---NA---, maker-scaffold301_size216225-snap-gene-0.21 (gene) Tigriopus kingsejongensis

Overview
Name---NA---
Unique Namemaker-scaffold301_size216225-snap-gene-0.21
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000004570 (supercontig:LSalAtl2s:LSalAtl2s238:699874:700592:-1 gene:EMLSAG00000004570 transcript:EMLSAT00000004570 description:"maker-LSalAtl2s238-augustus-gene-7.20")

HSP 1 Score: 155.221 bits (391), Expect = 3.575e-47
Identity = 77/180 (42.78%), Postives = 118/180 (65.56%), Query Frame = 0
Query:   61 DPESDMIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEEAK 240
            + E+ ++ ++R  ++R+AEANL  E  N CF  +MC VGT+  V  P  ++  GI  +   L ++++ I  D  +   +FP+I+R ++S+ +G +TK++ +C  LFPC  ++T   +   +    R+ RATC A G+LCPGVSIGCALCG+F+PGTCG QCIV G+YCGVS Y+C  + K
Sbjct:   26 NNEATVLQEIRLNSVRMAEANLHNE--NLCFFRTMCAVGTQRTV--PIMTLAAGIVGFRKILDKVMDDIX-DSGINEYNFPSIYRAVASYEVGISTKNLDLCEKLFPCIQTAT-HLLNEAVTVKHRNSRATCNAVGSLCPGVSIGCALCGVFAPGTCGQQCIVGGIYCGVSSYSCSYKDK 199          
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000006295 (supercontig:LSalAtl2s:LSalAtl2s342:191019:196022:-1 gene:EMLSAG00000006295 transcript:EMLSAT00000006295 description:"maker-LSalAtl2s342-augustus-gene-2.18")

HSP 1 Score: 107.457 bits (267), Expect = 1.946e-26
Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 0
Query:   60 QDPESD----MIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEE-AKTPK 243
            +DP S     ++ Q+R Q+  +AE  LR   +  C   S C V   +NV     +    + +    L E+        + +   FP+I  +++++ +G  TK+  +C  LF C              Q + +GR  C+A  ALCPG++I C LC I SP TCG  C +A +YCG SGY+C ++ +K PK
Sbjct:   63 KDPYSSYGRTVLTQVRMQSAIMAEKYLRTSEDTQCTKKSFCDVAALSNVNENAKATYSSVNVLTQMLDEV--------SGQDKEFPHISSLVAAYTVGTKTKNGTICKWLFACNKP-----------QEIIEGRVNCRATSALCPGIAISCGLCAIISPETCGVVCPIAAIYCGTSGYSCAKKGSKKPK 232          
BLAST of ---NA--- vs. nr
Match: gi|1325267816|ref|XP_023343089.1| (uncharacterized protein LOC111712640 [Eurytemora affinis])

HSP 1 Score: 102.064 bits (253), Expect = 5.852e-23
Identity = 59/177 (33.33%), Postives = 92/177 (51.98%), Query Frame = 0
Query:   64 SDMIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEEAK 240
            ++ +  M+ Q   +AE +L   V + C + S CLVG   +       +  GI        E++  +K    L      N++++ SSF +G ++ D ++C  +F CE    +E   +  +QP       C   GA+CPG +IGC LCG+F PGTCGT C +AG++CG SGY C  + K
Sbjct:   17 AETLEYMQSQTALVAELSLEGRVTD-CLLRSYCLVGAHGDT---GSQVAKGIADSYAVFSEVMNTVKGSEKL-----VNMNKLKSSFELGASSTDSEICGQVFRCE---LEENFDLPEQQPRLP---ECSNIGAVCPGAAIGCTLCGMFLPGTCGTLCPMAGIFCGASGYFCMLKPK 178          
BLAST of ---NA--- vs. nr
Match: gi|1325267741|ref|XP_023342735.1| (uncharacterized protein LOC111712379 [Eurytemora affinis])

HSP 1 Score: 75.485 bits (184), Expect = 1.774e-12
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 0
Query:   71 RRQAIRIAEANLRAEVNNNCFILSMCLVG---------TKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGY 233
            R Q   I E    A  +N C    +C  G         T    E+P  ++ D   +   T+  +   ++   + +    P + R+L +  +GK       C SLF C +         + R   + GR TC+ AG +CPG+SI CA+CG+++P TCG  C  AGLYCG  GY
Sbjct:   50 REQGALITE-QFFALQDNKCLARGLCQFGAMSEKGILDTIKEYEIPNLTLDDLWSLVNETIHSVSNYVQGGDDEDKRQLPTVDRLLGAVKVGKLLG-YDSCKSLFDCSED--------LFRN--QQGRITCQGAGVICPGLSISCAMCGLYAPATCGAACTAAGLYCGFGGY 209          
The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000045703.575e-4742.78supercontig:LSalAtl2s:LSalAtl2s238:699874:700592:-... [more]
EMLSAG000000062951.946e-2631.75supercontig:LSalAtl2s:LSalAtl2s342:191019:196022:-... [more]
back to top
BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1325267816|ref|XP_023343089.1|5.852e-2333.33uncharacterized protein LOC111712640 [Eurytemora a... [more]
gi|1325267741|ref|XP_023342735.1|1.774e-1230.81uncharacterized protein LOC111712379 [Eurytemora a... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold301_size216225supercontigscaffold301_size216225:64913..66355 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold301_size216225-snap-gene-0.21-mRNA-1maker-scaffold301_size216225-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold301_size216225:64913..66355-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold301_size216225-snap-gene-0.21 ID=maker-scaffold301_size216225-snap-gene-0.21|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=1443bp|location=Sequence derived from alignment at scaffold301_size216225:64913..66355- (Tigriopus kingsejongensis)
TGAGGCCAGCTAGGTCATTTGCAAGCGGGCCAGCATCCAGCTACTAGCGT CAAAGCCCCCAACTCTTCCTCGGAAAAAGGAGAATAATATTTTGATTTCC CATCCCAAAATAGACTCAAACAAAGAGTCTGAGGGAAGCAACGCTGTGCC CCAAAAATCAACCTTGGATTGGTTGCTCTCAGTTTAGGGAAAGACAAGGA CCTGGCAAGATGCATTTCGTTAATTTGACCACCTTTTGTCTACTCATCGT TGGAGCCATGTCCCAGAAGTACTTGGAGTCTCATTCTGATCCAACTGAGA TCAATCAGGTATGTCATTCAGATCGAAGCAACGTCATGTGCAATATTAGT CGACGCTTTGTGCATTACAGGATCCGGAATCCGACATGATTCCACAAATG CGTCGCCAAGCCATTCGAATCGCCGAGGCGAATTTGCGGGCCGAAGTGAA CAATAACTGCTTCATCCTTTCCATGTGTCTCGTGGGCACGAAAACGAACG TCGAAGTGCCCCGTTATTCCATGGTGGATGGAATCCGAATGTACGTCAAT ACCCTCAGGGAAATTGTGGAGGTCATTAAAAATGACCCGAACCTGGAACC AGACAGTTTTCCCAACATTCATCGCGTGCTCTCCAGGTGAGTTTCCTGCA GTTTCACTCATGATGCACCGAAACGCCCTTTTGACCAAGGCGAGATTTCG GTAGGGGAAAACGACCCATAACCGAGATTTTGGGAACTGCGGAAGTTCCG CACTCGCAGATGATTGAATTTTGAGAAAGATAAACAAATGTTGCCTTTTT TGGTGGCCAAACCAAGAGCACCTGTATTCAATGGTCAAACCATGGGCAAC TCGATGTAAAGTAAACAGAAATTGGTGGCCAAAAAAGTATGCAGTTTGGC CAGTGTTTCCGTTCTTCAAATAGCGACGGTAATGGCACCTCGGTGTTGAA TTTGATTTCGGGATATCACTCAATTTGACATTAAATCCAAGTGACTTCAC GAGTACCTTCTTTTTCCCAGTTTTAACATCGGAAAAACAACCAAAGACAT GCAAGTCTGCTCCTCGTTATTCCCTTGCGAAGATTCCTCCACCGATGAGA CCATGGCCATGATCATGAGACAGCCCATGCGCGACGGCCGGGCCACCTGC AAGGCTGCAGGTGCCCTGTGTCCGGGCGTGTCCATCGGTTGCGCCTTGTG CGGGATCTTCTCGCCAGGAACCTGTGGCACTCAATGCATTGTGGCTGGCC TTTACTGTGGCGTGAGTGGCTACGCATGTCAAGAGGAGGCCAAGACACCT AAAACAACGACCATGGCACCGATGGCCTCCCTGTCGCCCAGGAAGGAGAA CGAAGAAATGATGACCTTCCTCTTTGGGCCCCGATTTCATTTGAAGCGTT AAGAGTCGGGGAGCAGTGAGCACCCTTGATCTCAAATCCCCGC
back to top
Synonyms
The feature '---NA---' has the following synonyms
Synonym
Tk06224
Add to Basket