39s ribosomal protein mitochondrial, maker-scaffold395_size185061-snap-gene-0.36 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namemaker-scaffold395_size185061-snap-gene-0.36
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000003794 (supercontig:LSalAtl2s:LSalAtl2s205:263075:279463:1 gene:EMLSAG00000003794 transcript:EMLSAT00000003794 description:"maker-LSalAtl2s205-augustus-gene-2.8")

HSP 1 Score: 114.39 bits (285), Expect = 7.630e-32
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0
Query:  133 VDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRANLSVDF 279
            VD SMENLEEVVRER RAYWELEVGE+GE+ER +    +F +E EY   EH +P+E+NEE++   + ++      +   F     E   +   +KK+R+MR     LRR+PNV++  LQEK+P   +E +KR+    G+  N   D 
Sbjct:   12 VDDSMENLEEVVRERXRAYWELEVGETGERER-IKRIGSFGIEVEYNPIEHNLPYEVNEEYKNTLRLKYSCNYGPEVTEFLEHYHEVLVKKESKKKHREMRICLETLRRYPNVEDHVLQEKFPLIDIELIKRWNKIKGHHDNAQWDV 157          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|212276461|sp|Q9HD33.2|RM47_HUMAN (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; AltName: Full=Mitochondrial large ribosomal subunit protein uL29m; AltName: Full=Nasopharyngeal carcinoma metastasis-related protein 1; Flags: Precursor)

HSP 1 Score: 111.309 bits (277), Expect = 3.685e-28
Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 0
Query:   53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGE----SGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDE 247
             H++  R  + EFF+   NWG+ KV  G +W   +LR + NE+LHKLWYVLLKERN LLTLE   K++ LPMP+ ERLDKV  SM+ L++VV+ER  A   L+ G+     G   R +     +   ++++     +P+ LN+ +    ++RF+     D   F R  RE+  +   +K+  + +    +L++FP++ E
Sbjct:   55 LHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDIFGRIIWHKFKQWV-----IPWHLNKRYN---RKRFFALPYVDH--FLRLEREKRARIKARKENLERKKAKILLKKFPHLAE 243          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|83305636|sp|Q8K2Y7.2|RM47_MOUSE (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; Flags: Precursor)

HSP 1 Score: 106.686 bits (265), Expect = 2.032e-26
Identity = 70/197 (35.53%), Postives = 114/197 (57.87%), Query Frame = 0
Query:   53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLR-RFPNVDEE 248
             H++  R  + EFF+   NWG+ KV  G SW   +LR + NE+LHKLWYVLLKERN LLTLE   K++ LPMP+ ERL+KV  SM+N+++VV+ER  A   L+ G+   +      D  F     +  ++  +P+ LN+ +    ++RF+     D    + R+R + +  ++ +K    +   ++L  +FP++ +E
Sbjct:   57 LHTTLSRKGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDNVDKVVQEREDALRLLQTGQEKPRPGAWRRD-IFGRIVWHKFKQWPIPWYLNKRYN---RRRFFAMPYVDR---FIRLRIEKHARIEARKRSLQKKKEKILHAKFPHLSQE 246          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|122132362|sp|Q08DT6.1|RM47_BOVIN (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; Flags: Precursor)

HSP 1 Score: 102.834 bits (255), Expect = 6.133e-25
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGE 158
              ++  R  + EFF+   NWG+ KV  G SW   +LR + NE+LHKLWYVLLKERN LLTLE   K++ LPMP+ ERL+KV  SM+ L++VV+ER  A   L+ G+
Sbjct:   57 LQTTLSRRGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQ 162          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74583169|sp|P87232.1|RM04_SCHPO (RecName: Full=54S ribosomal protein L4, mitochondrial; Flags: Precursor)

HSP 1 Score: 52.373 bits (124), Expect = 2.237e-7
Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   80 GRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCK--QEVLPMPNEERLDKVDISMENLEEVVRERNRAY 151
            GR+W  +ELR +   +LH LWY  L+E+N L T     K  Q  +P  + ER+  V+ +M  ++ V+ ER RAY
Sbjct:   58 GRAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEMKRLQLTIPKASNERVLAVNKTMAAIKFVLWERQRAY 131          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817085838|ref|XP_012265622.1| (39S ribosomal protein L47, mitochondrial isoform X1 [Athalia rosae])

HSP 1 Score: 193.356 bits (490), Expect = 5.422e-57
Identity = 114/269 (42.38%), Postives = 158/269 (58.74%), Query Frame = 0
Query:    8 QAPSFTSDSLGGFTLDRSMCSATQIGLR---RDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273
            +A +  S     FTL  ++ S T    R   R P+        +  + FH++ +R DIMEFF+   NWG+ KV VGR+W KDELRL+ NE+LHKLW+VLLKERN LLT+EH  K+E    PN ER DKVD SMENLEEVVRERNRAY  LE G+ GE+  +V+  S   +   Y   EH +P  +N   RE YK   +       R F    RE+ +Q  ++   R+      +++RFPN+D EA+++ YPN ++E + +   + G+ A
Sbjct:   12 KAVNNVSKLFTNFTLSSNVISTTASVTRLTTRIPT------CAMQTACFHTTLRRNDIMEFFDDPKNWGETKVKVGRAWKKDELRLKSNEDLHKLWFVLLKERNMLLTMEHAAKEEHEIFPNPERKDKVDESMENLEEVVRERNRAYHLLETGQDGERSGKVV-TSQLGLRYYYRFSEHKIPKFMNSGWRERYK---FGSHGHAVRKFLTLYREKLWQTKRKAMVRERNHVMHLIKRFPNMDPEAIKKHYPNVNLENLAQKSKSRGHYA 270          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|759077741|ref|XP_011348647.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Ooceraea biroi])

HSP 1 Score: 190.66 bits (483), Expect = 4.517e-56
Identity = 110/268 (41.04%), Postives = 163/268 (60.82%), Query Frame = 0
Query:    7 FQAPSFTSDSLGGFTLDRS-MCSATQIGLRRDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273
            F++ +  ++ L   +L +S + S   + LR  P+        +  ++ H + +R D+MEFF+   +W KN+V VGRSW + ELRL+ N +LHKLWYVLLKERN L+T+E  CKQ     PN ERLDKV+ISM+NLE VVRERN AY  LE GE+GE+  +++ +    M+  Y   EH +P  +N+  R   K+  +   +   R F    RE+ + + ++ + R+ R  A +LRRFPNVD EAL+E++PN  ++  K  K A G+ A
Sbjct:   11 FRSVNNITNLLKTLSLSQSAIISPKHVFLRSTPA--------LHCAFLHITSERYDLMEFFDDPKHWAKNEVRVGRSWRRVELRLKSNTDLHKLWYVLLKERNMLMTMEEACKQANEIFPNPERLDKVEISMKNLERVVRERNTAYHMLETGETGERPGKLVYNR-IGMKYFYRMTEHPIPIFMNKSWR---KKNLFGFKERSVRKFLGFYREKLWNEKRKARNREKRRVAVILRRFPNVDLEALKEQFPNVDIKAAKASKVARGHYA 266          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817085840|ref|XP_012265623.1| (39S ribosomal protein L47, mitochondrial isoform X2 [Athalia rosae])

HSP 1 Score: 188.348 bits (477), Expect = 9.377e-56
Identity = 104/221 (47.06%), Postives = 141/221 (63.80%), Query Frame = 0
Query:   53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273
            FH++ +R DIMEFF+   NWG+ KV VGR+W KDELRL+ NE+LHKLW+VLLKERN LLT+EH  K+E    PN ER DKVD SMENLEEVVRERNRAY  LE G+ GE+  +V+  S   +   Y   EH +P  +N   RE YK   +       R F    RE+ +Q  ++   R+      +++RFPN+D EA+++ YPN ++E + +   + G+ A
Sbjct:    6 FHTTLRRNDIMEFFDDPKNWGETKVKVGRAWKKDELRLKSNEDLHKLWFVLLKERNMLLTMEHAAKEEHEIFPNPERKDKVDESMENLEEVVRERNRAYHLLETGQDGERSGKVV-TSQLGLRYYYRFSEHKIPKFMNSGWRERYK---FGSHGHAVRKFLTLYREKLWQTKRKAMVRERNHVMHLIKRFPNMDPEAIKKHYPNVNLENLAQKSKSRGHYA 222          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1009426726|gb|KYN44804.1| (39S ribosomal protein L47, mitochondrial [Trachymyrmex septentrionalis])

HSP 1 Score: 188.348 bits (477), Expect = 4.613e-55
Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0
Query:   51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271
            ++ H + +RCD+MEFF+   NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E  C   V   PN ERLDKV  SM NLE VVRERNRAY  LE GE+GE+  + + +    +   Y   ++++P  +N      YK   +      +R F R  REQ +   ++ + R+    A ++R+FPN+D EA++E++P+  VE++K  K A G+
Sbjct:   48 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYNC-LGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 264          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|936560234|ref|XP_014207371.1| (39S ribosomal protein L47, mitochondrial [Copidosoma floridanum])

HSP 1 Score: 187.578 bits (475), Expect = 9.527e-55
Identity = 92/215 (42.79%), Postives = 144/215 (66.98%), Query Frame = 0
Query:   51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDS-RVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKR 264
            +  H+S +  D+MEFF+K+ NW K ++ VGRSW  DELR++ NE+LHKLWYVLLKE+N LLT+EH C +     PN ERLDKV+ SM+NLE VVRERN AY++LE G++GE   +++ ++   + + Y   +H +P  +N    + +K+++  G    + R F  + RE  + + +++  R+      +L++FPN+D EAL++KYPNA++E+  R
Sbjct:   48 ALIHTSSRTDDLMEFFDKDINWTKQRIQVGRSWSTDELRIKSNEDLHKLWYVLLKEKNMLLTMEHACNEAYELFPNPERLDKVEESMKNLETVVRERNEAYYQLETGQTGEVPSKIV-NNVLGLRQYYRFSQHVIPKGIN----QTWKKKYLFGYGGHAVRKFLLKYRENIWNEKRKRNNRETNAAISLLKKFPNLDMEALRQKYPNANIEKALR 257          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070132730|ref|XP_018343394.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis] >gi|1070132732|ref|XP_018343401.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis] >gi|1070132734|ref|XP_018343408.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis])

HSP 1 Score: 188.734 bits (478), Expect = 1.038e-54
Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0
Query:   51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271
            ++ H + +RCD+MEFF+   NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E  C   V   PN ERLDKV  SM NLE VVRERNRAY  LE GE+GE+  + + +    +   Y   ++++P  +N      YK   +      +R F R  REQ +   ++ + R+    A ++R+FPN+D EA++E++P+  VE++K  K A G+
Sbjct:   97 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYN-CLGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 313          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1009372321|gb|KYM96446.1| (39S ribosomal protein L47, mitochondrial [Cyphomyrmex costatus])

HSP 1 Score: 187.193 bits (474), Expect = 1.045e-54
Identity = 105/260 (40.38%), Postives = 154/260 (59.23%), Query Frame = 0
Query:   13 TSDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWF-HSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271
            T  S+ G T   +  S T   +   P R      P     F H + +R D+MEFF+   NWGKN++ VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E  CK      PN ERLDKV  SM NLE +VRERNRAY  LE GE+GE+  +++ +    +   Y   +H++P  +N    + YK   +      +R F R  RE+ + + ++ + R+    A ++R+FPN+D EA++E++P+  +E+ K  K A+G+
Sbjct:   10 TRTSINGITKLFTNLSLTPPSVIESPKRAFLRSTPALHCAFIHFTSERRDLMEFFDDPKNWGKNEIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACKDANEIFPNPERLDKVQDSMSNLESIVRERNRAYHLLETGETGERPGKLVYNC-LGLRFYYQMGQHSIPKFVNT---KWYKTHMFGYGGYATRKFLRLYREKLWNNKRRARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDIEKTKASKRAIGH 265          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070609195|ref|XP_018402366.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Cyphomyrmex costatus])

HSP 1 Score: 187.578 bits (475), Expect = 1.167e-54
Identity = 105/260 (40.38%), Postives = 154/260 (59.23%), Query Frame = 0
Query:   13 TSDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWF-HSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271
            T  S+ G T   +  S T   +   P R      P     F H + +R D+MEFF+   NWGKN++ VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E  CK      PN ERLDKV  SM NLE +VRERNRAY  LE GE+GE+  +++ +    +   Y   +H++P  +N    + YK   +      +R F R  RE+ + + ++ + R+    A ++R+FPN+D EA++E++P+  +E+ K  K A+G+
Sbjct:   19 TRTSINGITKLFTNLSLTPPSVIESPKRAFLRSTPALHCAFIHFTSERRDLMEFFDDPKNWGKNEIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACKDANEIFPNPERLDKVQDSMSNLESIVRERNRAYHLLETGETGERPGKLVYNC-LGLRFYYQMGQHSIPKFVNT---KWYKTHMFGYGGYATRKFLRLYREKLWNNKRRARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDIEKTKASKRAIGH 274          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070132728|ref|XP_018343384.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X1 [Trachymyrmex septentrionalis])

HSP 1 Score: 189.119 bits (479), Expect = 1.294e-54
Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0
Query:   51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271
            ++ H + +RCD+MEFF+   NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E  C   V   PN ERLDKV  SM NLE VVRERNRAY  LE GE+GE+  + + +    +   Y   ++++P  +N      YK   +      +R F R  REQ +   ++ + R+    A ++R+FPN+D EA++E++P+  VE++K  K A G+
Sbjct:  115 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYN-CLGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 331          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1227977995|ref|XP_021920542.1| (39S ribosomal protein L47, mitochondrial [Zootermopsis nevadensis] >gi|646715565|gb|KDR19128.1| 39S ribosomal protein L47, mitochondrial [Zootermopsis nevadensis])

HSP 1 Score: 185.652 bits (470), Expect = 3.678e-54
Identity = 100/262 (38.17%), Postives = 163/262 (62.21%), Query Frame = 0
Query:   14 SDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRANL 275
            S +L       S  S   I   +   R + ++ P   S FH++  + D+MEFF+ ++NW KN+V VGRSW KDELR++ N +LHKLW+VLLKE+N LLT+EH  K+++   PN ER+DKV+ SM+NLE+VVRERN AY++LE G++GE+   V    +  +   +   EH +P  +N+E ++ +K    T    D + F    RE+ + + ++ + R+      +++RFPN+D EA++E++P+  +E+++  K   G+R N+
Sbjct:    8 SKTLNSMFKSFSSLSVMNISKTKCVPRTSSVVCPC--SCFHATSVKQDLMEFFDDKNNWAKNEVKVGRSWKKDELRIKSNSDLHKLWFVLLKEKNMLLTMEHESKEQIQLFPNPERIDKVEESMKNLEDVVRERNEAYFKLETGQTGERPVCV-RTGSLGLRYNHRMAEHIIPQFMNKEWQQRHKSYAHT---RDVKNFITLYREKKFLEKRKARNRERNHVIGLMKRFPNLDFEAVKEQFPSVDIEKIRYQKKTRGHRENI 263          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000037947.630e-3242.86supercontig:LSalAtl2s:LSalAtl2s205:263075:279463:1... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|212276461|sp|Q9HD33.2|RM47_HUMAN3.685e-2836.18RecName: Full=39S ribosomal protein L47, mitochond... [more]
gi|83305636|sp|Q8K2Y7.2|RM47_MOUSE2.032e-2635.53RecName: Full=39S ribosomal protein L47, mitochond... [more]
gi|122132362|sp|Q08DT6.1|RM47_BOVIN6.133e-2550.94RecName: Full=39S ribosomal protein L47, mitochond... [more]
gi|74583169|sp|P87232.1|RM04_SCHPO2.237e-739.19RecName: Full=54S ribosomal protein L4, mitochondr... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|817085838|ref|XP_012265622.1|5.422e-5742.3839S ribosomal protein L47, mitochondrial isoform X... [more]
gi|759077741|ref|XP_011348647.1|4.517e-5641.04PREDICTED: 39S ribosomal protein L47, mitochondria... [more]
gi|817085840|ref|XP_012265623.1|9.377e-5647.0639S ribosomal protein L47, mitochondrial isoform X... [more]
gi|1009426726|gb|KYN44804.1|4.613e-5544.3439S ribosomal protein L47, mitochondrial [Trachymy... [more]
gi|936560234|ref|XP_014207371.1|9.527e-5542.7939S ribosomal protein L47, mitochondrial [Copidoso... [more]
gi|1070132730|ref|XP_018343394.1|1.038e-5444.34PREDICTED: 39S ribosomal protein L47, mitochondria... [more]
gi|1009372321|gb|KYM96446.1|1.045e-5440.3839S ribosomal protein L47, mitochondrial [Cyphomyr... [more]
gi|1070609195|ref|XP_018402366.1|1.167e-5440.38PREDICTED: 39S ribosomal protein L47, mitochondria... [more]
gi|1070132728|ref|XP_018343384.1|1.294e-5444.34PREDICTED: 39S ribosomal protein L47, mitochondria... [more]
gi|1227977995|ref|XP_021920542.1|3.678e-5438.1739S ribosomal protein L47, mitochondrial [Zootermo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold395_size185061supercontigscaffold395_size185061:60422..68608 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold395_size185061-snap-gene-0.36-mRNA-1maker-scaffold395_size185061-snap-gene-0.36-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold395_size185061:60422..68608-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold395_size185061-snap-gene-0.36 ID=maker-scaffold395_size185061-snap-gene-0.36|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=8187bp|location=Sequence derived from alignment at scaffold395_size185061:60422..68608- (Tigriopus kingsejongensis)
ATGTATTGTCGCTGCGAGTTTCAAGCGCCGTCATTCACCTCGGACTCCTT GGGTGGATTCACTTTGGACCGCTCAATGTGCTCGGCCACCCAAATTGGAC TGCGCCGAGATCCGTCGTATTCCAGGCAATGCCCATTGTAGCAAATGGGC TCCAGATTCATTCGGACCGGAGCTCCATACTTGAGCATCGATACAGGGAT CTTTTGTTCGCCTAAAGAGGTATTGTTGTGATGTGTGCATTGGTGCCCAG TTAATGACAAGAATTGTGCCACGCAGTAAAAAAAAGCAAGAAAAGGGAAG ACAATCGTTGTAAAGTGTCTAAATCAGAGTTAAATGCTGGAGACTATATT TTATCAATTTGATTAAAAACAAATTCATTTGATTCTTCTTGGGTTAAAGT TTGTAAAGGAGGCAAGGAAAGGTGCAAAAGTTACAAAAAGTGTAAATCAG GTAGTCTTTTAAAGTAAGTGAACGAGCTCCAAGTTTTCCTGTCCTACCAG ATTTTAAAAAATGTCACCAGCCGCAACAAATCGGAAGATGCGCACTAAAT CGTACCTTTTTAAGATACTGGCAATCCTTTGTAGAAGCATTCCAAGCGAT TGAGAGCCTTAATGAAAAGTTTTCGAAATGCTTGCGAAGTTTGTTTGTTT GTTTGGAAGGCCCCCCGGACATTTCTGTCCAGCTAGGAAATCTCTATGGA GAGATAGTCAGCCTGGCGGTCAAATTGATCATGAGTTATTACCTTACCCT CGAGGAATGACCACAGGTACGCCCAATTTAATTCCGTAAAGGAAGCAAAC AATAGCTGTGAGTGAACACCACTAGTTACCGTGAACTGGGGAAGCCCGGG ATTCGAACCCCGGCCACTCAGCACCAGCGCAGCGCTCGCCGACACTGAGC TATGGTGGCTTGCGAAGTATTGGTTATCTTTAGGAAATATTAAATAAATG TGAGACCCTATTCGGGTTGAAATATGGCAAAAACAAAATAAAGGTTCTAG AAATTATTTGTAGCTCAGAAAGTAATTTTGAACAAGTCTGAAAAATGGTT TGTTAGCATTTTTTTGGCTGAAATGTTGTGGGTTCACGCGAGGGTTGCTA GTTGGAAGTAAATTTGACTTTGAACCTTTAGTCCAATCTGTTCGAAAAGC TTAAGCACATGAACTCCAATTACAAACAAATACTGTACACTTAATAGTCA CTTCTCAATCTTATCCAAAGGACGAAAAGGGAAAGGCATCTTCAGCTTGG AGAATTTGAAGCTGACCAATGAACCCATGGTGAATGGCAAATGGGGAAAG TTCGATGGCAACGAGACACTAGGTCCACTAATTTAGGATTACAAACACTA CAGATATATTTTAAACACACTCAAAATTTAACAATCTGATGACAGACAAG GTTACCCCAATCATTTTATGCAGCCACACTTCCATAGTTATCTGATCCAT ATTTATATTGGCCCATTCGCCCCAACCCATCCGAAAATAGAAAAAACATC ACCAACCATTTGTGGAGTTTGAGGATGGATTTGTTTTCACTGCATGTCAG AGAAAGAGAAAGAGTCCATAAAGCAGCAGTGCCACCAATTTTGAGCTGAA ATACCCTTGGACAACACTAATACACATACCTTTAAGCCACACCCATCTCT GTCAAACAAAGCACAAATGAGTAGGGATGGACCAGCGGTAAATATTTCCA GACTGATTGGGGGGCATCCCCTCTCCACGAGGGTACATTTCTCCCCTAAA GTGTCAAAAAACTGAGTTCAATTACCTGCCTGAAAAGTGATATCTGGAGG ATGGGTCCGTTGCCTCCAACTGTATCCGACCAGACTTCCCATGCCCAGGG CGACGCCATATTTGCCCAAAGCCTGGATGGCTCCGGAAGTGGCCATGTTT TGGGACAAGCACTCGGATCTTACTGGCCCAAACTGTTCCAATCCAAACGT GAAATTAATGGTTTACTGAAGTTGCGTGAGGATAATATTGACCGGGCTCA GGCTGGCCACATTGGCTTCAAGCCCCAAAGACTCTTAATTCCAATCCAGT CATTTCTTGGGGGGTCTGGCGAGAAAATAAAGTGCTTGCGGAATCTATTT TCCAACTTTCTTAGTTTGTCACATAATTCTGTTGGAGTGAAAGAGCCTTG AGGGGACAATGGAATTTGGTTCAGATGCAATCGTGCACGCTTTGGTACTA GTTGGCTGCTGAGGCCTCCACCGAGGCCCCATGGGGGAAAGTACTAAAGC TCGAGTCGAACTTGACGCCCAGCAAGTCAAGCTTTTTGTCAGGGAACACC GTGACCCCATCCACCAGGACGTGGAAGTCCTCGAGGTCTGCGCGCCGGAC TTTACCCCCAAGCATGAGCTGTGTCTTGGAGGCATTCATGATGAGCCCAT TGCCCGCTGCAAACCGAGCAAAACTCTCTGCCCGTTGATCTAGGAGAGAT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTC TTGGGGGGTCTGGCGAGAAAATAAAGTGCTTGCGGAATCTATTTTCCAAC TTTCTTAGTTTGTCACATAATTCTGTTGGAGTGAAAGAGCCTTGAGGGGA CAATGGAATTTGGTTCAGATGCAATCGTGCACGCTTTGGTACTAGTTGGC TGGGCCAACTACTGTATTTGGCGTCCCTATAGACATACACAAATATCAAC AAAGTCACGGAACCCCTCCCAAATTAGAACAACTACCTGGCCAGATTGTA AAGCATTGGCGAGATGTTCTCCATCAGAGTTCTATCTGGATGGCTACGAC AATCGGAACCCAGGTAATAGAACAAAAAAGCCAGGTTAAAGTAGGGGGAT GGCGGTCTTGGTGCGCCCAAACAGTTCTAACATCCAACCTGACCTAACCT GACCCGACCTAACCTCACCCTAACAGTATGTCAACTACGCTCGAATAAAG CTAGCCGCAGCGCTAATCTAGGTCAACTACGCTCGAATTAAGCTAGCCGC AGCGCTAATCTAGGTCAACTACGCTCGAATTAAGCTAGCCGCAGCGCTAA TCTAGGTGAACTACGCTCGAATAAAGCTAGCCGCAGCGCTAATCTAGGTC AACTAGGCTCGAATTAAGCTAGCCGCAGCGCTAATCTAGGTCAACTAGGC TCGAATTAAGCTAGCCGCAGCGCTAATCTAGGTCAACTACGCTCGAATTA AGCTAGCCGCAGCGCTAATCTAGGTCAACTACGCTCGAATTAAGCTAGCC GCAGCGCTAATCTAGGTCAACTAGGCTCGAATTAAGCTAGCCGCAGCGCT AATCTAGGTCAACTACGCTCGAATTAAGCTAGCCGCAGCACTAATCTAGG TCAACTACGCTCGAATTAAGCTAGCCGCAGCGCTAATCTAGGTCAACTAG GCTCGAATTAAGCTAGCCGCAGCGCTAATCTAGGTCAACTACGCTCGAAT TAAGCTAGCCGCAGCGCTAATCTAGGTCAACTACGCTCGAATTAAGCTAG CCGCAGCGCTAATCTAGGTCAACTGCGCTCGAATTAAGCTAGCCGCAGCG CTAGTCTAGGTCAACTGCGCTCGAATTAAGCTAGCCGCAGCACTAATCTA CATCTAGGTAAATTACACGCAAATTAAGCTAGCCGCAGCGCTAATCTAGG TGAACTACGCTCGAGTGATCCTAGCCGCAGCGCTAATCTAAGTAAACTAC GCTCAAATTACCCTAGCCGCAGCGCTAACCTAGGTGAACGACGCTCGAGT TAAGCTAGCCGCAGCACTAGTCTACGAAACCTCTTCGGTGCACGACCGCC ATCCCCTACCTTATCCCATCCTTCAATGTCGGCTGATGCATTGGTGTAGA CGTCATATACTCTATATAGTTGTGTTATACTAGGCCACGGTAGTTTCTTA GTCTACTATGACTTGGCTATGGTTTGAAACTCGTGGAACATGGTGGGGTT TAAGAGAGCCAGAGGGGATGAATGTCACGCCTTCCTGTGTGGCATATAGC TGCATTTCAGAGGCAAGCTACCATCCTATGAGCAAAGGGTAGCTTTTGAA GTATCCATACCTACTCTTAAATGGGTCTGATTTTTTTTCTCAAAATGAAG TAATGTCATTGCTTTGATGTAGAAATGCAGGGGTGAACTAAAACATCAAA GGAAAAGGGCTCAGATTTCGACTTACGAGAAAGATATCTATGAAACCTGC TTCAATGGCAGGAATATCTGAGTCATTCTGATAACCTGGCGAAGCGGTTT TTTTTAATTCAAGACCATTCGAAAGCTTAACAAACAAAATGAACCTTCTT TACAGCTGAGGAAAAGAGCGAGAAATCGTGTTTTGGAAAGAAAAACAAGA ATTCCCTTTTGGTTCTCAAAATTTAAGGGCAATCGCTTTGCTCAACACTT TTTAATCCAAACGGTTCTTTTAATAGTGCAATGGCCATTGTGCTGTATCG TTTTTCAAACCTCCCGATGAAGAAATGCATACAAGCGAACGCATTGAGTA TCCTTTAAAAGCCCGTATGAAAAGGTCTTTGTATGTTCGTATTGTAAGAC CAAAGATCAAAAATAAAACCTATATACTTACTATTTACTATATAATACTA TATACTAGATACTTTAAAAAGGAACCACTGCGGACAATCAACTGATTGGC TTGCCCTCCACCTTCACCCTTAAGTACGAGGTGGTTACGGAAACAAACAG GAATTTGCAATTTACGGCCAAAATATTGGGCGATTAGAAATAATTGTTCA TCAAGATTTATTGACAAGAAAATCCCCAATGACATAGCCTTTTACAGCCC GTCAAAAAGTCGCCCGCGTTGATGGTTCTGTTGACCTGCGCCAAGTTGTT TTTTTCATAGCTCTCTCGGGTAATCTTGTTTTCTATCAAGATCTGATTTT ACTCCGAGCAATGAAAGAAAGTGTTCAGGTGCCAAACTTGGAGAGTAATG TGGGTGAGGGGCCGTTTGACTGTCATTTTTGAGAAAGATGACCCCCAATT TTGGCCTAATGAAGTTACTAGCCTTCCCTCCTCAATCAGTTGAGCGCTTT GACCTTGAGGAGTTGAGGGCTCATCGGAAACTGAAGAGGATGCCCCCTGT ATTCAGAGCACTGATCTTGGTCCTCTTGACTGATCTTAGTCCTCTTGAGT GTGTGTTATCGCACCTTCCGGTGGTTTCGTGTTCCACACCATGGAACTTC CATGGTGAACACAGGGCCCACTTGATGTTATTAGCTAATTTAGCTAGTCA GTGTGCAGCCCCGTACAATCCAGTCGCAACCACTACTTTAATTTGTGAGA AACCAGAAGGGACCCTACCTCAAGGTGTGGGCGCACCTGTGTTCCTGACC CCCAAGGACTAGTACAGGGTTACAGGGAGTCGTCCGCTCCCCTCAGTAGA AGAATGTCTGAAGTGGCGTGTGTGTCTGTGTGCTATCGCAACTTCTGGTG GTTTCGTGTTCCACACCATGGAACCTCCATGGTGAACACAAGGCCCACTT GATGTTATTAGATATTTTAGCTAGTCAGCGTGCAGCCCCTACAACCCAGC ACAAACCACTACTTTAATTCGTGGGGAATCAGAAGGGACCCGTCCTCAAG TTGTGGCTGCACCTGCGTATTATCATTGGTTTAAATTCCTCCCTGAAAAT GCTGTTTTTATCTATCACCTTTTGGACTTTTCAGCCTTTGGCAGGTTAAC AACCAAGTCAAAACTGCTATTACTGCAAAACGGGAGCGGATACGACGAAG GCGCTGTACTCAAGCAAGAGTAGCAGCGTAGCTATTGTAAAAATACTGTT TAAATGCCAAGACACCAGTTTCAAACCTAAAATTGATAGCAGATGATTTT TCCTTTTCTCTCAAAACCTCTCCAATGCACGGTTTGGCCATGAATTGGAC ATTCTATCTTGTTCCCGTAACCACCTCGTACTCCACGGCGGAAGTTTTCG TTTCCCTTCGTAAATGTGTCTCGCCCAAATCACCATACTCGTACATTGCC CCAAGCAGTGGGGCTTCATTAGATCGCAGGAATACTGTCACCATTGGACT TTGAAGGCGCTGAATGTAAATCATTTACTCATGCATACAGCGCCTTTAGT GAACATTAGCGTGCTGGTGCACATCAAGACACTCAAATACGCAAAAATTG GCTGTTTTATGAACGACTTGTCCTTTCAGACGGAAGGCCCGAATGTTATG GCCAGTGGCCCAGAGTTGGTTTCACTCCAGTCCCCAGCGATGCGACATCA TGGAGTTCTTCGAGAAGGAGGACAATTGGGGCAAGAACAAGGTGTATGTG GGTCGCTCCTGGCTCAAGGACGAGCTGAGGCTCAGGGGCAATGAGGAGCT GCACAAGCTTTGGTATGTGTTGCTCAAGGAGCGCAACCGATTGCTCACCC TCGAGCACTTGTGCAAGCAAGAAGTCCTGCCCATGCCCAATGAGGAGCGC CTGGACAAGGTGGACATCTCCATGGAGAACCTGGAGGAGGTGGTGAGAGA GCGAAATCGCGCCTACTGGGAACTGGAGGTGGGCGAATCGGGGGAGCAAG AGCGACAAGTCCTGGAGGACTCGACCTTCGCCATGGAGGAGGAGTACATC ACCCAAGAGCACACCGTCCCCTTCGAGCTCAATGAGGAGCATCGGGAAAT GTACAAGCAACGCTTCTGGACTGGGCTGGATGATGATTCCCGGGTCTTCT ACCGGCGCATGAGAGAGCAAGCTTATCAAGACATGAAGCAAAAGAAATAG TAAGTAACCCTTGGCGAATAGTACTTCCCCCAGGCTTCGATGGGAACACG TTCTTCATCTCAAACCACCCAGCACTAGCGCAGATTGCTAGGGATGGAGT AATTTTAGAAGAGGGGGGTTGGATGTGATGTTTCTTGGAGGTGTGCGTGT GTTTTAATATAGGTTCATGCCCGGGGATCCTTAATACTTAGATACTTAGC CAACAAATGCTACTTAAGAGTGTAAGGCACTTTATAACGAAATCTATGCA AGCATTAATGGTACGACTACGATACAAAAACATCACAGTACTGTACGTAC ATGAACAGAAGTACCTAGCAAAGACATAACCGAACAATAACAAAACTAAT TAAAACACAAGATCATATTTACAAAATAAAATCAAACAAAACCAAGCAAA ACTATACAAAACAGAATTACCGATATTCAGAACGATATGTATTTGTGGCA TGCTTAAAAATGTCATATATAACTTGATTTTAGTATCAACGGCCCTTGAC AAAAATTTTTTAAAATAATGAGAAATGATTTAAATAATTAATGGCCAATG CCTTTGTATTCATTATTTATCCTGCTATGTATTAATGAAATGCAAAGCCA AGCAAGTTGTGTTAATTCATTGCCTTCCAAATGTCTAGTCGTAATTGTTC ATTAGTCCATTATTACCTCGGTCTACCTATTTATCGCAAAGCATAAGTTT ACTAATTTTGTGCTCTTTTTCAGTCGGGATATGCGAGATGGTGCCCGAGT TCTGAGACGATTCCCCAATGTGGACGAAGAAGCGTTACAAGAGAAATATC CGAATGCTTCAGTGGAAGAGATGAAGCGTTACAAAGATGCCTTGGGCAAT CGGGCCAATCTCAGTGTCGATTTCTAATTATTATCAATACAAACCTTTAT GTAGTAGTGATTGCTCGATCAGAGTGTCGATTGCCTGAAATTGTCGTCGG AACTAATGGTTCTGAAACCACCCACTCTAAATATTTTATCGATTTTTGAC TGATTCGATTGTGTTTCTGGGTTGGGTTCGATTCTGC
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk08344
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