hypothetical protein, maker-scaffold559_size137194-snap-gene-0.28 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein
Unique Namemaker-scaffold559_size137194-snap-gene-0.28
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000012084 (supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1 gene:EMLSAG00000012084 transcript:EMLSAT00000012084 description:"augustus_masked-LSalAtl2s864-processed-gene-0.1")

HSP 1 Score: 65.4698 bits (158), Expect = 5.603e-14
Identity = 50/156 (32.05%), Postives = 75/156 (48.08%), Query Frame = 0
Query:    6 LGTAGGLLLSRLGNRGN-RGRGSRRRG-SYRGRGYRNGRDVDSVLNSVDYDVADPDMDEALVYLRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCT---KSTQEILNE 156
            +G  GGL+ SR G R N R R  +  G ++R  G++N R   S             +DE    L +A+Q D   C K+++C VN    +++  +E   +   +F  D    LD     V+ DLAA+IGK  G + C ++Y RC    K   EI N+
Sbjct:   47 VGFVGGLI-SRGGRRRNYRPRYHQNFGYNHRHHGFQNYRFKRS-------------LDEYETILLSAAQNDASDCAKRLVCEVNGTPLENFSKEET--MIARLFNPD---HLDITKITVEFDLAAQIGKRVGIEQCAVLYERCPHDKKKLMEIFND 183          
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000012083 (supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1 gene:EMLSAG00000012083 transcript:EMLSAT00000012083 description:"maker-LSalAtl2s864-augustus-gene-0.14")

HSP 1 Score: 61.2326 bits (147), Expect = 2.361e-12
Identity = 40/125 (32.00%), Postives = 60/125 (48.00%), Query Frame = 0
Query:   31 GSYRGRGYRNGRDVDSVLNSVDYDVADPDMDEALVYLRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEILN 155
            G+  GRG R+  D++S+L S                   ASQ D   C KK++C VN     + +  E + I   +F  D    LD +   V+ DLAA+IGK  G + C +IY RC  + Q+++ 
Sbjct:   78 GAIIGRGKRSAIDLESLLLS-------------------ASQRDFSDCAKKLVCEVNGLSRAE-IESEXAMI-AALFNADS---LDLSKATVEFDLAAQIGKRVGKEQCAVIYERCPHNRQKLMK 178          
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000012085 (supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1 gene:EMLSAG00000012085 transcript:EMLSAT00000012085 description:"maker-LSalAtl2s864-augustus-gene-0.15")

HSP 1 Score: 58.9214 bits (141), Expect = 1.148e-11
Identity = 33/96 (34.38%), Postives = 50/96 (52.08%), Query Frame = 0
Query:   60 MDEALVYLRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEILN 155
            +DE    L +ASQ D   C KK++C V+    +D   +E   +   +F  D    LD     V+ DLAA+IGK  G   C +IY RC  S +++++
Sbjct:   76 IDEFESVLLSASQHDASDCAKKLVCEVSGLTLEDMNSEET--MIARLFNPD---HLDVTKATVEFDLAAQIGKRVGIQQCSVIYERCPHSRRQLID 166          
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007339 (supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gene:EMLSAG00000007339 transcript:EMLSAT00000007339 description:"snap_masked-LSalAtl2s414-processed-gene-0.6")

HSP 1 Score: 58.5362 bits (140), Expect = 3.485e-11
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0
Query:   67 LRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEILN 155
            L +ASQ D   C KK++C V+    +D   +E   +   +F  D    LD     V+ DLAA+IGK+ G   C +IY RC  S +++++
Sbjct:  124 LLSASQHDASDCAKKLVCEVSGLTLEDINSEET--MIARLFNPD---HLDVTKATVEFDLAAQIGKHVGIQQCSIIYQRCPHSRRKLID 207          
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007341 (supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1 gene:EMLSAG00000007341 transcript:EMLSAT00000007341 description:"maker-LSalAtl2s414-snap-gene-1.9")

HSP 1 Score: 53.9138 bits (128), Expect = 1.131e-9
Identity = 26/88 (29.55%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   67 LRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRCTKSTQEIL 154
            L +ASQ D + C K+++C ++        P+E      ++    +++ LD +   V+ +LAA+IGK  G + C +IY RC  S  +++
Sbjct:   90 LLSASQEDQNDCAKRLVCEISSLPPTAMSPEEI-----QIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRCPHSKAKLM 172          
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007336 (supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 gene:EMLSAG00000007336 transcript:EMLSAT00000007336 description:"maker-LSalAtl2s414-augustus-gene-0.14")

HSP 1 Score: 49.6766 bits (117), Expect = 7.002e-8
Identity = 24/80 (30.00%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   67 LRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRC 146
            L ++SQ D + C K+++C ++        P+E      ++    +++ LD +   V+ +LAA+IGK  G + C +IY RC
Sbjct:  305 LLSSSQEDQNDCTKRLVCEISSLPPTAMSPEEI-----QIASVFNSNYLDISKATVEFELAAQIGKRVGLEQCLVIYKRC 379          

HSP 2 Score: 48.9062 bits (115), Expect = 1.674e-7
Identity = 24/80 (30.00%), Postives = 43/80 (53.75%), Query Frame = 0
Query:   67 LRTASQLDIDSCMKKMICSVNDPKADDYVPDENSNIFQEVFGGDDNSQLDYASKIVDLDLAAEIGKNAGADHCGLIYSRC 146
            L +ASQ D + C K+++C ++         +E      ++    +++ LD +   V+ +LAA+IGK  G + C +IY RC
Sbjct:  106 LLSASQEDQNDCAKRLVCEISSLPPTAMSLEEV-----QIASAFNSNYLDISKATVEFELAAQIGKRVGLEQCSVIYKRC 180          
The following BLAST results are available for this feature:
BLAST of hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 6
Match NameE-valueIdentityDescription
EMLSAG000000120845.603e-1432.05supercontig:LSalAtl2s:LSalAtl2s864:141096:141668:1... [more]
EMLSAG000000120832.361e-1232.00supercontig:LSalAtl2s:LSalAtl2s864:105123:106860:1... [more]
EMLSAG000000120851.148e-1134.38supercontig:LSalAtl2s:LSalAtl2s864:165170:165932:1... [more]
EMLSAG000000073393.485e-1134.83supercontig:LSalAtl2s:LSalAtl2s414:6177:7412:1 gen... [more]
EMLSAG000000073411.131e-929.55supercontig:LSalAtl2s:LSalAtl2s414:99526:112093:-1... [more]
EMLSAG000000073367.002e-830.00supercontig:LSalAtl2s:LSalAtl2s414:24152:55376:1 g... [more]
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BLAST of hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold559_size137194supercontigscaffold559_size137194:42584..43409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold559_size137194-snap-gene-0.28-mRNA-1maker-scaffold559_size137194-snap-gene-0.28-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold559_size137194:42584..43409-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold559_size137194-snap-gene-0.28 ID=maker-scaffold559_size137194-snap-gene-0.28|Name=hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=826bp|location=Sequence derived from alignment at scaffold559_size137194:42584..43409- (Tigriopus kingsejongensis)
GGAATGTTGCCAAAGCTGCCTTGGGTGGTATCTTGCTGGGCACCGCTGGA GGCTTGCTCTTATCCAGGCTTGGCAATCGCGGAAATCGTGGACGAGGCTC TCGACGTCGAGGATCCTACCGAGGTCGAGGTTACCGAAACGGCCGCGACG TGGATTCCGTCCTGAACAGTGTCGATTACGACGTGGCAGATCCGGATATG GACGAGGCATTGGTCTATTTGCGGACGGCTTCCCAATTGGACATTGACAG CTGCATGAAGAAAATGATTTGCAGCGTCAACGATCCCAAAGCCGATGACT ATGTCCCAGTAAGGCCGAAAATACTTCAAGGTTGTTATGTTATTTCTTAT CACTTGGTTTCCATTGACGATTTAAGGACGAAAACTCGAATATCTTCCAA GAGGTGTTTGGCGGGGACGATAATTCTCAATTGGATTATGCTTCGAAGAT TGTGGACCTGGACTTGGCCGCCGAGATTGGGAAGAACGCAGGTGCGGATC ACTGCGGATTGATCTACTCCAGATGTACCAAAAGTACCCAGGAGATTCTG AACGAAATGCACGAGGCCGAGAAACTGATTCTGGCCGAGGCCGAGGGAAA CTTGACTTCCATTTGAGTGAAAAAATATACATCCGTGTCCATTCGCGATT CAAGCACTGAGGTGATCACTTCTTTTCGGGTTGCTCTGTCACAGGAGAGC AGTATCAGTCATTGAGCCAATGGATGTTGATCAATGACCAAGTGAAGCTA ATTTGGGTAAATCAGCATTTTTGAACTAAACAAGTGTACAGATGCAATTC TTGACCGAAGCAGTTTTTCATAGTCA
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Synonyms
The feature 'hypothetical protein' has the following synonyms
Synonym
Tk04624
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