chromobox protein homolog 1, maker-scaffold382_size189932-snap-gene-0.29 (gene) Tigriopus kingsejongensis

Overview
Namechromobox protein homolog 1
Unique Namemaker-scaffold382_size189932-snap-gene-0.29
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Match: EMLSAG00000002376 (supercontig:LSalAtl2s:LSalAtl2s1452:27623:28132:1 gene:EMLSAG00000002376 transcript:EMLSAT00000002376 description:"augustus_masked-LSalAtl2s1452-processed-gene-0.8")

HSP 1 Score: 152.91 bits (385), Expect = 4.964e-49
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0 
Query:   35 PPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            P   HPEEDSR RGFDRGLQAERIIGATD+SGELMFL+KWKGSDEADLVPARQAN+KC  VVIQFYEERLSWH+SSQDE+E
Sbjct:   89 PNAVHPEEDSRPRGFDRGLQAERIIGATDTSGELMFLIKWKGSDEADLVPARQANVKCSNVVIQFYEERLSWHSSSQDEDE 169
[Close]
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Match: EMLSAG00000007020 (supercontig:LSalAtl2s:LSalAtl2s399:436338:443827:-1 gene:EMLSAG00000007020 transcript:EMLSAT00000007020 description:"augustus_masked-LSalAtl2s399-processed-gene-4.2")

HSP 1 Score: 94.7449 bits (234), Expect = 1.528e-26
Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:    6 VPAFEDSLKA---KKDVAKKRKSDTASPATTVPP----------KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVI 97
             P FE   KA   KKD      +   SP     P            +PE+DS  RGFDR LQAER+IGAT +SGEL+ ++KWKGSDE D VPAR AN+KCP +VI
Sbjct:   34 CPKFEKKFKANIEKKDA--NGSTSIGSPNYNASPASKKEAKKLKALNPEKDSEPRGFDRILQAERLIGATGTSGELILIIKWKGSDEMDPVPARXANLKCPNLVI 136
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|1170338|sp|P45973.1|CBX5_HUMAN (RecName: Full=Chromobox protein homolog 5; AltName: Full=Antigen p25; AltName: Full=Heterochromatin protein 1 homolog alpha; Short=HP1 alpha)

HSP 1 Score: 117.857 bits (294), Expect = 1.980e-33
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 0 
Query:   17 KDVAKKRKSDTASPATTVPPKRHPEEDSR-SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            K  + KRKS+ ++ A  +  K+  E+ +  +RGF+RGL+ E+IIGATDS G+LMFL+KWK +DEADLV A++AN+KCPQ+VI FYEERL+WH   +D E
Sbjct:   84 KSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAE 182
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|73619718|sp|Q5R6X7.1|CBX3_PONAB (RecName: Full=Chromobox protein homolog 3; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma >gi|116241284|sp|Q13185.4|CBX3_HUMAN RecName: Full=Chromobox protein homolog 3; AltName: Full=HECH; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=Modifier 2 protein)

HSP 1 Score: 116.701 bits (291), Expect = 3.606e-33
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   45 RSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDE 113
            + RGF RGL  ERIIGATDSSGELMFL+KWK SDEADLV A++ANMKCPQ+VI FYEERL+WH+  +DE
Sbjct:  113 KPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|21903394|sp|P23198.2|CBX3_MOUSE (RecName: Full=Chromobox protein homolog 3; AltName: Full=Heterochromatin protein 1 homolog gamma; Short=HP1 gamma; AltName: Full=M32; AltName: Full=Modifier 2 protein)

HSP 1 Score: 116.701 bits (291), Expect = 3.933e-33
Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0 
Query:   45 RSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDE 113
            + RGF RGL  ERIIGATDSSGELMFL+KWK SDEADLV A++ANMKCPQ+VI FYEERL+WH+  +DE
Sbjct:  113 KPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|2493705|sp|Q61686.1|CBX5_MOUSE (RecName: Full=Chromobox protein homolog 5; AltName: Full=Heterochromatin protein 1 homolog alpha; Short=HP1 alpha)

HSP 1 Score: 116.701 bits (291), Expect = 5.614e-33
Identity = 55/99 (55.56%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   17 KDVAKKRKSDTASPATTVPPKRHPEEDSR-SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            K    KRKS  ++ A  +  K+  E+ +  +RGF+RGL+ E+IIGATDS G+LMFL+KWK +DEADLV A++AN+KCPQ+VI FYEERL+WH   +D E
Sbjct:   84 KSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAE 182
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|48428808|sp|P83916.1|CBX1_HUMAN (RecName: Full=Chromobox protein homolog 1; AltName: Full=HP1Hsbeta; AltName: Full=Heterochromatin protein 1 homolog beta; Short=HP1 beta; AltName: Full=Heterochromatin protein p25; AltName: Full=M31; AltName: Full=Modifier 1 protein; AltName: Full=p25beta >gi|48428809|sp|P83917.1|CBX1_MOUSE RecName: Full=Chromobox protein homolog 1; AltName: Full=Heterochromatin protein 1 homolog beta; Short=HP1 beta; AltName: Full=Heterochromatin protein p25; AltName: Full=M31; AltName: Full=Modifier 1 protein)

HSP 1 Score: 116.316 bits (290), Expect = 6.272e-33
Identity = 51/62 (82.26%), Postives = 58/62 (93.55%), Query Frame = 0 
Query:   47 RGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHT 108
            RGF RGL+ ERIIGATDSSGELMFL+KWK SDEADLVPA++AN+KCPQVVI FYEERL+WH+
Sbjct:  111 RGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHS 172
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|123479|sp|P29227.1|HP1_DROVI (RecName: Full=Heterochromatin protein 1; Short=HP1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.582e-25
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0 
Query:   12 SLKAKKDVAKKRKSDTASPATTVPPKRHPEEDSR------SRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQD 112
            S  A      KRKS+  +       KR   ED+         GFDRGL+AE+I+GA+D++G L FL+++KG D+A++VP+  AN+K PQ+VI+FYEERLSW++ ++D
Sbjct:  107 STTASNSSGSKRKSEEPAGPAGSKSKRVESEDTGDIVPAGGTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSTVANVKIPQMVIRFYEERLSWYSDNED 213
[Close]
BLAST of chromobox protein homolog 1 vs. SwissProt
Match: gi|1170337|sp|P05205.2|HP1_DROME (RecName: Full=Heterochromatin protein 1; Short=HP1; AltName: Full=Non-histone chromosomal protein C1A9 antigen)

HSP 1 Score: 94.3597 bits (233), Expect = 3.586e-24
Identity = 39/69 (56.52%), Postives = 58/69 (84.06%), Query Frame = 0 
Query:   44 SRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQD 112
            S S GFDRGL+AE+I+GA+D++G L FL+++KG D+A++VP+  AN K P++VI FYEERLSW++ ++D
Sbjct:  138 SGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYSDNED 206
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|961375222|gb|ALS04355.1| (chromobox protein homolog 3 isoform x2 [Acartia pacifica])

HSP 1 Score: 156.762 bits (395), Expect = 1.069e-46
Identity = 82/111 (73.87%), Postives = 92/111 (82.88%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKR-HPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  FEDS + K D AK R S   + A   P KR HP+ED+R RGF+RGLQ ERIIGATDSSGELMFL+KWKGSDEADLVPARQAN+KCPQVVIQFYEERLSWHTSSQDE++
Sbjct:   51 IKQFEDS-RRKGDKAK-RSSSKNTVAEEPPAKRKHPDEDARPRGFERGLQPERIIGATDSSGELMFLIKWKGSDEADLVPARQANIKCPQVVIQFYEERLSWHTSSQDEDD 159
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|290462379|gb|ADD24237.1| (Chromobox protein homolog 1 [Lepeophtheirus salmonis])

HSP 1 Score: 152.91 bits (385), Expect = 4.402e-45
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0 
Query:   35 PPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            P   HPEEDSR RGFDRGLQAERIIGATD+SGELMFL+KWKGSDEADLVPARQAN+KC  VVIQFYEERLSWH+SSQDE+E
Sbjct:   89 PNAVHPEEDSRPRGFDRGLQAERIIGATDTSGELMFLIKWKGSDEADLVPARQANVKCSNVVIQFYEERLSWHSSSQDEDE 169
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1325288822|ref|XP_023329178.1| (chromobox protein homolog 1-like [Eurytemora affinis])

HSP 1 Score: 150.984 bits (380), Expect = 2.251e-44
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 0 
Query:    6 VPAFEDSLKAKK-DVAKKRKSDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  FED LK KK + +K  K         +  K+HPEE+++ RGFDRGLQ ERIIGATDSSGELMFL+KWKG+DEADLVPARQAN KCPQVVIQFYEERLSWHTSS DE++
Sbjct:   53 IKGFEDKLKQKKIEGSKGGKRKGGEEGGPLAKKKHPEEEAKPRGFDRGLQPERIIGATDSSGELMFLIKWKGNDEADLVPARQANAKCPQVVIQFYEERLSWHTSSLDEDD 163
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|646717219|gb|KDR20165.1| (Chromobox protein-like protein 5, partial [Zootermopsis nevadensis])

HSP 1 Score: 145.591 bits (366), Expect = 3.980e-42
Identity = 73/116 (62.93%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKK--RKSDTASPATTVPP----KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  +E++ K K++ AKK  RK    +P     P    K+H EED++ RGFDRGL+ E+IIGATDSSGELMFL+KWKG+DEADLVPARQAN +CPQ+VIQFYEERL+WHTSS DE+E
Sbjct:   50 ISEYEENRK-KREAAKKDERKRKPGTPIDDKKPNANKKKHVEEDNKPRGFDRGLEPEKIIGATDSSGELMFLMKWKGTDEADLVPARQANGRCPQIVIQFYEERLTWHTSSHDEDE 164
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|926618146|ref|XP_013774270.1| (chromobox protein homolog 1-like isoform X2 [Limulus polyphemus])

HSP 1 Score: 145.206 bits (365), Expect = 6.875e-42
Identity = 69/113 (61.06%), Postives = 92/113 (81.42%), Query Frame = 0 
Query:    6 VPAFEDSLK---AKKDVAKKRKSDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  +E+S K   A++   KK+K+++ S  +T   KR  E+DS+ +GFDRGL+ +RIIGATDSSGELMFL+KWKGSD+ADLVPA+QAN+KCPQVVI+FYEERL+WHTS+  EE+
Sbjct:   60 IAEYENSRKNTDAEQSDGKKKKNESDSDNSTQKKKRKTEDDSKPKGFDRGLEPDRIIGATDSSGELMFLIKWKGSDDADLVPAKQANVKCPQVVIKFYEERLTWHTSTNHEED 172
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1227974133|ref|XP_021918524.1| (chromobox protein homolog 1-like isoform X5 [Zootermopsis nevadensis])

HSP 1 Score: 145.591 bits (366), Expect = 7.560e-42
Identity = 73/116 (62.93%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKK--RKSDTASPATTVPP----KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  +E++ K K++ AKK  RK    +P     P    K+H EED++ RGFDRGL+ E+IIGATDSSGELMFL+KWKG+DEADLVPARQAN +CPQ+VIQFYEERL+WHTSS DE+E
Sbjct:   74 ISEYEENRK-KREAAKKDERKRKPGTPIDDKKPNANKKKHVEEDNKPRGFDRGLEPEKIIGATDSSGELMFLMKWKGTDEADLVPARQANGRCPQIVIQFYEERLTWHTSSHDEDE 188
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1238846098|ref|XP_022241349.1| (chromobox protein homolog 1-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 144.821 bits (364), Expect = 1.042e-41
Identity = 69/113 (61.06%), Postives = 92/113 (81.42%), Query Frame = 0 
Query:    6 VPAFEDSLK---AKKDVAKKRKSDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  +E+S K   A++   KK+K+++ S  +T   KR  E+DS+ +GFDRGL+ +RIIGATDSSGELMFL+KWKGSD+ADLVPA+QAN+KCPQVVI+FYEERL+WHTS+  EE+
Sbjct:   63 IAEYENSRKNTDAEQSDGKKKKNESDSDNSTQKKKRKTEDDSKPKGFDRGLEPDRIIGATDSSGELMFLIKWKGSDDADLVPAKQANVKCPQVVIKFYEERLTWHTSTNHEED 175
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|1227974129|ref|XP_021918522.1| (chromobox protein homolog 1-like isoform X3 [Zootermopsis nevadensis])

HSP 1 Score: 146.362 bits (368), Expect = 1.409e-41
Identity = 73/116 (62.93%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKK--RKSDTASPATTVPP----KRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEEE 115
            +  +E++ K K++ AKK  RK    +P     P    K+H EED++ RGFDRGL+ E+IIGATDSSGELMFL+KWKG+DEADLVPARQAN +CPQ+VIQFYEERL+WHTSS DE+E
Sbjct:  115 ISEYEENRK-KREAAKKDERKRKPGTPIDDKKPNANKKKHVEEDNKPRGFDRGLEPEKIIGATDSSGELMFLMKWKGTDEADLVPARQANGRCPQIVIQFYEERLTWHTSSHDEDE 229
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|929368345|ref|XP_014093967.1| (PREDICTED: chromobox protein homolog 1 [Bactrocera oleae] >gi|929368347|ref|XP_014093968.1| PREDICTED: chromobox protein homolog 1 [Bactrocera oleae])

HSP 1 Score: 142.895 bits (359), Expect = 4.122e-41
Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = 0 
Query:    6 VPAFEDSLKAKKDVAKKRKSDTASPATTVPPKRHPEE--DSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            + AFE+SLK KK+ +KKR S+T    T V  K   EE  + R+ GFDRGL+  +I+GATDSSGELMFL+KWKGSDEADLVPA+QAN+KCPQ+VIQFYEERL+WHT++ +E+
Sbjct:   50 IAAFEESLKTKKE-SKKRSSNTPVNDTKVKRKAVEEERENRRTMGFDRGLEPSKILGATDSSGELMFLMKWKGSDEADLVPAKQANVKCPQIVIQFYEERLTWHTANAEED 159
[Close]
BLAST of chromobox protein homolog 1 vs. nr
Match: gi|926617058|ref|XP_013773677.1| (chromobox protein homolog 1-like isoform X3 [Limulus polyphemus] >gi|926617060|ref|XP_013773678.1| chromobox protein homolog 1-like isoform X3 [Limulus polyphemus])

HSP 1 Score: 142.51 bits (358), Expect = 7.316e-41
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:    6 VPAFEDSLKAK----KDVAKKRK-SDTASPATTVPPKRHPEEDSRSRGFDRGLQAERIIGATDSSGELMFLVKWKGSDEADLVPARQANMKCPQVVIQFYEERLSWHTSSQDEE 114
            +  FE S K+K     D  KKRK S+  S  +T   K+ PE D++ +GFDRGL+ ++IIGATDSSGELMFL+KWKGSDEADLV A+QAN+KCPQVVI+FYEERL+WHT +  EE
Sbjct:   59 IAEFEKSYKSKDGEKNDEKKKRKISEDGSNNSTQKKKKKPENDNKLKGFDRGLEPDKIIGATDSSGELMFLIKWKGSDEADLVAAKQANVKCPQVVIKFYEERLTWHTGTSQEE 172
The following BLAST results are available for this feature:
BLAST of chromobox protein homolog 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000023764.964e-4986.42supercontig:LSalAtl2s:LSalAtl2s1452:27623:28132:1 ... [more]
EMLSAG000000070201.528e-2649.52supercontig:LSalAtl2s:LSalAtl2s399:436338:443827:-... [more]
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BLAST of chromobox protein homolog 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|1170338|sp|P45973.1|CBX5_HUMAN1.980e-3355.56RecName: Full=Chromobox protein homolog 5; AltName... [more]
gi|73619718|sp|Q5R6X7.1|CBX3_PONAB3.606e-3375.36RecName: Full=Chromobox protein homolog 3; AltName... [more]
gi|21903394|sp|P23198.2|CBX3_MOUSE3.933e-3375.36RecName: Full=Chromobox protein homolog 3; AltName... [more]
gi|2493705|sp|Q61686.1|CBX5_MOUSE5.614e-3355.56RecName: Full=Chromobox protein homolog 5; AltName... [more]
gi|48428808|sp|P83916.1|CBX1_HUMAN6.272e-3382.26RecName: Full=Chromobox protein homolog 1; AltName... [more]
gi|123479|sp|P29227.1|HP1_DROVI1.582e-2544.86RecName: Full=Heterochromatin protein 1; Short=HP1[more]
gi|1170337|sp|P05205.2|HP1_DROME3.586e-2456.52RecName: Full=Heterochromatin protein 1; Short=HP1... [more]
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BLAST of chromobox protein homolog 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|961375222|gb|ALS04355.1|1.069e-4673.87chromobox protein homolog 3 isoform x2 [Acartia pa... [more]
gi|290462379|gb|ADD24237.1|4.402e-4586.42Chromobox protein homolog 1 [Lepeophtheirus salmon... [more]
gi|1325288822|ref|XP_023329178.1|2.251e-4468.47chromobox protein homolog 1-like [Eurytemora affin... [more]
gi|646717219|gb|KDR20165.1|3.980e-4262.93Chromobox protein-like protein 5, partial [Zooterm... [more]
gi|926618146|ref|XP_013774270.1|6.875e-4261.06chromobox protein homolog 1-like isoform X2 [Limul... [more]
gi|1227974133|ref|XP_021918524.1|7.560e-4262.93chromobox protein homolog 1-like isoform X5 [Zoote... [more]
gi|1238846098|ref|XP_022241349.1|1.042e-4161.06chromobox protein homolog 1-like isoform X1 [Limul... [more]
gi|1227974129|ref|XP_021918522.1|1.409e-4162.93chromobox protein homolog 1-like isoform X3 [Zoote... [more]
gi|929368345|ref|XP_014093967.1|4.122e-4163.96PREDICTED: chromobox protein homolog 1 [Bactrocera... [more]
gi|926617058|ref|XP_013773677.1|7.316e-4161.40chromobox protein homolog 1-like isoform X3 [Limul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold382_size189932supercontigscaffold382_size189932:178844..181605 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:nucleus
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold382_size189932-snap-gene-0.29-mRNA-1maker-scaffold382_size189932-snap-gene-0.29-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold382_size189932:178844..181605-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold382_size189932-snap-gene-0.29 ID=maker-scaffold382_size189932-snap-gene-0.29|Name=chromobox protein homolog 1|organism=Tigriopus kingsejongensis|type=gene|length=2762bp|location=Sequence derived from alignment at scaffold382_size189932:178844..181605- (Tigriopus kingsejongensis)
ATGGCCCGCATCTGGGTCCCTGTACAATGGGGGGGGTCGAACCCTAATAA
AATGTAAGCCCATTAGGGACCCCCCCCGCATCCGTTCTTTGGCCCTAAAA
AAATGGCCGGCCGGCGAATTAGCGGCCCAACGCTCGGGCCCCATGGCAAG
CCTGCCAATCTGAGCCGACCGCTCAATTTCGTGACTCTAAAGAATAACTG
AAGAGGCCAAGTAGCCAAACTCAATTTTCATTCCCCCAAAGTTCCCCCTA
GCCCTCAATTGTGGCGGTACCTGCCCCCGCCCGTGGCAAAATGTCGGAAG
CCGAGGAGTATGTGGTGGACCAGATCCTGGACAAGCGCATCCGCAACGGC
AAACCCGAGTACTTCCTCTCGTGGAAAGGTTACGGCCCGGATGAGAACAC
TTGGGAGCCCAAAGAGAACCTCGACTGTCCCGAGCTCATCAAGGTGAACA
CCACGACTCACCTCCGTAGCCCTACTCGCCGCCTGGACCGATAGGAACAC
CCTCGCCCGGCTGAAATAGACGCGTTCGGACGGTCGTCCTGGGACGGGGG
TTCGAATCCAGCTCTGGGCGAGTCAGCGACGCAGCCAATCCTCGAGGCAA
TGACGTTAAGCCGAGATCAGACAGTTGGAGCTGAATCGGCTGAGGGCCTG
ATCGAAGTTTTCGCCGTTGTTCATGTCTGGCTCACCGTGTTCTTTGTCTC
AGTTTCACAGCTCACTATTGCCCAAAACCCGGGAAAGACCTTGTCATCGA
AATCATAGGCGACTAGAGCTTGCACGTTACTGGGCCGGTTGAGCCGGTGC
ACGAGGTTTAAAAGCTTAAAGGTTTAAAAAAAGGGCTCCAGCAAGGAGGT
TCTTTATCTGGTGTGAGCGTACCTGGGAAAGTGCAAGTGGTTGAAAGGGC
GAAGCGACAACCGAGGCTGCTGATCTAAATGTAAACAAACTTTTCCCGGC
TGAAAGGGCGAAGCGACAACCGAGGCTGCTGATCTAAATGTAAACAAACT
TTTCCCGGCTGAAAGGGCGAAGCGACAACCGAGGTTGCTGATCTAAATGT
AAACACACTTTTCCCAGCTGAAAGGGCGAAGCGACAACCGAGGCTGCTGA
TCTAAATGTAAACAAACTTTTCCCGGTCTTTTGATGGCGCGCCCGAGAAA
TGCCAAGATGCATTGTTTTTGCATTTAGATCAGCAGCCGTGTTGTCGGTC
CTTTGGTGGACGAGTGGCTGGCTCTAGTTAGAATACCTCAATAAGCTCAA
GCCGAAATGTTGATGAGAGAGTTCAGCTAGTGGCTCAACTTGAGCCCAGA
TGGGTCGGAATGAATAATAACCCGCCTGAGCTGAAACAAGATATTTCAAC
CAAATTCGCACTTCGGTCGGCTTAACCGCCTTGAAATGGGTGGTCCAATC
CCTATTTGGTCGAGTGAGGCACCTAGCAAGTTCAATTTGAAAATGTAACG
GCCAAAGTCGCGTCTAGGTTAGCGTTTCAAAGTCGGCAAAGGTTTCAAAT
GTGGCCCCATGTGTAATAATCAATTGTGTTCTGCCCAACCGCCTAATTTG
CATTCGACTAGTCGGTTTGGGCTCGCAATCGACTCTTGTTTTGGGAGTCG
TCGCCTCGAAACTTTTGACTCTTCCCTAACCCCTCCTAACTTTGTATTTT
AACAGTCTTCAGTTGGTTTGTGGCAGTTTGAGTTGAGTGACCAGTGTGCG
ATTGCTTTGCCAATGTGTAAGCATTGAAATTAGGCATTTTGCAACGTCAG
CGAGCAAATCTTTGCGAGTGTAGAGTTGTGGAACGTCAAAAAACAACTCC
GGCGGGGCAATGAAGTTCCTTTAGGGATATGATAGCGTAGAAAGCTGAAT
CATGCAACTAAATTTGCAAAACAAATCGTGGTACATTTTTGGCATCATCA
GCCAGCAATTCTGGGCGAGTGCAAAGTTGCAAAACGTTAAAAATAACTCC
GGCAGGGCAAGTAGTTGACTTCAATGATATGATCTGGGAGAAAACTGACT
CTTTCAACTTTGTTTTACGAAACGAATCGTGGGATATTTCTTTATTTACT
CAGGATGACGAGTGCGTTGAATCACGCTGATATTCGTCAACCCATTCAGG
GAACTTTGCAATTTTGAGAAGTTCTCGACTCTTGTCTAGTTTCGTAGCTT
TTTTTTAAAACTGGGACGATCATCGCCCTAATGGTTCTCCCCAGAGTATT
TCCAAAACCCTCCTACCCCAGTGGGAGAATGGAATGGCAGTCTTGCATCT
CATTTCAGGCATTCGAGGACAGTCTGAAGGCCAAAAAGGATGTGGCCAAG
AAGCGCAAGAGCGACACCGCATCGCCGGCAACCACCGTTCCACCTAAACG
CCATCCCGAGGAGGATTCGCGCTCCCGCGGGTTCGATCGAGGCTTGCAAG
CCGAGAGGATCATTGGAGCCACAGATTCGAGTGGCGAGCTCATGTTTTTG
GTCAAATGGAAAGGATCCGACGAAGCGGATCTCGTGCCCGCCCGACAGGC
CAATATGAAATGTCCTCAAGTGGTTATCCAGTTTTATGAAGAGCGACTGT
CGTGGCACACCTCCTCGCAGGATGAAGAGGAGTAAGGTTGATCTCATTGT
TTTGTTTATTCCCTGGTGGTTGAATGTGTGTTCACCTCTTTTCCCAAGAC
AATAGCGATGAAGGATCGTCTCGGAAGGCCTCGCAATCTTTTTCGGAAGG
ATTTATTTTCCAGAACGACCTTGTTTACTGAACGGCTAGTATTACAATAA
ACCAAGTGAGAA
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Synonyms
The feature 'chromobox protein homolog 1' has the following synonyms
Synonym
Tk03707
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