achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity, maker-scaffold375_size191602-snap-gene-0.38 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Match: EMLSAG00000004676 (supercontig:LSalAtl2s:LSalAtl2s244:183507:188860:-1 gene:EMLSAG00000004676 transcript:EMLSAT00000004676 description:"maker-LSalAtl2s244-augustus-gene-1.13") HSP 1 Score: 100.908 bits (250), Expect = 1.350e-25 Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYS-ELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQ-QGTALANDLKKQYKVTGMPSVIVVTK-DGQLITRSGRSEITENGPKIFQNW 158 M+ L G KL + L KK ++ FSA WCPP R F PIL Y+ L K+ EV+FVS D +EEM +YMK+ HG W++I + + L L + +V G+P+++VV DG +++R RSEIT G F W Sbjct: 108 MEILNGVKLVNAERRETVANNYLKGKKYAVFYFSAHWCPPCRQFTPILAQAYAGALGKKG---EVIFVSSDRTEEEMYSYMKEAHGGWMSIDYKNSTLRGLLGSRLEVNGIPALVVVNLFDGSVMSRDARSEITSKGSAAFSIW 248
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Match: EMLSAG00000012306 (supercontig:LSalAtl2s:LSalAtl2s899:239151:239766:1 gene:EMLSAG00000012306 transcript:EMLSAT00000012306 description:"maker-LSalAtl2s899-augustus-gene-2.33") HSP 1 Score: 50.447 bits (119), Expect = 2.194e-9 Identity = 23/52 (44.23%), Postives = 29/52 (55.77%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFY 69 MD L +L G +++ L II + FSA WCPP RAF P+L DFY Sbjct: 1 MDLLANVQLIKADGSEHSADSILXXAXIICFYFSAHWCPPCRAFTPVLKDFY 52
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81905245|sp|Q9D531.1|NXNL2_MOUSE (RecName: Full=Nucleoredoxin-like protein 2; AltName: Full=Rod-derived cone viability factor 2; Short=RdCVF2) HSP 1 Score: 138.272 bits (347), Expect = 3.561e-41 Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEE---PLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162 +D L G++L TR G VV +E AL +K + LY F+A C PSR F P+L DFY+EL E P EVVFVS D + EEM +M++ HG WLA+ ++LKK+Y++T +P ++V+ ++G +IT GR +I E G FQNW+ AA Sbjct: 2 VDVLGGRRLVTREGTVVEAEVALQNKVVALY-FAAGRCSPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADGSAEEMLDFMRELHGSWLALPFHDPYRHELKKRYEITAIPKLVVIKQNGAVITNKGRKQIRERGLACFQNWVEAA 148
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|74747736|sp|Q5VZ03.1|NXNL2_HUMAN (RecName: Full=Nucleoredoxin-like protein 2; AltName: Full=Rod-derived cone viability factor 2; Short=RdCVF2) HSP 1 Score: 125.176 bits (313), Expect = 4.628e-36 Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEE---PLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162 +D L + L T G V +E AL +K + LY F+A C PSR F P+L DFY+ L E P EVVFVS D + +EM +M++ HG WLA+ ++L+K+Y VT +P +++V ++G++IT GR +I E G FQ+W+ AA Sbjct: 2 VDILGERHLVTCKGATVEAEAALQNKVVALY-FAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPYRHELRKRYNVTAIPKLVIVKQNGEVITNKGRKQIRERGLACFQDWVEAA 148
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|74731355|sp|Q96CM4.1|NXNL1_HUMAN (RecName: Full=Nucleoredoxin-like protein 1; AltName: Full=Thioredoxin-like protein 6) HSP 1 Score: 89.7373 bits (221), Expect = 1.132e-21 Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 0 Query: 42 DKKIILYLFSAKWCPPSRAFLPILVDFYSELSKE-----EEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAKA 164 + +++L F A CP +AF+PIL DF+ L+ E L +V+VS D +E+ ++KD WL + L DL +Q+ V +P+V+V+ DG ++TR G EI G F NW AA+ Sbjct: 31 ENRLVLLFFGAGACPQCQAFVPILKDFFVRLTDEFYVLRAAQLALVYVSQDSTEEQQDLFLKDMPKKWLFLPFEDDLRRDLGRQFSVERLPAVVVLKPDGDVLTRDGADEIQRLGTACFANWQEAAEV 158
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75327654|sp|Q7Y0F2.1|NRX12_ORYSJ (RecName: Full=Probable nucleoredoxin 1-2; Short=OsNrx1-2) HSP 1 Score: 90.5077 bits (223), Expect = 1.391e-20 Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0 Query: 26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155 + + G VP +G K +L FSAKWCPP RAFLP LV+ Y+++ ++ E+VF+S D Q + WLA+ G L K +K+TG+PS++ + DG+ +T+ ++ + +G F Sbjct: 351 VLGKDGAKVPVSELVG--KTVLLYFSAKWCPPCRAFLPKLVNEYNKIKEKHNDFEIVFISSDREQSSYDEFFSGMP--WLALPLGDERKQQLSKIFKITGIPSLVAIGPDGKTVTKDAKTPLVAHGADAF 476 HSP 2 Score: 77.411 bits (189), Expect = 4.740e-16 Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 0 Query: 45 IILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI--QQGTALANDLKKQYKVTGMPSVIVV-TKDGQLITRSGRSEITENGPKIF 155 + LY FSA WCPP R F P L++ Y+EL + + EVVFVSGD +Q+ Y WLA+ ALA L ++YKV G+P ++++ K G++ T G + E G + + Sbjct: 44 VALY-FSASWCPPCRRFTPKLIEAYNELVSQGKSFEVVFVSGDSDQDAFNAYFAKMP--WLAVPFSDSEALAK-LNERYKVMGIPHLVILDAKSGEIYTEDGVELVHEYGTEAY 153 HSP 3 Score: 56.225 bits (134), Expect = 1.256e-8 Identity = 38/138 (27.54%), Postives = 62/138 (44.93%), Query Frame = 0 Query: 26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163 L T G VP G K + F P F +L Y +L E EVV VS D ++E D WLAI QG + L + ++++G+P ++++ DG+ + I E+GP ++ + +A+ Sbjct: 188 LITNKGDKVPISDLEG--KYVGLCFVVNGYGPVVQFTSVLAKIYEKLKAVGEKFEVVMVSLDGDEESFNESFADMP--WLAIPQGDKMCEKLARYFELSGLPMLVLIGPDGKTLNDDIADIIDEHGPDAWEGFPFSAE 321
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75327653|sp|Q7Y0E8.1|NRX11_ORYSJ (RecName: Full=Probable nucleoredoxin 1-1; Short=OsNrx1-1) HSP 1 Score: 89.3521 bits (220), Expect = 3.808e-20 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 0 Query: 10 EADLHIAPMDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155 E+ L I +D + G + G VP +G K +L FSAKWC P RAFLP LVD Y+++ ++ E++F+S D +Q + WLA+ G L K ++V G+PS++ + DG+ + R ++ +T +G F Sbjct: 333 ESLLVIGDLDFVLG-----KDGAKVPVSELVG--KTVLLYFSAKWCGPCRAFLPKLVDEYNKIKEKHNDFEIIFISSDRDQSSYDEFFSGMP--WLALPLGDERKQHLSKTFRVRGIPSLVAIGADGRTVARDAKTPLTAHGADAF 469 HSP 2 Score: 74.7146 bits (182), Expect = 4.408e-15 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 0 Query: 45 IILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQ-QGTALANDLKKQYKVTGMPSVIVVTK-DGQLITRSGRSEITENGPKIF 155 + LY FSA WCPP R F P L++ Y+EL + + EVVFVSGD +QE Y WLA+ + L K++KV G+P ++++ G++ T G +T +G + + Sbjct: 37 VALY-FSASWCPPCRRFTPKLIEAYNELVSQGKNFEVVFVSGDKDQEAFDAYFAKMP--WLAVPFSDSECRAKLNKRFKVRGIPHLVILNATSGEVYTEDGVELVTVHGTEAY 146
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81879196|sp|Q8VC33.1|NXNL1_MOUSE (RecName: Full=Nucleoredoxin-like protein 1; AltName: Full=Rod-derived cone viability factor; Short=RdCVF; AltName: Full=Thioredoxin-like protein 6) HSP 1 Score: 82.4185 bits (202), Expect = 7.809e-19 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 0 Query: 42 DKKIILYLFSAKWCPPSRAFLPILVDFYSELSKE-----EEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163 + +++L F A CP +AF P+L DF+ L+ E L +V+VS D +E+ +++D WL + L DL +Q+ V +P+V+V+ G ++T EI GP F NW AA+ Sbjct: 31 ENRLVLLFFGAGACPQCQAFAPVLKDFFVRLTDEFYVLRAAQLALVYVSQDPTEEQQDLFLRDMPEKWLFLPFHDELRRDLGRQFSVRQLPAVVVLKPGGDVLTSDATEEIQRLGPACFANWQEAAE 157
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|75318691|sp|O80763.1|NRX1_ARATH (RecName: Full=Probable nucleoredoxin 1; Short=AtNrx1) HSP 1 Score: 82.4185 bits (202), Expect = 8.913e-18 Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 0 Query: 44 KIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155 K IL FSA WCPP RAF P LV+ Y ++ + E E++F+S D +QE Y WLA+ G L K +KV G+P + + GQ +T+ R + +G + Sbjct: 364 KTILMYFSAHWCPPCRAFTPKLVEVYKQIKERNEAFELIFISSDRDQESFDEYYS--QMPWLALPFGDPRKASLAKTFKVGGIPMLAALGPTGQTVTKEARDLVVAHGADAY 473 HSP 2 Score: 72.7886 bits (177), Expect = 2.005e-14 Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 26 LFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALAND-LKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIF 155 L G V ++ LG KKI LY FSA WC P + F P LV+ Y+ELS + E+VFVSGD+++E Y + WLA+ + D L + +KV G+P++++V G+L+ +G I G + Sbjct: 28 LVRNDGEQVKVDSLLG-KKIGLY-FSAAWCGPCQRFTPQLVEVYNELSS-KVGFEIVFVSGDEDEESFGDYFRKMP--WLAVPFTDSETRDRLDELFKVRGIPNLVMVDDHGKLVNENGVGVIRSYGADAY 153
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|81908524|sp|P97346.1|NXN_MOUSE (RecName: Full=Nucleoredoxin; AltName: Full=Protein Red-1) HSP 1 Score: 76.2554 bits (186), Expect = 1.069e-15 Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 50 FSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI-QQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITEN 150 FSA WCPP R+ +LV+ Y ++ + + E++FVS D ++E K Y + WLA+ A + L + Y + G+P++IV+ G++ITR GR E+ + Sbjct: 200 FSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEM--PWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLND 299
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|82192783|sp|Q503L9.1|NXN_DANRE (RecName: Full=Nucleoredoxin) HSP 1 Score: 75.8702 bits (185), Expect = 1.563e-15 Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 0 Query: 38 TALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQG-TALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEI 147 TAL + +Y FSA WCPP R+ +LV+ Y ++ + + E+VFVS D ++E Y + WLA+ A + L + Y + G+P++I++ +G +ITR GR EI Sbjct: 172 TALEGSYVGVY-FSAHWCPPCRSLTRVLVESYRKVKETGQKFEIVFVSADRSEESFTQYFSEM--PWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTEGHMITRQGRVEI 279
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Match: gi|187470901|sp|A6QLU8.1|NXN_BOVIN (RecName: Full=Nucleoredoxin) HSP 1 Score: 75.0998 bits (183), Expect = 3.400e-15 Identity = 35/102 (34.31%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 50 FSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAI-QQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITEN 150 FSA WCPP R+ +LV+ Y ++ + + E++FVS D +++ K Y + WLA+ A + L + Y + G+P++IV+ G++ITR GR E+ + Sbjct: 200 FSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEDSFKQYFSEMP--WLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLND 299
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325269561|ref|XP_023349779.1| (nucleoredoxin-like protein 2 [Eurytemora affinis]) HSP 1 Score: 186.037 bits (471), Expect = 1.500e-57 Identity = 78/146 (53.42%), Postives = 112/146 (76.71%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAAK 163 MD L GQ+L + G VV +++AL DKKII + FSA WCPP R F P L +FY++L EP E++F+S D++ EE+ TYMK+ HGDWLA+Q GT L+ DLKK+++V+G+P++I++ +D LIT++GRSE+TE GP +FQ WL+A+K Sbjct: 1 MDCLTGQQLLKKDGTVVSADSALADKKIIGFYFSAHWCPPCRLFTPALAEFYTDLVSNGEPFEIIFISSDNSPEELMTYMKESHGDWLAVQHGTVLSQDLKKKFQVSGIPTLIILNRDNDLITKTGRSEVTEKGPLVFQKWLAASK 146
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|669193549|gb|AII16480.1| (nucleoredoxin, partial [Paracyclopina nana]) HSP 1 Score: 158.688 bits (400), Expect = 7.727e-47 Identity = 67/141 (47.52%), Postives = 101/141 (71.63%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158 M+H+ G+ L G VP+++AL K ++L FSA WCPP RAF P+L DFY E+ + E +E+VFVS D +Q +M++YMK+ HGDWLA++ G+ALA++LK ++ VTG+P +IV+ DG LIT+ GR+ ++ GP ++W Sbjct: 1 MEHIAGKNLVRADGSSVPADSALAGKSVVLIYFSAHWCPPCRAFTPVLKDFYEEV--QGEGVEIVFVSSDRSQADMQSYMKESHGDWLAVEHGSALASELKSKFGVTGIPCLIVLKADGTLITKDGRNAVSSKGPAAVKDW 139
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926650619|ref|XP_013791809.1| (nucleoredoxin-like protein 2 isoform X2 [Limulus polyphemus]) HSP 1 Score: 149.828 bits (377), Expect = 2.570e-43 Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158 M+ L+G L + G V ++ AL +K II + FSA WCPP R F P+L D YSEL E P E++FVS D + ++M YM + HGDWLAI + ++++K +Y +TG+P++++V KDG LI+++GR E+ GP+ FQNW Sbjct: 1 MEFLQGGTLVKKNGCEVSADEALKNKDIIGFYFSAHWCPPCRGFTPVLADMYSELVDEGAPFEIIFVSSDRSADDMFQYMMESHGDWLAIPFQSGASSNVKAKYNITGIPALVIVKKDGTLISKNGRGEVQSLGPRAFQNW 141
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926612027|ref|XP_013794255.1| (nucleoredoxin-like protein 2 [Limulus polyphemus]) HSP 1 Score: 149.443 bits (376), Expect = 2.835e-43 Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWL 159 MD ++GQKLF + V ++ L DK+II + FSA WCPP RAF PIL + Y EL E P EVVFVS D ++++M +YM++ HGDWLA+Q ++ L +++ V G+P+ I++ KDG +IT SG E+TE G + F+ WL Sbjct: 1 MDIIQGQKLFKKDKSEVDADEILQDKEIIGFYFSAHWCPPCRAFTPILTELYGELRNENAPFEVVFVSSDQSEDDMFSYMEESHGDWLAVQFDGDVSTKLSEKFAVDGIPTFIILKKDGTVITESGVEEVTEKGAEAFKEWL 142
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|926650617|ref|XP_013791808.1| (nucleoredoxin-like protein 2 isoform X1 [Limulus polyphemus]) HSP 1 Score: 149.828 bits (377), Expect = 3.973e-43 Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158 M+ L+G L + G V ++ AL +K II + FSA WCPP R F P+L D YSEL E P E++FVS D + ++M YM + HGDWLAI + ++++K +Y +TG+P++++V KDG LI+++GR E+ GP+ FQNW Sbjct: 22 MEFLQGGTLVKKNGCEVSADEALKNKDIIGFYFSAHWCPPCRGFTPVLADMYSELVDEGAPFEIIFVSSDRSADDMFQYMMESHGDWLAIPFQSGASSNVKAKYNITGIPALVIVKKDGTLISKNGRGEVQSLGPRAFQNW 162
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318111|ref|XP_023340804.1| (nucleoredoxin-like protein 2 isoform X1 [Eurytemora affinis]) HSP 1 Score: 145.976 bits (367), Expect = 7.756e-42 Identity = 67/144 (46.53%), Postives = 98/144 (68.06%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNWLS 160 MD L GQ+L G V ++ AL DK+++LY FSA WCPP R F P+L DFY E+S +E +E+VFVS D ++E+M +YMK+ HGDWLA + + L N LK++Y V+G+P+++V KDG +IT+ GR + P + ++W S Sbjct: 1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPMLKDFYEEVS--DEGVEIVFVSSDRSKEDMLSYMKESHGDWLATEHNSNLTNSLKQKYGVSGIPTLVVCKKDGTVITKDGRGHVMSKQPAQAVKDWKS 142
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|394985942|pdb|2LUS|A (Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin Related Protein 16 And Its Role In Regulating Transcription Factor Nf-kb Activity >gi|94483085|gb|ABF22607.1| 16 kDa thioredoxion [Carcinoscorpius rotundicauda]) HSP 1 Score: 145.976 bits (367), Expect = 7.911e-42 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNW 158 M+ ++G KL + V + AL DK II + FSA WCPP R F PIL D YSEL + P E++FVS D ++++M YM + HGDWLAI + A+++ +Y +TG+P++++V KDG LI+ +GR E+ GP+ FQNW Sbjct: 1 MEFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQSLGPRAFQNW 141
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|241640786|ref|XP_002410928.1| (16 kDa thioredoxion, putative [Ixodes scapularis] >gi|215503626|gb|EEC13120.1| 16 kDa thioredoxion, putative [Ixodes scapularis]) HSP 1 Score: 145.976 bits (367), Expect = 7.964e-42 Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGPKIFQNWLSAA 162 M+ KG+ L + G VP+E L KK++ FSA WCPP R F PIL + Y E + +EP E+VFVS D EM YMK+ HG+W ++ G L +LK+++ ++G+P+++VV + G +IT GRS+I+ GP+ F WL AA Sbjct: 1 MELFKGKTLVKKDGSEVPAEQVLSGKKVVGLYFSAHWCPPCRMFTPILAEAYEEAQEGDEPFEIVFVSSDRAASEMLNYMKESHGNWCGLKHGDPLVQELKQRFGISGIPTLVVVNESGLVITSDGRSDISSEGPRAFAKWLEAA 145
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318113|ref|XP_023340805.1| (nucleoredoxin-like protein 2 isoform X2 [Eurytemora affinis]) HSP 1 Score: 145.591 bits (366), Expect = 9.543e-42 Identity = 66/142 (46.48%), Postives = 97/142 (68.31%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNW 158 MD L GQ+L G V ++ AL DK+++LY FSA WCPP R F P+L DFY E+S +E +E+VFVS D ++E+M +YMK+ HGDWLAI+ + L N L ++Y+V G+P+++V KDG +IT+ GR + P + ++W Sbjct: 1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPMLKDFYEEVS--DEGVEIVFVSSDRSKEDMLSYMKESHGDWLAIEHNSNLTNSLNEKYEVDGIPTLVVCKKDGTVITKDGRDHVMSKQPAQAVKDW 140
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Match: gi|1325318115|ref|XP_023340806.1| (nucleoredoxin-like protein 2 isoform X3 [Eurytemora affinis]) HSP 1 Score: 145.206 bits (365), Expect = 1.324e-41 Identity = 66/142 (46.48%), Postives = 96/142 (67.61%), Query Frame = 0 Query: 18 MDHLKGQKLFTRTGGVVPSETALGDKKIILYLFSAKWCPPSRAFLPILVDFYSELSKEEEPLEVVFVSGDDNQEEMKTYMKDHHGDWLAIQQGTALANDLKKQYKVTGMPSVIVVTKDGQLITRSGRSEITENGP-KIFQNW 158 MD L GQ+L G V ++ AL DK+++LY FSA WCPP R F P L DFY E+S +E +E+VFVS D++ E+M +YMK+ HGDWLAI+ + L N L ++Y+V G+P+++V KDG +IT+ GR + P + ++W Sbjct: 1 MDSLAGQQLVKADGTSVNADEALADKELVLYYFSAHWCPPCRQFTPKLKDFYEEVS--DEGVEIVFVSSDESNEDMLSYMKESHGDWLAIEHNSNLTNSLNEKYEVDGIPTLVVCKKDGTVITKDGRDHVMSKQPAQAVKDW 140 The following BLAST results are available for this feature:
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 18
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BLAST of achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold375_size191602:119201..121940- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold375_size191602-snap-gene-0.38 ID=maker-scaffold375_size191602-snap-gene-0.38|Name=achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity|organism=Tigriopus kingsejongensis|type=gene|length=2740bp|location=Sequence derived from alignment at scaffold375_size191602:119201..121940- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'achain nmr structure of carcinoscorpius rotundicauda thioredoxin related protein 16 and its role in regulating transcription factor nf-kb activity' has the following synonyms
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