coiled-coil domain-containing protein 77, maker-scaffold547_size140190-snap-gene-0.22 (gene) Tigriopus kingsejongensis

Overview
Namecoiled-coil domain-containing protein 77
Unique Namemaker-scaffold547_size140190-snap-gene-0.22
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of coiled-coil domain-containing protein 77 vs. L. salmonis genes
Match: EMLSAG00000004191 (supercontig:LSalAtl2s:LSalAtl2s221:347464:350507:-1 gene:EMLSAG00000004191 transcript:EMLSAT00000004191 description:"maker-LSalAtl2s221-snap-gene-3.19")

HSP 1 Score: 87.4261 bits (215), Expect = 1.860e-20
Identity = 63/221 (28.51%), Postives = 114/221 (51.58%), Query Frame = 0 
Query:    5 ELESRQKVFALLEICGKTDNDITRLLSQAHGREPPAAFIPERIKEYIKLDRKRLSGRQIQRGSDSLRLEVLALENQLLAQERCHLEQVAMLEEDKRNLRLSQDENRRGFEAQFESVAQRVTDLQASQDELTEALGKTRSKYRQNERQWTHDKEVLLRKLQFIQHYGCD---RDPEEAGFYTGQRSLFRLGGEPQFRRKIEKLTAELMEHKQLVDGYKSRLL 222
            ELE R+K+ AL+ I GK+  DI ++L            IP  ++ YI  +  + S R   +  D+L LE+     QL+ QE+ HLEQ++ L+ + R+L+   D   + +E + E  ++ + +L+    +L +   + + K+ Q E  W  +KE  +RK+QF++ YG +    + +   FYT +R + R        + +  +  EL + K   D Y+S++L
Sbjct:  115 ELEXRRKIQALVHIAGKSQGDIAKVLD-TQELSLDMIPIPSELQRYID-ENPKPSPRIPTK--DALVLELSVASKQLVDQEKLHLEQISNLKNEIRSLKKKNDCIVKHYETRLEDCSRSLINLERVHKDLAKDFVQEKEKFHQCESTWEKEKEKWIRKVQFLEQYGTNVPGMNVDAGAFYTSKRVVDRKMSNNN--KALHDVNRELKDMKVSCDSYRSKIL 329
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BLAST of coiled-coil domain-containing protein 77 vs. nr
Match: gi|225713122|gb|ACO12407.1| (Coiled-coil domain-containing protein 77 [Lepeophtheirus salmonis])

HSP 1 Score: 87.8113 bits (216), Expect = 1.032e-16
Identity = 63/221 (28.51%), Postives = 115/221 (52.04%), Query Frame = 0 
Query:    5 ELESRQKVFALLEICGKTDNDITRLLSQAHGREPPAAFIPERIKEYIKLDRKRLSGRQIQRGSDSLRLEVLALENQLLAQERCHLEQVAMLEEDKRNLRLSQDENRRGFEAQFESVAQRVTDLQASQDELTEALGKTRSKYRQNERQWTHDKEVLLRKLQFIQHYGCD---RDPEEAGFYTGQRSLFRLGGEPQFRRKIEKLTAELMEHKQLVDGYKSRLL 222
            ELE+R+K+ AL+ I GK+  DI ++L            IP  ++ YI  +  + S R   +  D+L LE+     QL+ QE+ HLEQ++ L+ + R+L+   D   + +E + E  ++ + +L+    +L +   + + K+ Q E  W  +KE  +RK+QF++ YG +    + +   FYT +R + R        + +  +  EL + K   D Y+S++L
Sbjct:  101 ELENRRKIQALVHIAGKSQGDIAKVLD-TQELSLDMIPIPSELQRYID-ENPKPSPRIPTK--DALVLELSVASKQLVDQEKLHLEQISNLKNEIRSLKKKNDCIVKHYETRLEDCSRSLINLERVHKDLAKDFVQEKEKFHQCESTWEKEKEKWIRKVQFLEQYGTNVPGMNVDACAFYTSKRVVDRKMSNNN--KALHDVNRELKDLKVSCDSYRSKIL 315
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BLAST of coiled-coil domain-containing protein 77 vs. nr
Match: gi|1236534960|gb|PAA58812.1| (hypothetical protein BOX15_Mlig012048g2, partial [Macrostomum lignano] >gi|1236566084|gb|PAA87819.1| hypothetical protein BOX15_Mlig012048g1, partial [Macrostomum lignano])

HSP 1 Score: 61.6178 bits (148), Expect = 2.337e-7
Identity = 62/261 (23.75%), Postives = 126/261 (48.28%), Query Frame = 0 
Query:    1 LQIQELESRQKVFALLEICGKTDNDITRLLSQAHGREPP-AAFIPERIK----------------------EYIKLDRKRLSGRQIQRGSDSLRLEVLALENQLLAQERCHLEQVAMLEEDKRNLRLSQDENRRGFEAQFESVAQRVTDLQASQDELTEALGKTRSKYRQNERQWTHDKEVLLRKLQF----IQHYGCDRD--------PEEAGFYTGQRSLFRLGGEPQFRRKIEKLTAELMEHKQLVDGYKSRLLRSRD 226
            L+I+EL+ R+K+  LL+I G +D+++T  L     +EPP  A +P+++                       E ++     L    + R  DSLRL++ +L++QL  Q +   EQV  L ED+R   +  D +R   + + + +A ++   Q    + T+ L + R  ++Q E+ W  +K  LL++++      Q+   +R+          EA +   ++S        + R++++ L  +L +  +L D Y+ +++++ D
Sbjct:  160 LKIKELQDRKKMAHLLQISGVSDSEVTYFL-----KEPPDVAVVPQKLPGQVQQAAKSANPQLLRAAQALPEALRKTVPALEHEAVLRECDSLRLQLHSLQSQLEEQAKLSKEQVNALMEDRRIRAMEADSSRDRDQDKIKELADKLKRAQEMLQDSTKDLLEQRKVHKQAEKTWIQEKARLLQEIETRRPRYQNTPSERERLRQLVSGQAEASWAKAEQSAV----VDELRQQVKTLEYQLQQQTELADMYREQVVQAED 411
[Close]
BLAST of coiled-coil domain-containing protein 77 vs. nr
Match: gi|1236557373|gb|PAA79525.1| (hypothetical protein BOX15_Mlig012048g4, partial [Macrostomum lignano])

HSP 1 Score: 61.2326 bits (147), Expect = 2.566e-7
Identity = 62/261 (23.75%), Postives = 126/261 (48.28%), Query Frame = 0 
Query:    1 LQIQELESRQKVFALLEICGKTDNDITRLLSQAHGREPP-AAFIPERIK----------------------EYIKLDRKRLSGRQIQRGSDSLRLEVLALENQLLAQERCHLEQVAMLEEDKRNLRLSQDENRRGFEAQFESVAQRVTDLQASQDELTEALGKTRSKYRQNERQWTHDKEVLLRKLQF----IQHYGCDRD--------PEEAGFYTGQRSLFRLGGEPQFRRKIEKLTAELMEHKQLVDGYKSRLLRSRD 226
            L+I+EL+ R+K+  LL+I G +D+++T  L     +EPP  A +P+++                       E ++     L    + R  DSLRL++ +L++QL  Q +   EQV  L ED+R   +  D +R   + + + +A ++   Q    + T+ L + R  ++Q E+ W  +K  LL++++      Q+   +R+          EA +   ++S        + R++++ L  +L +  +L D Y+ +++++ D
Sbjct:  160 LKIKELQDRKKMAHLLQISGVSDSEVTYFL-----KEPPDVAVVPQKLPGQVQQAAKSANPQLLRAAQALPEALRKTVPALEHEAVLRECDSLRLQLHSLQSQLEEQAKLSKEQVNALMEDRRIRAMEADSSRDRDQDKIKELADKLKRAQEMLQDSTKDLLEQRKVHKQAEKTWIQEKARLLQEIETRRPRYQNTPSERERLRQLVSGQAEASWAKAEQSAV----VDELRQQVKTLEYQLQQQTELADMYREQVVQAED 411
The following BLAST results are available for this feature:
BLAST of coiled-coil domain-containing protein 77 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000041911.860e-2028.51supercontig:LSalAtl2s:LSalAtl2s221:347464:350507:-... [more]
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BLAST of coiled-coil domain-containing protein 77 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of coiled-coil domain-containing protein 77 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 3
Match NameE-valueIdentityDescription
gi|225713122|gb|ACO12407.1|1.032e-1628.51Coiled-coil domain-containing protein 77 [Lepeopht... [more]
gi|1236534960|gb|PAA58812.1|2.337e-723.75hypothetical protein BOX15_Mlig012048g2, partial [... [more]
gi|1236557373|gb|PAA79525.1|2.566e-723.75hypothetical protein BOX15_Mlig012048g4, partial [... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold547_size140190supercontigscaffold547_size140190:637..4131 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold547_size140190-snap-gene-0.22-mRNA-1maker-scaffold547_size140190-snap-gene-0.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold547_size140190:637..4131+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold547_size140190-snap-gene-0.22 ID=maker-scaffold547_size140190-snap-gene-0.22|Name=coiled-coil domain-containing protein 77|organism=Tigriopus kingsejongensis|type=gene|length=3495bp|location=Sequence derived from alignment at scaffold547_size140190:637..4131+ (Tigriopus kingsejongensis)
ATCTATCGATGGCTATAACTCGTGGACCACTTGATTGCAGATCCAAGAGT
TGGAGTCCCGCCAAAAGGTCTTTGCGCTCCTGGAGATTTGCGGGAAAACC
GATAACGACATCACGCGACTCTTGTCCCAAGCCCATGGGCGCGAGCCTCC
GGCCGCGTTCATCCCCGAGCGGATCAAGGAGTACATCAAACTCGACCGGG
TAAAGCTGGTCCCGGACTAGTTTATTTCTATCCTCTTCATTCTACTACTG
TCTATATTCAAATCACGCCCACATCGATTACCCCCGGATCTAGAAACGCT
TGAGCGGTCGCCAGATCCAGCGCGGCTCGGACAGTCTGCGCCTCGAGGTC
CTGGCTTTGGAGAATCAGCTCCTGGCGCAGGAGCGTTGCCATTTGGAGCA
AGTGGCCATGCTGGAGGAGGATAAGCGCAATTTGAGGTTGAGCCAAGACG
AGAACCGACGCGGGTTCGAGGCCCAGTTCGAGTCGGTGGCCCAGCGGTAA
GTGGGCTGTCGGACAGGCGACGAGTCCCCAGGGCGCGTCTAACTCCCCCG
TGTCCCCCTAGCGTGACCGACCTGCAGGCCAGTCAGGACGAGCTAACCGA
GGCCTTGGGGAAGACTCGCTCAAAGTATCGGCAAAATGAGCGCCAATGGA
CCCACGACAAGGAAGTCCTCCTGCGCAAGCTCCAGTTCATTCAACACTAC
GGCTGCGACCGGGATCCCGAGGAGGCCGGCTTTTACACCGGTCAGAGGTC
CCTATTTCGCCTCGGTGGCGAGCCTCAATTCCGGCGGAAAATCGAAAAAC
TCACGGTAAGCGCAAGGAGGTTCACTGAGTAAGCGCACTCCGAGTGCCGA
TCCAGTCCCAGTTTGCTCTCGACCCTTGGCCATGGGCCGAACGGAAGCGG
CCTTCATAACTATTCGGATCAGGCTTAACAGGTCGTGGGTGTGTGACACA
CTGAAACCTTATTTATTGCGTCCGAAAGCCAGTCAGTGGGCCAAAAATCG
GCTAATGGTCCCAGTTTGTTGGTCTTGGACCGATACTGGGCTATTTGGCC
CATCGCATTTCATTCATGGCGCCGAAATGGCGGTACTGCGTGCAGTCATT
GACGCGAAATTCGGGTTCGGTTTGCAAATTTCAGTGTCCCACTTGAGCAC
AAGGCTTTTTTTACCATGAGATAGGGATCTTAGCCTGTAAAGTGGCCAAC
AGCGACCACTCTTTGAAATTATCACCCCATGCAAGTGCGGTAAAAACCTC
TTCGTTTCGTCCAGCTGGCTCATGTACTCGAAGTAAGTGTAAGTGAGTCC
ACGCGCTTCTCAAATTGGCTTCAACCTGCCAATGTTATCTTGAAAAACGG
CTTCATGCTCCTCCGAATTGTTTTCACAGAGGGAAAGCTGATATTCACTT
CCATCATAAACCAAGCCATTAAACAGTTGAGCTTGTGTCCTTGTGGTAGG
GTTCATTAAAGGCTCATGCATGGTAAAATGGCACACTGCCAGAGGCAGGC
TGTTTTCTGAGTAGTTCAATTTATACTAAAAGGTAACGCTCTCGGTCGTG
TTCAGTCGTCGCCTCATCGCAACCGAACCCAGTTCGAAAGTGGTTCTTCC
GAGTTGAGATCAACCAAACGGCCTGCATCTGGCATTTCCAGTCTGCCATT
ATACCGTGTATATAGTCGATTACCTTAGCTACTAGCTGTTTGTGCTTGTC
TCGGACTTGTTTCACTTTTGCTCCATACCCGTTGCTGGTTTGCTGGTCCC
GTGATTTGCACCGCAAGGTTAATCCATGATAACTTGATAACGCAGTCGGA
ATAAAGTGCTTCTCATGGCTGGCTGGCAGGCTGATATTCTCGCAACCTGA
AATTAGGGAGGCACCAAAACTCGTTGGAGTCGAGATTCTCGAATGCTTCT
ATTCAAGTACACCTTGGAACTGGCAGAGCATTGCAATGGTAACTTCTCAA
TTCTTCACCATATCGTGGTTCTTTGAAAGCCCAAACTTTCAAAAAGTACC
GGCTCCTTTTTCAATTAACTTGTGTCCTTAAACCCAACTACACGATCCTT
CAGAGATATGGATTTCTATGCGATTGAGTGGCTCCTTTGAGCCGAGACAT
ATACAGGCATTAAGTACAGTACAACGGTGGTGTAGCGGCCTGCGAGTCGA
CTGCTCTGATTGGGTCACTCGCAGAAATCTTTCTAAATATATCATATCGA
CCTCTGAATAAAACTACTCAATTACCATCTCCCGACTCGGTAGGAGCCAA
CCTCCTACAGTGGAGCCATTCTAGTGGGGTAATTCATAGAGTGCGAACCC
TCAAGGTGGAGGAGAGGGCTCAATCGATCGGCTGATAACCGTTCCGATGT
ATTTCTCCTCTTTATCTTCTGCTTGTCTCTGGGTCAATTTTTGTACTTCC
CTTGCAACATAGAAATCATCGAATTCTGGATATTTCTGTTTTCCAATTGG
TCCATTTTAGCGAAGTAGCGTGCTTTTAAACGCGGTCTGACAGATCTCTT
TTACGTGATCGTACTCGTACATCGAGAGGGTTGTGAAGGAGGAAAACCCT
ACTGTCATTGTTGTAACCTTTGAACCACATTCGGTTCCTCCAAAGCGCCT
TAATATGACCAAAATTTCGGTCAACTTATCAGGAAATAAAATACAAGACG
TAAATCATATTTACAACAAGTTTGGGCCCAAACAGGGCAAACATTTTTCA
AATCGCCGAGATATGACTCAAAACTAGATAAATCTAATTCACTATATTTC
TTTCTTTCCCAAACTTCTGACCAGAATCTGCACTTGCAGTACAGTGTGTG
TCATCGTTTATTTCCTGCTTAGTAAGATTTGGTATACTGTACGTATGCCC
GGGAGTCAACACTTAGCAAACGAATGCTAGTCAATAGTGTTAGGGCCATT
TATAAGTATATACACATGTTAGTAGTAACGCAAAACAACGATATAAGAAC
CTACTACGTATACTCTAAACTGTACGAAACAAAAGAACAGAATAATGGAG
AAATATATGTCATTGTTGTAACCTTTGAACCACATTCGGTTCAAAACTGA
ACAAAGCAATTGCGCCCAAATTTGAAAGAGTGTCCAACTAGAACTACGAA
CTGTCGATGTTTCAAGTGTATATGTGATTTGCTGAAGAAAAAAAAGCGGC
GGCCTACAACCTTAACCCCGCCATGTGATATGCAGTTATGTGTTATTTTG
TTATTTCTTAAGCTTTCCAAGCCAGTAGACATCGCATCTCGTACCGTACG
ATCTTTCGAATTATTGTTAGGTTTCAAACCCTGAGGAGTAGTTGCCATTC
AAGAACGATTGCTCCCCCCAAACACTGCTGTAATTATAGTATGCAGGCCG
AGATTGGCACCCGACCCTTAAAAATGAAACAAGTGAAGGCTCATCCCAAC
TCAAAATGGGTGGTTATTTCCAGGCCGAGCTCATGGAGCACAAACAACTG
GTGGATGGCTACAAGTCTCGACTCCTCAGGAGTCGAGACTTGTAG
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Synonyms
The feature 'coiled-coil domain-containing protein 77' has the following synonyms
Synonym
Tk03230
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