histone h1, maker-scaffold328_size205007-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000000191 (supercontig:LSalAtl2s:LSalAtl2s1029:169839:170456:1 gene:EMLSAG00000000191 transcript:EMLSAT00000000191 description:"augustus_masked-LSalAtl2s1029-processed-gene-1.5") HSP 1 Score: 69.707 bits (169), Expect = 4.432e-14 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 0 Query: 28 KVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKV---DVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAK----TPKKKTATKK 132 KVAA+HP MV+AA+ LKE+ GSS AI KYI ANYKV D NAH +K A+KS L Q +G GA+G F++ K + T PKKAK T KK ++ KK Sbjct: 32 KVAASHPKYVDMVVAAIHGLKEQKGSSKHAILKYIMANYKVGDNDKHINAH-VKIALKSGSXDGXLKQVRGNGAAGXFRVTD--KKKNTSKSSPKKAKVASSTIKKDSSVKK 140 HSP 2 Score: 69.707 bits (169), Expect = 4.432e-14 Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 0 Query: 180 KVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKV---DVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAK----TPKKKTATKK 284 KVAA+HP MV+AA+ LKE+ GSS AI KYI ANYKV D NAH +K A+KS L Q +G GA+G F++ K + T PKKAK T KK ++ KK Sbjct: 32 KVAASHPKYVDMVVAAIHGLKEQKGSSKHAILKYIMANYKVGDNDKHINAH-VKIALKSGSXDGXLKQVRGNGAAGXFRVTD--KKKNTSKSSPKKAKVASSTIKKDSSVKK 140
BLAST of histone h1 vs. SwissProt
Match: gi|462228|sp|P35060.1|H1_TIGCA (RecName: Full=Histone H1) HSP 1 Score: 142.124 bits (357), Expect = 1.927e-39 Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0 Query: 167 KTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSF 254 +T KP KV+KPK THPPTSVMVMAA++ALKERNGSSLPAIKKYIAANYKVDV KNAHFIKKA+KSLVEKKKL Q KG GASGSF Sbjct: 3 ETTSAKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90 HSP 2 Score: 141.739 bits (356), Expect = 2.562e-39 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0 Query: 19 AKTKKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSF 102 AK KKV+KPK THPPTSVMVMAA++ALKERNGSSLPAIKKYIAANYKVDV KNAHFIKKA+KSLVEKKKL Q KG GASGSF Sbjct: 7 AKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90
BLAST of histone h1 vs. SwissProt
Match: gi|121949|sp|P06144.1|H1_LYTPI (RecName: Full=Late histone H1) HSP 1 Score: 98.2117 bits (243), Expect = 8.933e-23 Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 33 HPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTV 107 HPPTS MV+AA+ ALKER GSS AIKKYIAANYKVD+ K A FIK+A+K+ V L Q KG GASGSFK+ V Sbjct: 18 HPPTSQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIKRALKAGVANGTLVQVKGKGASGSFKLGKV 92 HSP 2 Score: 98.2117 bits (243), Expect = 8.933e-23 Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 185 HPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTV 259 HPPTS MV+AA+ ALKER GSS AIKKYIAANYKVD+ K A FIK+A+K+ V L Q KG GASGSFK+ V Sbjct: 18 HPPTSQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIKRALKAGVANGTLVQVKGKGASGSFKLGKV 92
BLAST of histone h1 vs. SwissProt
Match: gi|729660|sp|P40276.1|H1B_CHITE (RecName: Full=Histone H1B) HSP 1 Score: 97.8265 bits (242), Expect = 2.637e-22 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0 Query: 32 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 105 THPP S MV+ AV+ LKER GSSL AIKK++ A YKVDV K A FIKK +KS VEK +L Q KG GASGSFK+P Sbjct: 39 THPPVSEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVDKLAPFIKKYLKSAVEKGQLLQTKGKGASGSFKLP 112 HSP 2 Score: 97.8265 bits (242), Expect = 2.637e-22 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 0 Query: 184 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 257 THPP S MV+ AV+ LKER GSSL AIKK++ A YKVDV K A FIKK +KS VEK +L Q KG GASGSFK+P Sbjct: 39 THPPVSEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVDKLAPFIKKYLKSAVEKGQLLQTKGKGASGSFKLP 112
BLAST of histone h1 vs. SwissProt
Match: gi|729666|sp|P40278.1|H1E_CHITE (RecName: Full=Histone H1E) HSP 1 Score: 95.5153 bits (236), Expect = 1.523e-21 Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0 Query: 30 AATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKA-KTPKKKT 128 A THPP S MV+ A+ LKER GSSL AIKK++AA YKVDV K FIKK +K+ V K L Q KG GASGSFK+P K KV KPKKA TPK K+ Sbjct: 48 APTHPPVSEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDVEKLVPFIKKFLKASVAKGTLLQAKGKGASGSFKLPPAAK----KVDKPKKAPATPKPKS 143 HSP 2 Score: 95.5153 bits (236), Expect = 1.523e-21 Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0 Query: 182 AATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKA-KTPKKKT 280 A THPP S MV+ A+ LKER GSSL AIKK++AA YKVDV K FIKK +K+ V K L Q KG GASGSFK+P K KV KPKKA TPK K+ Sbjct: 48 APTHPPVSEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDVEKLVPFIKKFLKASVAKGTLLQAKGKGASGSFKLPPAAK----KVDKPKKAPATPKPKS 143
BLAST of histone h1 vs. SwissProt
Match: gi|121929|sp|P19375.1|H1E_STRPU (RecName: Full=Histone H1, early embryonic) HSP 1 Score: 94.7449 bits (234), Expect = 1.653e-21 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 0 Query: 31 ATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 A HPP + MV A+ LK+RNGSSL AIKKYIA N+ V + + FIK+A+KS VEK KL Q KG GASGSFK+ Sbjct: 16 AAHPPAAEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIKRALKSGVEKGKLVQTKGKGASGSFKV 89 HSP 2 Score: 70.4774 bits (171), Expect = 6.273e-13 Identity = 60/154 (38.96%), Postives = 80/154 (51.95%), Query Frame = 0 Query: 183 ATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAKTPKKKTATKKVAVEKKAKSPKKKTP-------------AKKAATKKVEKPAVVAKKPKTPKK 323 A HPP + MV A+ LK+RNGSSL AIKKYIA N+ V + + FIK+A+KS VEK KL Q KG GASGSFK+ V+ K + + K + K K ++ ++K S + +T K KK + K PK K Sbjct: 16 AAHPPAAEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIKRALKSGVEKGKLVQTKGKGASGSFKVN--VQAAKAQASEKAKKEKEKAKLLAQREKAKEKGCSEEGETAEGSRPKKVKAAPKKAKKPVKKTTEKKEKKKTPKKAPK 167
BLAST of histone h1 vs. SwissProt
Match: gi|121947|sp|P02255.1|H1_DROME (RecName: Full=Histone H1) HSP 1 Score: 95.9005 bits (237), Expect = 2.139e-21 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 0 Query: 32 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVE-----KTKVVKPKKAKTPKKKTATKKVAVEKK 138 +HPPT MV A+++ LKER GSSL AIKKYI A YK D K A FIKK +KS V KL Q KG GASGSFK+ K E K+KV+ +K K KK A+KK+ V K Sbjct: 45 SHPPTQQMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEK-KVQSKKVASKKIGVSSK 155 HSP 2 Score: 95.9005 bits (237), Expect = 2.139e-21 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 0 Query: 184 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVE-----KTKVVKPKKAKTPKKKTATKKVAVEKK 290 +HPPT MV A+++ LKER GSSL AIKKYI A YK D K A FIKK +KS V KL Q KG GASGSFK+ K E K+KV+ +K K KK A+KK+ V K Sbjct: 45 SHPPTQQMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEK-KVQSKKVASKKIGVSSK 155
BLAST of histone h1 vs. SwissProt
Match: gi|729664|sp|P40277.1|H1C_CHITE (RecName: Full=Histone H1C) HSP 1 Score: 94.3597 bits (233), Expect = 3.522e-21 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 0 Query: 32 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 105 THPP S MV AV+ LKER GSSL AIKK++ A YKVDV K FIKK +KS VEK +L Q KG GA GSFK+P Sbjct: 38 THPPVSEMVFNAVKTLKERGGSSLQAIKKFLIAQYKVDVDKLDTFIKKYLKSAVEKGQLLQTKGKGALGSFKLP 111 HSP 2 Score: 94.3597 bits (233), Expect = 3.522e-21 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 0 Query: 184 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 257 THPP S MV AV+ LKER GSSL AIKK++ A YKVDV K FIKK +KS VEK +L Q KG GA GSFK+P Sbjct: 38 THPPVSEMVFNAVKTLKERGGSSLQAIKKFLIAQYKVDVDKLDTFIKKYLKSAVEKGQLLQTKGKGALGSFKLP 111
BLAST of histone h1 vs. SwissProt
Match: gi|729656|sp|P40265.1|H13_GLYBA (RecName: Full=Histone H1-III) HSP 1 Score: 94.3597 bits (233), Expect = 3.814e-21 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0 Query: 32 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 105 THPP S MV+ A++ LKER GSSL AIKK++AA YKVDV K A FIKK ++ V K +L Q KG GASGSFK+P Sbjct: 39 THPPVSEMVVNAIKTLKERGGSSLQAIKKFLAAQYKVDVDKLAPFIKKYLRGAVTKGELLQTKGKGASGSFKLP 112 HSP 2 Score: 94.3597 bits (233), Expect = 3.814e-21 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0 Query: 184 THPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 257 THPP S MV+ A++ LKER GSSL AIKK++AA YKVDV K A FIKK ++ V K +L Q KG GASGSFK+P Sbjct: 39 THPPVSEMVVNAIKTLKERGGSSLQAIKKFLAAQYKVDVDKLAPFIKKYLRGAVTKGELLQTKGKGASGSFKLP 112
BLAST of histone h1 vs. SwissProt
Match: gi|121921|sp|P15869.1|H1B_STRPU (RecName: Full=Histone H1-beta, late embryonic) HSP 1 Score: 93.9745 bits (232), Expect = 4.133e-21 Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 0 Query: 19 AKTKKVAK-PKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 A+ KKVAK P+ HP +S MV+AA+ ALKER GSS AI+KYI NY VD+ K A FIK+A+ + VEK L Q KG GASGSFK+ Sbjct: 3 AEQKKVAKKPRAKPAHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEKGTLVQVKGKGASGSFKL 89 HSP 2 Score: 91.2781 bits (225), Expect = 2.889e-20 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 KP+ HP +S MV+AA+ ALKER GSS AI+KYI NY VD+ K A FIK+A+ + VEK L Q KG GASGSFK+ Sbjct: 11 KPRAKPAHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEKGTLVQVKGKGASGSFKL 89
BLAST of histone h1 vs. SwissProt
Match: gi|1708097|sp|Q07134.1|H1O_CHITH (RecName: Full=Histone H1, orphon) HSP 1 Score: 93.9745 bits (232), Expect = 6.785e-21 Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 29 VAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 105 VA THPP S MV+ AV LKER GSSL AIKK++AA YKVDV K FIKK +KS V K L Q KG GASGSFK+P Sbjct: 50 VAPTHPPVSEMVVNAVTTLKERGGSSLIAIKKFVAAQYKVDVEKLVPFIKKFLKSSVAKGTLLQAKGKGASGSFKLP 126 HSP 2 Score: 93.9745 bits (232), Expect = 6.785e-21 Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 181 VAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIP 257 VA THPP S MV+ AV LKER GSSL AIKK++AA YKVDV K FIKK +KS V K L Q KG GASGSFK+P Sbjct: 50 VAPTHPPVSEMVVNAVTTLKERGGSSLIAIKKFVAAQYKVDVEKLVPFIKKFLKSSVAKGTLLQAKGKGASGSFKLP 126
BLAST of histone h1 vs. nr
Match: gi|462228|sp|P35060.1|H1_TIGCA (RecName: Full=Histone H1 >gi|161894|gb|AAC41551.1| histone H1 [Tigriopus californicus] >gi|260525|gb|AAA12276.1| histone H1 [Tigriopus californicus]) HSP 1 Score: 142.124 bits (357), Expect = 5.974e-37 Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0 Query: 167 KTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSF 254 +T KP KV+KPK THPPTSVMVMAA++ALKERNGSSLPAIKKYIAANYKVDV KNAHFIKKA+KSLVEKKKL Q KG GASGSF Sbjct: 3 ETTSAKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90 HSP 2 Score: 141.739 bits (356), Expect = 7.942e-37 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0 Query: 19 AKTKKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSF 102 AK KKV+KPK THPPTSVMVMAA++ALKERNGSSLPAIKKYIAANYKVDV KNAHFIKKA+KSLVEKKKL Q KG GASGSF Sbjct: 7 AKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90
BLAST of histone h1 vs. nr
Match: gi|1126183567|ref|XP_019624357.1| (PREDICTED: LOW QUALITY PROTEIN: histone H1-like [Branchiostoma belcheri]) HSP 1 Score: 124.02 bits (310), Expect = 3.206e-29 Identity = 63/93 (67.74%), Postives = 73/93 (78.49%), Query Frame = 0 Query: 12 VTMSDSPAKTKKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 V MS + + KK +KPK A HPPT+ M+ AAV ALK+R GSS+PAIKKYIAANYK DV K AHFIK+A+K+LVEK L Q KGTGASGSFKI Sbjct: 14 VDMSTAASSPKKASKPKAPAAHPPTTAMITAAVEALKDRTGSSVPAIKKYIAANYKFDVEKKAHFIKRALKALVEKGTLLQVKGTGASGSFKI 106 HSP 2 Score: 121.324 bits (303), Expect = 4.152e-28 Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0 Query: 173 PAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 P K +KPK A HPPT+ M+ AAV ALK+R GSS+PAIKKYIAANYK DV K AHFIK+A+K+LVEK L Q KGTGASGSFKI Sbjct: 23 PKKASKPKAPAAHPPTTAMITAAVEALKDRTGSSVPAIKKYIAANYKFDVEKKAHFIKRALKALVEKGTLLQVKGTGASGSFKI 106
BLAST of histone h1 vs. nr
Match: gi|1218253651|ref|XP_021706535.1| (histone H1-like [Aedes aegypti]) HSP 1 Score: 118.242 bits (295), Expect = 1.530e-27 Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 0 Query: 164 KKPKTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAKTPKKKTATKKVAVEKKAKSP 294 KKP+ PK + KPK +THPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK A F+KKA+K+ VEK K Q KGTGASGSFK+ + K K K T +KK ATKK A EKKAK P Sbjct: 21 KKPRAPKGQ----GKPKKPSTHPPVNDMVVAAIKTLKERNGSSLQAIKKYIAANYKCDVAKLAPFLKKALKNGVEKGKFVQTKGTGASGSFKL----EEPKKAGEKKAKKATGEKKKATKKPAGEKKAKKP 143 HSP 2 Score: 115.546 bits (288), Expect = 1.415e-26 Identity = 73/118 (61.86%), Postives = 84/118 (71.19%), Query Frame = 0 Query: 25 AKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAKTPKKKTATKKVAVEKKAKSP 142 KPK +THPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK A F+KKA+K+ VEK K Q KGTGASGSFK+ + K K K T +KK ATKK A EKKAK P Sbjct: 30 GKPKKPSTHPPVNDMVVAAIKTLKERNGSSLQAIKKYIAANYKCDVAKLAPFLKKALKNGVEKGKFVQTKGTGASGSFKL----EEPKKAGEKKAKKATGEKKKATKKPAGEKKAKKP 143
BLAST of histone h1 vs. nr
Match: gi|170053436|ref|XP_001862672.1| (histone H1 [Culex quinquefasciatus] >gi|167873981|gb|EDS37364.1| histone H1 [Culex quinquefasciatus]) HSP 1 Score: 115.546 bits (288), Expect = 2.414e-26 Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = 0 Query: 26 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAKTPKKKTA 129 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI K + KP K PKK T Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI-------KAEAKKPAGEKKPKKATG 131 HSP 2 Score: 115.546 bits (288), Expect = 2.414e-26 Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKIPTVVKVEKTKVVKPKKAKTPKKKTA 281 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI K + KP K PKK T Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI-------KAEAKKPAGEKKPKKATG 131
BLAST of histone h1 vs. nr
Match: gi|1000112380|gb|KXJ62373.1| (hypothetical protein RP20_CCG015761 [Aedes albopictus] >gi|1000117158|gb|KXJ62443.1| hypothetical protein RP20_CCG009461 [Aedes albopictus]) HSP 1 Score: 115.546 bits (288), Expect = 2.984e-26 Identity = 62/94 (65.96%), Postives = 71/94 (75.53%), Query Frame = 0 Query: 163 AKKPKTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 AKKP+TPK + KPK HPP + MV+AA+R LKERNGSSL AIKKYIAANYK DV K A F+KKA+K+ VEK L Q KGTGASGSFK+ Sbjct: 26 AKKPRTPKGE----GKPKA---HPPVNEMVVAAIRTLKERNGSSLQAIKKYIAANYKCDVTKLARFVKKALKNGVEKGTLVQTKGTGASGSFKL 112
BLAST of histone h1 vs. nr
Match: gi|1000158834|gb|KXJ62550.1| (hypothetical protein RP20_CCG026159 [Aedes albopictus]) HSP 1 Score: 115.546 bits (288), Expect = 3.141e-26 Identity = 62/94 (65.96%), Postives = 71/94 (75.53%), Query Frame = 0 Query: 163 AKKPKTPKKKPAKVAKPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 AKKP+TPK + KPK HPP + MV+AA+R LKERNGSSL AIKKYIAANYK DV K A F+KKA+K+ VEK L Q KGTGASGSFK+ Sbjct: 26 AKKPRTPKGE----GKPKA---HPPVNEMVVAAIRTLKERNGSSLQAIKKYIAANYKCDVTKLARFVKKALKNGVEKGTLVQTKGTGASGSFKL 112
BLAST of histone h1 vs. nr
Match: gi|170053428|ref|XP_001862668.1| (histone H1 [Culex quinquefasciatus] >gi|170053455|ref|XP_001862681.1| histone H1 [Culex quinquefasciatus] >gi|170053474|ref|XP_001862690.1| histone H1 [Culex quinquefasciatus] >gi|167873977|gb|EDS37360.1| histone H1 [Culex quinquefasciatus] >gi|167873990|gb|EDS37373.1| histone H1 [Culex quinquefasciatus] >gi|167873999|gb|EDS37382.1| histone H1 [Culex quinquefasciatus]) HSP 1 Score: 114.775 bits (286), Expect = 4.651e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 26 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113 HSP 2 Score: 114.775 bits (286), Expect = 4.651e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113
BLAST of histone h1 vs. nr
Match: gi|170053413|ref|XP_001862661.1| (histone H1 [Culex quinquefasciatus] >gi|170053478|ref|XP_001862692.1| histone H1 [Culex quinquefasciatus] >gi|170053501|ref|XP_001862703.1| histone H1 [Culex quinquefasciatus] >gi|167873970|gb|EDS37353.1| histone H1 [Culex quinquefasciatus] >gi|167874001|gb|EDS37384.1| histone H1 [Culex quinquefasciatus] >gi|167874012|gb|EDS37395.1| histone H1 [Culex quinquefasciatus]) HSP 1 Score: 114.775 bits (286), Expect = 6.070e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 26 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113 HSP 2 Score: 114.775 bits (286), Expect = 6.070e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113
BLAST of histone h1 vs. nr
Match: gi|170053396|ref|XP_001862653.1| (histone H1 [Culex quinquefasciatus] >gi|167873962|gb|EDS37345.1| histone H1 [Culex quinquefasciatus]) HSP 1 Score: 114.39 bits (285), Expect = 7.223e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 26 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113 HSP 2 Score: 114.39 bits (285), Expect = 7.223e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113
BLAST of histone h1 vs. nr
Match: gi|170053509|ref|XP_001862707.1| (histone H1 [Culex quinquefasciatus] >gi|170053518|ref|XP_001862711.1| histone H1 [Culex quinquefasciatus] >gi|170053526|ref|XP_001862715.1| histone H1 [Culex quinquefasciatus] >gi|170053535|ref|XP_001862719.1| histone H1 [Culex quinquefasciatus] >gi|170053543|ref|XP_001862723.1| histone H1 [Culex quinquefasciatus] >gi|170053551|ref|XP_001862727.1| histone H1 [Culex quinquefasciatus] >gi|167874016|gb|EDS37399.1| histone H1 [Culex quinquefasciatus] >gi|167874020|gb|EDS37403.1| histone H1 [Culex quinquefasciatus] >gi|167874024|gb|EDS37407.1| histone H1 [Culex quinquefasciatus] >gi|167874028|gb|EDS37411.1| histone H1 [Culex quinquefasciatus] >gi|167874032|gb|EDS37415.1| histone H1 [Culex quinquefasciatus] >gi|167874036|gb|EDS37419.1| histone H1 [Culex quinquefasciatus]) HSP 1 Score: 114.39 bits (285), Expect = 7.839e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 26 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 104 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113 HSP 2 Score: 114.39 bits (285), Expect = 7.839e-26 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0 Query: 178 KPKVAATHPPTSVMVMAAVRALKERNGSSLPAIKKYIAANYKVDVAKNAHFIKKAVKSLVEKKKLTQPKGTGASGSFKI 256 KPK ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL Q KG+GASGSFKI Sbjct: 35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKI 113 The following BLAST results are available for this feature:
BLAST of histone h1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of histone h1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of histone h1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold328_size205007:16204..21096+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold328_size205007-snap-gene-0.14 ID=maker-scaffold328_size205007-snap-gene-0.14|Name=histone h1|organism=Tigriopus kingsejongensis|type=gene|length=4893bp|location=Sequence derived from alignment at scaffold328_size205007:16204..21096+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h1' has the following synonyms
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