sporulation protein, maker-scaffold346_size200932-snap-gene-1.19 (gene) Tigriopus kingsejongensis

Overview
Namesporulation protein
Unique Namemaker-scaffold346_size200932-snap-gene-1.19
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of sporulation protein vs. L. salmonis genes
Match: EMLSAG00000001535 (supercontig:LSalAtl2s:LSalAtl2s1266:54680:56964:1 gene:EMLSAG00000001535 transcript:EMLSAT00000001535 description:"maker-LSalAtl2s1266-augustus-gene-0.9")

HSP 1 Score: 103.605 bits (257), Expect = 1.061e-23
Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   66 TMITSTPPIVSTRAMK-AKEKGCYMWVHLLSTICTEWAQNSMVL-----SPGTQIGARVMTTA---------NKTNEVTSILQALAGT--DHQHASNPVEKQPKTIHRCILQRANRSKTSSNRI-ECHVCEASYPSYDKYFTHLIDTTCAKQK 200
            +++T  PP+ S    K    K C +W+HL + I TEW QNS+V+     +  T+IG++ +T             T+   S ++  A T  + +H        PKT+HRCILQ +++SK S + + ECHVC   Y SYDKYF HLI+  CA+QK
Sbjct:   64 SILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQK 216          

HSP 2 Score: 68.1662 bits (165), Expect = 2.189e-12
Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 0
Query:  430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARIT-QMGYPDTDILAVLKT--VLSDAPSRVASISDDCTESCQCFGDS---------LQLRFRKLKRKLLTTRRNIQSFLE 539
            CPH  +  LPA+S+ ++ +DE  L+ L+ Q+T L++ + GE ++T ++GYP  D+  +L+T  ++      V S  D C   CQ               QL++R LKR++ + ++NI  F++
Sbjct:  354 CPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475          
BLAST of sporulation protein vs. L. salmonis genes
Match: EMLSAG00000003533 (supercontig:LSalAtl2s:LSalAtl2s193:304110:332546:-1 gene:EMLSAG00000003533 transcript:EMLSAT00000003533 description:"maker-LSalAtl2s193-augustus-gene-3.7")

HSP 1 Score: 62.003 bits (149), Expect = 2.817e-10
Identity = 39/147 (26.53%), Postives = 73/147 (49.66%), Query Frame = 0
Query:  430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARIT-QMGYPDTDILAVLKTVLSDAPSRVASISDD--CTESCQCFGDSL---QLRFRKLKRKLLTTRRNIQSFLEICV-NQDIWSQ--WKNKPVEDVLQDIMQRGV 567
            CPH     LP++   E A D+ +L TL+ QL  ++  LLG +++  +  Y  + +  +L  +L  A S +  + ++  C   C     SL   +L  R +K +L   R NI   L +CV +++ W +  W    ++++L ++ Q  +
Sbjct:  473 CPHKSVLQLPSIPASEQARDQLKLVTLQAQLGYILTGLLGYSKLNVEYDYSRSSVHQILHKIL--AQSNIKPVEENYLCNAECNSIVSSLDKKELFLRIIKLRLHVIRANIGKLLCVCVPHRNEWKKFHWDGLTIDEILDNLTQEDI 617          
BLAST of sporulation protein vs. nr
Match: gi|1325309528|ref|XP_023336385.1| (uncharacterized protein LOC111707510 isoform X2 [Eurytemora affinis])

HSP 1 Score: 80.4925 bits (197), Expect = 3.602e-12
Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   54 QEEPRSYLRL----EPTMITSTPPIVSTRAMKAKEKGCYMWVHLLSTICTEWAQNSMVLSPGTQIGARVMTTANKTNEVTSILQALAGTDHQHA-------------SNPVE---KQPKTIHRCILQRANRSKTS-SNRIECHVCEASYPSYDKYFTHLIDTTCAKQKEA 202
            +E P++ ++     E + I+S P  +     K   +   MWVHL ++ICTEW Q+SMV+  G+++         +  +  S+   L+    QH+             ++P +   K+P+TIHRCIL+ +   + +  + + CHVC ++Y +Y  Y THL+DTTC K ++ 
Sbjct:   31 KENPKTQIQCGYLSETSSISSKPLDICGNETKRGSR--IMWVHLQASICTEWEQSSMVMMTGSEV--------QQDPDSGSVNTGLSNLPQQHSPGKDSISRSLSSLTSPGQNGFKRPRTIHRCILKTSTSLQDALGSGLVCHVCISAYSTYKSYLTHLMDTTCLKLQQG 190          
BLAST of sporulation protein vs. nr
Match: gi|1325309526|ref|XP_023336383.1| (uncharacterized protein LOC111707510 isoform X1 [Eurytemora affinis])

HSP 1 Score: 80.4925 bits (197), Expect = 3.734e-12
Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   54 QEEPRSYLRL----EPTMITSTPPIVSTRAMKAKEKGCYMWVHLLSTICTEWAQNSMVLSPGTQIGARVMTTANKTNEVTSILQALAGTDHQHA-------------SNPVE---KQPKTIHRCILQRANRSKTS-SNRIECHVCEASYPSYDKYFTHLIDTTCAKQKEA 202
            +E P++ ++     E + I+S P  +     K   +   MWVHL ++ICTEW Q+SMV+  G+++         +  +  S+   L+    QH+             ++P +   K+P+TIHRCIL+ +   + +  + + CHVC ++Y +Y  Y THL+DTTC K ++ 
Sbjct:   31 KENPKTQIQCGYLSETSSISSKPLDICGNETKRGSR--IMWVHLQASICTEWEQSSMVMMTGSEV--------QQDPDSGSVNTGLSNLPQQHSPGKDSISRSLSSLTSPGQNGFKRPRTIHRCILKTSTSLQDALGSGLVCHVCISAYSTYKSYLTHLMDTTCLKLQQG 190          

HSP 2 Score: 70.0922 bits (170), Expect = 6.364e-9
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0
Query:  430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARITQMGYPDTDILAVLKTVLSDAPSRVASISDDCTESCQC-FGDSLQLRFRKLKRKLLTTRRNIQSFLEICV-NQDIWS--QWKNKPVEDVLQDIMQRGVG 568
            CP   A  L  +++ E+A D      L  +L+  +++LLGE R+ + G+P  ++  VLK +L+ A   VA     CTE C+   G  +Q  FR  + +L T + NI + L+ICV +  +W+   WK+     +LQ   + G+ 
Sbjct:  385 CPCSAALRLQPLTMQENAVDICEENDLHKKLSTFLISLLGEKRLREYGFPKLEMNNVLKKILTVANVPVAKEDALCTERCKMDSGSGMQKVFRSSRYRLQTLKTNIIALLQICVPDVSMWNLFGWKDCNAGQILQICAENGLN 527          
The following BLAST results are available for this feature:
BLAST of sporulation protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000015351.061e-2337.91supercontig:LSalAtl2s:LSalAtl2s1266:54680:56964:1 ... [more]
EMLSAG000000035332.817e-1026.53supercontig:LSalAtl2s:LSalAtl2s193:304110:332546:-... [more]
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BLAST of sporulation protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of sporulation protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 2
Match NameE-valueIdentityDescription
gi|1325309528|ref|XP_023336385.1|3.602e-1230.00uncharacterized protein LOC111707510 isoform X2 [E... [more]
gi|1325309526|ref|XP_023336383.1|3.734e-1230.00uncharacterized protein LOC111707510 isoform X1 [E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold346_size200932supercontigscaffold346_size200932:138197..140333 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold346_size200932-snap-gene-1.19-mRNA-1maker-scaffold346_size200932-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold346_size200932:138197..140333-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold346_size200932-snap-gene-1.19 ID=maker-scaffold346_size200932-snap-gene-1.19|Name=sporulation protein|organism=Tigriopus kingsejongensis|type=gene|length=2137bp|location=Sequence derived from alignment at scaffold346_size200932:138197..140333- (Tigriopus kingsejongensis)
ATGAGCACGAGTGTGCTCCCCAGCAGCACGGTGCCCATAATCCGCACTGA GCCCGCCCAAGTCCGCCTCAGCCGCAACATTCGTATCCGCAATCCGAGCG AACTGAACTCCTCGGTCTGCCTGCAGCCAGAATCGCCGGATTTGCCCGTT TTGCGCTGGCAGGAAGAGCCTCGGTCCTACTTGAGGTTGGAGCCCACCAT GATCACGAGCACGCCGCCCATTGTCTCGACTAGGGCCATGAAGGCCAAAG AAAAAGGGTGTTACATGTGGGTCCACCTCCTGTCCACCATTTGCACAGAG TGGGCTCAAAACTCCATGGTCCTGAGTCCCGGGACGCAGATTGGGGCTCG AGTCATGACGACGGCTAATAAGACCAATGAAGTGACATCCATCTTGCAGG TAAGCCCAGGGGTCAAAGTGTGTCAGGAGGCGAGAGAAACAGCTGGATGG AATGACCTTCAGGCTCGGACGGCGATATGGGGCAGTCATGTGTCCAAGTC ATTGGAGGGGCTTTGATAACCGACTTATCATCATCATTATTGGCCTGTGT ATTGAGCCCACTGTCCAGGCCTATGATCAATTAAAATTAAAGATAGCGGA CTTTTATCTCAAGCTTCTGCCTGACCTCTCTAGAATGGTCCAAACTGATA TCCCCCATAGATACGAGCATTCCGGGCGCCAATAACCCATATGCCTTCCT TTTTTACAGGCTTTGGCTGGCACTGACCACCAACATGCCTCCAATCCGGT GGAGAAGCAGCCGAAAACCATTCATCGCTGCATTTTGCAACGGGCCAACC GCTCCAAAACCTCTTCGAATCGGATCGAGTGCCACGTGTGCGAGGCCTCC TACCCTTCCTACGACAAATACTTCACTCACCTCATCGACACCACGTGTGC CAAGCAAAAGGAGGCCCTGGAATTGGCTGGCCCTCAGAAGAGCCCCGATC TCCCGTCCTCGACCGTAGGCCTCGCAAAGAAGCCACTCAAACCGCGGAAA TTGAGGTCAGTGCCCCAGCCCCTCGTTCTGCCCGGACGGAAGTCGGTCTC CAGTAGTCAGCTCTTGCGGAGCCCCTTGGAGGGCATGCGCGTTTTGAGCG AGATCCAAGTGTCTCCGGACGCATTGCAGCCCTTACGGAAAAAGCGGCCT CTGGACCAGCACTGGATGGGTCGGCCTCGGAGCACGGCGGCCCAGAGCGA GGTGGACGTGGAGGGCAGTGATACAGAGTCAGACGGGGGCCAGGGGACAA TGAACAAGGTGATGCGGCCTCAGTGGGAGCAGTTGCCACTGAATTTGAGC ACCAAGGTCTATCCGACGGCCACCGTGACCAGTCTGCCCTCGGACACGCC AGCCTTATTGCCTCTGAGGAAGTGCCCCTCCACGTCCTCTATGACAGGAG TGTGTTTCGCAATGTCCCCCTTCACGTCCTCGAACAGTGAAGCGAGCCTG AAGTCCGACGACATGGAGCGACCCACCTCGGACACTCTCCGCCTCCTGGT CGGGTCCATCACCGAGTCGGATAACGGCAGGTCCCTCAAATTGGGCAAGT CCGAGGACGGCCAGCCCAAACTGGTCCAAGTTGGCCTGGCCTACAATTGT CCTCACATCGAGGCCGCCACCCTACCCGCCGTGAGCCTCCTGGAGCACGC CAGTGACGAGGCCCGACTGGCCACTCTCAAGGTCCAGTTGACCAATCTGA TGGTCACGTTGCTCGGAGAGGCCAGGATCACCCAAATGGGCTACCCCGAT ACTGACATCCTCGCCGTCCTCAAAACGGTCCTGAGTGATGCGCCGAGCCG CGTCGCCTCCATTAGCGACGACTGCACCGAGTCTTGCCAATGTTTTGGCG ACTCGCTTCAGTTGCGCTTCCGGAAGTTGAAGCGCAAACTTTTGACCACG CGGAGGAATATCCAGAGCTTCCTGGAGATCTGTGTGAACCAGGACATCTG GAGCCAGTGGAAGAACAAGCCCGTAGAGGACGTGTTGCAGGATATCATGC AACGCGGCGTGGGTCACCTCGACCACCACGCTCTGGTGTACTCGGGGAGC GGTAATTTTTCCCACGGACGCCACCACGATCACCTGTGATAAGCGTGGTC CTGTGCCCGTTATAATTATGACCACCACGCATTCAAA
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Synonyms
The feature 'sporulation protein' has the following synonyms
Synonym
Tk04305
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