regulator of nonsense transcripts, maker-scaffold33_size549341-snap-gene-0.19 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000005015 (supercontig:LSalAtl2s:LSalAtl2s260:591600:598646:1 gene:EMLSAG00000005015 transcript:EMLSAT00000005015 description:"maker-LSalAtl2s260-augustus-gene-6.11") HSP 1 Score: 1380.16 bits (3571), Expect = 0.000e+0 Identity = 715/1167 (61.27%), Postives = 844/1167 (72.32%), Query Frame = 0
Query: 12 EDQDLALGDTQGDEFGFQFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAA---------VAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNA-LKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPE-QLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNN----FNRGSQFIAHDN-------------MNAIQE-------DF----SKLQTSMP-----IPVGMFVNMSHIPPRFLPKTERPNHYRQG-AGGGNTQASMLSQDMERTQNN--------TLTQGN--------NLSLGMSLNDYGSEFSQGEMSQD--VGRGLRSTTDGFLSQDSMYQGPRYNSQ 1115
E++D +TQG++F F FTLPSQS+ E +A G + ++Q + P G + +D + L A + ++ +P +C+YCG DP+ VV C C+KWFCN RGNTSGSHIVNHLVRA+HKEV LHKDGPLGETVLECYSCG RNV VLGFIPAKADSVV+LLCR PCA QN+ LKDMNW+Q+QW+PLI +RSFLSWLVKVPSD E Q +AR I+ATQ+N+LE+MWK+N++ADF D++A G ++P V LRYEDGYQYQNIFGPLV LEA YDK+ KESQTQ++IDVRWD GLNKK +A+F+L KNDSDL+LM GDEL LRY GD W +GHVIKIPDN+GDEVGIE+KSN PT T F IDFVWK+TSFDRMQ ALKKF + SVSSYIY++LLG +VEDV+FR QLPRHFSA NLP+LNRSQVYAV+ ALQRPLSLIQGPPGTGKTVTSATIV+QLVKQ+GGPVLVCAPSNTA DQLT+K+ +TGLK VR+CAK+REAIDSPVAHLALHNQI+N++ S+ RKLQQLKDETGELS +DE R+R LRK +E+ +L VADV+ CTCI AGD R+ M+F SILIDESMQATEPECMVPVVLGA QLILVGDHCQLGPVVMCKKA+ GGLSQSLFERLV+LGIRP RLEVQYRMHPELS FPSNFFY+G+LQNGVSGEDR+L IDFPWP DKP FFY ++GQEEIAGSGTSYLNRTEA+NVEK TT+FI+AG++ +QIGIITPYEGQRAYLVQ+MQYQGS + K+YQ EIASVDAFQGREKDIIIISCVRSND+QGIGFLADPRRLNVALTRAKYA I+VGNPKVL+KQ LWN+LL HYKD+G LVEGPI+NMK S IQF KP++L N+ NPG HF+ T AK +A + S + PP + NN FN GS ++DN NAI +F + ++P +P+GMF+NMSHIPPRF + ++ + G N+ A S+ +Q+ LTQG LS G+S FSQ + SQD + L+S DG LSQDS YQG R SQ
Sbjct: 45 EEEDFIAPETQGEDFQFSFTLPSQSE--------------------EPSSAPGP-----GSSKIQ-----------SKTTPNGGLPRTQTPTNDIPSNNLNGASEELEFEDDDDEENNKREIPEAACRYCGFLDPACVVQCNACRKWFCNSRGNTSGSHIVNHLVRARHKEVTLHKDGPLGETVLECYSCGVRNVMVLGFIPAKADSVVVLLCRQPCAIQNSSLKDMNWDQDQWKPLISERSFLSWLVKVPSDAEMQRKARAITATQINQLEEMWKENVDADFQDIDASGEMNDPQSVQLRYEDGYQYQNIFGPLVNLEASYDKRLKESQTQDSIDVRWDMGLNKKVLAFFHLPKNDSDLRLMHGDELNLRYNGD-NHTWKSVGHVIKIPDNFGDEVGIELKSNLEAPTYLTHKFAIDFVWKSTSFDRMQKALKKFTDEGLSVSSYIYNRLLGKQVEDVIFRCQLPRHFSAPNLPDLNRSQVYAVRRALQRPLSLIQGPPGTGKTVTSATIVYQLVKQRGGPVLVCAPSNTAXDQLTEKIHRTGLKCVRLCAKTREAIDSPVAHLALHNQIRNID--SDFRKLQQLKDETGELSKADEIRYRMLRKSSERNILKVADVICCTCIAAGDLRINHMRFASILIDESMQATEPECMVPVVLGANQLILVGDHCQLGPVVMCKKASLGGLSQSLFERLVMLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVSGEDRKLNIDFPWPVPDKPMFFYVTSGQEEIAGSGTSYLNRTEAANVEKFTTRFIKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLNTKLYQECEIASVDAFQGREKDIIIISCVRSNDHQGIGFLADPRRLNVALTRAKYAVIVVGNPKVLSKQPLWNNLLHHYKDHGCLVEGPISNMKESLIQFAKPQKLTNSVNPGAHFLKTNTIDAKTYMAYKNSPTISVSPSNMFNPSQFSRPPPNFSGQKSNNSSGPFNGGSASGSNDNNRMSSKRMHGVCRNNAIDNTPRHDKINFIGSGKSMNLNIPPSQLMVPIGMFMNMSHIPPRFYNQHQQVMASKMGDQNSNNSNAKTSSRSFTXSQDGYSQSLNSAALTQGGLSQGGTAAXLSTGLS-----QGFSQTDFSQDSILVSELQSQMDGMLSQDSTYQGGRLASQ 1167
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000009428 (supercontig:LSalAtl2s:LSalAtl2s600:488026:492190:-1 gene:EMLSAG00000009428 transcript:EMLSAT00000009428 description:"maker-LSalAtl2s600-snap-gene-3.46") HSP 1 Score: 195.282 bits (495), Expect = 2.774e-51 Identity = 149/425 (35.06%), Postives = 213/425 (50.12%), Query Frame = 0
Query: 493 LSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHL-ALHNQIKNLEGFSELRK-----LQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGA----GDPRVIRMK------FPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLR-LEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFF--------------YASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAK 886
+ +I GPPGTGKT T IV Q VK G VL APSN AVD L ++L + LK VR+ +R + D L AL + + ++RK L+ + E+ + K A KE+ S A V+ T + + G +V++ K F ++IDE QA E C + + A + IL GDHCQL P VM ++A G + +L ERLV +R LE+QYRM+ + ++ S FY+ L+ G +R+ ID P + ++ T + + G EE G N EAS V K I AG+ I +ITPY Q + Q+ G P E+ SVD FQG+EK+ +I+S VRSN+ +GFLA+ RRLNVA+TRAK +V + + L+K
Sbjct: 167 IGIIHGPPGTGKTTTVVEIVSQAVKS-GCKVLCVAPSNVAVDNLLERLVKNKLKCVRIGHPARISADLQKYSLDALIDSSDQTQIVRDVRKDIDLALKNARKNRNEIKELRRECREREGK-AIKEIFSRAQVILTTLVSSDSVSGPLKVLKNKNDTSYPFDLVVIDECSQALELSCWISLP-QAPKAILSGDHCQLPPTVMSQEAISKGFANTLMERLVKSHPVAVRVLEIQYRMNNSIMNWSSKEFYESKLKAGSDEVGKRVLIDLPGIENNEETSVPIILIDTAGXXMHEFVADGDEENGSKG----NEGEASLVVSHVRKLIDAGMNPSDIAVITPYNLQVELIRS--QFSGDKRP------EVRSVDGFQGQEKEAVILSLVRSNEKGNVGFLAESRRLNVAVTRAKRHLAVVCDSETLSK 576
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000003665 (supercontig:LSalAtl2s:LSalAtl2s19:264402:269259:-1 gene:EMLSAG00000003665 transcript:EMLSAT00000003665 description:"maker-LSalAtl2s19-snap-gene-2.18") HSP 1 Score: 191.43 bits (485), Expect = 1.598e-49 Identity = 173/564 (30.67%), Postives = 269/564 (47.70%), Query Frame = 0
Query: 432 ALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQ------RP---LSLIQGPPGTGKTVTSATIVFQLV-------KQKGGPVLVCAPSNTAVDQLTQKLDQTG--LKVVRVCA----------------------------KSREAIDSPVAHLA-----LHNQIKNLEGFSELRKLQ-QLKDETGELSSSDEKRFRSL--------RKQAEKELLSVADVVSCTCI----GAGDPRVIRMK------FPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVV------LGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKF-----IRAGIRADQIGIITPYEGQRAYL---VQFMQYQGSHHPKIYQS-IEIASVDAFQGREKDIIIISCVRS---NDYQ---GIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILV 904
+L+ F+ + S ++ LL HE + + + A +L +LN Q V + +P LSLIQGPPGTGK+ +++V Q++ ++K +L+ APSN+A+D L +KL + +K++RV + E+I + H + ++I+ S++ LQ +LKDET +L + +K ++L R++ + L AD+V+ T G +R K F ++DE+ Q EPE ++P+ LG +L++VGD QL V KA QSLF RL L++QYRMH +++ +P+++FY G L NGVS R + FP F S + E + S N EA V L ++ I G + IG+IT Y QR +L +Q + + S +I +S + + +VD FQG E DII++SCVRS ND IGF + RLNVALTRAKYA IVG+ + L+K L+W+ LL+ + +V
Sbjct: 917 SLRLFSAVIDAKKSPLFPSLLRHEDSSSVKAISSSQAYDAPHLNKLNPIQRKIVIDTAETCILSPKPSAFLSLIQGPPGTGKSTVISSLVIQIMSRFNIQGEKKPPKILLVAPSNSAIDSLVKKLRRLAPEMKLIRVGQLNSMDKQVKEIELTRIVNNKLNEMESQLGTNESIQREITHRQEEINHIGHEIEKAISSSKINLLQRKLKDETFKLKRA-KKSIQTLSNYEKDKKRQEITRTTLDDADIVATTLSSSLNGQMXSHFLRDKYKPGRNFSICIVDEASQCVEPEGLIPLKLGFSKLVMVGDPEQLPATVSSIKAKDLSYGQSLFNRLFKSSRNSDTNTSIHCLKIQYRMHGDIARWPNHYFYGGELTNGVSWTSRNSDL-FPL------KLFDLSWTKMEETNNEKSIFNTKEAKFVATLISEIKKEPHIIPGNKT--IGVITFYSQQRKHLSLELQNLGIETSDGKRISKSAVTVCTVDGFQGSEXDIIVLSCVRSSKQNDIHTSSSIGFTGESERLNVALTRAKYALYIVGDFQTLSKSLMWSDLLKDVRKRKCIV 1470
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000010050 (supercontig:LSalAtl2s:LSalAtl2s662:147778:155854:1 gene:EMLSAG00000010050 transcript:EMLSAT00000010050 description:"maker-LSalAtl2s662-augustus-gene-1.18") HSP 1 Score: 161.77 bits (408), Expect = 2.120e-41 Identity = 152/485 (31.34%), Postives = 218/485 (44.95%), Query Frame = 0
Query: 458 DVLF----------RSQLPRHFSADNLPELNRSQVYAVKHAL---QRPL-SLIQGPPGTGKTVTSATIVFQLVKQ-KGGPVLVCAPSNTAVDQLTQKL--DQTGLKVVRVCA-KSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVV--LGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLR-------------LEVQYRMHPELSSFPSNFFYDGTLQN------GVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAG-IRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRS-NDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNG 901
DVLF R Q F NL N Q A++H L P +I GPPGTGK+ T A + Q+ K +LVCAPSNTA D +T+K D V+ V A + +E DS QI G SE + + + + +K F ++S + +G +++ F + DE+ ++EPEC++ + L ++L GDH QLGPVV+ + GL+ SL ERL+ +R L YR L S FYDG L V+ + FP+ F G + S+ N TE V+K+ K + I IG+I+PY Q + M Y P++ E S + FQGREKDIIIIS RS N+ + +GFL + +R NVA+TRAKY I+VG+ K+L +W+ L+ + K+NG
Sbjct: 193 DVLFPSKSKKINVGRRQKIYRFFNKNL-GCNEKQTQAIEHILGFSSYPFPYIIFGPPGTGKSSTVAEAIKQVHHDPKKTRILVCAPSNTAXDVVTEKXLDDIXPCSVLHVVAARHKEKYDSKTGPFKESLQI----GGSEWQIVNWI-------VCNKDKSFV---------------ILSTSVMGYVVSKMVGKLFTHVFYDEAGFSSEPECLLAIKPHLNHALIVLSGDHYQLGPVVLSQNTF--GLTISLMERLMTCDPYYMRGSGHTYNPKYVTKLVDNYRSDFRLLKLSSEIFYDGELVARSLPCLSVTRARENMGYRFPF-------VFIDVRGDMVRPKNCKSFFNNTEVEIVQKIANKLLAMDDISQKSIGLISPYRPQYMQMGSIMHYC----PRM----EYGSPELFQGREKDIIIISTARSSNNSKTLGFLTNFKRFNVAITRAKYLCIVVGDSKLLEMDPVWSSLVNYIKENG 633
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000004276 (supercontig:LSalAtl2s:LSalAtl2s224:316115:320975:1 gene:EMLSAG00000004276 transcript:EMLSAT00000004276 description:"maker-LSalAtl2s224-augustus-gene-3.17") HSP 1 Score: 160.229 bits (404), Expect = 4.798e-40 Identity = 145/475 (30.53%), Postives = 205/475 (43.16%), Query Frame = 0
Query: 475 PELNRSQVYAVKHALQ---RPLS-LIQGPPGTGKTVTSATIVFQL-VKQKGGPVLVCAPSNTAVDQLTQKLDQTGL----KVVRVCAKSREAIDSPVAHLALHNQIKN----LEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVP---VVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPL----------------------RLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRA-GIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQG-------IGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGIL 903
P LN Q AV+ L+ RP+ +I GPPGTGKTVT + Q+ + +K +LV APSN A D L L + VVR+ R+ + P + + IKN +EG + R + T SSS R + R+ F + +DE+ EP+ + P V + Q++L GD QL PV+ A + GL+ SL ERL PL +L YR HP + PS FY L VS D + D P F+A G++ S+ N EA + K I DQ+GIITPY Q + ++Q PK+ SV+ FQG+E+ II++S VRS+ +GF+ D +R NVALTRAK IIVGNPKVL + +W +++ N ++
Sbjct: 675 PYLNPEQKQAVRSILKGEARPIPYIIFGPPGTGKTVTLLETILQIFILRKDSRILVTAPSNAACDLLLNLLAASKKVKPGDVVRILGARRKFENIPEYLIPYYFSIKNEKETMEGVLKSRIVV-----TTCTSSSFFSRIKDFRR-----------------------------FTHVFVDEAGFVLEPDILTPLNFVDIEEGQIVLAGDEKQLSPVLSSSLAKEFGLAYSLIERLC--SFNPLYAPDPNKFVTRFSDSYDSLLITKLVRNYRNHPAILKLPSKLFYHDELIPSVSNNQSFKGYDILLNE-DFPIVFHALDGEQRRDEDSPSWYNYQEAFQIVLYLRKLYSIPRISEDQVGIITPYRKQVDCIKSYIQSFDLPIPKV------GSVEEFQGQERLIILLSTVRSSXLDTPASTKHVLGFVGDEKRFNVALTRAKDLLIIVGNPKVLIQDSVWKEFIEYCDRNHVI 1106
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000003094 (supercontig:LSalAtl2s:LSalAtl2s173:343286:346696:-1 gene:EMLSAG00000003094 transcript:EMLSAT00000003094 description:"maker-LSalAtl2s173-snap-gene-3.31") HSP 1 Score: 129.413 bits (324), Expect = 1.526e-30 Identity = 160/593 (26.98%), Postives = 248/593 (41.82%), Query Frame = 0
Query: 359 DLKLMPGDELRLRYLGDLAK---PWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECT-----KNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQ------------LPRHFSADNLP---ELNRSQVYAV-KHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKL---DQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNG-------VSGEDRRLAIDFPWPQ-ADKPTF----FYASTGQEEIAGSGTSY--LNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSND------YQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHY-KDNGIL 903
+L L+ ++++ + GD+A P +G I + + + + + + I TE +N D WK F + K+ SS + KL+ E RS LP+ + + P LNR Q A+ K + + ++G PGTGKT ++ L VL+ + +NTA D + KL D G +R+ +SR + L+N + F S + + E +L VV TC+G P + +F ++DE+ QA+ + P+ AK ILVGD QL PVV +A G+S+S+F L+ + L +QYRM+ ++ + Y G L+ G + ED D W + A P+ + TG + SY N E +E+L + I+ G D IG+I PY+ Q + L K + I++ +VD FQG++KDII SC R + L D RRLNVA+TRAK I+VGN L +N LL + KD I+
Sbjct: 486 NLTLIRENDMKHSFRGDMANLSNPPFAIGETILV--STKNAIALAQGTVYRIGTEVIEVILDRNLYKDQEWKNCIF-----CIDKYEYVPSSAALVNLAKLMSDTEESKKLRSLIIDKRQVEFLQGLPKEVAINAKPILKTLNRVQQKAIFKTLMAKDNICLKGMPGTGKTTLIVALIRLLAMTMKKSVLLTSYTNTAXDNVXLKLLSFDDVGF--IRLGRRSR-------INPRLYNHM-----------------------------FES-QTEFEDKL-----VVGTTCLGLNHPAITSRRFDYCILDEAGQASLLSSVGPL-FHAKVFILVGDPEQLRPVVRSVQARSLGMSESIFS-LMERENNVIPLTLQYRMNSRITECANFLTYKGELECGNTQVASNILKEDHSHDSDPSWVKSALDPSLHQSIVFLDTGSRGVESRHGSYGITNTHECEIIEQLLNR-IKGGNDYD-IGVIAPYQAQVSLL-----------RKKFNGIDVNTVDQFQGKDKDIIFYSCTRCSSNIKDEAKSSESILNDERRLNVAITRAKMKIILVGNRDTLVNFKPFNKLLTLFLKDECII 1012
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000000606 (supercontig:LSalAtl2s:LSalAtl2s109:446994:450007:1 gene:EMLSAG00000000606 transcript:EMLSAT00000000606 description:"maker-LSalAtl2s109-augustus-gene-4.29") HSP 1 Score: 117.472 bits (293), Expect = 3.249e-28 Identity = 91/319 (28.53%), Postives = 152/319 (47.65%), Query Frame = 0
Query: 599 KRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLR-LEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPW--PQADKPTFFYASTGQ----------EEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILV 904
K+ + L ++A+KE ++ T + + F + IDE+ ++ ++ + L A ++IL GDHCQL P+ +A G S E+L L + L +QYR + +S + S + Y L+ + + L P + ++P F + GQ E + + S +N EA VE + K+I G+ I ++ + ++ H + I I +VD+FQG+EK++IIIS VRSN Y IGFL + RR+NV++TRA+ IIVG+ + L L+ DN ++V
Sbjct: 91 KKHKILIERAKKESSIFVTTIASTSLDTYK----KYNFDLVCIDEAGFVSQGNSLLHI-LRAPRIILCGDHCQLPPITFNPDSALEGYEISAMEKLTKLLPNCVSFLSIQYRSNQIISEWSSRYIYYNKLRTSSTVANITLQDLIPHQNSELNRPFVFIDTKGQGYHEEQDEGSEFMTDADKSIVNLNEAFLVEIIVNKYIELGVSPKVISVLRS-----------LIWKSDH----LRDISIYTVDSFQGKEKEMIIISFVRSNPYGEIGFLRETRRINVSVTRARRCVIIVGDSETLCHDPALKDLVDFCSDNELIV 389
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000012979 (supercontig:LSalAtl2s:LSalAtl2s98:187656:193333:1 gene:EMLSAG00000012979 transcript:EMLSAT00000012979 description:"maker-LSalAtl2s98-augustus-gene-2.15") HSP 1 Score: 111.309 bits (277), Expect = 7.270e-25 Identity = 120/426 (28.17%), Postives = 191/426 (44.84%), Query Frame = 0
Query: 492 PLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQ---TGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGE--LSSSDEKRFRSLRKQAEKELLSVADVV-----SCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQ--LILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIR---PLRLEV--QYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTE----ASNVEKLTTKFIRAGIRADQ--IGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDY---------QGIGFLADPRRLNVALTRAKYAAIIVGNPKVLA 885
P LI GP GTGKT T + L+K + +LVC SN+A D ++ T +K R + E SP IK L + E R ++ + D + L ++ E R+ R +E++ VV S + G G + + F +LIDE+ QA E E ++ + L + Q ++L GDH QL P V K A + ++SL ERL + P ++ + YR H + + S FY+ L SG+ R + +P + + G++ + TS+ N E V +L + ++ R D+ IGI+TPY Q VQ ++ + S+E V QG++ I +S VR+ GFL++ + LN A+TRA+ +VG+P L
Sbjct: 695 PPILIIGPYGTGKTFTLGQSLKMLLKDRSNRILVCTHSNSAADLYIREYLHPYVTEMKAARDNVEETET--SP---------IKVLRVYYENRWVKTVHDTVLKYCLVTTTEHS-RNFRNPTFEEVVDCHIVVXTLSTSKSLTGLG---LTKGHFTHVLIDEAAQAMECEAIMALALASTQTRVVLAGDHMQLSPEVFSKLALEKKFNKSLLERLYDFYPKSNFPCKILLIENYRSHRAIIEYTSELFYEQKLL--ASGKQTRHDLWYPLT-------LFTARGEDVQDLNSTSFYNNAEVYEVVERVTQLQLTWPKSWGRRDETSIGIVTPYYDQ----VQRIRSELRKRNLFGVSVE--RVLNVQGKQFRAIFLSTVRTRKTCVMSQEDPEVDFGFLSNAKLLNTAITRAQSLVAVVGDPVALC 1090
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000009713 (supercontig:LSalAtl2s:LSalAtl2s627:13248:23312:1 gene:EMLSAG00000009713 transcript:EMLSAT00000009713 description:"maker-LSalAtl2s627-augustus-gene-0.35") HSP 1 Score: 102.834 bits (255), Expect = 2.910e-22 Identity = 98/350 (28.00%), Postives = 155/350 (44.29%), Query Frame = 0
Query: 616 ADVVSCTCIGAGDPRV----IRMKFPSILIDESMQATEPECMVPVVLG--------AKQLILVGDHCQLGPVVMCKKAAK-GGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYD--GTLQ-----------NGVSGEDRRL--AIDFPWPQADKPT-FFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMN 936
A +++ TC A R I K+ +IL++ES Q E E +P++L K+ I++GDH QL PV+ K + QSLF RLV LG+ + L+ Q R P L S N+ Y G L NG D +L DF +P+ FFY + + E + Y+ G A +I I+T Y GQ+ + + + + + + +I +VD +QG++ D I++S VR+ + +G L D RRL VA++RAK V A+ L+ + + IL + P+ + P + + KR N P +N
Sbjct: 1220 AKIIAMTCTHAALKRKELAEIGFKYDNILMEESAQILEIETFIPLLLQNPQDNHNRLKRWIMIGDHHQLPPVIKNAAFQKFSNMEQSLFTRLVRLGVPTIELDAQGRARPSLCSL-YNWRYKSLGNLHHVLENNEYLNANGGFSFDYQLINVADFQGVGESQPSPFFYQNLAEAEYVVATFMYMRL---------------LGYPAGKISILTTYNGQKHLIRDVVNSRCAKNSMVGVPYKITTVDKYQGQQNDFILLSLVRT---KNVGHLRDVRRLIVAMSRAKLGLY------VFARVGLFKNCFELQPAFNILTKRPL-QLHLCPDEVYQTKRQANVNAPNPLIIN 1543
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Match: EMLSAG00000010966 (supercontig:LSalAtl2s:LSalAtl2s735:70316:72904:1 gene:EMLSAG00000010966 transcript:EMLSAT00000010966 description:"snap_masked-LSalAtl2s735-processed-gene-0.9") HSP 1 Score: 55.8398 bits (133), Expect = 4.208e-8 Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 834 FQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLA-KQLLWN 891
FQGRE DIII+S VRS + + IGFL+ R+ VALTRA+ ++GN L K +WN
Sbjct: 2 FQGRENDIIILSLVRS-EKETIGFLSISHRVTVALTRARRGLFLIGNINHLGEKSSIWN 59
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|27923995|sp|Q9VYS3.2|RENT1_DROME (RecName: Full=Regulator of nonsense transcripts 1 homolog) HSP 1 Score: 1362.44 bits (3525), Expect = 0.000e+0 Identity = 708/1209 (58.56%), Postives = 849/1209 (70.22%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALG-DTQGDEFGFQ-FTLPSQSQ---LGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVED----VLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSG---GRAM-------------SHHPNMAPPHGQLPPQRNNF------------------------NRGSQFIAHDNMNAI-QEDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERP-----------------------------NHYRQGAGGGNTQASMLSQDMER---TQNNTLTQGNN-------------LSLGMSLNDYGSEFSQGEMSQDVGRGLRSTTDGFLSQDSMYQGPRYNSQN 1116
S++++FLD +D +L G DTQ ++ ++ FT+PS SQ L ++ D ++ IT + +LQFE+EDD E G++ + LP +CKYCGIHDP++VV+C C+KWFCNGRG+TSGSHI+NHLVRAKH+EV LH +GPLGET+LECYSCG RNVFVLGFIPAKADSVV+LLCR PCA+QN+LKDMNW+QEQW+PLI DR FL+WLVK PS+ QLRARQISA Q+NKLE++WK+N+EA F DLE PG D EPA VLLRYEDGYQY+ FGPLV+LEA+YD+K KES TQENI+VRWD GLNKK IAYF L K DSD+KLM GDELRL Y+G+L PWS +GHVIK+PDN+GD+VG+E+KS+ P +CT NF +DF+WK TSFDRM AL KFA+D +SVS++IY +LLGH D VLFR P+ FSA +LP+LNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIV+QLVK GG VLVCAPSNTAVDQLT+K+ +T LKVVRVCAKSREAIDSPV+ LALHNQI+N+E SEL+KLQQLKDETGELSS+DEKR+R+L++ AE +LL ADV+ CTC+GAGD R+ R+KF SILIDESMQ+TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHPELS FPSNFFY+G+LQNGV EDRRL +DFPWPQ ++P FF + GQEEIAGSGTS+LNRTEA+NVEK+TT+F++AGI+ +QIGIITPYEGQRAYLVQ+MQYQGS H ++YQ IEIASVDAFQGREKDIII+SCVRSN+ QGIGFL DPRRLNVALTRAK+ IIVGNPKVLAKQ LWNHLL YKD +LVEG +NN+K S I F KPK+L N+ N G HFM+T I AKE + P + G GR M P P G P N+ + + + HD++ I E + +MP+PVGMF+NMS+IPPRF + ++ R GGN + + L + T LTQG++ LSL M+ + Q E+SQD G+ S DG LSQD + S N
Sbjct: 9 SSALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQTQNDQLEIAQRCSAGDSHPRLASITND--------LADLQFEEEDD---------------------------EPGSSYVKE-----LPPHACKYCGIHDPATVVMCNNCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISAAQINKLEELWKENIEATFQDLEKPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKLVNSMNIGAHFMSTIIADAKEVM-VPGSIYDRSGGYGQGRQMVGQSMNGGQYGGSGGGPYGNSPLGYGTPSSNSMVGFGLGNGGNGAAGGNNNFGGAGPSWAAAHLHHDSIGYISNEHGAAALGNMPVPVGMFMNMSNIPPRFYNQHQQAIMAVKQNRAIQQQTGNFSPGNSGPGVTGVGVGRSATPGGNKKTNKLGKSRVTGGGTGGAPLTQGSSVCNAAPYSQHPMPLSLQMTQPSGFALSQQPELSQDFGQ--ISQMDGLLSQDVAFNASGERSLN 1174
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|17380291|sp|Q92900.2|RENT1_HUMAN (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense mRNA reducing factor 1; Short=NORF1; AltName: Full=Up-frameshift suppressor 1 homolog; Short=hUpf1) HSP 1 Score: 1351.65 bits (3497), Expect = 0.000e+0 Identity = 699/1166 (59.95%), Postives = 819/1166 (70.24%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTA---------------DHTSQVEGITANGTT-----LLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDS-----------DLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDR-RLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQEDFSKLQTSMPIPVGMFVNMSHIPP-------------RFLPKTERPNHYRQ-------GAGGGNTQASMLSQDMERT--QNNTLTQGNNLSLGMSLNDYGSEFSQGEMSQD--VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ +L DTQG EF F FTLPSQ+Q G A D EGI NG S+ EL FE+ DEED +L P +C YCGIHDP+ VV C +KWFCNGRGNTSGSHIVNHLVRAK KEV LHKDGPLGETVLECY+CG RNVF+LGFIPAKADSVV+LLCR PCASQ++LKD+NW+ QW+PLI DR FLSWLVK+PS+ EQLRARQI+A Q+NKLE++WK+N A DLE PG D+EP VLLRYED YQYQNIFGPLVKLEADYDKK KESQTQ+NI VRWD GLNKKRIAYF L K DS D++LM GDE+ LRY GDLA W G+GHVIK+PDNYGDE+ IE++S+ G P E T NF +DFVWK+TSFDRMQ+ALK FAVD++SVS YIYHKLLGHEVEDV+ + QLP+ F+A LP+LN SQVYAVK LQRPLSLIQGPPGTGKTVTSATIV+ L +Q GPVLVCAPSN AVDQLT+K+ QTGLKVVR+CAKSREAIDSPV+ LALHNQI+N++ EL+KLQQLKDETGELSS+DEKR+R+L++ AE+ELL ADV+ CTC+GAGDPR+ +M+F SILIDES QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAK GLSQSLFERLVVLGIRP+RL+VQYRMHP LS+FPSN FY+G+LQNGV+ DR + DF WPQ DKP FFY + GQEEIA SGTSYLNRTEA+NVEK+TTK ++AG + DQIGIITPYEGQR+YLVQ+MQ+ GS H K+YQ +EIASVDAFQGREKD II+SCVR+N++QGIGFL DPRRLNVALTRA+Y IIVGNPK L+KQ LWNHLL +YK+ +LVEGP+NN++ S +QF KP++L N NPG FM T ++ A+EA+ P + S GR S + F HD + I S + +M IP+ + M +PP R PK + RQ G N S SQD+ LTQG +S+ SQ E+SQD +G +S D LSQDS YQG R
Sbjct: 10 SQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGGAGAGAAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEE---------------------DEEDTYYTKDL-------------PIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAI-IPGSVYDRSSQGRPSSMY----------------------FQTHDQIGMISAGPSHV-AAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQG-YISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGER 1116
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense mRNA reducing factor 1; Short=NORF1; AltName: Full=Up-frameshift suppressor 1 homolog; Short=mUpf1) HSP 1 Score: 1351.65 bits (3497), Expect = 0.000e+0 Identity = 698/1163 (60.02%), Postives = 820/1163 (70.51%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTA----------DHTSQVEGITANGTT-----LLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDS-----------DLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDR-RLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQEDFSKLQTSMPIPVGMFVNMSHIPP-------------RFLPKTERPNHYRQ-------GAGGGNTQASMLSQDMERT--QNNTLTQGNNLSLGMSLNDYGSE--FSQGEMSQD--VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ +L DTQG EF F FTLPSQ+Q G D EGI NG S+ EL FE+ DEED +L P +C YCGIHDP+ VV C +KWFCNGRGNTSGSHIVNHLVRAK KEV LHKDGPLGETVLECY+CG RNVF+LGFIPAKADSVV+LLCR PCASQ++LKD+NW+ QW+PLI DR FLSWLVK+PS+ EQLRARQI+A Q+NKLE++WK+N A DLE PG D+EP VLLRYED YQYQNIFGPLVKLEADYDKK KESQTQ+NI VRWD GLNKKRIA+F L K DS D++LM GDE+ LRY GDLA W G+GHVIK+PDNYGDE+ IE++S+ G P E T NF +DFVWK+TSFDRMQ+ALK FAVD++SVS YIYHKLLGHEVEDV+ + QLP+ F+A LP+LN SQVYAVK LQRPLSLIQGPPGTGKTVTSATIV+ L +Q GPVLVCAPSN AVDQLT+K+ QTGLKVVR+CAKSREAIDSPV+ LALHNQI+N++ EL+KLQQLKDETGELSS+DEKR+R+L++ AE+ELL ADV+ CTC+GAGDPR+ +M+F SILIDES QATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAK GLSQSLFERLVVLGIRP+RL+VQYRMHP LS+FPSN FY+G+LQNGV+ DR + DF WPQ DKP FFY + GQEEIA SGTSYLNRTEA+NVEK+TTK ++AG + DQIGIITPYEGQR+YLVQ+MQ+ GS H K+YQ +EIASVDAFQGREKD II+SCVR+N++QGIGFL DPRRLNVALTRA+Y IIVGNPK L+KQ LWNHLL +YK+ LVEGP+NN++ S +QF KP++L N NPG FM T ++ A+EA+ P + S GR + + F HD ++ I S + +M IP+ + M +PP R PKT+ RQ G S SQD+ LTQG + MS S+ SQ E+SQD +G +S D LSQDS YQG R
Sbjct: 10 SQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGAGAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEE---------------------DEEDTYYTKDL-------------PVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVNPGARFMTTAMYDAREAI-IPGSVYDRSSQGRPSNMY----------------------FQTHDQISMISAGPSHV-AAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGTPKTKTGRGGRQKNRFGLPGPSQTTLPNSQASQDVASQPFSQGALTQG---YVSMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGER 1111
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|18202669|sp|Q98TR3.1|RENT1_TAKRU (RecName: Full=Putative regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase RENT1) HSP 1 Score: 1273.07 bits (3293), Expect = 0.000e+0 Identity = 643/1025 (62.73%), Postives = 770/1025 (75.12%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHT-SQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCK-YCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDR-RLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQEDFSKLQTSMPIPVGMFVNMSHIPP 1023
S ++TFLD E+ +L DTQG E+ F FTLPSQ+Q G HT SQ++ Q DD GG ASQ E + EE++E +D LP +C+ YCGIHDP+ VV C +KWFCNGRGNTSGSHIVNHLVRAK KEV LHKDGPLGETVLECY+CG RNVF+LGFIPAKADSVV+LLCR PCASQ++LKD+NW+ QW+PLI DR FLSWLVK+PS+ EQLRARQI+A Q+NKLE++WKDN A DLE PG D+EP VLLRYED YQYQNIFGPLVKLEADYDKK KESQTQ+NI VRWD GLNKKRIAYF L K DSD++LM GDE+ LRY GDLA W G+GHVIK+PD+YGDE+ IE++++ G P E N+ +DFVWK+TSFDRMQ+ALK FAVD++SVS YIYHKLLGHEVEDV + QLP+ F+A+ LP+LN SQVYAVK LQRPLSLIQGPPGTGKTVTSATIV+ L +Q GPVLVCAPSN AVDQLT+K+D+TGLKVVR+CAKSREAI+SPV+ LALHNQI N++ EL+KLQQLKDETGELSS+DEKR+R+L++ AE+ELL ADV+ CTC+ AGDPR+ +M+F SILIDES QATEP+C+ PV LGAKQLIL G+ VMCKKAAK GLSQSLFERLVVLGIRP+RL+VQYRMHP LS+FPSN FY+G+LQNGV+ DR + DF WPQ +KP FFY + GQEEIA SGTSYLNRTEA+NVEK+TT+ ++AG + DQIGIITPYEGQR+YLVQ+MQ+ GS H K+YQ +EIASVDAFQGREKD II+SCVR+N++QGIGFL DPRRLNVALTRAKY IIVGNPK L+KQ LWN+LL +YK+ +LVEGP+NN++ S +QF KP++L N NP FM+T ++ A+EAL +GGR + + F HD + I S L ++ IP+ + M +PP
Sbjct: 10 SQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQG------------HTQSQLDN----------------QLNGPDDGLHNGGMDDSVAKASQLLAELNFEEDEE--DTYYTKD----LPVHACRSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKDNPCATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDSYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVIWCTCVRAGDPRLAKMQFRSILIDESTQATEPKCIGPVELGAKQLIL-GEITASWSCVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQ-VEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINP--RFMSTAMYDAREALIPGSAYDRSNTGGRPSNMY----------------------FQTHDQIGMIGAAASHL-AALNIPIPFNLVMPPMPP 973
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|88984684|sp|Q9FJR0.2|RENT1_ARATH (RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName: Full=ATP-dependent helicase UPF1) HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0 Identity = 572/997 (57.37%), Postives = 713/997 (71.51%), Query Frame = 0
Query: 128 SCKYCGIHDPSSVVLC--AICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKP-WSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGF--SELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNA----FNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQEDFSKLQTSMPIPVGMFVNMSHIPPR----FLPKTERPNHYRQGAGGGNTQASMLSQDMERTQNNTLTQGNNLSLGMSLNDYGSEFSQGEMSQDVGRGLRSTTDGF----LSQDSM 1106
+CKYCGI +P+ VV C A C+KWFCN RGNTSGSHIVNHLVRAKHKEV LH+D PLGET+LECY+CG RNVF+LGFI AK DSVV+LLCR PC + NALKDMNW+ QW PLI DR FL WLVKVPS+ EQLRARQISA Q+NK+E++WK N +A DLE PG DDEP V +YED YQYQN+F PL+KLEADYDK KESQ++EN+ VRWD GLNKKR+AYF K +++L+L+PGDELRLRY GD P W +GHVIK+ +EV +E+++N G+P + F +DFVWK+TSFDRMQ A+K FAVD++SVS YIYH+LLGHEVE + R+ LPR F LPELN SQV AVK LQ+P+SLIQGPPGTGKTVTSA IV+ + KQ G VLVCAPSN AVDQL +K+ TGLKVVR+CAKSREA+ SPV +L LH Q+++L+ SEL KLQQLKDE GELSSSDEK++++L++ E+E+ ADV+ CTC+GA D R+ +F +LIDES QATEPEC++P+VLG KQ++LVGDHCQLGPV+MCKKAA+ GL+QSLFERLV LGI+P+RL+VQYRMHP LS FPSN FY+GTLQNGV+ +R+ IDFPWP ++P FFY GQEEI+ SGTSYLNRTEA+NVEKL T F+++G+ QIG+ITPYEGQRAY+V +M GS ++Y+ IE+ASVD+FQGREKD II+SCVRSN++QGIGFL DPRRLNVALTRA+Y +I+GNPKVL+KQ LWN LL HYK++ LVEGP+NN+K S +QF KP+++ N + G + F + P G S+ P+ PP+G P ++ ++ S P P G IP R +P +P ++ GAG G + L + TQ+N T G SL L+ S+ S G G G ++ DGF +SQD +
Sbjct: 139 ACKYCGISNPACVVRCNVASCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRDPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSVGHVIKLTAQ--EEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRLFYGGGAGMIGNDNFGS----GNPNADRRGSRGRAGGSYLPS-GPPNGARP----------------GLHPAGYPIPRVPLS-PFPGGPPSQPYAIPTRGPVGAVPHAPQPGNHGFGAGRGTSVGGHLPH-QQATQHNVGTIGP--SLNFPLDSPNSQPSPGGPLSQPGYGSQAFRDGFSMGGISQDFL 1108
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR (RecName: Full=Regulator of nonsense transcripts 1 homolog) HSP 1 Score: 1055.43 bits (2728), Expect = 0.000e+0 Identity = 500/846 (59.10%), Postives = 640/846 (75.65%), Query Frame = 0
Query: 101 DEEDDE----------EEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLE-APGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDS-DLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNA---GIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDR-RLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNP 930
D++DDE + +L A V +++ LP +C YCGIH PSSVV C C KWFC+ +G+ SHIVNHLVRA+HKEV LH + LG+TVLECY+CGT+NVF+LGFIPAK+D+VV+LLCR PC + + KDM+W+ +W+PLI DR+FL+WLV P+D EQLRAR ++ + KLE+MWK+ A DLE G DD+P VLL+Y+D Y YQNIFGPLVK+E+DYDKK KE+Q+++ + VRW GLN K +A F L K +S D+KL GDE+RL+Y G+L PW G+G+VIKIP+N DEV +E++ +A +PTECT NF D+VWKATS+DRMQ A+K FAVD+ SVS YI+HKLLGHEV+ + +P+ F LPELN SQ+ A+K L PLSLIQGPPGTGKTVTSATI++ L K VLVCAPSN AVDQL +++ +TGLKVVR+ AKSRE ++S V+ LALH Q++ EL L +LK ETGELSS DEKRF+ L +QAE+E+L ADVV CTC+GAGDPR+ +MKF ++LIDES Q+ EPECM+P+VLG KQ++LVGDH QLGPV+M KKAAK GL+QSLFERLV L P+RL+VQYRMHP LS FPSN FY+G+LQNGV+ +R R +DFPWP + P F+++ G EEI+ SGTSYLNRTEA+NVEK+ T+F +AG++ IG+ITPYEGQR+Y+V MQ G+ + Y+ +E+ASVDAFQGREKD I++SCVRSN+ QGIGFL+DPRRLNVALTRAKY +I+GNPKVL K LW+HLL H+KD LVEGP+ N++PS +QF +P++ A+ P
Sbjct: 69 DDDDDESLASVPVDGMKSLKLDAPVEEKE----LPPHACAYCGIHSPSSVVKCLTCNKWFCSAKGSAFSSHIVNHLVRARHKEVQLHPESSLGDTVLECYNCGTKNVFILGFIPAKSDTVVVLLCRQPCGASTSTKDMSWDISRWQPLIEDRAFLNWLVTPPTDAEQLRARHLTPPMIAKLEEMWKEAPNATVADLEKTAGVDDDPHPVLLKYDDPYHYQNIFGPLVKMESDYDKKLKEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAVGDEMRLKYKGELRPPWEGVGYVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVQVAPTKITMPKKFHVPGLPELNASQIAAIKQVLSNPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNTTNKELDGLVKLKTETGELSSQDEKRFKQLTRQAEREILQNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCLVEGPLTNLQPSLLQFGRPRQ---AYRP 907
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|19924241|sp|Q09820.2|RENT1_SCHPO (RecName: Full=ATP-dependent helicase upf1; AltName: Full=Nonsense-mediated mRNA decay protein upf1; AltName: Full=Regulator of nonsense transcripts 1 homolog; AltName: Full=Up-frameshift suppressor 1) HSP 1 Score: 985.326 bits (2546), Expect = 0.000e+0 Identity = 460/803 (57.29%), Postives = 598/803 (74.47%), Query Frame = 0
Query: 129 CKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDS-DLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLV------KQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDR-RLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKR 923
C YC I +P+S++ C C KWFCN RG + SHI++HLVRA+HK+V LH L +TVLECY+CGTRNVF+LGFIPAKA +VV+LLCR PCA + KDMNW+ QW+P+I DR FL WL+ PS+ EQ A I++ QM +LE++W+ + A+ DL+ P DD V LRY+D + YQ + PL++ EADYDK+ KESQTQ+++ VRWDQ +NK+ A+F L K +S +++L GDE++L Y G+L PWS G+VIKIP+N DEVG+E+K + +P ECT NF +D+VWK+TSFDRMQ AL+ FA D S +SS++YHKLLGH++ + +LP S NLP+LN SQ AV+ L +PLSLIQGPPGTGKTVTSA++V+ L ++ PVLVCAPSN AVDQL +K+ +TGL+VVRV AKSRE I+S V+ L+LH QIKN + EL++L +L+ E ELS DEK+ R L AEKELL A V+ CTC+GAGD R+ + KF S+LIDE+ QA+EPECM+P+VLGAKQ++LVGDH QLGPVVM KK A LSQSLFERL++LG P RL VQYRMHP LS FPSN FY+GTLQNGV+ +R +DFPW Q D P FYA+ GQEE++ SGTS+LNRTEAS EK+ T F+R+ + +QIGI+TPY+GQR+Y+VQ+MQ GS +Y+++E+ASVDAFQGREKD II+SCVRS+++QGIGF+ DPRRLNVALTRAKY I++GNPKVLAK LW H + H K+ G LVEG +N+++ + P++
Sbjct: 44 CAYCHIKNPNSILKCLHCNKWFCNVRGKSGASHIISHLVRARHKQVALHSHSSLSDTVLECYNCGTRNVFLLGFIPAKAKTVVVLLCRQPCARASIAKDMNWDLTQWQPIISDRQFLPWLITPPSEEEQKLAIPITSQQMVRLEELWRKDPNANLEDLDKPIEDDSLPSVELRYKDAHAYQAVLSPLIQAEADYDKRLKESQTQKDVVVRWDQAINKRYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRAPWSSTGYVIKIPNNVSDEVGLELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRLSSFLYHKLLGHDIPPSFLKPKLPSDLSVPNLPKLNASQSEAVRAVLSKPLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYKFNPELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQKFSLTLTPPQK 846
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|17380277|sp|O76512.1|RENT1_CAEEL (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=ATP-dependent helicase smg-2; AltName: Full=Nonsense mRNA reducing factor 1; AltName: Full=Up-frameshift suppressor 1 homolog) HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0 Identity = 469/921 (50.92%), Postives = 628/921 (68.19%), Query Frame = 0
Query: 5 SMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIK-NDSDLKLMPGDELRLRYLGDL-AKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPT-ECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLA-IDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPK 920
++TF+DPED +++G+TQ +F + QF++P+QS L G + T T++L F D +D DE D E+ ++ + LP +C+YCGI DP V C +C+KWFCN TSG HIV+H+VR++HKE HKD P G+T LECY CG++NVF LGFIP K D VV+++CR PCAS D NW E W+ +I ++ LSW+V VPS+ + RAR+I+ATQ ++E++W+D+ EA DL PG D EP V LRY D + Y +F PLV +EA+YD++ KES +Q VRW+QGL + +A+F+L + D +KL GDELRL++ + W+ +G V KIPDN+GDEVGIE++ E F +D VW AT+F+R AL D ++S Y+Y KLLGH E+++ + LPR S LPELN SQ+ AVK L RPLSLIQGPPGTGKTV SATIV+ LV++ G VLVC+PSN AVD L +K+ +TGLKVVR+CA+SRE ++ V +L L +Q+K + G +EL+KL QLKDE GEL D+ R+ L++ E ELL+ ADV+ CTC A D R+ +++ ++LIDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA GLSQSLFERLV+LGIRP RL+VQYRMHP LS FPSN FYDG+LQNGV+ DR + +D+ WP+ +KP FF+ +G EE++ SGTS+LNRTEA+NVEKL +K I+AG++ QIG+IT YEGQR+++V +M QG+ + K+Y+++EIASVDAFQGREKD II++CVRSND GIGFL+DPRRLNVA+TRAKY ++VGN KVLA+ LW+ L+ HYK +L EGPIN +KP + PK
Sbjct: 15 TLTFVDPEDDGVSIGNTQDSQFAYEQFSVPTQSSQATDLLPGGTDGT---------------------TNDLPFHDVED------------------DESDSEK------SLTEEQHEQKLPEHACRYCGISDPLCVAKCTVCRKWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCASIAFQNDDNWSPEDWKSVIAEKQLLSWIVNVPSEEQVARARKITATQAVRMEELWRDHPEATVDDLNKPGLDREPDHVQLRYVDAHHYSKVFRPLVAIEAEYDRRVKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKIGSVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQMQAVKQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTVPYLTLQHQLKVMGG-AELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEGPINALKPLNLALPK 889
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|400350|sp|P30771.1|NAM7_YEAST (RecName: Full=ATP-dependent helicase NAM7; AltName: Full=Nonsense-mediated mRNA decay protein 1; AltName: Full=Nuclear accommodation of mitochondria 7 protein; AltName: Full=Up-frameshift suppressor 1) HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0 Identity = 451/841 (53.63%), Postives = 599/841 (71.22%), Query Frame = 0
Query: 103 EDDEEEDELGAAVAQRDDSG----TLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDS-DLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMK-SNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQI-KNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLA-IDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQF--PKPKR----LNNAFN 929
EDD+ +++L AQ ++G + SC YCGI V+ C C+KWFCN + TS SHIVNHLV + H V LH D LG+TVLECY+CG +NVF+LGF+ AK+++VV+LLCR PCA K+ NW+ +QW+PLI DR LSW+ + P++ E+L+AR I+ +Q++KLE W+ N +A D++AP + +LLRY+D Y+YQ +GPL+KLEADYDK+ KESQ E+I V W LN + +A F L +S +LK+ GDE+ L Y G W G G+++++P+++ D +E+K S PT T F +F+WK TS+DRMQ+ALKKFA+D S+S Y+Y+K+LGH+V D+ F LP+ FS N +LN SQ AV H LQRPLSLIQGPPGTGKTVTSATIV+ L K +LVCAPSN AVD L KL GLKVVR+ AKSRE ++S V++LALHN + + +G EL+ L +LKDE GELS+SD KRF L ++ E E+L+ ADVV CTC+GAGD R + KF ++LIDES QA+EPEC++P+V GAKQ+ILVGDH QLGPV++ +KAA GL QSLFERL+ LG P+RLEVQYRM+P LS FPSN FY+G+LQNGV+ E R + FPWP P F+A+ G+EEI+ +GTS+LNR EA N E++ TK R G++ +QIG+ITPYEGQRAY++Q+MQ GS +Y +E+ASVDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKY +I+GNP+ LA+ LWNHLL H+++ G LVEG ++N++ +Q P+P++ +N FN
Sbjct: 33 EDDDVDNQLFEE-AQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCAQT---KNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEAIPPLLLRYQDAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKG--ELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKR-LDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQPRKTERPMNAQFN 866
BLAST of regulator of nonsense transcripts vs. SwissProt
Match: gi|74852418|sp|Q54I89.1|RENT1_DICDI (RecName: Full=Regulator of nonsense transcripts 1; AltName: Full=Up-frameshift suppressor 1 homolog) HSP 1 Score: 877.47 bits (2266), Expect = 0.000e+0 Identity = 436/865 (50.40%), Postives = 586/865 (67.75%), Query Frame = 0
Query: 72 THELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCA--ICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIH--DRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDE-PAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAK--PWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGH-EVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGG--PVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLE--GFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRL 924
+H + F + ++ + G + P +SQ EE EE + LP +C YC H+ S+VV C C KWFCNG+G T SHI+ HLV++KHKEV LH + G+T LEC++CG +N+F+LGFI A+ +SVV+LLCR PCAS + K++NW+ W+PLI+ +++F SWLVK PS + R+RQI+ Q+ +LE+ WK + EA LD+EAP DDE PA L Y+D Y+Y+ I PL++LEA ++K+ +ES +Q I + W QG+NK+ A F ++D + K++PGDEL+L+++ W G VI I D + + +E KS + ++ ++ VW++TS +R+ +A+K FA+ + ++SSY+YH LLGH ++ QLP +F NLP LN SQ+ AV L PLSLIQGPPGTGKTV S+ I+ LVK G VLVC PSN A+DQLT KL + GLKVVR+ +K RE + SPV HL LH Q+ L+ G EL KL++LK+ G LS+ DEKR+ LR+ E +L ADV+ TC+GAGDPR+ + +FP ILIDES QA+EPEC++P+++GAKQ+ILVGDH QLGPV++CKK GLSQSLFERL+ LG P RL +QYRMHP L+ FPSN Y+G L + +S DR FPWPQ P FF+ TG EEI+ SGTS++N TEAS EK+ TKF+ G QIGIITPYEGQRAY+ MQ G + ++Y+SIE+ASVD+FQGREKD II+SCVRSNDYQGIGFL DPRRLNVALTRA++ II+GN KVL+K LWN L+ H+K+ +LVEG + N+K SP+ KPK+L
Sbjct: 141 SHNMDFLNSQNINSQIGLMDPHLHSSQLNFEEPQEEIE--------------LPAHACAYCATHELSTVVKCMHPSCGKWFCNGKGKTKSSHIITHLVKSKHKEVALHPESSFGDTTLECFNCGCKNIFLLGFITARTESVVVLLCRDPCASGPS-KEVNWDMSSWQPLINGGEKAFCSWLVKTPSQVDSERSRQITIQQILRLEEFWKMDPEATLLDIEAPRSDDEKPASTQLAYKDAYEYREIISPLIELEAKHEKELRESLSQSGISIEWSQGINKRYTATFPFSRSDLEFKVVPGDELKLQFISSTGGVIEWEDTGRVIHIDDE--NLLSLETKSRCSFDSGPKGSYRMEMVWRSTSSERILSAMKSFAIKEQALSSYLYHALLGHPDIPPAPLDIQLPTNFHLKNLPRLNESQISAVNKVLTAPLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPVEHLTLHKQVYKLDQMGDGELGKLRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGAGDPRLSQFRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGSLANLKQSPVILQKPKKL 988
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|1134659868|ref|XP_019888567.1| (PREDICTED: regulator of nonsense transcripts 1 [Ooceraea biroi] >gi|607356314|gb|EZA50843.1| Regulator of nonsense transcripts [Ooceraea biroi]) HSP 1 Score: 1503.8 bits (3892), Expect = 0.000e+0 Identity = 759/1139 (66.64%), Postives = 882/1139 (77.44%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEAL--ATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNN----FNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGGNTQASMLSQDMERTQNNT---------LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ + A T + I NGT S DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VVLC +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q +LKDMNW+QEQW+PLI DRSFL+WLVK+PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDD+SVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY II+GNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL + Y G A SH+P QRN F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ GA + + +T+ NT LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQAS------QHDATQTQSSQPIQVNGTNGSSAL----------DLKISG--------AAQSLAEL--QFEEEEEEAYYNRD----LPDHACKYCGIHEASCVVLCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQTSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIIGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIPGSVYDRSGAQVNG-AQSHNPYY---------QRNVPLDIFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGAAAAKGKIGSRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1100
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|861645055|gb|KMQ94949.1| (regulator of nonsense transcripts 1-like isoform 1 protein [Lasius niger]) HSP 1 Score: 1502.65 bits (3889), Expect = 0.000e+0 Identity = 753/1136 (66.29%), Postives = 886/1136 (77.99%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGG---NTQASMLSQDMERTQNNT---------LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPSQSQ + A T + + NGT S DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPA+ADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFLSWLVK+PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDD+SVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQG+ H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + + P + F+R HD ++ I E ++P+P+GMF+NM+H+PPRF + ++ RQ GAG N + + +T+ NT LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSQSQTQAS------QHDATQTQSSQPVQVNGTNGSSSL----------DLKISG--------ATQSLAEL--QFEEEEEEAYYNRD----LPEHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPARADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKIPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPALDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGALHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNASNPGSHFMSTSMYDAREALIP---GSVYDRSGTQVNGMQNHNPYYQRNVP-LDIFSR-----THDTISYISPERAQAAMNNIPVPLGMFMNMAHVPPRFYNQHQQALQARQNQKNRRGAGAASMRNKSGLRMGKLSSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1103
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|751222659|ref|XP_011164575.1| (PREDICTED: regulator of nonsense transcripts 1 [Solenopsis invicta]) HSP 1 Score: 1501.49 bits (3886), Expect = 0.000e+0 Identity = 755/1134 (66.58%), Postives = 879/1134 (77.51%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ-------GAGGGNTQASMLSQDMERTQNNT---------LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ + A T + I NGT S DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFLSWLVK PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDDSSVS YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + QRN+ HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ A ++ + +T+ NT LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQAS------QHDATQTQSSQPIQVNGTNGSSSL----------DLKISG--------AAQSLAEL--QFEEEEEEAYYNRD----LPDHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDSSVSGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGTQVNGTQNHNPYY-----QRNHVPLDIFSRTHDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGAAASARNKSGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVG-DFQSQMDGLLSQDSTYQGDR 1102
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|769853245|ref|XP_011638111.1| (PREDICTED: regulator of nonsense transcripts 1 [Pogonomyrmex barbatus]) HSP 1 Score: 1499.95 bits (3882), Expect = 0.000e+0 Identity = 760/1135 (66.96%), Postives = 885/1135 (77.97%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITA-NGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGGNTQAS-----MLSQDMERTQNNT-----LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ S + T +SQ I NG+T L DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFLSWLVK PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDD+SVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + + P + F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ GA S LSQ + TQ + LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQA----SQHDATQTQSSQPVQINGTNGSTSL-------------DLKITG--------AAQSLAEL--QFEEEEEEAYYNRD----LPEHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNCGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQSGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGAQVNGTQNHNPYYQRNVP-LDIFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGAAASARNKSGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1101
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|951579436|ref|XP_014487377.1| (PREDICTED: regulator of nonsense transcripts 1 [Dinoponera quadriceps]) HSP 1 Score: 1499.57 bits (3881), Expect = 0.000e+0 Identity = 760/1141 (66.61%), Postives = 886/1141 (77.65%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGR---AMSHHPNMAPPHGQLPPQRNN----FNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGGNTQAS-----MLSQDMERTQNNT-----LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ + A T + + NGT+ S DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECY+C TRNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFLSWLVK+PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDDSSVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRA+LVQ MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL P + G+ A +H+P QRN F+R HD ++ I E ++P+PVGMF+NM+H+PPRF + ++ RQ GA G S LSQ + TQ + LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQAS------QHDATQTQSSQPVQVNGTSGSSSL----------DLKITG--------AAQSLAEL--QFEEEEEEAYYNRD----LPEHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYNCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKIPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECNSNFVVDFIWKSTSFDRMQSALRKFAVDDSSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPVQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQALWNHLLNFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREAL-IPGSVYDRSGSGQVNGAQNHNPYY---------QRNVPLDIFSR-----THDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQHQQAVQARQNQRNRRGAAGTARNKSGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1102
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|746834853|ref|XP_011068096.1| (PREDICTED: regulator of nonsense transcripts 1 homolog [Acromyrmex echinatior]) HSP 1 Score: 1499.57 bits (3881), Expect = 0.000e+0 Identity = 757/1135 (66.70%), Postives = 884/1135 (77.89%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQG--------AGGGNTQASMLSQDMERTQNNT---------LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ S + T +SQ I NGT S DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q +LKDMNW+QEQW+PLI DRSFLSWLVK PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDD+SVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + + P + F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ A N + + + +T+ NT LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQA----SQHDVTQTQSSQ--SIQVNGTNGSSSL----------DLKISG--------AAQSLAEL--QFEEEEEEAYYNRD----LPDHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQTSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGTQVNGTQNHNPYYQRNVP-LDIFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGVTASARNKSGPRMGK-LSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1101
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|1070599156|ref|XP_018396886.1| (PREDICTED: regulator of nonsense transcripts 1 [Cyphomyrmex costatus] >gi|1009378311|gb|KYN01538.1| Regulator of nonsense transcripts 1 [Cyphomyrmex costatus]) HSP 1 Score: 1498.8 bits (3879), Expect = 0.000e+0 Identity = 756/1136 (66.55%), Postives = 886/1136 (77.99%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQ-VEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQG--------AGGGNTQASMLSQDMERTQNNT---------LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ S + T +SQ V+ NG++ L DL++ G A+Q E + E+E A RD LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q +LKDMNW+QEQW+PLI DRSFLSWLVK PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDD+SVS+YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + + P + F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ A N + + + +T+ NT LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQA----SQHDVTQSQSSQPVQVNGTNGSSSL-------------DLKISG--------AAQSLAEL--QFEEEEEEAYYNRD----LPDHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQTSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGAQVNGTQNHNPYYQRNVP-LDIFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGVTASARNKSGPRMGK-LSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVGE-FQSQMDGLLSQDSTYQGDR 1101
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|815809613|ref|XP_012225682.1| (PREDICTED: regulator of nonsense transcripts 1 homolog [Linepithema humile]) HSP 1 Score: 1498.8 bits (3879), Expect = 0.000e+0 Identity = 746/1132 (65.90%), Postives = 875/1132 (77.30%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGGNTQAS-----MLSQDMERTQNNT-----LTQGNNLSL---GMSLNDYGSEFSQGEMSQD-VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ + A T + + NGT S ++ + EL+ + + ++D LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFL WLVK+PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC +FV+DF+WK+TSFDRMQ+AL+KFAVDDSSVS YIYH+LLGHEVE+VLFR +P+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G M+ N P + + P + F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ GA S LSQ + TQ + LTQG + G SL+ G SQ E+SQD +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQAS------QHDATQTQSSQPVQVNGTNNTSSLELKISGATQSLAELQFEEEEEEAYYNRD------------------------LPEHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLVWLVKIPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFLLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECVSHFVVDFIWKSTSFDRMQSALRKFAVDDSSVSGYIYHRLLGHEVEEVLFRCHIPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGAQMNGTQNHNPYYQRNVP-LDMFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGATTSTRNKSGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAIEFQSQMDGLLSQDSTYQGDR 1100
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|1228009358|ref|XP_021936594.1| (regulator of nonsense transcripts 1 [Zootermopsis nevadensis] >gi|646699937|gb|KDR10316.1| Regulator of nonsense transcripts 1 [Zootermopsis nevadensis]) HSP 1 Score: 1498.8 bits (3879), Expect = 0.000e+0 Identity = 752/1139 (66.02%), Postives = 877/1139 (77.00%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEG-ITANGT----TLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRRLA-IDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEAL--ATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQEDFSKLQTS-MPIPVGMFVNMSHIPPRFLPKTERPNHYRQGAGGGNTQASMLSQDMERTQNNTLTQGNN----------LSLGMSLNDYGSEF-------SQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPSQSQ +G T SQV G + NG T ++A ELQFE+EDD A +D LP +CKYCGIHDPS VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LHKDGPLGETVLECYSCG RNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DR FL+WLVK+PS+ EQLRARQISA Q+NKLE++WKDN +A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDKK KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDN+G+EVGIE+K+N+G PT+C +FV+DF+WK+TSFDRMQ AL+KFAVDDSSVS YIYH+LLGH+VE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+ LVKQ GG VLVCAPSN AVDQLT+K+ +TGLKVVR+CAKSREAI+SPV+ LALHNQI+N++ +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQ+TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHPELS FPSNFFY+G+LQNGV E+R+L I+FPWPQ DKP FFY + GQEEIAGSGTSYLNRTEASNVEKL T+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKD+II+SCVRSN++QGIGFL DPRRLNVALTR+KY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPGTHFM+T+++ A+EAL + Y H +G A SH P+G + + R HD ++ I + ++ S +P+PVGMF+NM+H+PPRF + ++ RQ + + N+LT G L+ GMS + F SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSQSQTQASQLDAGQIQTTQ--SQVNGEVGENGIDTDLTATTKALGELQFEEEDD------------------------------EAYYNKD----LPEYACKYCGIHDPSCVVMCNVCKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIADRCFLTWLVKIPSEQEQLRARQISAMQINKLEELWKDNADATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKKLKESQTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYLGELHKPWSGVGHVIKIPDNFGEEVGIELKNNSGAPTDCISHFVVDFIWKSTSFDRMQLALRKFAVDDSSVSGYIYHRLLGHDVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIVYHLVKQSGGSVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIESPVSFLALHNQIRNMDCNTELQKLQQLKDETGELSSVDEKRYRMLKKAAEKELLEAADVICCTCVGAGDPRLQRLKFHSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCAEERKLTKIEFPWPQQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKLATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHAKLYQEIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRSKYGIIIVGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKESLIQFSKPKKLVNAANPGTHFMSTSVYDAREALVPGSVYDRTGHMNGTSAPSHF--FPRPNGG-GVAVDMYTR-----THDPISYISPERAQAALSNLPVPVGMFMNMAHVPPRFYNQHQQAVQARQNQRNRAATRNKVKNSRNNVAKNSLTSGQGSQDATQPYSPLTQGMSQSMSQPGFSLSQPGLSQPELSQDSYMVGE-YQSQMDGLLSQDSTYQGDR 1103
BLAST of regulator of nonsense transcripts vs. nr
Match: gi|826442278|ref|XP_012530561.1| (PREDICTED: regulator of nonsense transcripts 1 homolog [Monomorium pharaonis]) HSP 1 Score: 1498.41 bits (3878), Expect = 0.000e+0 Identity = 751/1134 (66.23%), Postives = 877/1134 (77.34%), Query Frame = 0
Query: 3 SASMTFLDPEDQDLALGDTQGDEFGF-QFTLPSQSQLGGGLALSGLEFTADHTSQVEGITANGTTLLSEATHELQFEDEDDLELRGGRIKPKGLASQDPDEEDDEEEDELGAAVAQRDDSGTLPTTSCKYCGIHDPSSVVLCAICQKWFCNGRGNTSGSHIVNHLVRAKHKEVILHKDGPLGETVLECYSCGTRNVFVLGFIPAKADSVVILLCRHPCASQNALKDMNWEQEQWRPLIHDRSFLSWLVKVPSDPEQLRARQISATQMNKLEDMWKDNMEADFLDLEAPGRDDEPAQVLLRYEDGYQYQNIFGPLVKLEADYDKKWKESQTQENIDVRWDQGLNKKRIAYFNLIKNDSDLKLMPGDELRLRYLGDLAKPWSGLGHVIKIPDNYGDEVGIEMKSNAGIPTECTKNFVIDFVWKATSFDRMQNALKKFAVDDSSVSSYIYHKLLGHEVEDVLFRSQLPRHFSADNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVFQLVKQKGGPVLVCAPSNTAVDQLTQKLDQTGLKVVRVCAKSREAIDSPVAHLALHNQIKNLEGFSELRKLQQLKDETGELSSSDEKRFRSLRKQAEKELLSVADVVSCTCIGAGDPRVIRMKFPSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKGGLSQSLFERLVVLGIRPLRLEVQYRMHPELSSFPSNFFYDGTLQNGVSGEDRR-LAIDFPWPQADKPTFFYASTGQEEIAGSGTSYLNRTEASNVEKLTTKFIRAGIRADQIGIITPYEGQRAYLVQFMQYQGSHHPKIYQSIEIASVDAFQGREKDIIIISCVRSNDYQGIGFLADPRRLNVALTRAKYAAIIVGNPKVLAKQLLWNHLLQHYKDNGILVEGPINNMKPSPIQFPKPKRLNNAFNPGTHFMNTTIFSAKEALATPYHAHLHPSGGRAMSHHPNMAPPHGQLPPQRNNFNRGSQFIAHDNMNAIQ-EDFSKLQTSMPIPVGMFVNMSHIPPRFLPKTERPNHYRQ------GAGGGNTQAS-----MLSQDMERTQNNT-----LTQGNNLSL---GMSLNDYGSEFSQGEMSQD---VGRGLRSTTDGFLSQDSMYQGPR 1111
S ++TFLD E+ DL DTQG EF F FTLPS SQ + A T + I NGT S ++ + EL+ + + ++D LP +CKYCGIH+ S VV+C +C+KWFCNGRGNTSGSHI+NHLVRAKHKEV LH+DGPLGETVLECYSC TRNVFVLGFIPAKADSVV+LLCR PCA+Q++LKDMNW+QEQW+PLI DRSFLSWLVK PS+ EQLRARQISA Q+NKLE++W+DN++A F DLE PG D+EP QVLLRYEDGYQYQNIFGPLVKLEADYDK+ KESQTQENI+VRWD GLNKK IAYF L K D D+KLM GDELRLRYLG+L KPWSG+GHVIKIPDNYG+EVGIE+K+N+G PTEC NFV+DF+WK+TSFDRMQ+AL+KFAVDDSSVS YIYH+LLGHEVE+VLFR LP+HFSA NLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV+QLVKQ GGPVLVCAPSNTAVDQLT+K+ ++ LKVVR+CAKSREAIDSPV+ LALHNQIKN+E +EL+KLQQLKDETGELSS DEKR+R L+K AEKELL ADV+ CTC+GAGDPR+ R+KF SILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA+ GLSQSLFERLVVLGIRP RLEVQYRMHP+LS FPSNFFY+G+LQNGV ++R+ L IDFPWP DKP FFY + GQEEIAGSGTSYLNRTEASNVEK+TT+F+R G++ +QIG+ITPYEGQRAYLVQ+MQYQGS H K+YQ IE+ASVDAFQGREKDIII+SCVRSN++QGIGFL DPRRLNVALTRAKY IIVGNPKVL+KQ LWNHLL YK+ +LVEGP+NN+K S IQF KPK+L NA NPG+HFM+T+++ A+EAL ++ G ++ N P + + P + F+R HD ++ I E +MP+PVGMF+NM+H+PPRF + ++ RQ GA S LSQ + TQ + LTQG + G SL+ G SQ E+SQD VG +S DG LSQDS YQG R
Sbjct: 10 SQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQAS------QHDATQTQSSQPIQVNGTNGSSSLELKISGAAQSLAELQFEEEEEEAYYNRD------------------------LPDHACKYCGIHEASCVVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDSSVSGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAANPGSHFMSTSMYDAREALIP---GSVYDRSGAQVNGTQNHNPYYQRNVP-LDIFSR-----THDTISYISPERAQAAMNNMPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGATASARNKSGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPG--LSQAELSQDSFAVG-DFQSQMDGLLSQDSTYQGDR 1101 The following BLAST results are available for this feature:
BLAST of regulator of nonsense transcripts vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 10
BLAST of regulator of nonsense transcripts vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of regulator of nonsense transcripts vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold33_size549341:52108..57754+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold33_size549341-snap-gene-0.19 ID=maker-scaffold33_size549341-snap-gene-0.19|Name=regulator of nonsense transcripts|organism=Tigriopus kingsejongensis|type=gene|length=5647bp|location=Sequence derived from alignment at scaffold33_size549341:52108..57754+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'regulator of nonsense transcripts' has the following synonyms
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