low quality protein: splicing factor 3b subunit 2-like, maker-scaffold367_size194084-snap-gene-0.41 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. L. salmonis genes
Match: EMLSAG00000000258 (supercontig:LSalAtl2s:LSalAtl2s103:1007702:1010418:-1 gene:EMLSAG00000000258 transcript:EMLSAT00000000258 description:"maker-LSalAtl2s103-snap-gene-10.23") HSP 1 Score: 785.023 bits (2026), Expect = 0.000e+0 Identity = 428/580 (73.79%), Postives = 490/580 (84.48%), Query Frame = 0 Query: 476 KRKKNRPEEWARQAAEAERKKKEEDEKPSEPE-VEIEYVPEKVELDM-ADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIK---REELNKVPKLLEEDDLIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 K+++NRP EWA QA + E KKKEE E+ + VEIEY+ E ++ D+ DP YR + KIF+ FKI+ ++ +++ +++I+ R+E KVPKLLEEDDL+ D +DDD PK+SKRK+KKLNRLSVAELKQLV RPD VEMHDVTA DPRLLVHLKSTRN+VPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKE+SK +K+KMREKVRPKLGKIDIDYQKLHDAFFKWQ+KPRMT HGDLYYEGKEFEIRLKEKKPGDL+D+LRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNA IP+ CSFGYHAGGWGKPPVDE GKPLYGDVFGT+D A+ S+P EEID ++WGE+ESESEEEEEE EEE +E G+QTPVVDAG ATPSG+SSV G +G ETPE L++LRKKRIEA+ME ETPNLYTVIPEKRN+RIG+SMMGSTHTYD+T +G + ++TG G +D VELALNPEEVDLMDTEAMQ RAEAA++ +QASLAKED SDMVAEHAAKQ++KRKR A KDEG +KKYKEFKF Sbjct: 215 KKRRNRPLEWAMQAEKEELKKKEEAEQNGDDTIVEIEYIHENIDTDLLCDPKYRQYVKIFETFKIRGKDEMERTNEEREKEIQKKLRDEFKKVPKLLEEDDLVNEVD-EDDDIPKLSKRKLKKLNRLSVAELKQLVDRPDXVEMHDVTAWDPRLLVHLKSTRNSVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEESKGLKSKMREKVRPKLGKIDIDYQKLHDAFFKWQTKPRMTGHGDLYYEGKEFEIRLKEKKPGDLSDDLRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPDGCSFGYHAGGWGKPPVDETGKPLYGDVFGTSDTAYASSLPPEEIDRSMWGEMESESEEEEEESEEEEGDEVSEEVTPDKVGIQTPVVDAGLATPSGMSSV-GLVGGETPE-LLELRKKRIEADMESSETPNLYTVIPEKRNDRIGSSMMGSTHTYDLTGQGVK-ANTGK---GPLDTIPVELALNPEEVDLMDTEAMQIRAEAAIKEQQASLAKEDFSDMVAEHAAKQSNKRKRLA-AKDEGSKSSKKYKEFKF 786
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. SwissProt
Match: gi|296452908|sp|Q13435.2|SF3B2_HUMAN (RecName: Full=Splicing factor 3B subunit 2; AltName: Full=Pre-mRNA-splicing factor SF3b 145 kDa subunit; Short=SF3b145; AltName: Full=Spliceosome-associated protein 145; Short=SAP 145) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 343/550 (62.36%), Postives = 414/550 (75.27%), Query Frame = 0 Query: 507 EVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDADDDDQ------PKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 +VEIEYV E+ E+ +P + F +IF+AFK+ ++ +++ + P + D K EE+ D+ DD+Q PK+SK+K++++NR +VAELKQLV RPDVVEMHDVTA+DP+LLVHLK+TRN+VPVPRHWCFKRKYLQGKRGIEKPPF+LPDFIK+TGI EMR ALQEKE+ KTMK+KMREKVRPK+GKIDIDYQKLHDAFFKWQ+KP++T+HGDLYYEGKEFE RLKEKKPGDL+DELR +LGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLN+ IPESCSFGYHAGGWGKPPVDE GKPLYGDVFGT A F EEID WGELE EE EEE EEE +E++ +G TP D+G TP G SSV GMETPE L++LRKK+IE M+G ETP L+TV+PEKR +G +MMGSTH YD++ S+ K P + GVE+AL PEE++L D AM + E +R +QA + KED SDMVAEHAAKQ K+++ + + G+KKYKEFKF Sbjct: 366 DVEIEYVTEEPEI--YEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSEEEEEEESDEDK----PDETGFITP-ADSGLITPGGFSSVPA--GMETPE-LIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSR------KGPA-PELQGVEVALAPEELEL-DPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQ--PQDSRGGSKKYKEFKF 895
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. SwissProt
Match: gi|74626029|sp|Q9UUI3.1|SA145_SCHPO (RecName: Full=Pre-mRNA-splicing factor sap145; AltName: Full=Spliceosome-associated protein 145) HSP 1 Score: 310.457 bits (794), Expect = 2.095e-92 Identity = 158/318 (49.69%), Postives = 217/318 (68.24%), Query Frame = 0 Query: 513 VPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDAD---DDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTA 827 + + VELD DP+ F +F+ FK +E + E+ +K + +D+++ + D + K+SK+K++KL R++VA+LK L + DVVE DV++ DP L HLK+ NTVPVPRHW KR YL G+RGIE+ F+LP +I+ TGI++MR A+ E E ++ KMRE+V+PK+GK+DIDYQKLHDAFF++Q+KP +T G+ Y+EGKE E +KEK+PGD+++ELR ALG+ G PPPWL AMQRYGPPPSYP+LKIPG+N IP +G+H GGWGKPPVD+ +PLYGDVFG Sbjct: 112 IVDSVELDPNDPLIEQFKDVFNRFKADGQEKD------------FEDTDKGQIMYSDDEILSEGEEDALQKQQEEKLSKKKLRKLKRMTVAQLKMLSEKADVVEWWDVSSLDPLFLTHLKAYPNTVPVPRHWNQKRDYLSGQRGIERQLFELPSYIRATGIVQMRNAVHENEADMPLRQKMRERVQPKMGKLDIDYQKLHDAFFRYQTKPVLTGFGECYFEGKELEADVKEKRPGDISEELREALGIAPG-----APPPWLFAMQRYGPPPSYPDLKIPGVNCPIPTGAQWGFHPGGWGKPPVDQFNRPLYGDVFGNV 412
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. SwissProt
Match: gi|2498270|sp|Q02554.1|CUS1_YEAST (RecName: Full=Cold sensitive U2 snRNA suppressor 1) HSP 1 Score: 176.022 bits (445), Expect = 2.505e-46 Identity = 104/290 (35.86%), Postives = 163/290 (56.21%), Query Frame = 0 Query: 529 FAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDADDDD---------QPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAAL----QEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFK----WQSKP-RMTMHGDLYYEGK------EFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAI 794 F + F++QE + P+E K E+ N V ++E++ ++ + +D+ + +S RK +K + S+++LK VP P ++E +D AR P LL +K T+N +PVP HW K++YL G+ + K PF+LPD IKKT I +MR+ L + +D K++K R +V+PK+G +D+DY+KLHD FFK W KP + GD+YYE + ++ + K+PG ++ ELR + +P G PPW + M+ G P YP+LKI GLN I Sbjct: 63 FKDVLQRFQVQENDT-------PKEITKDEKNNHVV-IVEKNPVMNRKHTAEDELEDTPSDGIEEHLSARKRRKTEKPSLSQLKSQVPYPQIIEWYDCDARYPGLLASIKCTKNVIPVPSHWQSKKEYLSGRSLLGKRPFELPDIIKKTNIEQMRSTLPQSGLDGQDEKSLKEASRARVQPKMGALDLDYKKLHDVFFKIGANW--KPDHLLCFGDVYYENRNLFEETNWKRMVDHKRPGRISQELRAIMNLPEGQ-----LPPWCMKMKDIGLPTGYPDLKIAGLNWDI 337
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1325277895|ref|XP_023323585.1| (splicing factor 3B subunit 2-like [Eurytemora affinis]) HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0 Identity = 411/608 (67.60%), Postives = 474/608 (77.96%), Query Frame = 0 Query: 481 RPEEWARQAAEAERKKKEEDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAG--------------------------GW-----------GKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNL-YTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 RPE+WA +A A+R++ EE+ K +E EVE+EY+ ++++LD +DPMYRTF KIF AFKI E+ E E +E EE KVPK+LEEDD++E + D + K+SKRK+KKL+RLSVAELKQLV RPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMR ALQEKED+K MK+K REKVRPKLGKIDIDYQKLHDAFFKWQ+KPRMTMHGDLYYEGKEFEIRLKEKKPGDLTD+LRTALGMPVGPNAHKVP PWLIAMQRYGPPPSYPNLKI GLNA IP+ CSFGYHAG W VDEAGKPLYGDVFGT+D+ + P E+ID LWGE+ESESEEE + + E+E+EEEEG V SGLQTPVV+ G ATPSG +SVGG G+ETP+ +++LRK+RIEA+MEGG+TP+L YT+IPE++NERIG SMMGSTHTY+I KG P G +A VE+ALNPE++DLMD+E M +AEAALR +QASLAKEDLSDMVAEHAAKQ +KRKRQ +D+ K AKKYKEFKF Sbjct: 308 RPEQWAMEAILAQRQRMEEERKKTETEVEVEYIQDELDLDPSDPMYRTFNKIFQAFKIVEDPLEKIKEKEEEERKHAEEYKKVPKMLEEDDMLEEEEKDG--EDKVSKRKLKKLSRLSVAELKQLVSRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMREALQEKEDAKGMKSKQREKVRPKLGKIDIDYQKLHDAFFKWQTKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDDLRTALGMPVGPNAHKVPAPWLIAMQRYGPPPSYPNLKIAGLNAPIPDGCSFGYHAGLSHTRLNGVVIVISGDQSKLQKMVQMSWTFVNDSLCTTLCLQIVDEAGKPLYGDVFGTSDSRNFPTTPAEDIDQTLWGEMESESEEESDSDEEDEEEEEEG----VDSGLQTPVVEPGLATPSGTTSVGGA-GLETPD-MIELRKRRIEADMEGGDTPSLPYTIIPERKNERIGASMMGSTHTYEI-GKGRAPVK-GKEA-------AVEMALNPEDLDLMDSETMALKAEAALREQQASLAKEDLSDMVAEHAAKQKNKRKRQETREDKDK--AKKYKEFKF 896
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|478259352|gb|ENN79251.1| (hypothetical protein YQE_04287, partial [Dendroctonus ponderosae]) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 402/729 (55.14%), Postives = 496/729 (68.04%), Query Frame = 0 Query: 340 PPVASAYGASDDLEDEATPAGPQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTNVAIPKALEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTVTDPNPTPLVD------------DPELDERSDRGKRHKRKKKRKKNRPEEWARQAAE---AERKKKEEDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDADD---DDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 P S G S + E E + Q P L+SL V +P DEP V +P+ LEE LA K +RAM++G +R + + +AD ++P + D + DP+ ++ K+ ++K K+ + E+ +Q E +E+ + +D+ + V+IEYV EK+ L P YR F IF+ FKI +E + +PP L+ PKLL +D + D++D +D+ K+SKRK+KKL RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTV VPRHWCFKRKYLQGKRGIEKPPF+LPDFIK+TGIMEMRA+LQEK++SKT+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KP+MT+HGDLYYEGKEFE RLKEKKPGDL++ELRTALGMPVGPNA+KVPPPWLIAMQRYGPPPSYPNLKIPGLNA IP+ C+FGYHAGGWGKPPVDE GKPLYGDVFGT + D +D LWGELESESEEE EEE EEE+ E + + SG TP G ATPSG++S+ GMETPE ++LRKK+IE EMEG ETP LY +IPEKRN+RIG +MM STH YD+ + G+ + + P + G VELAL+P E+D MD++AM R E +R Q+ L KEDLSDM+AEH AKQ SKRKRQ + E K+ KKYKEFKF Sbjct: 49 PSDWSENGVSGNSEMELSSPEKQLP-SLLSLRV----------DPPNDEPPENVEVVLPQVLEEVLALKDQRAMELGTEELG-DREDQKNVADSSEPVWEKKGHSEQEQDLESNLESEFEESEIEHVKSRDPKEKVSKNKKKKKRKKNKKHRENEEKDRQQGLENGISEKDGELDDQLTEKDSVQIEYVQEKIGLHELAPQYRQFYTIFEQFKISDE----RQNIPPPMLANITALSSQPKLLSDDQNEDNEDSEDRKLEDKSKMSKRKLKKLTRLSVAELKQLVHRPDVVEMHDVTARDPKLLVQLKAHRNTVQVPRHWCFKRKYLQGKRGIEKPPFNLPDFIKRTGIMEMRASLQEKDESKTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPKMTIHGDLYYEGKEFETRLKEKKPGDLSEELRTALGMPVGPNANKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPDGCTFGYHAGGWGKPPVDENGKPLYGDVFGTNQSHIDDIGEDPSVDRTLWGELESESEEESEEEDEEEETETQPPD---ESGFVTPT--EGLATPSGITSIPA--GMETPE-AIELRKKKIENEMEGSETPVLYHIIPEKRNDRIGNAMMASTHVYDLASMGAAQNPVPIRRPNERE-GMVELALDPSELD-MDSDAMAVRYEQQIRENQSQLQKEDLSDMLAEHVAKQKSKRKRQ---QQESKT-TKKYKEFKF 747
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1080057716|ref|XP_018570665.1| (splicing factor 3B subunit 2 [Anoplophora glabripennis]) HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0 Identity = 402/701 (57.35%), Postives = 485/701 (69.19%), Query Frame = 0 Query: 367 LMSLNVHRPPPTYEGQEPSGDEPEPMTNVAIPKALEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKK------EEDEKPSEP--EVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEP-RDADD---DDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYID-----PGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 L+SL V P EG + V +P+ALEE LA K++RA+++G E +G ++ A + P D N ++D EL E S++ + + K KK + + ++ E E K+K EE E+ P +VEIEYV E + L P YR F IF++FKI +++ + PP +K ++ DDL+E DADD +D+ K+SKRKMKKL RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTV VPRHWCFKRKYLQGKRGIEKPPF+LPDFIKKTGIMEMRA+LQ+K++SKT+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KP+MT+HGDLYYEGKEFE RLKEKKPGDL++ELRTALGMPVGPNA+KVPPPWLIAMQRYGPPPSYPNLKIPGLNA IPE CSFGYHAGGWGKPPVDE GKPLYGDVFGT + D +D +LWGELESESEEE EEE +EE+++ + SGL TP G TPSGL+S+ GMETPE ++LRKK+IE EM+G ETP LY +IPEKRNERIG +MM S+H YD++N G G+ P I G VELAL+P E+D MD++AM R E +R Q+ L KEDLSDM+AEH AKQ SKRKRQ + KKYKEFKF Sbjct: 84 LLSLKVDPPEQLVEGGN---------SEVVLPQALEEVLALKNQRALELGT--------EIDGGSETAPVQKESEREPLWEKDDNVDTVID-TELVEDSNQKDKDSKVSKNKKKKKRKKNKKTRENEEKQKGTAKENEEIEELDTPKGDVEIEYVQESIGLHELAPQYRQFYSIFESFKISDQKADI---APPMLATPTSLSSKA--IMANDDLLEDIEDADDKKLEDKSKLSKRKMKKLTRLSVAELKQLVHRPDVVEMHDVTARDPKLLVQLKAHRNTVQVPRHWCFKRKYLQGKRGIEKPPFNLPDFIKKTGIMEMRASLQDKDESKTLKAKMRERTRPKLGKIDIDYQKLHDAFFKWQTKPKMTIHGDLYYEGKEFETRLKEKKPGDLSEELRTALGMPVGPNANKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCSFGYHAGGWGKPPVDENGKPLYGDVFGTNTSNIDDIGEDPNVDRSLWGELESESEEESEEEEDEEEKDSQNV--VDDSGLVTPA--EGLVTPSGLTSIPA--GMETPEA-IELRKKKIENEMDGAETPVLYHIIPEKRNERIGNAMMASSHVYDMSNVG------GAGPPPVISRRTDREGMVELALDPSELD-MDSDAMAVRYEQQMRENQSQLQKEDLSDMLAEHVAKQKSKRKRQQ----QDTKQTKKYKEFKF 743
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1130217500|ref|XP_019756464.1| (PREDICTED: splicing factor 3B subunit 2 [Dendroctonus ponderosae] >gi|546684003|gb|ERL93732.1| hypothetical protein D910_11018 [Dendroctonus ponderosae]) HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0 Identity = 399/738 (54.07%), Postives = 489/738 (66.26%), Query Frame = 0 Query: 340 PPVASAYGASDDLEDEATPAGPQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTNVAIPKALEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTV------------------------TDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKEEDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELNKVPKLLEEDDLIEPRDADD---DDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 P S G S + E E + Q P L+SL V +P DEP V +P+ LEE LA K +RAM++G +R + + +AD ++P + DP + + + ++ R +K R++ + + E + + E+D V+IEYV EK+ L P YR F IF+ FKI +E + +PP L+ PKLL +D + D++D +D+ K+SKRK+KKL RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTV VPRHWCFKRKYLQGKRGIEKPPF+LPDFIK+TGIMEMRA+LQEK++SKT+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KP+MT+HGDLYYEGKEFE RLKEKKPGDL++ELRTALGMPVGPNA+KVPPPWLIAMQRYGPPPSYPNLKIPGLNA IP+ C+FGYHAGGWGKPPVDE GKPLYGDVFGT + D +D LWGELESESEEE EEE EEE+ E + + SG TP G ATPSG++S+ GMETPE ++LRKK+IE EMEG ETP LY +IPEKRN+RIG +MM STH YD+ + G+ + + P + G VELAL+P E+D MD++AM R E +R Q+ L KEDLSDM+AEH AKQ SKRKRQ + E K+ KKYKEFKF Sbjct: 49 PSDWSENGVSGNSEMELSSPEKQLP-SLLSLRV----------DPPNDEPPENVEVVLPQVLEEVLALKDQRAMELGTEELG-DREDQKNVADSSEPVWEKKGHSVIIEQEQDLESNLESEFEESEIEHVKSRDPKEKVSKNKKKKKRKKNKKHRENEEKDRQQGLENGISEKDGELDDQLTEKDS------VQIEYVQEKIGLHELAPQYRQFYTIFEQFKISDE----RQNIPPPMLANITALSSQPKLLSDDQNEDNEDSEDRKLEDKSKMSKRKLKKLTRLSVAELKQLVHRPDVVEMHDVTARDPKLLVQLKAHRNTVQVPRHWCFKRKYLQGKRGIEKPPFNLPDFIKRTGIMEMRASLQEKDESKTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPKMTIHGDLYYEGKEFETRLKEKKPGDLSEELRTALGMPVGPNANKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPDGCTFGYHAGGWGKPPVDENGKPLYGDVFGTNQSHIDDIGEDPSVDRTLWGELESESEEESEEEDEEEETETQPPD---ESGFVTPT--EGLATPSGITSIPA--GMETPEA-IELRKKKIENEMEGSETPVLYHIIPEKRNDRIGNAMMASTHVYDLASMGAAQNPVPIRRPNERE-GMVELALDPSELD-MDSDAMAVRYEQQIRENQSQLQKEDLSDMLAEHVAKQKSKRKRQ---QQESKT-TKKYKEFKF 750
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1133415309|ref|XP_019880499.1| (PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 2 [Aethina tumida]) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 403/705 (57.16%), Postives = 490/705 (69.50%), Query Frame = 0 Query: 372 VHRPPPTYEGQEPS-----GDEPEPM----TNVAIPKALEEALAYKHERAMQVGVNPADIERVESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPEL--DERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKEE---------DEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQEDIKREELN-KVPKLLEEDDLIEPRDADD----DDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGA-VASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 V +PPP E Q PS D PE + + V +P+ LE+ LA K++RA+++G ++ +SE ++D + R P + DD EL D +++GK ++ + ++ R+ + ++ +E+ + +PSEP+VEIEYV E + L P YR F IF++FKI ++ +S++PP L+ KV D+ E + D DD+ K+SKRK+KKL RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTV VPRHWCFKRKYLQGKRGIEKPPF+LPDFIKKTGIMEMRA+LQ+K++SKT+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KP+MT+HGDLYYEGKEFE RLKEKKPGDL++ELRTALGMPVG NAHKVPPPWLIAMQRYGPPPSYPNLK+PGLNA IPE CSFGYHAGGWGKPPVDE GKPLYGDVFGT A D +D +LWGELESESEEE EEE EEE EEG G SGL TP G TPSGL+S+ GMETPE ++LRK++IE EMEGGETP LY +IPE+RNERIG SMMGS+H YD+T + P S +A + G VELAL+P E+D MD++AM R E +R Q+ L KEDLSDM+AEH AKQ SKRKR + KKYKEFKF Sbjct: 68 VMQPPPVNEKQLPSLLSLKVDPPEQLVEGNSEVVLPQVLEDVLALKNQRALELGTE--EVPDGDSEVVSDNNK-EREPLWEK------------DDNELVPDVENNKGKEKEKDAIKISKNKKKKKRKKNKKKQINEEKSEEKLKENVETQPSEPDVEIEYVQESISLHELAPQYRQFYSIFESFKISDQ----KSDLPPPMLATPTALSTKVINSALGDEFQEENEEGDEKKIDDKSKMSKRKLKKLTRLSVAELKQLVNRPDVVEMHDVTARDPKLLVQLKAHRNTVQVPRHWCFKRKYLQGKRGIEKPPFNLPDFIKKTGIMEMRASLQDKDESKTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPKMTIHGDLYYEGKEFETRLKEKKPGDLSEELRTALGMPVGANAHKVPPPWLIAMQRYGPPPSYPNLKVPGLNAPIPEGCSFGYHAGGWGKPPVDENGKPLYGDVFGTNVANIDDIGEDPNVDRSLWGELESESEEESEEEEEEEAGGEEGIAGMPDESGLVTPA--EGLVTPSGLTSIPA--GMETPEA-IELRKRKIENEMEGGETPVLYHIIPERRNERIGQSMMGSSHVYDMTTVANPPPSVSRRA--HDREGMVELALDPSELD-MDSDAMAVRYEQQMRENQSQLQKEDLSDMLAEHVAKQKSKRKRAQ----QDTKQQKKYKEFKF 741
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1035598798|ref|XP_016906796.1| (PREDICTED: splicing factor 3B subunit 2 [Apis cerana] >gi|1241837687|gb|PBC33928.1| Splicing factor 3B subunit [Apis cerana cerana]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 394/726 (54.27%), Postives = 494/726 (68.04%), Query Frame = 0 Query: 361 PQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTN--VAIPKALEEALAYKHERAMQVGVNPADIERV----ESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKE-EDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQ--------SEVPPQEDIKREEL--NKVPKLLEEDD----LIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGE----LESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITN--KGSQPSS--------TGSKAPGYIDP-GGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 P+A L+SL V PP + Q S D + V +P ALE+ALA+K ERA +VG +P DI + E + + P+T T+ ++D ++ + K+ K+KK++K N E E KK E+ KP E EIEYV E ++ +PMYR FA+IF+AFK+ E EP+ + PP ++ +KVP L + DD + + + ++ P++SKRK+K+L RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIK+TGI EMRA+LQE++D++T+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KPRMT+HGDLYYEGKEFE RLKEKKPG+L+DELRTALGMPVGPN HKVPPPWLIAMQRYGPPPSYPNLKIPGLNA IPE C+FGYHAGGWGKPPVDE G+PLYGDVFG + ++ EEID +WGE + +E+E+ E E E E ASGL TP + G TPSG++S+ GL ETPE ++LRKK+IE+EMEGG+TP LYTV+ E+R E +G SMMGSTH YD+T G P S +G+ + G + G VELAL+P E+DL D+EAM +R E +R++QA L +EDLSDM+ +H +Q SKRKRQ + + +KKYKEFKF Sbjct: 30 PKALPSLLSLKVS-PPSELQSQTSSDDAGRDTDSDSVKLPAALEQALAFKTERAKEVGGDPNDIVSLGKSPNHETLGEDISHLDDVILEPETTTE----------KIDVKTTKTKKKKKKKRKKHN-------VGKEIENKKDNVENAKPKEDLPEIEYVQEIPSVNDLEPMYRQFARIFEAFKLTEPEPKSAETEKGEPIGQYPPVTTLQATGTVPSKVPPLDDFDDEANQQQQQQGSGENGAPRLSKRKLKRLTRLSVAELKQLVGRPDVVEMHDVTARDPKLLVQLKAHRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKRTGITEMRASLQERDDTRTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGELSDELRTALGMPVGPNCHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCAFGYHAGGWGKPPVDETGRPLYGDVFGISRTPGGDNMD-EEIDRGMWGEPESESSGDEDEDEDAEEGGEGEGEGKDGDGDASGLVTPGAE-GLITPSGITSIPAGL--ETPET-IELRKKKIESEMEGGDTPALYTVLQERRTEGLGASMMGSTHVYDMTGAAGGQAPPSVIAARRGVSGTTSDGRTEKDGAVELALDPSELDL-DSEAMASRYEETMRSRQAHLRREDLSDMLQDHVQRQKSKRKRQ---QSQDSKASKKYKEFKF 728
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|820857305|ref|XP_003696704.2| (PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 2 [Apis florea]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 395/726 (54.41%), Postives = 494/726 (68.04%), Query Frame = 0 Query: 361 PQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTN--VAIPKALEEALAYKHERAMQVGVNPADIERV----ESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKE-EDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQ--------SEVPPQEDIKREEL--NKVPKLLEEDD----LIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGE----LESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITN--KGSQPSS--------TGSKAPGYIDP-GGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 P+A L+SL V PP + Q S D + V +P ALE+ALA+K ERA +VG +P DI + E I + P+T T+ ++D ++ + K+ K+KK++K N E E KK E+ KP E EIEYV E ++ +PMYR FA+IF+AFK+ E EP+ + PP ++ +KVP L + DD + + + ++ P++SKRK+K+L RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIK+TGI EMRA+LQE++D++T+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KPRMT+HGDLYYEGKEFE RLKEKKPG+L+DELRTALGMPVGPN HKVPPPWLIAMQRYGPPPSYPNLKIPGLNA IPE C+FGYHAGGWGKPPVDE G+PLYGDVFG + ++ EEID +WGE + +E+E+ E E E E ASGL TP + G TPSG++S+ GL ETPE ++LRKK+IE+EMEGG+TP LYTV+ E+R E +G SMMGSTH YD+T G P S +G+ + G + G VELAL+P E+DL D+EAM +R E +R++QA L +EDLSDM+ +H +Q SKRKRQ + + +KKYKEFKF Sbjct: 30 PKALPSLLSLKVS-PPSELQNQTSSDDAGRDTDSDSVKLPAALEQALAFKTERAKEVGGDPNDIVSLGKSPNHETIGEDISHLDDVILEPETTTE----------KIDVKTTKTKKXKKKKRKKHN-------VGKEIENKKDNVENAKPKEDLPEIEYVQEIPSVNDLEPMYRQFARIFEAFKLTEPEPKSAETEKGEPIGQYPPVTTLQATGTVPSKVPPLDDFDDEANQQQQQQGSGENGAPRLSKRKLKRLTRLSVAELKQLVGRPDVVEMHDVTARDPKLLVQLKAHRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKRTGITEMRASLQERDDTRTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGELSDELRTALGMPVGPNCHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCAFGYHAGGWGKPPVDETGRPLYGDVFGISRTPGGDNMD-EEIDRGMWGEPESESSGDEDEDEDAEEGGEGEGEGKDGDGDASGLVTPGAE-GLITPSGITSIPAGL--ETPET-IELRKKKIESEMEGGDTPALYTVLQERRTEGLGASMMGSTHVYDMTGAAGGQAPPSVIAARRGVSGTTSDGRTEKDGAVELALDPSELDL-DSEAMASRYEETMRSRQAHLRREDLSDMLQDHVQRQKSKRKRQ---QSQDSKASKKYKEFKF 728
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|110756801|ref|XP_001122081.1| (PREDICTED: splicing factor 3B subunit 2 [Apis mellifera]) HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0 Identity = 394/726 (54.27%), Postives = 494/726 (68.04%), Query Frame = 0 Query: 361 PQAPVPLMSLNVHRPPPTYEGQEPSGDEPEPMTN--VAIPKALEEALAYKHERAMQVGVNPADIERV----ESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKE-EDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQ--------SEVPPQEDIKREEL--NKVPKLLEEDD----LIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGE----LESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITN--KGSQPSS--------TGSKAPGYIDP-GGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 P+A L+SL V PP + Q S D + V +P ALE+ALA+K ERA +VG +P DI + E + + P+T T+ ++D ++ + K+ K+KK++K N E E KK E+ KP E EIEYV E ++ +PMYR FA+IF+AFK+ E EP+ + PP ++ +KVP L + DD + + + ++ P++SKRK+K+L RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIK+TGI EMRA+LQE++D++T+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KPRMT+HGDLYYEGKEFE RLKEKKPG+L+DELRTALGMPVGPN HKVPPPWLIAMQRYGPPPSYPNLKIPGLNA IPE C+FGYHAGGWGKPPVDE G+PLYGDVFG + ++ EEID +WGE + +E+E+ E E E E ASGL TP + G TPSG++S+ GL ETPE ++LRKK+IE+EMEGG+TP LYTV+ E+R E +G SMMGSTH YD+T G P S +G+ + G + G VELAL+P E+DL D+EAM +R E +R++QA L +EDLSDM+ +H +Q SKRKRQ + + +KKYKEFKF Sbjct: 30 PKALPSLLSLKVS-PPSELQSQTSSDDAGRDTDSDSVKLPAALEQALAFKTERAKEVGGDPNDIVSLGKSPNHETLGEDISHLDDVILEPETTTE----------KIDVKTTKTKKKKKKKRKKHN-------VGKEMENKKDNVENAKPKEDLPEIEYVQEIPSINDLEPMYRQFARIFEAFKLTEPEPKSAETEKGEPIGQYPPVTTLQATGTVPSKVPPLDDFDDEANQQQQQQGSGENGAPRLSKRKLKRLTRLSVAELKQLVGRPDVVEMHDVTARDPKLLVQLKAHRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKRTGITEMRASLQERDDTRTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGELSDELRTALGMPVGPNCHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCAFGYHAGGWGKPPVDETGRPLYGDVFGISRTPGGDNMD-EEIDRGMWGEPESESSGDEDEDEDAEEGGEGEGEGKDGDGDASGLVTPGAE-GLITPSGITSIPAGL--ETPET-IELRKKKIESEMEGGDTPALYTVLQERRTEGLGASMMGSTHVYDMTGAAGGQAPPSVIAARRGVSGTTSDGRTEKDGAVELALDPSELDL-DSEAMASRYEETMRSRQAHLRREDLSDMLQDHVQRQKSKRKRQ---QSQDSKASKKYKEFKF 728
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1022762715|gb|KZS08411.1| (putative Splicing factor 3B subunit 2 [Daphnia magna]) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 370/555 (66.67%), Postives = 440/555 (79.28%), Query Frame = 0 Query: 500 DEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEPEDQSEVPPQ--EDIKRE-ELNKVPKLLEEDDLIEPRDADDDDQPKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGELESESEEEEEEESEEEDEEEEGAEGAV-ASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITNKGSQPSSTGSKAPGYIDPGGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 D+ P+V+IEYV E++ D +P YR FAKIF+AFKI +E+ ++E +++R EL KVPK EE+DL E ++ DDD+PK+SKRK+K+L RLSVA+LKQ V RPDVVEMHDVTARDP+LLV LK+TRN+VPVPRHWC KRKYLQGKRGIEKPPF+LPDFIKKTGIMEMRAALQEKE+SKT+K KMRE+VRPK+G++DIDYQKLHDAFFKWQ+KP+MT+ GDLYYEGKEFE R+K+KKPG+L+DELRTALGMPVGP+++K+PPPWLIAMQRYGPPPSYPNLKIPGLNA IP+ SFGYHAGGWGKPPVDE G+PLYGDVFG + D + EE+D LWGELESE EEEE EESEEE+ E+ EGA+ SGL TP G ATPSG SSV GL ETP+ +++LRKK+IEAEME ETP LYTV+PEKR +RIG +MMGSTH YDI S S+ GGVEL+L+P E++ +D+E+M AR E LR +Q +LAKED SDMVAEHAAKQ SKRKRQ D + AKKYKEFKF Sbjct: 143 DDVDEYPQVDIEYVQEEITYDEKNPFYRQFAKIFEAFKIIDEKTAKKAEEEEAKKRELQRNLELKKVPKFAEEEDLEEKKENADDDKPKVSKRKLKQLTRLSVADLKQCVARPDVVEMHDVTARDPKLLVLLKATRNSVPVPRHWCAKRKYLQGKRGIEKPPFNLPDFIKKTGIMEMRAALQEKEESKTLKAKMRERVRPKMGRVDIDYQKLHDAFFKWQTKPKMTIMGDLYYEGKEFETRMKDKKPGELSDELRTALGMPVGPSSNKIPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPDGSSFGYHAGGWGKPPVDEFGRPLYGDVFGLTGSGGDTILLDEEVDRTLWGELESEEEEEEVEESEEEEGED--EEGAIDQSGLVTPA--EGLATPSGFSSVPAGL--ETPD-MIELRKKKIEAEMESTETPQLYTVLPEKRTDRIGQAMMGSTHVYDIAAATSTQKSS----------GGVELSLDPSELEGLDSESMAARYEQTLREQQGNLAKEDFSDMVAEHAAKQKSKRKRQQQQTDTKQ--AKKYKEFKF 678
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Match: gi|1059223753|ref|XP_017757460.1| (PREDICTED: splicing factor 3B subunit 2 [Eufriesea mexicana] >gi|1026568532|gb|OAD56926.1| Splicing factor 3B subunit 2 [Eufriesea mexicana]) HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0 Identity = 395/725 (54.48%), Postives = 491/725 (67.72%), Query Frame = 0 Query: 367 LMSLNVHRPPPTYEGQEPSGDEPEPMTN--VAIPKALEEALAYKHERAMQVGVNPADIERV----ESEGIADQAQPARLPTFRPQTVTDPNPTPLVDDPELDERSDRGKRHKRKKKRKKNRPEEWARQAAEAERKKKE-EDEKPSEPEVEIEYVPEKVELDMADPMYRTFAKIFDAFKIQEEEP--------EDQSEVPPQEDIKREEL--NKVPKLLEEDDLIEPRDADDDDQ---------PKISKRKMKKLNRLSVAELKQLVPRPDVVEMHDVTARDPRLLVHLKSTRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKKTGIMEMRAALQEKEDSKTMKTKMREKVRPKLGKIDIDYQKLHDAFFKWQSKPRMTMHGDLYYEGKEFEIRLKEKKPGDLTDELRTALGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAAIPESCSFGYHAGGWGKPPVDEAGKPLYGDVFGTADAAFDQSVPVEEIDTALWGE----LESESEEEEEEESEEEDEEEEGAEGAVASGLQTPVVDAGQATPSGLSSVGGGLGMETPEQLVDLRKKRIEAEMEGGETPNLYTVIPEKRNERIGTSMMGSTHTYDITN--KGSQPSS--------TGSKAPGYIDP-GGVELALNPEEVDLMDTEAMQARAEAALRAKQASLAKEDLSDMVAEHAAKQTSKRKRQAGGKDEGKSGAKKYKEFKF 1050 L+SL V PP + Q S D + + +P ALE+ALA+K ERA +VG +P DI + E I + P+T T+ ++D ++++ K+ K+KK++K N E E KK E+ KP E EIEY+ E ++ +PMYR FA+IF+AFK+ E EP E + PP ++ +KVP L + DD DA+ Q P++SKRK+K+L RLSVAELKQLV RPDVVEMHDVTARDP+LLV LK+ RNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIK+TGI EMRA+LQE++D++T+K KMRE+ RPKLGKIDIDYQKLHDAFFKWQ+KPRMT+HGDLYYEGKEFE RLKEKKPG+L+DELRTALGMPVGPN HKVPPPWLIAMQRYGPPPSYPNLKIPGLNA IPE C+FGYHAGGWGKPPVDE G+PLYGDVFG + ++ EEID +WGE + +E+E+ E E E E ASGL TP + G TPSG++S+ GL ETPE ++LRKK+IE+EMEGG+TP LYTV+ E+R E +G SMMGSTH YD+T G P S +G+ + G + G VELAL+P E+DL D+EAM +R E +R++QA L +EDLSDM+ +H +Q SKRKRQ + + +KKYKEFKF Sbjct: 31 LLSLKVS-PPSELQNQTSSDDTGRDTDSDSMKLPAALEQALAFKTERAKEVGGDPNDIVSLGKSPNHESIGEDISQLDDVILEPETTTE----------KIDMKTNKTKKKKKKKRKKHN-------IGKEIENKKDNVENAKPKEDLPEIEYIQEIPSVNDLEPMYRQFARIFEAFKLTEPEPKLTEAEKGEPIGQYPPVTTLQTTGTVPSKVPPLDDFDD-----DANQHQQQQGTGENGAPRLSKRKLKRLTRLSVAELKQLVGRPDVVEMHDVTARDPKLLVQLKAHRNTVPVPRHWCFKRKYLQGKRGIEKPPFDLPDFIKRTGITEMRASLQERDDTRTLKAKMRERARPKLGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGELSDELRTALGMPVGPNCHKVPPPWLIAMQRYGPPPSYPNLKIPGLNAPIPEGCAFGYHAGGWGKPPVDETGRPLYGDVFGISRTPGGDNMD-EEIDRGMWGEPESESSGDEDEDEDAEEGGEGEGEGKDGDGDASGLVTPGAE-GLITPSGITSIPAGL--ETPET-IELRKKKIESEMEGGDTPALYTVLQERRTEGLGASMMGSTHVYDMTGAAGGQAPPSVIAARRGVSGTTSDGRTEKDGAVELALDPSELDL-DSEAMASRYEETMRSRQAHLRREDLSDMLQDHVQRQKSKRKRQ---QSQDSKASKKYKEFKF 723 The following BLAST results are available for this feature:
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of low quality protein: splicing factor 3b subunit 2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold367_size194084:7367..10753- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold367_size194084-snap-gene-0.41 ID=maker-scaffold367_size194084-snap-gene-0.41|Name=low quality protein: splicing factor 3b subunit 2-like|organism=Tigriopus kingsejongensis|type=gene|length=3387bp|location=Sequence derived from alignment at scaffold367_size194084:7367..10753- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'low quality protein: splicing factor 3b subunit 2-like' has the following synonyms
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