identity = 99/293 (33.79%), Postives = 148/293 (50.51%), Query Frame = 0

Query:   36 NQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFE----GFYQVEATIRKQAAHILRAETQPTAPVHAES-----LLSGALSMALSYIHR--RRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLE-KDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF-----KTPGPLPGMKRKAPAT 311
            N +F++    +   +L   ++  N+ L L+  N +  IA+   SC ++Y S        +L    G FE    G   +  ++ K+    +  + + +    +E      LLSG+LSMAL YI R  R   L        R+L +  S D   QY+  MN  FSAQ++ V ID+C +  +++  LQQ + ITGGV+     +    L Q+LT IF  D   R  + LP    VD+RA+CFCH+  ID+G++CSVCLSIFC+    C+TC +VF              KRKAP+T
Sbjct:   23 NPLFWSTTSITFSQFLSHVLAFLNAVLGLNQLNQVVVIATGYSSCDYIYDS--------SLTSNHGNFESNGTGMPAIFGSLLKKLEEFVTKDEELSKEEVSEDRIPSCLLSGSLSMALCYIQRVFRSGHLHPQP----RILCLQGSPDGPEQYVAVMNSIFSAQRLMVPIDSCYIGVQNSAFLQQASYITGGVHHT--PKQLDGLFQYLTTIFATDLHSRGFVQLPKPIGVDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSASDKKRKAPST 301

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901135|sp|Q12004.1|TFB4_YEAST (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 136.346 bits (342), Expect = 2.222e-36
Identity = 93/299 (31.10%), Postives = 148/299 (49.50%), Query Frame = 0

Query:   19 LAEPQGQLLVLVLDMNPNQVFFTKQPE-----SLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQT---DQDESDNLRQRD------GQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMS----ASGDTATQYMNYMNVFFSAQKMGVVIDTCML--EKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            + E    LL +++++ P +++ T   E     S+   L++ I   N+HL  +  N +A IA++SQ   +LYP  T      ES+N  + D        +  F  V+ T+ ++   +   E +        S L+GA+S  L+Y++R  +E SV  SL SR+LV++    +S D   QY+  MN  FSA KM   ID   +   K++  LQQ  D T GVY  V+S     L+Q+L      D  LR  +  P+   VD+R +C+    ++ +GF+CSVCL +     P   C  C + F
Sbjct:   18 VTEESPSLLTVIIEIAP-KLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKIINSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTE--GLIQYLATAMFIDPSLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQF 312

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901344|sp|Q75B93.1|TFB4_ASHGO (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 135.191 bits (339), Expect = 6.802e-36
Identity = 96/299 (32.11%), Postives = 145/299 (48.49%), Query Frame = 0

Query:   19 LAEPQGQLLVLVLDMNPN-QVFFTKQ---PESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQ-------FEGFYQVEATIRKQAAHILRAET---QPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVM----SASGDTATQYMNYMNVFFSAQKMGVVIDTCMLE--KDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            L E    LL LV+D NP     F ++      L   L S I   N+HL  + +N ++ IA+ S+   +LYP   D++ S   ++ + +       + GF  V+  + ++   + + E+   +   P    S LSGA+S  L+YI+R   E     SL SR+LV+    SAS D   QY+  MN  FSA KM   ID   +   K++  LQQ  D T G Y  V +     L+Q+L+     D  LR+ +  P+   VD+R +C+    ++ IGFVCSVCL +     P   C  C + F
Sbjct:   18 LVEETPSLLTLVIDTNPKLWAEFDREVGKKGQLMQVLKSTIVFLNAHLSFNNSNQVSVIAACSRGIKYLYPQADDKEGSTKKKKSEDRSIINRNMYRGFRNVDEAVVEELYRVFQQESKQLEDGVPQPFRSTLSGAMSAGLTYINRITHETE-GVSLKSRLLVITCGSSASKDEVFQYIPIMNCIFSATKMKCPIDVVKVGGVKESTFLQQATDATNGNYLHVANTD--GLIQYLSTAMFIDPSLRQWVVKPNQSSVDFRTSCYLTGKVVAIGFVCSVCLCVLSIIPPGNKCPACDSEF 313

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|74861043|sp|Q86IB5.1|TF2H3_DICDI (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=TFIIH basal transcription factor complex subunit 3)

HSP 1 Score: 134.035 bits (336), Expect = 2.995e-35
Identity = 90/262 (34.35%), Postives = 146/262 (55.73%), Query Frame = 0

Query:   50 WLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYP-SQTD--------------QDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCML-EKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVF 295
            +L+  +   N++LML+  N +A I S     SF++P S  D               +  + L   +   +G  Q+ A ++K    I   +T   +   +      ++S+AL YI+R ++E     ++  R+LV + S D ++QY++ MN  FS+QK  + +D+C+L + D+  LQQ + +T G+Y K   +    L Q+L   FL DT  R++L+ P++  VDYRA+CFCH+ ++DIG+VCSVCLSIFC  S  C+TC T F
Sbjct:   95 FLEHFMVFINAYLMLNQENQLAIICSKIGESSFVFPQSNIDQYQQEQQELEQRQLNENGELLPTPNKTIQG--QILAKLQKLDLEIKHDQTDILSSSFSA-----SMSIALCYINRIKRE---TPTIKPRILVFNISPDVSSQYISVMNCIFSSQKQSIPVDSCILSQSDSTFLQQASHLTSGIYLKPQKQEL--LSQYLLTTFLLDTLSRKSLAYPTLKSVDYRASCFCHKRIVDIGYVCSVCLSIFCGHSSSCSTCGTKF 344

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BLAST of general transcription factor iih subunit 3 vs. SwissProt
Match: gi|62901298|sp|Q6CVX9.1|TFB4_KLULA (RecName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B subunit 4)

HSP 1 Score: 130.954 bits (328), Expect = 2.371e-34
Identity = 87/260 (33.46%), Postives = 132/260 (50.77%), Query Frame = 0

Query:   45 ESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQ-PTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVM----SASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEK--DAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSP--ICTTCHTVF 295
            + L   L S +   N+HL  +  N +  IA+HS+   +LYPS  D   S ++   D  + GF  V+  + +Q   + + E +   + V  +S LSGA+S AL+Y++R  +E +   SL SR+LV+    S   D   QY+  MN  FSA KM   ID   +    ++  LQQ  D T GVY  V++     L+Q+L+     D  LR  +  P+   VD+R +CF    ++ +GFVCSVCL +     P   C  C + F
Sbjct:   56 KQLIEALKSIVVFLNAHLAFNSGNQVCLIAAHSEGMKYLYPS-ADSKPSMSMVSSD-MYRGFRNVDEIVVEQWYRLFKEELEGQESKVSMKSSLSGAMSSALTYVNRILKE-NENTSLRSRLLVITCGTSQGKDEIFQYIPIMNCIFSATKMKCSIDVVKIGGGIESTFLQQATDATSGVYLHVENTR--GLIQYLSTAMFIDPSLRNVIIKPNQGSVDFRTSCFLTGKVVAVGFVCSVCLCVLSVIPPGQKCPACDSPF 310

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BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|225717796|gb|ACO14744.1| (General transcription factor IIH subunit 3 [Caligus clemensi])

HSP 1 Score: 335.88 bits (860), Expect = 4.905e-112
Identity = 162/288 (56.25%), Postives = 210/288 (72.92%), Query Frame = 0

Query:   23 QGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRKAPA 310
            + QLL+LV+DMNPNQ    ++P  L   LDS +  +N+HL+LHP+NA+AAI S S    FLYPS    D S  LRQ DGQ+E F  VE ++R + + +L AET  +     +S LSG+L+MAL+YI+R+R+E   +  L +R+L+++ASGDTA+QYMNYMNVFF+AQK+ V++D CML+ D+ LLQQGADITGG+Y  V      ALLQFL WIFLP   +R  L LP+  +VD+RAACFCHR L+ +GFVCSVCLSIFCKFSPICTTC TVF+ P PL G K+K+ A
Sbjct:   14 EAQLLILVMDMNPNQRLLLEEPTRLTSVLDSLLCFSNAHLLLHPSNALAAIGSLSSGSYFLYPSSCIDDTSPELRQLDGQYELFTLVETSVRNKFSQLLEAETSGSE----DSPLSGSLAMALAYINRKRKE---SPELRARILILTASGDTASQYMNYMNVFFTAQKLNVLLDACMLQSDSPLLQQGADITGGLYFNVP--DLAALLQFLLWIFLPSAEIRPQLGLPTGVKVDFRAACFCHRQLVGVGFVCSVCLSIFCKFSPICTTCQTVFRVPAPLLGKKKKSIA 292

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BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|225712364|gb|ACO12028.1| (General transcription factor IIH subunit 3 [Lepeophtheirus salmonis] >gi|290562788|gb|ADD38789.1| General transcription factor IIH subunit 3 [Lepeophtheirus salmonis])

HSP 1 Score: 335.109 bits (858), Expect = 8.973e-112
Identity = 162/291 (55.67%), Postives = 211/291 (72.51%), Query Frame = 0

Query:   17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRK 307
            G   + + QLL++V+DMNPNQ  F   P +L   LD+ +  AN+HLMLHP+NA+A + S +    FLYP   D    + +RQ DGQ+E F  VE T+R +   +L++E   ++    +S LSG+L+MALSYI+RRR+E      L++R+LV++ASGDTA+QYMNYMNVFF+AQK+ V++DTCML+ D+ LLQQGADITGG+Y  V      ALLQFL WIFLP   +R  L LPS ++VD+RAACFCHR L+DIGFVCSVCLSIFCKFSPICTTC T+F+ P PL G K+K
Sbjct:    8 GSGGDSKAQLLIIVMDMNPNQKLFLHDPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARILVITASGDTASQYMNYMNVFFTAQKLDVLLDTCMLQIDSPLLQQGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSVCLSIFCKFSPICTTCQTIFRVPPPLMGGKKK 291

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|1325321303|ref|XP_023342456.1| (general transcription factor IIH subunit 3-like [Eurytemora affinis])

HSP 1 Score: 327.791 bits (839), Expect = 5.190e-109
Identity = 153/289 (52.94%), Postives = 203/289 (70.24%), Query Frame = 0

Query:   20 AEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLPGMKRKA 308
             +   Q+LV+V+D+NPNQ+ F +   S    ++S I+  NSHLMLH  N IA +ASHS  CS+LYP  ++  E   LRQRDGQ+E  YQVE  +R++   +L  +    +   AESLLSG L+MAL+YI+R +  LS AE +  R+LV+S++GD+A QY+NYMNVFF+AQK+   +D CML  D+GLLQQG+DITGGVY KV+  +   LLQ+L W+FLP   LR  L  P   +VDYRAACFCHR L+D+G+VCSVCLSIFC+F+P+CTTCH+VF  P  +P  KR  
Sbjct:    4 VDESNQMLVVVVDVNPNQLLFARNTGSFSRIMNSVITFLNSHLMLHSTNRIALLASHSSGCSYLYPDPSEDTEL--LRQRDGQYEVLYQVETVVRRRLKAVLSRDMNLGSTAGAESLLSGGLAMALTYINRVKMNLSPAEKINPRLLVISSTGDSAAQYINYMNVFFTAQKLSYPLDVCMLGTDSGLLQQGSDITGGVYLKVE--NIERLLQYLVWMFLPSPPLRSMLGAPPPVKVDYRAACFCHRQLVDVGYVCSVCLSIFCRFNPVCTTCHSVFAPPKIIPKKKRDG 288

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|817067549|ref|XP_012255671.1| (general transcription factor IIH subunit 3 isoform X1 [Athalia rosae])

HSP 1 Score: 323.553 bits (828), Expect = 2.033e-107
Identity = 157/282 (55.67%), Postives = 195/282 (69.15%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LLV+VLD NP Q F  +    L   LDS I  AN+HLM   NN +A +A HS S +FLYP     D+   +RQ DGQ+EGF  VE  +R+    ++  E     P++ ESL+ GAL+MAL YI R  +E +  E + SR+LV++ S D+A+QYMNYMNVFF+AQK+GVVID C L+++ GLLQQG DITGG Y K+       LLQ+L W+FLPD  +R  L LP   +VDYRAACFCHR L+DIGFVCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EVEKSLLVIVLDTNPVQKFVRQDTRILTQCLDSVIVFANAHLMQKSNNQLAVMACHSHSSTFLYPD----DKPTEIRQTDGQYEGFTLVERMVRQNLQKLVN-EISTNKPLNTESLIGGALAMALCYIVRLEREKAAGEKIHSRILVITGSNDSASQYMNYMNVFFTAQKLGVVIDVCSLDQELGLLQQGCDITGGNYLKIP--QLAGLLQYLLWVFLPDPNIRSKLVLPPPVKVDYRAACFCHRELVDIGFVCSVCLSIFCKFSPICTTCHTVFKMPGPIP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|998497658|ref|XP_015524613.1| (PREDICTED: general transcription factor IIH subunit 3 [Neodiprion lecontei])

HSP 1 Score: 321.242 bits (822), Expect = 1.946e-106
Identity = 154/280 (55.00%), Postives = 196/280 (70.00%), Query Frame = 0

Query:   23 QGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            +  LLV+VLD NP Q F  +    L   LDS I  AN+HLM   NN +A +A HS S +FLYP +   +    +RQ DGQ+EGF  VE T+R+    ++  E     P++ ESL+ GAL+MAL YI R  +E +  E + SR+LV++ S D+A+QYMNYMNVFF+AQK+GVV+D C L+++ GLLQQG DITGG Y K+       LLQ+L W+FLPD ++R  L LP   +VDYRAACFCHR L+DIG+VCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    6 EKSLLVIVLDTNPVQKFVRQDTRILTQCLDSVIVFANAHLMQKSNNQLAVMACHSHSSTFLYPDEKPME----VRQIDGQYEGFMMVERTVRQNLQKLIH-EIVTNKPLNTESLIGGALAMALCYIVRLEREKAAGEKIHSRILVVTGSNDSASQYMNYMNVFFTAQKLGVVVDVCSLDQELGLLQQGCDITGGNYLKIP--QLAGLLQYLLWVFLPDPKVRSKLVLPPPVKVDYRAACFCHRELVDIGYVCSVCLSIFCKFSPICTTCHTVFKMPGPMP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|1061119649|ref|XP_017885594.1| (PREDICTED: general transcription factor IIH subunit 3 [Ceratina calcarata])

HSP 1 Score: 318.931 bits (816), Expect = 1.343e-105
Identity = 154/282 (54.61%), Postives = 195/282 (69.15%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E    LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A +A +S    FLYP     ++S  +RQ DGQ+E F  VE TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E    E L SR+LV++AS D+A QYMNYMN+FF+AQKMG+++D C L++D  LLQQG DITGG+Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIDTSLLIIVLDVNPVQRIVKQETRILTQCLDSTIVFANAHLMQSSNNQLAVLACYSHGAKFLYPC----EKSSEIRQIDGQYEKFTMVERTIRQQLQQVIN-EISLDKPLNGESLMSGALTMALCYVARLEREKVAGEKLHSRMLVITASNDSAIQYMNYMNIFFTAQKMGIILDVCSLDQDLTLLQQGCDITGGIYLKVP--QLSGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPIP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|340717520|ref|XP_003397229.1| (general transcription factor IIH subunit 3 [Bombus terrestris])

HSP 1 Score: 318.931 bits (816), Expect = 1.708e-105
Identity = 152/282 (53.90%), Postives = 196/282 (69.50%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS +  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  +E TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E   +E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIIKQETRILTQCLDSTVVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPLE----IRQIDGQYEKFTMIERTIRQQLQQVIN-EISMDKPLNGESLISGALTMALCYVARLEREKVASEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLNGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKIPGPIP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|925671794|gb|KOX69540.1| (General transcription factor IIH subunit 3 [Melipona quadrifasciata])

HSP 1 Score: 318.546 bits (815), Expect = 2.101e-105
Identity = 153/282 (54.26%), Postives = 195/282 (69.15%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  VE T+R+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E    E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPVE----IRQIDGQYEKFTMVERTVRQQLQQVIN-EISLDKPLNGESLISGALTMALCYVARLEREKIAGEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLSGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPIP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|350407575|ref|XP_003488130.1| (general transcription factor IIH subunit 3 [Bombus impatiens])

HSP 1 Score: 318.546 bits (815), Expect = 2.557e-105
Identity = 152/282 (53.90%), Postives = 196/282 (69.50%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS +  AN+HLM   NN +A IA HS    FLYP +   +    +RQ DGQ+E F  +E TIR+Q   ++  E     P++ ESL+SGAL+MAL Y+ R  +E   +E + SR+LV++AS D+ATQYMNYMN+FF+AQKMG+++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCS+CLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIVVLDVNPVQRIIKQETRILTQCLDSTVVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEKPLE----IRQIDGQYEKFTMIERTIRQQLQQVIN-EISMDKPLNGESLISGALTMALCYVARLEREKVASEKIYSRILVITASNDSATQYMNYMNIFFTAQKMGIILDVCSLDQELTLLQQGCDITGGNYLKVP--QLNGLLQYLLWIFLPDPNVRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSICLSIFCKFSPICTTCHTVFKIPGPIP 278

[Close]

BLAST of general transcription factor iih subunit 3 vs. nr
Match: gi|383855904|ref|XP_003703450.1| (PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Megachile rotundata])

HSP 1 Score: 317.39 bits (812), Expect = 6.257e-105
Identity = 155/282 (54.96%), Postives = 194/282 (68.79%), Query Frame = 0

Query:   21 EPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSVCLSIFCKFSPICTTCHTVFKTPGPLP 302
            E +  LL++VLD+NP Q    ++   L   LDS I  AN+HLM   NN +A IA HS    FLYP     ++   +RQ DGQ+E F  VE T+R+Q   ++  E     P++ ESL+SGAL+MAL YI R  +E    + L SR+L ++AS D+ATQYMNYMN+FF+AQKMGV++D C L+++  LLQQG DITGG Y KV       LLQ+L WIFLPD  +R  L LP   +VDYRAACFCH+ LIDIG+VCSVCLSIFCKFSPICTTCHTVFK PGP+P
Sbjct:    4 EIETSLLIIVLDVNPVQRIVKQETRILTQCLDSTIVFANAHLMQSSNNQLAMIACHSHGAKFLYPC----EKPVEIRQIDGQYEKFTMVERTVRQQLQQVIN-EISMDKPLNGESLISGALTMALCYIARLEREKVAGQKLYSRILTITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVP--QLSGLLQYLLWIFLPDPSIRSKLVLPPPVKVDYRAACFCHQELIDIGYVCSVCLSIFCKFSPICTTCHTVFKMPGPIP 278

The following BLAST results are available for this feature:

BLAST of general transcription factor iih subunit 3 vs. L. salmonis genes
BLAST of general transcription factor iih subunit 3 vs. SwissProt
BLAST of general transcription factor iih subunit 3 vs. nr

BLAST of general transcription factor iih subunit 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000000259	2.924e-62	41.54	supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337...	[more]

BLAST of general transcription factor iih subunit 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 13


Match Name	E-value	Identity	Description
gi\|50403772\|sp\|Q13889.2\|TF2H3_HUMAN	7.532e-84	45.95	RecName: Full=General transcription factor IIH sub...	[more]
gi\|122131719\|sp\|Q05B56.1\|TF2H3_BOVIN	2.354e-83	45.45	RecName: Full=General transcription factor IIH sub...	[more]
gi\|81888006\|sp\|Q561R7.1\|TF2H3_RAT	1.008e-81	45.12	RecName: Full=General transcription factor IIH sub...	[more]
gi\|22654149\|sp\|Q8VD76.1\|TF2H3_MOUSE	7.674e-81	45.12	RecName: Full=General transcription factor IIH sub...	[more]
gi\|62901129\|sp\|O74366.1\|TFB4_SCHPO	1.137e-57	38.46	RecName: Full=General transcription and DNA repair...	[more]
gi\|75155791\|sp\|Q8LF41.1\|TFB4_ARATH	2.822e-41	33.79	RecName: Full=General transcription and DNA repair...	[more]
gi\|62901135\|sp\|Q12004.1\|TFB4_YEAST	2.222e-36	31.10	RecName: Full=General transcription and DNA repair...	[more]
gi\|62901344\|sp\|Q75B93.1\|TFB4_ASHGO	6.802e-36	32.11	RecName: Full=General transcription and DNA repair...	[more]
gi\|74861043\|sp\|Q86IB5.1\|TF2H3_DICDI	2.995e-35	34.35	RecName: Full=General transcription factor IIH sub...	[more]
gi\|62901298\|sp\|Q6CVX9.1\|TFB4_KLULA	2.371e-34	33.46	RecName: Full=General transcription and DNA repair...	[more]

Pages

BLAST of general transcription factor iih subunit 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225717796\|gb\|ACO14744.1\|	4.905e-112	56.25	General transcription factor IIH subunit 3 [Caligu...	[more]
gi\|225712364\|gb\|ACO12028.1\|	8.973e-112	55.67	General transcription factor IIH subunit 3 [Lepeop...	[more]
gi\|1325321303\|ref\|XP_023342456.1\|	5.190e-109	52.94	general transcription factor IIH subunit 3-like [E...	[more]
gi\|817067549\|ref\|XP_012255671.1\|	2.033e-107	55.67	general transcription factor IIH subunit 3 isoform...	[more]
gi\|998497658\|ref\|XP_015524613.1\|	1.946e-106	55.00	PREDICTED: general transcription factor IIH subuni...	[more]
gi\|1061119649\|ref\|XP_017885594.1\|	1.343e-105	54.61	PREDICTED: general transcription factor IIH subuni...	[more]
gi\|340717520\|ref\|XP_003397229.1\|	1.708e-105	53.90	general transcription factor IIH subunit 3 [Bombus...	[more]
gi\|925671794\|gb\|KOX69540.1\|	2.101e-105	54.26	General transcription factor IIH subunit 3 [Melipo...	[more]
gi\|350407575\|ref\|XP_003488130.1\|	2.557e-105	53.90	general transcription factor IIH subunit 3 [Bombus...	[more]
gi\|383855904\|ref\|XP_003703450.1\|	6.257e-105	54.96	PREDICTED: general transcription factor IIH subuni...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold297_size217559	supercontig	scaffold297_size217559:64676..67902 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:regulation of transcription
Note	DNA-dependent

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold297_size217559-snap-gene-0.27-mRNA-1	maker-scaffold297_size217559-snap-gene-0.27-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold297_size217559:64676..67902+

gene from alignment at scaffold297_size217559:64676..67902+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold297_size217559-snap-gene-0.27 ID=maker-scaffold297_size217559-snap-gene-0.27|Name=general transcription factor iih subunit 3|organism=Tigriopus kingsejongensis|type=gene|length=3227bp|location=Sequence derived from alignment at scaffold297_size217559:64676..67902+ (Tigriopus kingsejongensis)
CTCATCCGGTCAATTCAGGTCACCCTGACTAGATTTTTCCGAGCTGTTTG
TGTCTGTTGTGAAAATAAGAGTCAATAAGTTCCGCATGTCTGCCCGGAGA
TCGGTGATTGAATGATTCGTTGCGCCCGTGTCTGGCCGTGGGATCACATT
CGACCCTTTCACACCCAAAGTCCAGTGAGTCTATGTATGGCCAAGAAGTC
CAAAGCCGCCTCGCGCCCGCCCCCGGCTGCCACGCCCACCCCAACCCCTT
CGAGTGGACCCGTTCATTGGACCGCCCGTGGATTTGCCCGCATCTGCCTC
GTGGTTCAACCCAATTGCGCCCAATCCTCGGTGCAAGAGGTAATGCCAAT
TTCTCATTGTGCTACAAATTGAGGCAGCTCCTTCAGCGCTCCAACATGAT
CCTACATCTTCGATTGATCCTACATCTTTGATTCAGTGCCACCAGGATAG
CCACCATGTTGGAGTTCAGGGTGTGTGTGTGTGTGTGTGTAATCGCACCT
TCCGGAGGTTTCGTGTTCTACACCATGGAACCCCCATGGTGAACACAGGG
CCCACTGATGTTATTAGCTAATTTAGCTAGTCGCCGAGCAGCCCCGTACA
ATCCAGCTCCAACCACTACTTTAATTGGTGGGGAACCACAAGGGACCTGT
CCTCAAGATGTGGCCGCACCCGTTTTTCCTGATCTTTGAACGACTAAGGT
GACAGGGAGTCGTCATTCACTCCCCTCAGTCGAAGAAAGTCTGGCGTGGC
GAAAATTTCTTTATCCGCCGGGCCCGGGAATCGATCTGCGGCCTTTCAGC
ACGGCAGACTTCTTCGCTGACCACTTCACCATTCAATCCACATGTGTGTT
ACTCGGGTTCGAATCTCAGGGCGTCCCAGTTCACAGTGTGTGTTGCTCCC
AGGCTCAAAGTATTCCATGAATGCATTGTGAAGTCATCAGTCCGGCCTGA
GGTGGCGTGTGATTGATGCACCCAACTCAGTGCCACGGAGGCTGTGACCT
GGCCAGCGCTGGGGGTGAGTTTGAACATTGAACATCCTGTTTGCTTTGTT
TGTTTGGAAGGCCCTGGGCATTCCTGCCCACCTACTAGGGAAATCTCCGG
GGAGTCATAGTCAGCCTTATAGAATCATGGTCAAATTTATCATGAATTAT
TACCTTACCCTCGAGGAATGGCCACGGGTACGCCCACTTTAATCCCGCCA
GGACAGCACACATTAGCTGTGAGTAAACACCACTAGTGGCCGGATATGGG
CCAGCCCGGGGATCGAATCCACGACCCTCGGATAACGCAATGATAGATGA
CTGATTGTGTCACTCTACCATTGCGCTACGCTGCTTGCCTACATTGAACA
TCCATTGCACTTCACCTCGGGCAGGTGAATTTAATAATAATAATAATAAA
TATGTGACTTTAATGCGTTAACTTATACCTCGACTCATTCGTAGGGAGGA
GTGAAACCAAAAAGCGGTCAAGATTGTCATGAAAATCGCGAGAAACGGGC
GAAAAAATGTGGTCTCTCCGGTCAATGAAACGAAAGGGAAATTCTTATAT
AACACCCTGTACTACTCAAGCCTGAATTGAGTGTCCCAGAAAACCCCAAT
TTTCGGTGTATCACTCAATTCGAAAAAGTAACGCTCAGTAAGTAAAAAAA
AATTTGGCAACATTACAAGGCCATTGTTTGGTCAAAAATAACATCATAAT
CCGAACCCTGGTCCACCAAGTGCTTGTCTGTGGGATGTTATCTGCTTCGT
CTTAAGCTTGTGTTTGTCTGAGGTTATTCATGGAGTGCTAGAATCACTTT
TCTTTCTGTGCGACCTCCAGGTGATTCTAGTACTCCTTGGGTTATTTAAG
ATCAGAGCCTTGGGACTGACCTAGAGGACCTAAAGATCAGAGCCTTGGGA
CTGACCTAGAGGACCTAAAGATCAGAGCCTTGGGACTGACCTAGAGGACC
TAAAGATCAGAGCCTTGGGACTGACCTAGAGGACCTAAAGATCAGAGCCT
TGGGACTGACCTAGAGGACCTTCATTGTCAAGTTCTACACCATTTTCTTT
CAGGTGAACGAGAGTGAGGTCAAACTGAGACTGAACGCACCTCCACGTGA
CGGCGAGGCCAACCTTGAGGTCGTGGCCCTTCTGGCTCGAGCCTTGGGCG
CACGCAAGGGCGATCTGGCCATCGTCCAAGGCCACAAGTCGAGGACCAAA
GTGATCGAATTGACGGGAAATCACGGCCAGACCGCCGATCAGATTTTGTC
CCAGCTCCGATCGCAAGTGGACCGGTAGCCAAAATGTCGGATCTGGTAGT
GACCACGGCCACCAGCGACCTTAAGGAGCCCGGGGTCCTGGCTGAGCCGC
AGGGCCAGTTACTGGTGCTCGTTCTGGACATGAATCCCAATCAAGTCTTC
TTCACCAAACAGCCCGAGTCGCTCTTTCATTGGCTGGACTCGGCCATCAG
TCTGGCCAATTCCCATCTCATGCTCCATCCCAATAACGCTATCGCGGCCA
TTGCCTCTCACAGTCAGTCTTGTAGTTTCCTCTATCCGTCCCAGACTGAC
CAGGATGAGAGCGACAACCTCCGTCAACGGGACGGCCAATTCGAAGGCTT
CTACCAAGTCGAGGCCACCATTCGGAAGCAAGCCGCCCACATCCTCCGGG
CCGAGACCCAACCCACCGCCCCCGTCCACGCGGAATCCTTGCTCTCGGGT
GCCTTGAGCATGGCCTTGTCGTACATCCATCGGCGCCGGCAGGAACTGTC
GGTGGCCGAGAGTCTCACGTCGCGCGTGCTGGTCATGTCGGCCTCGGGTG
ATACGGCCACCCAGTACATGAACTACATGAACGTGTTCTTTAGTGCTCAG
AAAATGGGTGTGGTCATCGACACGTGCATGCTGGAGAAAGACGCCGGTCT
CCTCCAACAGGGAGCCGATATCACCGGTGGTGTCTACCGGAAAGTGGACT
CGAGACACTTTCCAGCCCTGCTCCAGTTCCTCACCTGGATATTTCTGCCG
GATACTCGACTGCGCGAAGCACTCTCATTGCCTTCCATGGATCGGGTGGA
CTATCGAGCCGCCTGCTTCTGCCACCGAAACCTCATTGATATCGGTTTCG
TGTGCTCGGTTTGTTTGTCGATATTTTGCAAGTTCAGCCCGATCTGCACC
ACTTGTCATACTGTATTCAAAACGCCGGGGCCTCTGCCTGGTATGAAGCG
AAAAGCCCCCGCCACCTAACACGGGAA

Synonyms

The feature 'general transcription factor iih subunit 3' has the following synonyms


Synonym
Tk11578

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