---NA---, maker-scaffold301_size216225-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000004570 (supercontig:LSalAtl2s:LSalAtl2s238:699874:700592:-1 gene:EMLSAG00000004570 transcript:EMLSAT00000004570 description:"maker-LSalAtl2s238-augustus-gene-7.20") HSP 1 Score: 155.221 bits (391), Expect = 3.575e-47 Identity = 77/180 (42.78%), Postives = 118/180 (65.56%), Query Frame = 0 Query: 61 DPESDMIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEEAK 240 + E+ ++ ++R ++R+AEANL E N CF +MC VGT+ V P ++ GI + L ++++ I D + +FP+I+R ++S+ +G +TK++ +C LFPC ++T + + R+ RATC A G+LCPGVSIGCALCG+F+PGTCG QCIV G+YCGVS Y+C + K Sbjct: 26 NNEATVLQEIRLNSVRMAEANLHNE--NLCFFRTMCAVGTQRTV--PIMTLAAGIVGFRKILDKVMDDIX-DSGINEYNFPSIYRAVASYEVGISTKNLDLCEKLFPCIQTAT-HLLNEAVTVKHRNSRATCNAVGSLCPGVSIGCALCGVFAPGTCGQQCIVGGIYCGVSSYSCSYKDK 199
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000006295 (supercontig:LSalAtl2s:LSalAtl2s342:191019:196022:-1 gene:EMLSAG00000006295 transcript:EMLSAT00000006295 description:"maker-LSalAtl2s342-augustus-gene-2.18") HSP 1 Score: 107.457 bits (267), Expect = 1.946e-26 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 0 Query: 60 QDPESD----MIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEE-AKTPK 243 +DP S ++ Q+R Q+ +AE LR + C S C V +NV + + + L E+ + + FP+I +++++ +G TK+ +C LF C Q + +GR C+A ALCPG++I C LC I SP TCG C +A +YCG SGY+C ++ +K PK Sbjct: 63 KDPYSSYGRTVLTQVRMQSAIMAEKYLRTSEDTQCTKKSFCDVAALSNVNENAKATYSSVNVLTQMLDEV--------SGQDKEFPHISSLVAAYTVGTKTKNGTICKWLFACNKP-----------QEIIEGRVNCRATSALCPGIAISCGLCAIISPETCGVVCPIAAIYCGTSGYSCAKKGSKKPK 232
BLAST of ---NA--- vs. nr
Match: gi|1325267816|ref|XP_023343089.1| (uncharacterized protein LOC111712640 [Eurytemora affinis]) HSP 1 Score: 102.064 bits (253), Expect = 5.852e-23 Identity = 59/177 (33.33%), Postives = 92/177 (51.98%), Query Frame = 0 Query: 64 SDMIPQMRRQAIRIAEANLRAEVNNNCFILSMCLVGTKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGYACQEEAK 240 ++ + M+ Q +AE +L V + C + S CLVG + + GI E++ +K L N++++ SSF +G ++ D ++C +F CE +E + +QP C GA+CPG +IGC LCG+F PGTCGT C +AG++CG SGY C + K Sbjct: 17 AETLEYMQSQTALVAELSLEGRVTD-CLLRSYCLVGAHGDT---GSQVAKGIADSYAVFSEVMNTVKGSEKL-----VNMNKLKSSFELGASSTDSEICGQVFRCE---LEENFDLPEQQPRLP---ECSNIGAVCPGAAIGCTLCGMFLPGTCGTLCPMAGIFCGASGYFCMLKPK 178
BLAST of ---NA--- vs. nr
Match: gi|1325267741|ref|XP_023342735.1| (uncharacterized protein LOC111712379 [Eurytemora affinis]) HSP 1 Score: 75.485 bits (184), Expect = 1.774e-12 Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 0 Query: 71 RRQAIRIAEANLRAEVNNNCFILSMCLVG---------TKTNVEVPRYSMVDGIRMYVNTLREIVEVIKNDPNLEPDSFPNIHRVLSSFNIGKTTKDMQVCSSLFPCEDSSTDETMAMIMRQPMRDGRATCKAAGALCPGVSIGCALCGIFSPGTCGTQCIVAGLYCGVSGY 233 R Q I E A +N C +C G T E+P ++ D + T+ + ++ + + P + R+L + +GK C SLF C + + R + GR TC+ AG +CPG+SI CA+CG+++P TCG C AGLYCG GY Sbjct: 50 REQGALITE-QFFALQDNKCLARGLCQFGAMSEKGILDTIKEYEIPNLTLDDLWSLVNETIHSVSNYVQGGDDEDKRQLPTVDRLLGAVKVGKLLG-YDSCKSLFDCSED--------LFRN--QQGRITCQGAGVICPGLSISCAMCGLYAPATCGAACTAAGLYCGFGGY 209 The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold301_size216225:64913..66355- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold301_size216225-snap-gene-0.21 ID=maker-scaffold301_size216225-snap-gene-0.21|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=1443bp|location=Sequence derived from alignment at scaffold301_size216225:64913..66355- (Tigriopus kingsejongensis)back to top Synonyms
The feature '---NA---' has the following synonyms
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