sporulation protein, maker-scaffold346_size200932-snap-gene-1.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of sporulation protein vs. L. salmonis genes
Match: EMLSAG00000001535 (supercontig:LSalAtl2s:LSalAtl2s1266:54680:56964:1 gene:EMLSAG00000001535 transcript:EMLSAT00000001535 description:"maker-LSalAtl2s1266-augustus-gene-0.9") HSP 1 Score: 103.605 bits (257), Expect = 1.061e-23 Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 66 TMITSTPPIVSTRAMK-AKEKGCYMWVHLLSTICTEWAQNSMVL-----SPGTQIGARVMTTA---------NKTNEVTSILQALAGT--DHQHASNPVEKQPKTIHRCILQRANRSKTSSNRI-ECHVCEASYPSYDKYFTHLIDTTCAKQK 200 +++T PP+ S K K C +W+HL + I TEW QNS+V+ + T+IG++ +T T+ S ++ A T + +H PKT+HRCILQ +++SK S + + ECHVC Y SYDKYF HLI+ CA+QK Sbjct: 64 SILTERPPVTSNNFHKQIASKSCTIWIHLQANISTEWEQNSIVINNPKTTAATKIGSKTLTKVPFSIQKTFTTPTSMTMSPIKIEASTIPEGRHMDENDSFNPKTVHRCILQTSDKSKYSKSFVLECHVCHWEYSSYDKYFKHLIELHCARQK 216 HSP 2 Score: 68.1662 bits (165), Expect = 2.189e-12 Identity = 38/122 (31.15%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARIT-QMGYPDTDILAVLKT--VLSDAPSRVASISDDCTESCQCFGDS---------LQLRFRKLKRKLLTTRRNIQSFLE 539 CPH + LPA+S+ ++ +DE L+ L+ Q+T L++ + GE ++T ++GYP D+ +L+T ++ V S D C CQ QL++R LKR++ + ++NI F++ Sbjct: 354 CPHWASKYLPALSVNDNVNDEITLSELRAQITKLLLLVFGEEKLTVELGYPVKDVFEILETASLVYGRIENVYSEIDACRVECQRQTKENSTSTSYFITQLKYRLLKRRINSIKKNILKFIK 475
BLAST of sporulation protein vs. L. salmonis genes
Match: EMLSAG00000003533 (supercontig:LSalAtl2s:LSalAtl2s193:304110:332546:-1 gene:EMLSAG00000003533 transcript:EMLSAT00000003533 description:"maker-LSalAtl2s193-augustus-gene-3.7") HSP 1 Score: 62.003 bits (149), Expect = 2.817e-10 Identity = 39/147 (26.53%), Postives = 73/147 (49.66%), Query Frame = 0 Query: 430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARIT-QMGYPDTDILAVLKTVLSDAPSRVASISDD--CTESCQCFGDSL---QLRFRKLKRKLLTTRRNIQSFLEICV-NQDIWSQ--WKNKPVEDVLQDIMQRGV 567 CPH LP++ E A D+ +L TL+ QL ++ LLG +++ + Y + + +L +L A S + + ++ C C SL +L R +K +L R NI L +CV +++ W + W ++++L ++ Q + Sbjct: 473 CPHKSVLQLPSIPASEQARDQLKLVTLQAQLGYILTGLLGYSKLNVEYDYSRSSVHQILHKIL--AQSNIKPVEENYLCNAECNSIVSSLDKKELFLRIIKLRLHVIRANIGKLLCVCVPHRNEWKKFHWDGLTIDEILDNLTQEDI 617
BLAST of sporulation protein vs. nr
Match: gi|1325309528|ref|XP_023336385.1| (uncharacterized protein LOC111707510 isoform X2 [Eurytemora affinis]) HSP 1 Score: 80.4925 bits (197), Expect = 3.602e-12 Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 54 QEEPRSYLRL----EPTMITSTPPIVSTRAMKAKEKGCYMWVHLLSTICTEWAQNSMVLSPGTQIGARVMTTANKTNEVTSILQALAGTDHQHA-------------SNPVE---KQPKTIHRCILQRANRSKTS-SNRIECHVCEASYPSYDKYFTHLIDTTCAKQKEA 202 +E P++ ++ E + I+S P + K + MWVHL ++ICTEW Q+SMV+ G+++ + + S+ L+ QH+ ++P + K+P+TIHRCIL+ + + + + + CHVC ++Y +Y Y THL+DTTC K ++ Sbjct: 31 KENPKTQIQCGYLSETSSISSKPLDICGNETKRGSR--IMWVHLQASICTEWEQSSMVMMTGSEV--------QQDPDSGSVNTGLSNLPQQHSPGKDSISRSLSSLTSPGQNGFKRPRTIHRCILKTSTSLQDALGSGLVCHVCISAYSTYKSYLTHLMDTTCLKLQQG 190
BLAST of sporulation protein vs. nr
Match: gi|1325309526|ref|XP_023336383.1| (uncharacterized protein LOC111707510 isoform X1 [Eurytemora affinis]) HSP 1 Score: 80.4925 bits (197), Expect = 3.734e-12 Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 54 QEEPRSYLRL----EPTMITSTPPIVSTRAMKAKEKGCYMWVHLLSTICTEWAQNSMVLSPGTQIGARVMTTANKTNEVTSILQALAGTDHQHA-------------SNPVE---KQPKTIHRCILQRANRSKTS-SNRIECHVCEASYPSYDKYFTHLIDTTCAKQKEA 202 +E P++ ++ E + I+S P + K + MWVHL ++ICTEW Q+SMV+ G+++ + + S+ L+ QH+ ++P + K+P+TIHRCIL+ + + + + + CHVC ++Y +Y Y THL+DTTC K ++ Sbjct: 31 KENPKTQIQCGYLSETSSISSKPLDICGNETKRGSR--IMWVHLQASICTEWEQSSMVMMTGSEV--------QQDPDSGSVNTGLSNLPQQHSPGKDSISRSLSSLTSPGQNGFKRPRTIHRCILKTSTSLQDALGSGLVCHVCISAYSTYKSYLTHLMDTTCLKLQQG 190 HSP 2 Score: 70.0922 bits (170), Expect = 6.364e-9 Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 430 CPHIEAATLPAVSLLEHASDEARLATLKVQLTNLMVTLLGEARITQMGYPDTDILAVLKTVLSDAPSRVASISDDCTESCQC-FGDSLQLRFRKLKRKLLTTRRNIQSFLEICV-NQDIWS--QWKNKPVEDVLQDIMQRGVG 568 CP A L +++ E+A D L +L+ +++LLGE R+ + G+P ++ VLK +L+ A VA CTE C+ G +Q FR + +L T + NI + L+ICV + +W+ WK+ +LQ + G+ Sbjct: 385 CPCSAALRLQPLTMQENAVDICEENDLHKKLSTFLISLLGEKRLREYGFPKLEMNNVLKKILTVANVPVAKEDALCTERCKMDSGSGMQKVFRSSRYRLQTLKTNIIALLQICVPDVSMWNLFGWKDCNAGQILQICAENGLN 527 The following BLAST results are available for this feature:
BLAST of sporulation protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of sporulation protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of sporulation protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold346_size200932:138197..140333- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold346_size200932-snap-gene-1.19 ID=maker-scaffold346_size200932-snap-gene-1.19|Name=sporulation protein|organism=Tigriopus kingsejongensis|type=gene|length=2137bp|location=Sequence derived from alignment at scaffold346_size200932:138197..140333- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'sporulation protein' has the following synonyms
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