multispecies: serine acetyltransferase, maker-scaffold301_size216225-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of multispecies: serine acetyltransferase vs. L. salmonis genes
Match: EMLSAG00000004570 (supercontig:LSalAtl2s:LSalAtl2s238:699874:700592:-1 gene:EMLSAG00000004570 transcript:EMLSAT00000004570 description:"maker-LSalAtl2s238-augustus-gene-7.20") HSP 1 Score: 88.5817 bits (218), Expect = 1.001e-21 Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 0 Query: 50 TVRNVQRTTAAQLAEQALIRDFSTCLQLTFCIVGTNPQAQGYATHHQLSQDNHVLTMAAGVVASVETFKQVLTTV------EHSQPMTRMQQLVSSYELGRATRDAHICQSTFPCDHPASDLKIRPIGKALGGNNLKLSHLIDCKALSSVCPGVSIGCSLCAMFAPATCSSTCTVGALFCGSTAIGC 230 TV R + ++AE L + + C T C VGT ++T+AAG+V + +V+ + E++ P + + V+SYE+G +T++ +C+ FPC A+ L + + N + + C A+ S+CPGVSIGC+LC +FAP TC C VG ++CG ++ C Sbjct: 30 TVLQEIRLNSVRMAEANLHNE-NLCFFRTMCAVGTQRTVP-------------IMTLAAGIVGFRKILDKVMDDIXDSGINEYNFP--SIYRAVASYEVGISTKNLDLCEKLFPCIQTATHLLNEAV--TVKHRNSRAT----CNAVGSLCPGVSIGCALCGVFAPGTCGQQCIVGGIYCGVSSYSC 194
BLAST of multispecies: serine acetyltransferase vs. L. salmonis genes
Match: EMLSAG00000006295 (supercontig:LSalAtl2s:LSalAtl2s342:191019:196022:-1 gene:EMLSAG00000006295 transcript:EMLSAT00000006295 description:"maker-LSalAtl2s342-augustus-gene-2.18") HSP 1 Score: 85.5001 bits (210), Expect = 3.172e-19 Identity = 58/207 (28.02%), Postives = 99/207 (47.83%), Query Frame = 0 Query: 39 PQNPGYNSLAWTVRNVQRTTAAQLAEQAL-IRDFSTCLQLTFCIVGTNPQAQGYATHHQLSQDNHVLTMAAGVVASVETFKQVLTTVE-HSQPMTRMQQLVSSYELGRATRDAHICQSTFPCDHPASDLKIRPIGKALGGNNLKLSHLIDCKALSSVCPGVSIGCSLCAMFAPATCSSTCTVGALFCGSTAIGCME--AKRRKEAKT 241 P++P Y+S TV R +A +AE+ L + + C + +FC V LS N A +SV Q+L V + + LV++Y +G T++ IC+ F C+ P ++ R ++C+A S++CPG++I C LCA+ +P TC C + A++CG++ C + +K+ K AK+ Sbjct: 62 PKDP-YSSYGRTVLTQVRMQSAIMAEKYLRTSEDTQCTKKSFCDVAA------------LSNVNE---NAKATYSSVNVLTQMLDEVSGQDKEFPHISSLVAAYTVGTKTKNGTICKWLFACNKPQEIIEGR----------------VNCRATSALCPGIAISCGLCAIISPETCGVVCPIAAIYCGTSGYSCAKKGSKKPKPAKS 236
BLAST of multispecies: serine acetyltransferase vs. nr
Match: gi|1325267816|ref|XP_023343089.1| (uncharacterized protein LOC111712640 [Eurytemora affinis]) HSP 1 Score: 94.7449 bits (234), Expect = 2.347e-20 Identity = 60/186 (32.26%), Postives = 95/186 (51.08%), Query Frame = 0 Query: 48 AWTVRNVQRTTAAQLAEQALIRDFSTCLQLTFCIVGTNPQAQGYATHHQLSQDNHVLTMAAGVVASVETFKQVLTTVEHSQPMTRMQQLVSSYELGRATRDAHICQSTFPCDHPAS-DL-KIRPIGKALGGNNLKLSHLIDCKALSSVCPGVSIGCSLCAMFAPATCSSTCTVGALFCGSTAIGCM 231 A T+ +Q TA +AE +L + CL ++C+VG + T Q+ A G+ S F +V+ TV+ S+ + M +L SS+ELG ++ D+ IC F C+ + DL + +P L +C + +VCPG +IGC+LC MF P TC + C + +FCG++ CM Sbjct: 17 AETLEYMQSQTAL-VAELSLEGRVTDCLLRSYCLVGAHGD-----TGSQV---------AKGIADSYAVFSEVMNTVKGSEKLVNMNKLKSSFELGASSTDSEICGQVFRCELEENFDLPEQQP-------------RLPECSNIGAVCPGAAIGCTLCGMFLPGTCGTLCPMAGIFCGASGYFCM 174 The following BLAST results are available for this feature:
BLAST of multispecies: serine acetyltransferase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of multispecies: serine acetyltransferase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of multispecies: serine acetyltransferase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold301_size216225:66381..67528+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold301_size216225-snap-gene-0.15 ID=maker-scaffold301_size216225-snap-gene-0.15|Name=multispecies: serine acetyltransferase|organism=Tigriopus kingsejongensis|type=gene|length=1148bp|location=Sequence derived from alignment at scaffold301_size216225:66381..67528+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'multispecies: serine acetyltransferase' has the following synonyms
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