truncated nicotinic acetylcholine receptor a2 subunit, maker-scaffold33_size549341-snap-gene-0.20 (gene) Tigriopus kingsejongensis

Overview


Name	truncated nicotinic acetylcholine receptor a2 subunit
Unique Name	maker-scaffold33_size549341-snap-gene-0.20
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26")

HSP 1 Score: 158.688 bits (400), Expect = 6.855e-49
Identity = 72/106 (67.92%), Postives = 91/106 (85.85%), Query Frame = 0

Query:    7 VLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            V++VF      GNP AKRLYDDLLSNYNRLIRPVSN+TEK+TV+LGL+LSQL++++LK+Q++TTNVW+E +W D K  W PEEYGGV  +YVPS+HIWLPDI+L+N
Sbjct:   12 VIVVFTEHARGGNPHAKRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFN 117

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12")

HSP 1 Score: 146.362 bits (368), Expect = 1.973e-44
Identity = 64/95 (67.37%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   18 GNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            GNPDAKRLYDDLLSNYN+L+RPV N T+ + V++ L+LSQL+++NLK+QI+TTN+W+E  W D K KWDPEEYGGV +++VPS+HIW PDI+LYN
Sbjct:   49 GNPDAKRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYN 143

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16")

HSP 1 Score: 147.132 bits (370), Expect = 2.817e-43
Identity = 65/107 (60.75%), Postives = 89/107 (83.18%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            + LI  ++  + GNPDAKRLYDDLLSNYN+L+RPV N ++ VTVKL L+LSQL+++NL++QI+TTN+W+E  W D K +W+P+EYGGV  ++VPS+HIW PDI+LYN
Sbjct:    7 ISLIFVMITGSCGNPDAKRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYN 113

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5")

HSP 1 Score: 143.665 bits (361), Expect = 4.234e-42
Identity = 63/111 (56.76%), Postives = 87/111 (78.38%), Query Frame = 0

Query:    7 VLIVFLVG-----RAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            + ++F +G         NPDAKRLYDDLLSNY+RLIRPV N ++++TVK+GL+LSQ++ +++K QI+ TNVW+  EW D K KW PE+YGGV  ++VPS++IWLPDI+LYN
Sbjct:    8 LCVLFFIGTVYFSSVCANPDAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYN 118

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5")

HSP 1 Score: 108.612 bits (270), Expect = 1.097e-30
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0

Query:    7 VLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEE 89
            + ++       GNPDAKRLYDDLLSNYN+L+ PV N +E VTV+L L+LSQL+++NLK+QI+TTN+W+E  W D K +WDP E
Sbjct:   14 IFVLICTSVRAGNPDAKRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE 96

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30")

HSP 1 Score: 100.908 bits (250), Expect = 2.047e-26
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    6 VVLIVFLV---GRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            ++L+ FL+       G+ + +RL  DL   YN+LIRPV N T+KV V  GL   QL+ +N K+QI+ +NVW+   W D + +WD  +YGG++ + +P + +W PDI+L+N
Sbjct:    8 IILLTFLLRLFSPGHGSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFN 117

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000001191 (supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 gene:EMLSAG00000001191 transcript:EMLSAT00000001191 description:"augustus_masked-LSalAtl2s119-processed-gene-0.1")

HSP 1 Score: 86.2705 bits (212), Expect = 1.848e-23
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query:   14 GRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYNK 113
            G A G     RL   LLSNY   + PV N +  + V LG+ L  +++++ K+QI+TTN W+   W+D    W+  ++GG+  I +P + +W PDIILYNK
Sbjct:    6 GPALGGEYEYRLTKYLLSNYEPSVLPVENSSTPLDVSLGVSLHHIIDVDEKNQIITTNCWITQTWRDTHLTWNASDFGGIRTIRLPFDRVWRPDIILYNK 105

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0")

HSP 1 Score: 82.0333 bits (201), Expect = 4.278e-20
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0

Query:   68 LTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            +TT+   +HEWKD KF WDP EYGGVTEIYVPSEHIWLPDIILYN
Sbjct:    1 MTTDGLEDHEWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYN 45

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18")

HSP 1 Score: 73.9442 bits (180), Expect = 3.416e-17
Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 0

Query:   18 GNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGV------TE--------IYVPSEHIWLPDIILYNK 113
            G    K++ + + +NYN L RPV +  E V + +G+ L +++ L+ K+QILT N+W+   WKD+   W+  EY  +      TE        + +P+EH+W PDI+LYN 
Sbjct:   19 GGQTEKKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNS 128

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1")

HSP 1 Score: 70.0922 bits (170), Expect = 1.137e-15
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0

Query:   24 RLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            RL + LL  Y++ + PVSNH++ V V +G+ L  L ++N     +  + WM   W D    WDP +Y  +T+I+   + IW PDI+ YN
Sbjct:  265 RLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHL-DINELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYN 352

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor)

HSP 1 Score: 182.57 bits (462), Expect = 6.001e-55
Identity = 83/96 (86.46%), Postives = 92/96 (95.83%), Query Frame = 0

Query:   17 QGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            Q NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:   40 QANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|113050|sp|P23414.1|ACH1_SCHGR (RecName: Full=Acetylcholine receptor subunit alpha-L1; Flags: Precursor)

HSP 1 Score: 178.333 bits (451), Expect = 1.902e-53
Identity = 81/94 (86.17%), Postives = 91/94 (96.81%), Query Frame = 0

Query:   19 NPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KF+WDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:   24 NPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPAEYGGVTELYVPSEHIWLPDIVLYN 117

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|30581035|sp|P09478.2|ACH1_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 1; AltName: Full=Nicotinic acetylcholine receptor alpha 1; Flags: Precursor)

HSP 1 Score: 158.688 bits (400), Expect = 4.863e-46
Identity = 69/95 (72.63%), Postives = 87/95 (91.58%), Query Frame = 0

Query:   18 GNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
             NPDAKRLYDDLLSNYNRLIRPV N+++++TVK+GLRLSQL+++NLK+QI+TTNVW+E EW D K KW+P++YGGV  ++VPSEHIWLPDI+LYN
Sbjct:   21 ANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 115

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|14286096|sp|P25162.3|ACH4_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 2; AltName: Full=Nicotinic acetylcholine receptor beta 2; Flags: Precursor)

HSP 1 Score: 155.221 bits (391), Expect = 4.571e-45
Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 0

Query:    5 WVVLIVFLVG---------RAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            W +L VFL+            + NPD KRLYDDLLSNYNRLIRPV N+TE +TV LGL+LSQL+E+NLK+Q++TTN+W++  W D K +WDPEEYGGV ++YVPSEHIW+PDI+LYN
Sbjct:    4 WSLLCVFLLVPLANSTAPISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYN 120

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|2492618|sp|P91766.1|ACH1_MANSE (RecName: Full=Acetylcholine receptor subunit alpha-like; AltName: Full=MARA1; Flags: Precursor)

HSP 1 Score: 143.28 bits (360), Expect = 1.580e-40
Identity = 64/105 (60.95%), Postives = 87/105 (82.86%), Query Frame = 0

Query:    8 LIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            +++F  G A GNPDAKRLYDDLLSNYN+L+RPV N ++ +TV++ L+LSQL+++NLK+QI+TTN+W+E  W D K  W+P EYGGV  ++VPS+HIW PDI+LYN
Sbjct:   12 VVLFATGCA-GNPDAKRLYDDLLSNYNKLVRPVLNVSDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLSWEPREYGGVEMLHVPSDHIWRPDIVLYN 115

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|75023400|sp|Q9N587.2|ACH6_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-63; AltName: Full=Levamisole-resistant protein 7; AltName: Full=Uncoordinated protein 63; Flags: Precursor)

HSP 1 Score: 129.413 bits (324), Expect = 1.619e-35
Identity = 59/117 (50.43%), Postives = 87/117 (74.36%), Query Frame = 0

Query:    1 MGP---GWVVLIVFLV--GRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            MGP   G+  +++FL+       N DA RL++DL+++YN+L+RPVS + E + V   L+LSQL++++ K+QI+TTNVW++H W D K +WDP EYGGV  +YVPS+ IWLPD++LYN
Sbjct:    1 MGPNDHGFAYILIFLLLSPPTHANRDANRLFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYN 117

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|2492621|sp|Q23022.1|ACH5_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-38; AltName: Full=Uncoordinated protein 38; Flags: Precursor)

HSP 1 Score: 119.398 bits (298), Expect = 8.126e-32
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0

Query:   12 LVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
             +   +GN DAKRLYDDL+ NYNR  RP ++  + +T+KL LRLSQ+++++  DQI+T +VW++  W D K  WDP  YGGV  +YVP E IW+PDI+LYN
Sbjct:   17 FIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYN 117

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|2851491|sp|P12389.2|ACHA2_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 112.464 bits (280), Expect = 3.058e-29
Identity = 52/110 (47.27%), Postives = 75/110 (68.18%), Query Frame = 0

Query:    5 WVVLIVFLVGRAQGNPDAK--RLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            W +L+V  V   QG+      RL+  L   YNR  RPV N ++ V V+ GL ++QL++++ K+Q++TTNVW++ EW D K +WDP E+G VT + VPSE IW+PDI+LYN
Sbjct:   17 WCLLLVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIPDIVLYN 126

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|62901488|sp|Q91X60.1|ACHA2_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 112.464 bits (280), Expect = 3.471e-29
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 0

Query:    5 WVVLIVFLVGRAQGNPD--AKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            W +L++  V   QG+      RL+  L   YNR  RPV N ++ V V+ GL ++QL++++ K+Q++TTNVW++ EW D K +WDP E+G +T + VPSE IW+PDI+LYN
Sbjct:   17 WCLLLMPAVLAQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYN 126

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Match: gi|113053|sp|P09480.1|ACHA2_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 111.694 bits (278), Expect = 6.014e-29
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0

Query:    5 WVVLIVFLVGRAQGNPDA---KRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            W  + +    R Q  P      RL+  L + YNR  RPV N ++ V VK GL ++QL++++ K+Q++TTNVW++ EW D K +W+PE++  VT I VPSE IW+PDI+LYN
Sbjct:   14 WCFVTLQAATREQKQPHGFAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYN 124

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|419184285|gb|AFX68725.1| (nicotinic acetylcholine receptor alpha2 subunit, partial [Lucilia cuprina])

HSP 1 Score: 183.726 bits (465), Expect = 1.146e-56
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            +V+ + L    Q NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:   20 LVVFILLCESVQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 126

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|1037081858|ref|XP_016986478.1| (PREDICTED: acetylcholine receptor subunit alpha-like 2 [Drosophila rhopaloa])

HSP 1 Score: 180.259 bits (456), Expect = 2.155e-56
Identity = 84/97 (86.60%), Postives = 93/97 (95.88%), Query Frame = 0

Query:   17 QGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYNK 113
            Q NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYNK
Sbjct:   38 QANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNK 134

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|218669714|gb|ACL00340.1| (truncated nicotinic acetylcholine receptor a2 subunit [Tribolium castaneum])

HSP 1 Score: 179.104 bits (453), Expect = 7.547e-56
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 0

Query:    7 VLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYNK 113
            + +  LVG +  NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL+ELNLKDQILTTNVW+EHEW+D+KF W P+EYGGVTE+YVPSEHIWLPDI+LYNK
Sbjct:    9 LFLSVLVGFSHTNPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIELNLKDQILTTNVWLEHEWQDHKFVWGPDEYGGVTELYVPSEHIWLPDIVLYNK 115

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|668454933|gb|KFB43308.1| (AGAP002972-PA-like protein [Anopheles sinensis])

HSP 1 Score: 189.119 bits (479), Expect = 4.447e-55
Identity = 85/108 (78.70%), Postives = 99/108 (91.67%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYNK 113
            +VL+  ++G    NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTN+W+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYNK
Sbjct:   20 IVLLCMVIGSVWANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIWLEHEWQDHKFKWDPAEYGGVTELYVPSEHIWLPDIVLYNK 127

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|817059117|ref|XP_012251054.1| (acetylcholine receptor subunit alpha-like 2 isoform X2 [Athalia rosae])

HSP 1 Score: 187.578 bits (475), Expect = 5.211e-55
Identity = 86/107 (80.37%), Postives = 99/107 (92.52%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
             +L+V  VG  +GNPDAKRLYDDLLSNYNRLIRPV+N+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:    5 ALLLVITVGICRGNPDAKRLYDDLLSNYNRLIRPVTNNTDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 111

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|1108466844|emb|CRL05582.1| (CLUMA_CG018218, isoform A [Clunio marinus])

HSP 1 Score: 188.734 bits (478), Expect = 6.770e-55
Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 0

Query:    7 VLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            V+IV L+  AQ NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTN+W+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:   15 VIIVSLLTIAQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIWLEHEWQDHKFKWDPAEYGGVTELYVPSEHIWLPDIVLYN 120

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|817059115|ref|XP_012251053.1| (acetylcholine receptor subunit alpha-like 2 isoform X1 [Athalia rosae])

HSP 1 Score: 187.963 bits (476), Expect = 8.227e-55
Identity = 86/107 (80.37%), Postives = 99/107 (92.52%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
             +L+V  VG  +GNPDAKRLYDDLLSNYNRLIRPV+N+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KFKWDP EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:    5 ALLLVITVGICRGNPDAKRLYDDLLSNYNRLIRPVTNNTDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYN 111

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|1285022419|ref|XP_023023439.1| (acetylcholine receptor subunit alpha-L1 [Leptinotarsa decemlineata] >gi|215274047|gb|ACJ64921.1| nicotinic acetylcholine receptor alpha 2 [Leptinotarsa decemlineata])

HSP 1 Score: 187.578 bits (475), Expect = 1.246e-54
Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = 0

Query:    5 WVVLIVFL--VGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            WV+LI+F+  V  +  NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL+ELNLKDQILTTNVW+EHEW+D+KF WDP+EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:    6 WVLLIIFIFCVDYSFSNPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIELNLKDQILTTNVWLEHEWQDHKFMWDPQEYGGVTELYVPSEHIWLPDIVLYN 115

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|1227960043|ref|XP_021934902.1| (acetylcholine receptor subunit alpha-L1 [Zootermopsis nevadensis])

HSP 1 Score: 187.193 bits (474), Expect = 2.266e-54
Identity = 85/107 (79.44%), Postives = 100/107 (93.46%), Query Frame = 0

Query:    6 VVLIVFLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            + L+ F+V  +Q NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KF+WDP+EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:   26 LALMGFIVTPSQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPQEYGGVTELYVPSEHIWLPDIVLYN 132

[Close]

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Match: gi|646722515|gb|KDR23473.1| (hypothetical protein L798_08675 [Zootermopsis nevadensis])

HSP 1 Score: 186.037 bits (471), Expect = 3.744e-54
Identity = 84/102 (82.35%), Postives = 97/102 (95.10%), Query Frame = 0

Query:   11 FLVGRAQGNPDAKRLYDDLLSNYNRLIRPVSNHTEKVTVKLGLRLSQLVELNLKDQILTTNVWMEHEWKDNKFKWDPEEYGGVTEIYVPSEHIWLPDIILYN 112
            F+V  +Q NPDAKRLYDDLLSNYNRLIRPVSN+T+ V VKLGLRLSQL++LNLKDQILTTNVW+EHEW+D+KF+WDP+EYGGVTE+YVPSEHIWLPDI+LYN
Sbjct:    3 FIVTPSQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPQEYGGVTELYVPSEHIWLPDIVLYN 104

The following BLAST results are available for this feature:

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr

BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 12


Match Name	E-value	Identity	Description
EMLSAG00000006919	6.855e-49	67.92	supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-...	[more]
EMLSAG00000005313	1.973e-44	67.37	supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1...	[more]
EMLSAG00000001002	2.817e-43	60.75	supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1...	[more]
EMLSAG00000009264	4.234e-42	56.76	supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 ...	[more]
EMLSAG00000002955	1.097e-30	57.83	supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 ...	[more]
EMLSAG00000007263	2.047e-26	40.91	supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1...	[more]
EMLSAG00000001191	1.848e-23	40.00	supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 ...	[more]
EMLSAG00000000084	4.278e-20	80.00	supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1...	[more]
EMLSAG00000003136	3.416e-17	35.45	supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-...	[more]
EMLSAG00000006524	1.137e-15	37.08	supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-...	[more]

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|113054\|sp\|P17644.1\|ACH2_DROME	6.001e-55	86.46	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|113050\|sp\|P23414.1\|ACH1_SCHGR	1.902e-53	86.17	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|30581035\|sp\|P09478.2\|ACH1_DROME	4.863e-46	72.63	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|14286096\|sp\|P25162.3\|ACH4_DROME	4.571e-45	62.39	RecName: Full=Acetylcholine receptor subunit beta-...	[more]
gi\|2492618\|sp\|P91766.1\|ACH1_MANSE	1.580e-40	60.95	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|75023400\|sp\|Q9N587.2\|ACH6_CAEEL	1.619e-35	50.43	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|2492621\|sp\|Q23022.1\|ACH5_CAEEL	8.126e-32	52.48	RecName: Full=Acetylcholine receptor subunit alpha...	[more]
gi\|2851491\|sp\|P12389.2\|ACHA2_RAT	3.058e-29	47.27	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|62901488\|sp\|Q91X60.1\|ACHA2_MOUSE	3.471e-29	45.45	RecName: Full=Neuronal acetylcholine receptor subu...	[more]
gi\|113053\|sp\|P09480.1\|ACHA2_CHICK	6.014e-29	45.05	RecName: Full=Neuronal acetylcholine receptor subu...	[more]

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BLAST of truncated nicotinic acetylcholine receptor a2 subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|419184285\|gb\|AFX68725.1\|	1.146e-56	79.44	nicotinic acetylcholine receptor alpha2 subunit, p...	[more]
gi\|1037081858\|ref\|XP_016986478.1\|	2.155e-56	86.60	PREDICTED: acetylcholine receptor subunit alpha-li...	[more]
gi\|218669714\|gb\|ACL00340.1\|	7.547e-56	79.44	truncated nicotinic acetylcholine receptor a2 subu...	[more]
gi\|668454933\|gb\|KFB43308.1\|	4.447e-55	78.70	AGAP002972-PA-like protein [Anopheles sinensis]	[more]
gi\|817059117\|ref\|XP_012251054.1\|	5.211e-55	80.37	acetylcholine receptor subunit alpha-like 2 isofor...	[more]
gi\|1108466844\|emb\|CRL05582.1\|	6.770e-55	82.08	CLUMA_CG018218, isoform A [Clunio marinus]	[more]
gi\|817059115\|ref\|XP_012251053.1\|	8.227e-55	80.37	acetylcholine receptor subunit alpha-like 2 isofor...	[more]
gi\|1285022419\|ref\|XP_023023439.1\|	1.246e-54	80.00	acetylcholine receptor subunit alpha-L1 [Leptinota...	[more]
gi\|1227960043\|ref\|XP_021934902.1\|	2.266e-54	79.44	acetylcholine receptor subunit alpha-L1 [Zootermop...	[more]
gi\|646722515\|gb\|KDR23473.1\|	3.744e-54	82.35	hypothetical protein L798_08675 [Zootermopsis neva...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold33_size549341	supercontig	scaffold33_size549341:167..657 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:acetylcholine-activated cation-selective channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold33_size549341-snap-gene-0.20-mRNA-1	maker-scaffold33_size549341-snap-gene-0.20-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold33_size549341:167..657-

gene from alignment at scaffold33_size549341:167..657-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold33_size549341-snap-gene-0.20 ID=maker-scaffold33_size549341-snap-gene-0.20|Name=truncated nicotinic acetylcholine receptor a2 subunit|organism=Tigriopus kingsejongensis|type=gene|length=491bp|location=Sequence derived from alignment at scaffold33_size549341:167..657- (Tigriopus kingsejongensis)
ATGGGTCCTGGGTGGGTGGTGCTGATCGTGTTCCTGGTGGGCAGGGCTCA
AGGAAATCCGGACGCCAAGCGGCTCTACGACGATCTACTGTCAAATTACA
ATCGCCTCATCAGGCCTGTGTCCAATCACACAGAAAAGGTGACCGTCAAA
TTGGGCCTCCGGCTCTCACAACTTGTAGAATTGGTAAGTCTAAGATCCTG
GGAGCGGGCATGCCGTGATTGACCATTCATGTTCAATTTGTTCATGCTTG
CAGAATCTAAAGGATCAAATCCTCACCACCAATGTCTGGATGGAACATGT
AAGTGCCTTTCGAGAGCTAAGTGGGGTGTTGAAATAGTAAGAAGATACAT
GCAAACTACCCATTGGCTCATTCCTAGGAATGGAAGGACAACAAATTCAA
ATGGGATCCCGAGGAATACGGAGGTGTGACAGAAATATACGTTCCATCCG
AGCATATCTGGCTGCCAGATATCATACTTTACAACAAGTAA

Synonyms

The feature 'truncated nicotinic acetylcholine receptor a2 subunit' has the following synonyms


Synonym
Tk11522

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