polymorphic outer membrane protein g i family, maker-scaffold390_size186308-snap-gene-0.34 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Match: EMLSAG00000005742 (supercontig:LSalAtl2s:LSalAtl2s309:769739:771564:1 gene:EMLSAG00000005742 transcript:EMLSAT00000005742 description:"maker-LSalAtl2s309-augustus-gene-7.83") HSP 1 Score: 317.005 bits (811), Expect = 1.341e-102 Identity = 173/474 (36.50%), Postives = 253/474 (53.38%), Query Frame = 0 Query: 62 GEEKQPKMSIHYSLHESDQILLAPHDPM-------PDVPKERKSSCNYLGRLANDTRATLAVTGCLGIEPTEVTVLGTRHKGAFLLSGDEVEEIPLSMPEGPESRMSIELPDALDWILMEGDELMLITDEKKILLMEQICPLGACTDLPPFHELTIQVGYDTTFFNKVPNPEEWISQVLTHAQAHFYHPSLLVQIRLKILGAPKKFPEHSWRASTSDLKVARTAVMAESKANLYVLFCDDPEYFGTVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAIWSKCSQEDFRSTYRLELSKRG-QHCMATLDVSPDDGTYTPPEVPKEQEGIKTDDGKFTCPAPLWRGDGYCDDMNNVKACGFDAGDCCDKRTAAWNAFCVKCECVGPNITTTTPKPMKVDLCPSPHFKGDGFCDDNNNLAACQYDGGDCCSRRK-NWNFFC 526 G P++S H + ++ L DP+ + K C+YLG + +++ + VTGC G ++T++ R +LL+G EI +P ++ + E AL+ + E+++ T EK L+ C +P H++T+++GYD + K EWIS V+TH Q Y P+L +I + ++G PKK+ ++ W A S V + A +++ +LYV C D +GTVGIA+VGG+C TNG +S+NEWR T A +A+VVAHE+GHN+GM+HDF + CTGIMDYG +P WS CSQ+DF++ Y ++K G +HC+ L S D G+ + C P + GDGYCDD NN +ACGFD GDCC+ W+ FC C+C C P F GDG+CDD NN C +DGGDCCS+ W+ FC Sbjct: 52 GTPISPQLSFHLGNGDFKEVSLKHFDPLHXRMIQLRNGNYSNKMLCHYLGSVESESSVAIGVTGCPGESKVQITLVSRRLTAQYLLNGSS-SEIYQVIPSPWKANANREY--ALNETQITCKEIIVQTIEKSALMASYQCSGMNDCVIPSLHKMTVKIGYDESLEAKETETLEWISGVMTHTQTFLYDPTLPTKIEIDVIGFPKKYHDNEWTAEDSITTVEKYA-QGDTETDLYVFLCADSNLYGTVGIAYVGGLCDTNGYQVSINEWRTTEAETAKVVAHEMGHNMGMSHDFDKVHSGNKCTGIMDYGKTPDTWSSCSQDDFKNHY-FSITKSGKEHCLEVL--SNDSGSVSSH-----------------CDIPSFNGDGYCDDENNNEACGFDGGDCCNNDRGDWDTFCHTCKC-----------HESEGGCEHPEFAGDGYCDDGNNNVGCGFDGGDCCSKSNLKWDHFC 490 HSP 2 Score: 62.7734 bits (151), Expect = 9.590e-11 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 0 Query: 488 CPSPHFKGDGFCDDNNNLAACQYDGGDCCSR-RKNWNFFCQECKC 531 C P F GDG+CDD NN AC +DGGDCC+ R +W+ FC CKC Sbjct: 400 CDIPSFNGDGYCDDENNNEACGFDGGDCCNNDRGDWDTFCHTCKC 444
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Match: EMLSAG00000005689 (supercontig:LSalAtl2s:LSalAtl2s309:181216:182966:-1 gene:EMLSAG00000005689 transcript:EMLSAT00000005689 description:"maker-LSalAtl2s309-snap-gene-1.45") HSP 1 Score: 227.254 bits (578), Expect = 3.741e-69 Identity = 148/419 (35.32%), Postives = 218/419 (52.03%), Query Frame = 0 Query: 59 WTLGEEKQPKMSIHYSLHESDQILLAPHDPMPDVPKERKSSCNYLGRLANDTRATLAVTGCLGIEPTEVTVLGTRHKGAFLL-SGDEVEEIPLSMPEGPESRMSIELPDALDWILMEGDELMLITDEKKILLMEQICPLGACTD---LPPFHELTIQVGYDTTFFNKVPNPEEWISQVLTHAQAHFYHPSLLVQIRLKILGAPKKFPEHSWRASTSDLKVARTAVMAESKANLYVLFCDDPEYFGTVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAIWSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPPEVPKEQEGIKTDDGKFTCPAPLWRGDGYCDDMNNVKACGFDAGDCCDKRTAAWNAFCVKCECVGP 473 + GE + P MS H + L D + + KE C+Y+G++ ND T+ VTGC G +VT++ ++L V E+ S +R ++ +A DE+ L EK M L C+D +P H++TI++ YD++ KV N W+S V+TH QA Y SL +I ++++G K +P+ +WRA TS +V++ A + +LYV C D + GTVG+ +VGG+C TNG +S+NEWR T A +A+VVAHE+GHN+GM+HDF + + GCTGIMDYG +P WS +D + + G C D+ K + + DD + C P + GD YCDD NN CGFD GDCC+ WN +C +C+C P Sbjct: 19 YYAGEPEAPIMSFHLGSGNFQSVNLKQLDLLK-LSKET-FLCHYIGKVKNDDSITIGVTGCPGEPHVQVTLVSKSVTAQYMLDESSNVSEVIPSPWNQELTRXAVLFTNA-----TASDEIFLKGVEK----MAXAASL-ECSDDCVIPSHHKMTIKIAYDSSLKAKVKNVLPWLSGVMTHTQAFLYDSSLPTKIDIEVIGTAKYYPQDTWRAETSIRRVSKYA-KGDKVTDLYVFLCADSKLSGTVGVGYVGGLCDTNGYQVSINEWRKTEAETAKVVAHEMGHNMGMSHDFDSSHAGEGCTGIMDYGKTPDTWSNGYCDDVNNNEACQFD--GGDCC-------DNTNQLWDLYCKTCKCLSKDDKR--CAKPEYVGDRYCDDENNNAGCGFDDGDCCNHSYKFWNKYCKECQCKEP 413 HSP 2 Score: 53.9138 bits (128), Expect = 6.163e-8 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0 Query: 485 VDLCPSPHFKGDGFCDDNNNLAACQYDGGDCCSRRKN-WNFFCQECKCI 532 +D +P +G+CDD NN ACQ+DGGDCC W+ +C+ CKC+ Sbjct: 311 MDYGKTPDTWSNGYCDDVNNNEACQFDGGDCCDNTNQLWDLYCKTCKCL 359
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Match: EMLSAG00000001856 (supercontig:LSalAtl2s:LSalAtl2s131:674806:683302:1 gene:EMLSAG00000001856 transcript:EMLSAT00000001856 description:"maker-LSalAtl2s131-augustus-gene-7.16") HSP 1 Score: 62.7734 bits (151), Expect = 8.669e-11 Identity = 55/211 (26.07%), Postives = 90/211 (42.65%), Query Frame = 0 Query: 201 DLPPFHELTIQVGYDTTFF----NKVPNPEEWISQVLTHAQAHFYHPSLLVQIRLKILGAPKKFPEHSWRASTSDLKVARTAVMA--------ESKANLYVLFCDDPEYFGTVGIAFVGGVCSTNGL-HLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-----WSKCSQEDFRSTYRLELSKRGQHCM 393 +LP + + V D TF N + + I+Q++ H + F+ SL I + + +HS +S V+ E + +VLF D VG++++G +CS + +S+ E+ + +A + AHE+GHNLG+ HD C GIM P I WS CS+ + Y L+K C+ Sbjct: 160 ELPKKLYIRLAVAIDETFKEYFDNDIEKAAKIINQIMLHTEGLFHDESLGADITFQEM----TLYDHSEVSSVGAASEDHLGVLGPYAEEYNKEQFFSHFVLFSYDASGDEVVGMSYIGKICSEDASSRISIAEYDQSPVHTAMIFAHELGHNLGLAHDAGI------CVGIM----YPLIIGADAWSNCSKLQLKGYYNKVLNKIPFFCL 356
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Match: EMLSAG00000000009 (supercontig:LSalAtl2s:LSalAtl2s1003:34902:37082:-1 gene:EMLSAG00000000009 transcript:EMLSAT00000000009 description:"augustus_masked-LSalAtl2s1003-processed-gene-1.1") HSP 1 Score: 54.6842 bits (130), Expect = 4.877e-8 Identity = 56/204 (27.45%), Postives = 83/204 (40.69%), Query Frame = 0 Query: 218 FFNKVP-NPEEWISQVLTHAQAHFYHPSL------LVQIRLKIL-GAPKKFPEHSWRAS---------TSDLKVARTAVMAESKANLYVLFCD------DPEYFGTVGIAFVGGVCSTNG----LHLSLNEWRNT---IAG--SARVVAHEIGHNLGMNHDFSA----------KYKSRGCTGIMDYGDSPAIWSKCSQEDFRS 379 FF + P N ++I + Q+ ++H SL L +RL++L P P H S S L + +YV D +GT+G++ V G+C+ + L +N R AG S V+AHE+GHNLG++HD + SRG G + WSKCS E +S Sbjct: 210 FFQESPENIRDFIVSYMNGVQSLYHHTSLEGLDFDLSIVRLELLESQPSNLPTHGGERSLLLKSFCKYQSSLNTNKNGEAGHWDLGIYVSGIDFYADSNGKTSYGTMGLSPVSGICTEDYNCVIAELGVNNKRGKPYPSAGFTSVYVLAHELGHNLGLHHDGRSGNTCDKNGFIMSASRGTKG-------ESTWSKCSMEKLKS 406
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Match: EMLSAG00000009779 (supercontig:LSalAtl2s:LSalAtl2s633:57612:60616:-1 gene:EMLSAG00000009779 transcript:EMLSAT00000009779 description:"maker-LSalAtl2s633-snap-gene-0.21") HSP 1 Score: 50.447 bits (119), Expect = 8.115e-7 Identity = 38/129 (29.46%), Postives = 59/129 (45.74%), Query Frame = 0 Query: 290 LFCDDPEYFGTVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI------WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPPEVPK 412 L+ P+Y +G+A+V G+C ++NE N S V+AHE+GH+LGMNHD + Y SP + WS CS E+ L++R C+ + + +D Y + K Sbjct: 311 LYDTHPKYDNVIGLAWVSGMCHP-AFSCTINEGNN--FESVYVIAHEMGHSLGMNHD--GELDEGNTCNPNKYLMSPILGPGKVTWSSCSNEEIEQF----LNERQASCLNDIPPTQEDYNYAKAQRYK 430
BLAST of polymorphic outer membrane protein g i family vs. SwissProt
Match: gi|50403719|sp|P14530.3|VM2HA_PROFL (RecName: Full=Zinc metalloproteinase/disintegrin; Contains: RecName: Full=Snake venom metalloproteinase HR2a; Short=SVMP; AltName: Full=Snake venom metalloproteinase HR2b; AltName: Full=Trimerelysin II; Contains: RecName: Full=Disintegrin flavostatin; AltName: Full=Platelet aggregation activation inhibitor; Flags: Precursor) HSP 1 Score: 61.2326 bits (147), Expect = 8.401e-9 Identity = 66/298 (22.15%), Postives = 122/298 (40.94%), Query Frame = 0 Query: 100 CNYLGRLANDTRATLAVTGCLGIEPTEVTVLGTRHKGAFLLSGDEVEEIPLSMPEGPESRM----SIELPD--------ALDWILMEGDELMLITDEKKILLMEQICPLGACTDLPPFHELTIQV--GYDTTFFNKVPNPEEWISQVLTHAQAHFYHPSLLVQIRLKILGAPKKFPEHSWRASTSDLKVA--RTAVMAESKANLYVLFCDDPEYFG-TVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPA-IWSKCSQEDFRS 379 C Y GR+ ND +T +++ C G+ KG F L G+ PL + + + ++E D +W E DE + + + +Q P + EL I V G T + + + + Q++ + + ++ + + L + + K A T+ R V+ + K + + D + G T+G A++GG+C+ + + + + A + HEIGHNLGM HD K K C D P+ ++S CS++ +++ Sbjct: 103 CYYHGRIQNDADSTASISACDGL------------KGYFKLQGETYLIEPLELSDSEAHAVFKYENVEKEDEAPKMCGVTQNW---ESDESIKKASQLYLTPEQQRFP-------QRYIELAIVVDHGMYTKYSSNFKKIRKRVHQMVNNINEMYRPLNIAITLSLLDVWSEKDLITMQAVAPTTARLFGDWRETVLLKQKDHDHAQLLTDINFTGNTIGWAYMGGMCNAKNSVGIVKDHSSNVFMVAVTMTHEIGHNLGMEHDDKDKCKCEACIMSAVISDKPSKLFSDCSKDYYQT 378
BLAST of polymorphic outer membrane protein g i family vs. SwissProt
Match: gi|24211441|sp|Q13443.1|ADAM9_HUMAN (RecName: Full=Disintegrin and metalloproteinase domain-containing protein 9; Short=ADAM 9; AltName: Full=Cellular disintegrin-related protein; AltName: Full=Meltrin-gamma; AltName: Full=Metalloprotease/disintegrin/cysteine-rich protein 9; AltName: Full=Myeloma cell metalloproteinase; Flags: Precursor) HSP 1 Score: 60.8474 bits (146), Expect = 1.550e-8 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 297 YFGTVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 + GT G+AFVG VCS + + T+ A +VAHE+GHNLGMNHD + IM+ G S + +S CS EDF +L L+K G +C+ L++ D Y+ P Sbjct: 309 FGGTAGMAFVGTVCSRSHAGGINVFGQITVETFASIVAHELGHNLGMNHDDGRDCSCGAKSCIMNSGASGSRNFSSCSAEDFE---KLTLNK-GGNCL--LNIPKPDEAYSAP 415
BLAST of polymorphic outer membrane protein g i family vs. SwissProt
Match: gi|341940188|sp|Q61072.2|ADAM9_MOUSE (RecName: Full=Disintegrin and metalloproteinase domain-containing protein 9; Short=ADAM 9; AltName: Full=Meltrin-gamma; AltName: Full=Metalloprotease/disintegrin/cysteine-rich protein 9; AltName: Full=Myeloma cell metalloproteinase; Flags: Precursor) HSP 1 Score: 60.077 bits (144), Expect = 3.442e-8 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 297 YFGTVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 + GT G+AFVG VCS + + T+ A +VAHE+GHNLGMNHD + + IM+ G S + +S CS EDF +L L+K G C+ L++ D Y+ P Sbjct: 309 FGGTAGMAFVGTVCSRSHAGGINVFGQITVETFASIVAHELGHNLGMNHDDGRECFCGAKSCIMNSGASGSRNFSSCSAEDFE---KLTLNKGGS-CL--LNIPKPDEAYSAP 415
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|298714321|emb|CBJ33907.1| (polymorphic Outer membrane protein G/I family [Ectocarpus siliculosus]) HSP 1 Score: 73.1738 bits (178), Expect = 1.104e-9 Identity = 35/105 (33.33%), Postives = 50/105 (47.62%), Query Frame = 0 Query: 431 WRGDGYCDDMNNVKACGFDAGDCCDKRT---AAWNAFCVKCECVGPNITTTTPKPMKVDLCPSPHFKGDGFCDDNNNLAACQYDGGDCCSRRKNWNFFCQECKCI 532 W DG+CD +NN +C +D GDCC+ + + C+ P+ TT + C + DG+CD +NN +C YDGGDCC EC C+ Sbjct: 91 WAKDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSIGFACLDPDCGNTTETAPENTTCEES-WMNDGYCDSSNNYPSCDYDGGDCC-----------ECSCV 183 HSP 2 Score: 70.8626 bits (172), Expect = 5.984e-9 Identity = 36/95 (37.89%), Postives = 44/95 (46.32%), Query Frame = 0 Query: 431 WRGDGYCDDMNNVKACGFDAGDCCD-------KRTAAWNAF-CVKCECVGPNITTTTPKPMKVDLCPSPHFK-GDGFCDDNNNLAACQYDGGDCC 516 W DGYCD NN +C +D GDCC+ N F C+ C P + P C + GDGFCD N A+C +DGGDCC Sbjct: 155 WMNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDPACFDPALVAEFPD------CDAGWLGLGDGFCDSELNTASCGWDGGDCC 243 HSP 3 Score: 65.855 bits (159), Expect = 1.938e-7 Identity = 42/111 (37.84%), Postives = 49/111 (44.14%), Query Frame = 0 Query: 433 GDGYCDDMNNVKACGFDAGDCCDKRTAAWNAFCVKCECV-GPNITTTTPKPMKVDL-CPSPHFKG---------DGFCDDNNNLAACQYDGGDCCSRRKNWNFFCQECKCI 532 G+G CD + NV +CG+D GDCC C CV GP + +T D C P G DGFCD NN +C YDGGDCC EC CI Sbjct: 37 GNGQCDAVLNVPSCGYDGGDCC------------PCTCVDGPTHSCSTS-----DFDCMYPDCGGSECHEDWAKDGFCDLVNNHPSCDYDGGDCC-----------ECSCI 119
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|299117215|emb|CBN75177.1| (polymorphic Outer membrane protein G/I family [Ectocarpus siliculosus]) HSP 1 Score: 70.4774 bits (171), Expect = 6.831e-9 Identity = 38/108 (35.19%), Postives = 51/108 (47.22%), Query Frame = 0 Query: 433 GDGYCDDMNNVKACGFDAGDCCD--------KRTAAWNAFCVKCECVGPNITTTTPKPMKVDLCPSPHFKGDGFCDDNNNLAACQYDGGDCCSRRKNWNFFCQECKCI 532 G+G CD NV +CG+D GDCC A + C+ +C P +T++ D +GDG C++ NN AAC YDGGDCC EC C+ Sbjct: 41 GNGNCDAALNVASCGYDGGDCCSCTCNDGPLHLCADSDFDCMYPDCGDPAVTSS-------DAVCYEDVQGDGMCNEENNSAACGYDGGDCC-----------ECSCV 130 HSP 2 Score: 65.4698 bits (158), Expect = 2.296e-7 Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 0 Query: 432 RGDGYCDDMNNVKACGFDAGDCCDKRTAAWNAF---------CVKCECVGPNITTTTPKPMKVDLCPSPHFK-GDGFCDDNNNLAACQYDGGD 514 +GDG C++ NN ACG+D GDCC+ F C C P + P C FK GDG C+ NN+A+C YDGGD Sbjct: 103 QGDGMCNEENNSAACGYDGGDCCECSCVDGPLFECGSFSIFDCRDPACYDPALVAEFPD------CTGDWFKIGDGACNPENNIASCGYDGGD 189
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|1160121214|ref|XP_020386972.1| (disintegrin and metalloproteinase domain-containing protein 9-like, partial [Rhincodon typus]) HSP 1 Score: 64.3142 bits (155), Expect = 1.642e-8 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 298 FG-TVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 FG T G+AFV +CS + +N + I A +VAHE+GHNLGMNHD K K IM+ G + A+ +S CS +DF + + RG C+ L++ + Y+PP Sbjct: 4 FGETAGMAFVSTICSRS-HSGGINVFSQNILYFASIVAHELGHNLGMNHDNDRKCKCEAEVCIMNAGATGAMNFSSCSADDFEAM----ILNRGGSCL--LNIPTPEEEYSPP 109
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|298713256|emb|CBJ26952.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 66.6254 bits (161), Expect = 6.646e-8 Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0 Query: 426 CPAPLWRGDGYCDDMNNVKACGFDAGDCCD---------KRTAAWNAFCVKCECVGPNITTTTPKPMKVDL---CPSPHFKGDGFCDDNNNLAACQYDGGDCCS 517 C P+ G+G+CD+ NN++ACG+D GDCC+ W+ C++ C+ P+ + VD+ C G+G+CD NNN C YDGGDCCS Sbjct: 193 CEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCS 296 HSP 2 Score: 63.5438 bits (153), Expect = 5.825e-7 Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 0 Query: 408 PEVPKEQEGIKTDDGKFTCPAPLWRGDGYCDDMNNVKACGFDAGDCCD---KRTAAWNAFCVKCECVGPNITTTTPKPMKVDL---CPSPHFKGDGFCDDNNNLAACQYDGGDCCS 517 PE P + T D C P GDG+CD+ NN + C +D GDCC+ + + + C CV PN + +D+ C GDG+C +N N C YDGGDCCS Sbjct: 39 PEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHCRNFACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCS 154
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|299117216|emb|CBN75178.1| (polymorphic Outer membrane protein G/I family [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 1.865e-7 Identity = 40/108 (37.04%), Postives = 52/108 (48.15%), Query Frame = 0 Query: 433 GDGYCDDMNNVKACGFDAGDCCD--------KRTAAWNAFCVKCECVGPNITTTTPKPMKVDLCPSPHFKGDGFCDDNNNLAACQYDGGDCCSRRKNWNFFCQECKCI 532 G+G CD + NV +CG+D GDCC A + CV EC P +T++ D +GDG C++ NN AAC YDGGDCC EC C+ Sbjct: 41 GNGNCDAVLNVASCGYDGGDCCSCTCNDGPFHLCADSDFDCVYPECGDPAVTSS-------DAVCDEDMQGDGMCNEENNSAACGYDGGDCC-----------ECSCV 130
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|736219153|ref|XP_010779389.1| (PREDICTED: disintegrin and metalloproteinase domain-containing protein 9-like [Notothenia coriiceps]) HSP 1 Score: 65.0846 bits (157), Expect = 2.404e-7 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 0 Query: 272 LKVARTAVMAESKANLYVLFCDDPEYFG-TVGIAFVGGVCSTNGLHLSLNEWR-NTIAGSARVVAHEIGHNLGMNHDFSA-KYKSRGCTGIMDYGDSPAIWSKCSQEDF 377 +K +T ++ + + ++ L P+ +G VG+AFVG VCST +N + N + ++ VVAHE+GHNLGMNHD + ++GC G SP ++S CS EDF Sbjct: 279 VKWRKTTLLPKIRHDIGQLIIGRPKTYGNVVGMAFVGTVCST-ATSGGINVFNHNNLPAASAVVAHEMGHNLGMNHDRAGCSCDTKGCIMGAATGGSP-MFSSCSGEDF 385
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|299470749|emb|CBN79795.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.6994 bits (156), Expect = 2.510e-7 Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 0 Query: 431 WRGDGYCDDMNNVKACGFDAGDCCD-----KRTAAWNAFCVKCECVGPNITTTTPKPMKVDLCPS--PHFKGDGFCDDNNNLAACQYDGGDCCSRRKNWNF 524 + GDG CD NN++ CG+D+GDCC+ T + C CV P + + + + VD+ + GDG+C ++NN C YD GDCC +F Sbjct: 76 YLGDGICDTSNNIETCGYDSGDCCECTCGYDSTDVLDGSCSDFACVDP-MASCFDESITVDMFENCDAELLGDGYCQESNNNEICDYDFGDCCESTCGVDF 175 HSP 2 Score: 63.5438 bits (153), Expect = 5.984e-7 Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0 Query: 433 GDGYCDDMNNVKACGFDAGDCCD---KRTAAWN--AFCVKCECV---GPNITTTTPKPMKVDLCPSPHFKGDGFCDDNNNLAACQYDGGDCC 516 GDG+CDD NN + CG+D GDCC+ + W+ + C + C+ P V+ C + GDG CD +NN+ C YD GDCC Sbjct: 9 GDGFCDDYNNNEQCGYDGGDCCECTCVVSTLWSTESSCTEFACIDPRAPCADDDDITADAVESCIIDYL-GDGICDTSNNIETCGYDSGDCC 99
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|556964348|ref|XP_005991955.1| (PREDICTED: disintegrin and metalloproteinase domain-containing protein 9, partial [Latimeria chalumnae]) HSP 1 Score: 65.0846 bits (157), Expect = 2.790e-7 Identity = 56/215 (26.05%), Postives = 96/215 (44.65%), Query Frame = 0 Query: 202 LPPFHELTIQVGYDTTFFNKVPNPEEWISQVLTHAQAHFYHPSLLVQIRLKILG------APKKFPEHSWRASTSDLKVARTAVMAESKANLYVLFCDDPEYFGTVGIAFVGGVCS-TNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 LP + + + D ++ V + + + + + +++ IR+ ++G A K E S S R + + + + F + GT G+AFVG VCS ++G +++ N + + +VAHE+GHNLGMNHD K IM G + + +S CS +DF + RG C+ L++ D Y+PP Sbjct: 249 LPQTRYVELFLVVDKERYDHVDKNQTAVREEMVQLANYLDSMYIMLNIRIVLVGLEIWTNANKISVEGSAGDVLSRFVQWREKELVQRRRHDSAQFILKRSFGGTAGMAFVGTVCSRSHGGGINVFP-HNNVHSFSSIVAHELGHNLGMNHDDGRKCTCAISGCIMGAGATGSRNFSSCSSDDFEKL----ILNRGGSCL--LNIPKPDEAYSPP 456
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|1160118937|ref|XP_020385767.1| (disintegrin and metalloproteinase domain-containing protein 9 isoform X1 [Rhincodon typus]) HSP 1 Score: 63.929 bits (154), Expect = 5.774e-7 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 298 FG-TVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 FG T G+AFV +CS + +N + I A +VAHE+GHNLGMNHD K K IM+ G + A+ +S CS +DF + + RG C+ L++ + Y+PP Sbjct: 294 FGETAGMAFVSTICSRSHSG-GINVFSQNILYFASIVAHELGHNLGMNHDNDRKCKCEAEVCIMNAGATGAMNFSSCSADDFEAM----ILNRGGSCL--LNIPTPEEEYSPP 399
BLAST of polymorphic outer membrane protein g i family vs. nr
Match: gi|1160118939|ref|XP_020385768.1| (disintegrin and metalloproteinase domain-containing protein 9 isoform X2 [Rhincodon typus]) HSP 1 Score: 63.929 bits (154), Expect = 6.053e-7 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 298 FG-TVGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAKYKSRGCTGIMDYGDSPAI-WSKCSQEDFRSTYRLELSKRGQHCMATLDVSPDDGTYTPP 408 FG T G+AFV +CS + +N + I A +VAHE+GHNLGMNHD K K IM+ G + A+ +S CS +DF + + RG C+ L++ + Y+PP Sbjct: 294 FGETAGMAFVSTICSRSHSG-GINVFSQNILYFASIVAHELGHNLGMNHDNDRKCKCEAEVCIMNAGATGAMNFSSCSADDFEAM----ILNRGGSCL--LNIPTPEEEYSPP 399 The following BLAST results are available for this feature:
BLAST of polymorphic outer membrane protein g i family vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of polymorphic outer membrane protein g i family vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of polymorphic outer membrane protein g i family vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold390_size186308:86138..88174- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold390_size186308-snap-gene-0.34 ID=maker-scaffold390_size186308-snap-gene-0.34|Name=polymorphic outer membrane protein g i family|organism=Tigriopus kingsejongensis|type=gene|length=2037bp|location=Sequence derived from alignment at scaffold390_size186308:86138..88174- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'polymorphic outer membrane protein g i family' has the following synonyms
Add to Basket
|