---NA---, maker-scaffold531_size145796-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview
Name---NA---
Unique Namemaker-scaffold531_size145796-snap-gene-0.24
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000002862 (supercontig:LSalAtl2s:LSalAtl2s16595:2:760:1 gene:EMLSAG00000002862 transcript:EMLSAT00000002862 description:"augustus-LSalAtl2s16595-processed-gene-0.0")

HSP 1 Score: 83.5741 bits (205), Expect = 2.733e-20
Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   16 FPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKTDGNIGPDFQEGLLELRNTPSPVGK-SLAAIVFG 83
            F +WG+ HRLS+  FPQSNGLAESAVK+IKA LLKT       FQEGLLELRNTP   G  S + IVFG
Sbjct:   82 FARWGIAHRLSSPHFPQSNGLAESAVKSIKALLLKTGNTESEAFQEGLLELRNTPLRHGSLSPSQIVFG 150          
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000006569 (supercontig:LSalAtl2s:LSalAtl2s35:845590:849230:1 gene:EMLSAG00000006569 transcript:EMLSAT00000006569 description:"snap_masked-LSalAtl2s35-processed-gene-8.19")

HSP 1 Score: 67.3958 bits (163), Expect = 1.939e-15
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
Query:   16 FPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKTDGNIGPDFQEGLLELRNTPSPVGKSL-AAIVFGHL 85
            F +WG+ HR+S+  F QS  LAESAVK+IKA LLK        FQEGL EL+NTP   G  +   IVFG +
Sbjct:   23 FARWGISHRVSSPHFCQSIRLAESAVKSIKARLLKAGNTDSEAFQEGLFELKNTPLRQGSLIPVQIVFGII 93          
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000004669 (supercontig:LSalAtl2s:LSalAtl2s24318:3:443:1 gene:EMLSAG00000004669 transcript:EMLSAT00000004669 description:"augustus-LSalAtl2s24318-processed-gene-0.0")

HSP 1 Score: 62.3882 bits (150), Expect = 3.709e-13
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   32 QSNGLAESAVKAIKAFLLKTDGNIGPDFQEGLLELRNTPSPVGK-SLAAIVFG 83
            QSNGLAESAVK+IKA LLKT       FQEGLLELRNTP   G  S + IVFG
Sbjct:    1 QSNGLAESAVKSIKALLLKTGNTESEAFQEGLLELRNTPLRHGSLSPSQIVFG 53          
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000011218 (supercontig:LSalAtl2s:LSalAtl2s768:187911:188209:-1 gene:EMLSAG00000011218 transcript:EMLSAT00000011218 description:"maker-LSalAtl2s768-snap-gene-1.12")

HSP 1 Score: 50.8322 bits (120), Expect = 2.203e-9
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   16 FPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT 51
            F +WG+  RLS+  FPQSNGLAES +K+IKA +LKT
Sbjct:   40 FARWGIALRLSSLLFPQSNGLAESVIKSIKAPVLKT 75          
BLAST of ---NA--- vs. nr
Match: gi|338224374|gb|AEI88069.1| (polyprotein-like protein, partial [Scylla paramamosain])

HSP 1 Score: 74.3294 bits (181), Expect = 4.956e-14
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   16 FPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNIGPD-FQEGLLELRNTPSPVGKSLAAIVFGH---LSDPDHHHTSLQ 96
              +WGV HR+S+  +P+SNG AE+AVK++K  +L T   G++  D F  GLLELRNTP   G+S A ++FGH      P HH +  Q
Sbjct:    5 LARWGVEHRVSSPHYPRSNGHAEAAVKSVKKLILTTTQQGHLDEDAFARGLLELRNTPRAEGRSPAQVLFGHPMRSCVPAHHRSYAQ 91          
BLAST of ---NA--- vs. nr
Match: gi|1061467646|gb|ODM88365.1| (hypothetical protein Ocin01_18317 [Orchesella cincta])

HSP 1 Score: 75.0998 bits (183), Expect = 1.232e-12
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    7 RLKTPKTSSFPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNIGPD-FQEGLLELRNTPSPVGKSLAAIVFGH 84
            +L +   S   +WG++H  S+  +PQSNGLAESAVKA+K  L KT   G++  + FQ GLLELRNTP   G+S A +VFG 
Sbjct:  325 KLMSDNGSVLLKWGIKHTTSSPHYPQSNGLAESAVKAVKYLLAKTSPSGDLENEAFQLGLLELRNTPRADGRSPAQMVFGQ 405          
BLAST of ---NA--- vs. nr
Match: gi|1191047158|ref|XP_020901236.1| (uncharacterized protein K02A2.6-like, partial [Exaiptasia pallida])

HSP 1 Score: 68.1662 bits (165), Expect = 2.688e-10
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    3 DYNPRLKTPKTSSFPQ-WGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT---DGNIGPD-FQEGLLELRNTP-SPVGKSLAAIVFG 83
            D  P+L   +T +F + WGVRHR+S+A FPQSNG AE AVK  K  L+      GN+  D F   +L+LRNTP +    S A I+FG
Sbjct:  240 DGGPKLTAGRTEAFLKLWGVRHRISSAYFPQSNGRAEVAVKTAKRLLMSNTGPSGNLDDDRFLRAILQLRNTPDADCNISPAQIIFG 326          
BLAST of ---NA--- vs. nr
Match: gi|999974563|gb|KXJ13737.1| (Uncharacterized protein K02A2.6, partial [Exaiptasia pallida])

HSP 1 Score: 68.1662 bits (165), Expect = 2.891e-10
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    3 DYNPRLKTPKTSSFPQ-WGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT---DGNIGPD-FQEGLLELRNTP-SPVGKSLAAIVFG 83
            D  P+L   +T +F + WGVRHR+S+A FPQSNG AE AVK  K  L+      GN+  D F   +L+LRNTP +    S A I+FG
Sbjct:  240 DGGPKLTAGRTEAFLKLWGVRHRISSAYFPQSNGRAEVAVKTAKRLLMSNTGPSGNLDDDRFLRAILQLRNTPDADCNISPAQIIFG 326          
BLAST of ---NA--- vs. nr
Match: gi|1022759008|gb|KZS05415.1| (Uncharacterized protein APZ42_031433 [Daphnia magna])

HSP 1 Score: 67.0106 bits (162), Expect = 8.901e-10
Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 0
Query:   16 FPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNIGPD-FQEGLLELRNTPSPVGKSLAAIVFGH--LSDPDHHHTSL----QHIVPLSPTSPNRIQRSHPRYQEQVMGQTRNNSLTRPKQRLTSQAAIR 143
            F +WGV    ST  +PQSNG AE+A KA+K  + K   +G++  D FQ+GLLE RNTP   G S A IVFGH   S    HHT+     + ++ L    PN+  + +          T+N  LTR  +++ S    R
Sbjct:  925 FEKWGVTSVNSTPHYPQSNGHAEAAGKAMKNLVQKAALNGHLDTDAFQQGLLEWRNTPREAGLSPAEIVFGHPIRSILPAHHTAFASKWRELMDLG--KPNQENKEY----------TKNTELTRFNKKIISWQHCR 1049          
BLAST of ---NA--- vs. nr
Match: gi|1022712236|gb|KZR95993.1| (Uncharacterized protein APZ42_009921, partial [Daphnia magna])

HSP 1 Score: 65.0846 bits (157), Expect = 1.304e-9
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   14 SSFPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNI-GPDFQEGLLELRNTPSPVGKSLAAIVFGH 84
            ++  +WGV    ST  +PQSNG AE+AVK +K  +LK    G++   +F  GLLE RNTP   G S A IVFGH
Sbjct:   12 ATLKRWGVSWGNSTTHYPQSNGHAEAAVKTVKELVLKLAPSGDLSSEEFLAGLLEFRNTPHATGLSPAQIVFGH 85          
BLAST of ---NA--- vs. nr
Match: gi|1061482737|gb|ODN00004.1| (Transposon Tf2-6 polyprotein [Orchesella cincta])

HSP 1 Score: 66.6254 bits (161), Expect = 1.480e-9
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   11 PKTSSFP------QWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNIGPD-FQEGLLELRNTPSPVGKSLAAIVFG 83
            P+ SSF       +WG+ H  S+  +PQ+NGLAES VKA    + KT  +G++  D FQ GL+ELRNTP   G+S A +VFG
Sbjct: 1085 PQFSSFEFKNWVQKWGIVHDPSSPHYPQANGLAESGVKAASHLIAKTSPNGDLTTDAFQLGLMELRNTPRADGRSPAELVFG 1166          
BLAST of ---NA--- vs. nr
Match: gi|999968040|gb|KXJ07214.1| (Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia pallida])

HSP 1 Score: 66.2402 bits (160), Expect = 2.119e-9
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    3 DYNPRLKTPKTSSFPQ-WGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT---DGNIGPD-FQEGLLELRNTPSP-VGKSLAAIVFG 83
            D  P      T +F + WG++HRLS+A FPQSNG AE AVK  K  L+      GN+  D F + +L+LRNTP P    S + IVFG
Sbjct:  661 DGGPEFTAACTEAFLRHWGIQHRLSSAHFPQSNGRAEVAVKTAKRLLMSNTGPSGNLNHDSFLQAMLQLRNTPDPDCNLSPSEIVFG 747          

HSP 2 Score: 66.2402 bits (160), Expect = 2.119e-9
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    3 DYNPRLKTPKTSSFPQ-WGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT---DGNIGPD-FQEGLLELRNTPSP-VGKSLAAIVFG 83
            D  P      T +F + WG++HRLS+A FPQSNG AE AVK  K  L+      GN+  D F + +L+LRNTP P    S + IVFG
Sbjct: 1280 DGGPEFTAACTEAFLRHWGIQHRLSSAHFPQSNGRAEVAVKTAKRLLMSNTGPSGNLNHDSFLQAMLQLRNTPDPDCNLSPSEIVFG 1366          
BLAST of ---NA--- vs. nr
Match: gi|1022752700|gb|KZS01941.1| (Uncharacterized protein APZ42_001222, partial [Daphnia magna])

HSP 1 Score: 64.6994 bits (156), Expect = 2.280e-9
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   14 SSFPQWGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKT--DGNI-GPDFQEGLLELRNTPSPVGKSLAAIVFGH 84
            ++  +WGV    ST  +PQSNG AE+AVK +K  +LK    G++   +F  GLLE RNTP   G S A IVFGH
Sbjct:   12 AALKRWGVSWGNSTTHYPQSNGHAEAAVKTVKELVLKLAPSGDLSSEEFLAGLLEFRNTPHATGLSPAQIVFGH 85          
BLAST of ---NA--- vs. nr
Match: gi|736221719|ref|XP_010780048.1| (PREDICTED: uncharacterized protein LOC104954597 [Notothenia coriiceps])

HSP 1 Score: 64.3142 bits (155), Expect = 2.950e-9
Identity = 39/85 (45.88%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    6 PRLKTPKTSSFPQ-WGVRHRLSTAEFPQSNGLAESAVKAIKAFLLKTDGNIG----PDFQEGLLELRNTPSP-VGKSLAAIVFGH 84
            P  K   T  F + W VRHR+S+  FPQSNG AE AVK  K  L+   G  G      F   +L+LRNTP P    S A I+FGH
Sbjct:   35 PEFKASHTEDFLRLWHVRHRVSSVSFPQSNGRAEVAVKTAKRLLMSNTGASGSLDQDRFLRAMLQLRNTPDPDCDLSPAQIIFGH 119          
The following BLAST results are available for this feature:
BLAST of ---NA--- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAG000000028622.733e-2065.22supercontig:LSalAtl2s:LSalAtl2s16595:2:760:1 gene:... [more]
EMLSAG000000065691.939e-1552.11supercontig:LSalAtl2s:LSalAtl2s35:845590:849230:1 ... [more]
EMLSAG000000046693.709e-1367.92supercontig:LSalAtl2s:LSalAtl2s24318:3:443:1 gene:... [more]
EMLSAG000000112182.203e-963.89supercontig:LSalAtl2s:LSalAtl2s768:187911:188209:-... [more]
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BLAST of ---NA--- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of ---NA--- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|338224374|gb|AEI88069.1|4.956e-1445.98polyprotein-like protein, partial [Scylla paramamo... [more]
gi|1061467646|gb|ODM88365.1|1.232e-1250.62hypothetical protein Ocin01_18317 [Orchesella cinc... [more]
gi|1191047158|ref|XP_020901236.1|2.688e-1047.13uncharacterized protein K02A2.6-like, partial [Exa... [more]
gi|999974563|gb|KXJ13737.1|2.891e-1047.13Uncharacterized protein K02A2.6, partial [Exaiptas... [more]
gi|1022759008|gb|KZS05415.1|8.901e-1037.96Uncharacterized protein APZ42_031433 [Daphnia magn... [more]
gi|1022712236|gb|KZR95993.1|1.304e-948.65Uncharacterized protein APZ42_009921, partial [Dap... [more]
gi|1061482737|gb|ODN00004.1|1.480e-947.56Transposon Tf2-6 polyprotein [Orchesella cincta][more]
gi|999968040|gb|KXJ07214.1|2.119e-945.98Transposon Ty3-I Gag-Pol polyprotein [Exaiptasia p... [more]
gi|1022752700|gb|KZS01941.1|2.280e-948.65Uncharacterized protein APZ42_001222, partial [Dap... [more]
gi|736221719|ref|XP_010780048.1|2.950e-945.88PREDICTED: uncharacterized protein LOC104954597 [N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold531_size145796supercontigscaffold531_size145796:53574..54155 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold531_size145796-snap-gene-0.24-mRNA-1maker-scaffold531_size145796-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold531_size145796:53574..54155-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold531_size145796-snap-gene-0.24 ID=maker-scaffold531_size145796-snap-gene-0.24|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=582bp|location=Sequence derived from alignment at scaffold531_size145796:53574..54155- (Tigriopus kingsejongensis)
ATGGTGGACTACAATCCACGTCTCAAGACGCCCAAGACTTCCTCTTTCCC CCAATGGGGAGTACGCCATCGATTGTCAACGGCAGAGTTTCCCCAGTCAA ACGGGTTGGCCGAGTCAGCCGTCAAGGCCATAAAGGCTTTTTTGCTCAAA ACGGACGGTAACATTGGTCCGGATTTCCAGGAGGGACTCTTAGAATTACG GAACACCCCAAGTCCTGTAGGTAAAAGCCTGGCTGCCATCGTTTTCGGCC ACCTCTCCGATCCAGAGTTCCCGCCCACCATCGCTCTTTCGCCCCTGAGA GGATCAAAAGACAGCTAATCTCGCAGCCACCACCACACCTCGTTACAACA CATCGTCCCGCTGTCTCCCACCTCTCCAAATCGGATCCAACGCTCGCATC CAAGATACCAAGAGCAAGTTATGGGACAGACTCGGAATAATTCTCTCACG CGGCCGAAACAGAGACTAACGAGTCAAGCTGCCATCAGGCATCTGGAGAA ATCGCCGCTTTCTCCGACCTCTCAAGGAAACCCTGCCAGAGGACACACCT CCCGATGTGGAGGAACCCGATCGCCCCGATAA
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Synonyms
The feature '---NA---' has the following synonyms
Synonym
Tk12611
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