replication factor c subunit 1, maker-scaffold55_size446313-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of replication factor c subunit 1 vs. L. salmonis genes
Match: EMLSAG00000012251 (supercontig:LSalAtl2s:LSalAtl2s893:96950:102673:1 gene:EMLSAG00000012251 transcript:EMLSAT00000012251 description:"maker-LSalAtl2s893-augustus-gene-0.10") HSP 1 Score: 491.886 bits (1265), Expect = 7.962e-161 Identity = 272/576 (47.22%), Postives = 356/576 (61.81%), Query Frame = 0 Query: 291 DLENPQEPSQ--LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGG---AKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARA-SESK-MTGIEAKAEANKAKKTSIKV----------------GPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIV-LPYSSSLGTIKKSRVGVASEIDVDAMDEEEV-VESDEEDDNDITKDTMIKAKTKRAPAARG 807 D +P+EP + LWV+KYKP NLK IIGQQGD+SNMRKL+ WL+NWS+Y+ G K P RP PW + D+G WAK ALLSG VGKTTTA LV +ELGFDIMELNASD RSKK L+ N+ AL++ SL++ S RVLLMDEVDGMAGNEDRGG+A LI L+K S+IP +MMSI FKEK+ ++PDA+ ELI GCN DVRQVLH+L+++KAR+ S SK +T EA+ EA+ +KKTSIK+ GP+DV +KVFS++EQ SL DKSDLFF D+S+GPLF QENYLS TP+AAN D K M+L+S ++DS C+GD+V IRS+NAW LLP A++SSV+PGE Y++G P+ GA+GI S+ M+ YSL REDLD+L+E + WP +E+P+K ++SK K+AFTRTYNKE+ LPY+ S KK + I D++ E++ E + E++ DIT D MIKAKT+++ +++ Sbjct: 412 DTFSPKEPCESLLWVDKYKPMNLKNIIGQQGDRSNMRKLLEWLRNWSKYNENGPNKQKPPPRPSPWATAGDNGGWAKCALLSG---VGKTTTASLVCKELGFDIMELNASDGRSKKSLDTNVKEALSSRSLSKISAKRVLLMDEVDGMAGNEDRGGIAALILLLKSSKIPVICMCNDRNHEKIRSLANHCFDLRFQRPRLEQIKASMMSICFKEKIKVSPDAMAELITGCNNDVRQVLHNLTMLKARSNSNSKALTKTEAEKEASTSKKTSIKMVSFIAVFIFIFILILKGPWDVCKKVFSSQEQKSMSLYDKSDLFFYDFSIGPLFIQENYLSVTPDAANKDRKKTMELISLSSDSLCNGDLVEKTIRSKNAWNLLPVNAIYSSVLPGE----YMSG-----------------------------------------------------PLRKNGAQGIPASIKVMEAYSLQREDLDSLIEYTSWPDKEDPMKSVESKVKSAFTRTYNKEVSNLPYAISQTNTKK-----KTNISFDSLSTEDIDDEGESENEEDITSDAMIKAKTRKSSSSKN 922
BLAST of replication factor c subunit 1 vs. L. salmonis genes
Match: EMLSAG00000013027 (supercontig:LSalAtl2s:LSalAtl2s999:31594:34416:-1 gene:EMLSAG00000013027 transcript:EMLSAT00000013027 description:"maker-LSalAtl2s999-snap-gene-0.20") HSP 1 Score: 77.7962 bits (190), Expect = 7.325e-15 Identity = 44/140 (31.43%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQ-YHTGGAKA-----PARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTS-LARDSKNRVLLMDEVDGM 433 LWVE YKP++ ++ D + R L+ W++ W + KA RP P ++ LL GPPG+GKTT A++++R G++ +E+N+SD R+ + + A+ S L+ +SK +++DE+DG+ Sbjct: 158 LWVETYKPSHFMHLLS---DDTINRSLLQWMKLWDKMVFNKPVKADLIDETHRPAP-----------RIVLLHGPPGIGKTTLAHILARHAGYNPIEINSSDDRTISAFKSKVXPAIQMQSVLSVESKPNCIIIDEIDGV 283
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|56757608|sp|P35251.4|RFC1_HUMAN (RecName: Full=Replication factor C subunit 1; AltName: Full=Activator 1 140 kDa subunit; Short=A1 140 kDa subunit; AltName: Full=Activator 1 large subunit; AltName: Full=Activator 1 subunit 1; AltName: Full=DNA-binding protein PO-GA; AltName: Full=Replication factor C 140 kDa subunit; Short=RF-C 140 kDa subunit; Short=RFC140; AltName: Full=Replication factor C large subunit) HSP 1 Score: 486.108 bits (1250), Expect = 5.832e-155 Identity = 265/569 (46.57%), Postives = 357/569 (62.74%), Query Frame = 0 Query: 274 KLAPEPTRSAPAMPLSQDLENPQEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSL---------ARDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQ-AGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVL-PYSSSLGTIKKSRVGVASEIDVDAMDE--EEVVESDEEDDNDITKDTMI 795 ++A E + + A L+ D + + LWV+KYKPT+LK IIGQQGD+S KL+ WL+NW + + K A+ + +D G+ K ALLSGPPGVGKTTTA LV +ELG+ +ELNASD+RSK L+ ++ +L NTS+ + S L+MDEVDGMAGNEDRGG+ ELI LIK ++IP GAMMSI FKE + I P A+ E+I+G NQD+RQVLH+LS+ AR+ +T +AKA++++AKK IK+GPFDV RKVF+A E+ A SL+DKSDLFF DYS+ PLF QENY+ P AA GD K + L+S+AADS CDGD+V + IRS+ W LLP QA+++SV+PGE M GY+ FP+W GK+S K DRI+Q+L +H L SK +NMD+ LRDA+V P+ +G +G+ + V M Y L++ED +N+ME+S W + +P +D K KAAFTR YNKE L PY SL IK SR + +D + +E E+ +SDE+D + I D MI Sbjct: 558 QVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSSEDKKHAAKFGKFSGKDD-GSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKA--LTYDQAKADSHRAKK-DIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPY--SLQAIKASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMI 1120
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|12644230|sp|P35600.2|RFC1_DROME (RecName: Full=Replication factor C subunit 1; AltName: Full=Activator 1 140 kDa subunit; AltName: Full=Activator 1 subunit 1; AltName: Full=Germline transcription factor 1; AltName: Full=Replication factor C large subunit) HSP 1 Score: 476.093 bits (1224), Expect = 7.668e-153 Identity = 262/593 (44.18%), Postives = 354/593 (59.70%), Query Frame = 0 Query: 272 RVKLAPEPTRSAPAMPLSQDLENPQEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA--------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVLPYSSSLGTIKKSRVGVASEIDVDAMDE---EE------VVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGG 813 +VK P + P P + DL+ WV+K+KPT++K I+GQ G SN+ KLM WL W H G K P RP PW A ND G++ K ALLSGPPG+GKTTTA LV +ELGFD +E NASD+RSK+LL+ +S L+N SL+ S+ VL+MDEVDGMAGNEDRGGM ELI LIK S IP G +MSI FKEKV I+P + E+I N D+RQ ++H++L+ A+ S+ +G + + +K+GP++VVRKVF+A E S DKSDLFF DYSL PLF Q+NYL P+ G+ K V+ V+ AD+ GD+V IR+ +AW LLPTQA FSSV+PGE+M G+ GQI FP W GK S+ K R+ QEL HTR+ S+ ++ +D+ L D IV P+ G EG+ ++D MK Y LLREDLD+L+E++ WP +++PL +D + KAA TR+YNKE V+ YS S K + A+ D D +DE EE + ++ED +++ D++IKAK KR ++ A+GG Sbjct: 393 KVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKPTSIKEIVGQAGAASNVTKLMNWLSKWYVNHDGNKK-PQRPNPW-AKNDDGSFYKAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKEDASQKSGQQVATK-------DLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQQNYLQVLPQ---GNKKDVLAKVAATADALSLGDLVEKRIRANSAWSLLPTQAFFSSVLPGEHMCGHFTGQINFPGWLGKNSKSGKRARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNIVRPLAKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKE-VMAYSYSAQAGIKKKKSEAAGADDDYLDEGPGEEDGAGGHLSSEEDEDKDNLELDSLIKAK-KRTTTSK---ASGG 968
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|1703056|sp|P35601.2|RFC1_MOUSE (RecName: Full=Replication factor C subunit 1; AltName: Full=A1-P145; AltName: Full=Activator 1 140 kDa subunit; Short=A1 140 kDa subunit; AltName: Full=Activator 1 large subunit; AltName: Full=Activator 1 subunit 1; AltName: Full=Differentiation-specific element-binding protein; AltName: Full=ISRE-binding protein; AltName: Full=Replication factor C 140 kDa subunit; Short=RF-C 140 kDa subunit; Short=RFC140; AltName: Full=Replication factor C large subunit) HSP 1 Score: 476.093 bits (1224), Expect = 2.903e-151 Identity = 261/554 (47.11%), Postives = 342/554 (61.73%), Query Frame = 0 Query: 296 QEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWG--ASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQ-AGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVL-PYSSSLGTIKKSRVGVASEIDVDAMDE--EEVVESDEEDDNDITKDTMIKAKTK 800 +E LWV+KYKP +LK IIGQQGD+S KL+ WL+NW H + +G AS D G+ K ALLSGPPGVGKTTTA LV +ELG+ +ELNASD+RSK L+ ++ +L NTS+ S L+MDEVDGMAGNEDRGG+ ELI LIK ++IP AM+SI FKE + I P A+ E+I+G NQDVRQVLH+LS+ A++ +T +AKA++ +AKK I++GPFDV RKVF+A E+ A SLMDKSDLFF DYS+ PLF QENYL P AA GD K + L+S+AADS CDGD+V IRS+ W LLPTQA+++SV+PGE M GY+ FP+W GK+S K DRI+Q+L +H L SK +NMD+ +RDA+V P+ +G EG + M Y L++ED +N+MEVS W + + +D K KAAFTR YNKE L PY SL +K SR+ +D + +E E+ +S++E D + D MIK KT+ Sbjct: 564 KEECLLWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNW---HKSSPEEKKHAAKFGKLASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQSKA--LTYDQAKADSQRAKK-DIRLGPFDVTRKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDNQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFPSWLGKHSSTGKHDRIVQDLSLHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGAQHVIKLMDTYYLMKEDFENIMEVSSWGGKPSAFSKLDPKVKAAFTRAYNKEAHLTPY--SLQVVKTSRLSTGPALDSEYSEEFQEDDTQSEKEQDA-VETDAMIKKKTR 1108
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|584899|sp|P38630.1|RFC1_YEAST (RecName: Full=Replication factor C subunit 1; Short=Replication factor C1; AltName: Full=Activator 1 95 kDa subunit; AltName: Full=Cell division control protein 44) HSP 1 Score: 280.411 bits (716), Expect = 1.446e-80 Identity = 182/568 (32.04%), Postives = 281/568 (49.47%), Query Frame = 0 Query: 296 QEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA-----------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRK-----VFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRS-RNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWP-LQENPLKMIDSKSKAAFTRTYNKEIVLPYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEE----DD-------NDITKDTMIKAKTK 800 +E +LW KY PTNL+ + G +G ++ KL WL NW K A D + A+L GPPG+GKTT A+LV++ELG+DI+E NASD RSK LL + AL N S+ + K+ V++MDEVDGM+G DRGG+ +L Q +K+ P +M+I +EK + P+ + LI D+RQV++ L+ ++ +K E E +KA + +I + PFD+ K ++S +L DK L+F D+ PL QENYLS P ++ ++ V++AA+ GD+V IRS W LLP A+ SSV P ++G++ G+I F W G+ S+ K+ R+LQE+ HTRL K L +D+ + R +++P + +GA+ I+ ++ M Y L +ED D++ME + P + +K I + K+ FTR YN + + ++ + G D E+VV++D+ DD D+ KD +IK K K Sbjct: 292 REEDKLWTVKYAPTNLQQVCGNKG---SVMKLKNWLANWENSKKNSFKH--------AGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGG-DRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVIN---LLSTISTTTKTINHENINEISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLNDKIALYFDDFDFTPLMIQENYLSTRPSVLKPG-QSHLEAVAEAANCISLGDIVEKKIRSSEQLWSLLPLHAVLSSVYPASKVAGHMAGRINFTAWLGQNSKSAKYYRLLQEIHYHTRLGTSTDKIGLRLDYLPTFRKRLLDPFLKQGADAISSVIEVMDDYYLTKEDWDSIMEFFVGPDVTTAIIKKIPATVKSGFTRKYNS---MTHPVAIYRTGSTIGGGGVGTSTSTPDFEDVVDADDNPVPADDEETQDSSTDLKKDKLIKQKAK 840
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|30913227|sp|O60182.1|RFC1_SCHPO (RecName: Full=Replication factor C subunit 1; Short=Replication factor C1) HSP 1 Score: 273.863 bits (699), Expect = 9.999e-78 Identity = 185/563 (32.86%), Postives = 294/563 (52.22%), Query Frame = 0 Query: 297 EPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA----------RDSKNR-VLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSA---KEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAV-----MDLVSKAADSFCDGDVVSALIRS-RNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSL-WPLQENPLKMIDSKSKAAFTRTYNKE---IVLPYSSSLGTIKKS------RVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMI 795 +PSQ+W KY PT+LK I G +G ++KL WLQ+ YH +P P D K LLSGPPG+GKTT A+LV++ G+D++ELNASD+RSK+LL++ + + SLA +K+R VL+MDE+DGM+ DRGG+ +L +IKKS IP +MSI ++E + ++P A+ +L+ G D+RQ+++ LS K SE MT ++A ++K I + P+D+ + + ++ DK +L+F D+ L QENYL+ TP+ +P + ++L+S AA+SF D D+V ++I + W L+PT A+ S V P +++G + QI+F W G S+ NK R+L+E+Q+H RL +K L + L +++ + ++ + E ++ M +Y L RED D++ E+ L E +K I + +K+AFTR YN I SS + +K S V A E + + ++E E+ E+D D++KD I Sbjct: 356 QPSQIWTSKYAPTSLKDICGNKG---VVQKLQKWLQD---YHKNRKSNFNKPGP-----DGLGLYKAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLDEQLFGVTDSQSLAGYFGTKANPVDMAKSRLVLIMDEIDGMSSG-DRGGVGQLNMIIKKSMIPIICICNDRAHPKLRPLDRTTFDLRFRRPDANSMRSRIMSIAYREGLKLSPQAVDQLVQGTQSDMRQIINLLSTYKLSCSE--MTPQNSQAVIKNSEK-HIVMKPWDICSRYLHGGMFHPSSKSTINDKLELYFNDHEFSYLMVQENYLNTTPDRIRQEPPKMSHLKHLELISSAANSFSDSDLVDSMIHGPQQHWSLMPTHALMSCVRPASFVAGSGSRQIRFTNWLGNNSKTNKLYRMLREIQVHMRLKVSANKLDLRQHYIPILYESLPVKLSTGHSDVVPEIIELMDEYYLNREDFDSITELVLPADAGEKLMKTIPTAAKSAFTRKYNSSSHPIAFFGSSDVLPMKGSAQREVPDVEDAIEAEDEMLEEASDSEAANEEDIDLSKDKFI 903
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|74853625|sp|Q54MH9.1|RFC1_DICDI (RecName: Full=Probable replication factor C subunit 1; AltName: Full=Activator 1 subunit 1) HSP 1 Score: 227.254 bits (578), Expect = 1.276e-60 Identity = 143/495 (28.89%), Postives = 239/495 (48.28%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSK----KLL-----EQNIS--VALTNTSLARDSK-----NRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAV-MDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAG--LSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTY 742 LWVEKY+P ++ I+G G ++ WL W+ + AP + LLSGPPG+GKT+ A L+ ++ GF+ +ELNASD+RSK +LL QNI+ TN +D + +++DE+DG +GN DRGG+AE+I LIKKS++P +++I E + ++ + ++ + D+RQ ++ L +M + + ++ + PF + + ++ K D FF D+SL PL QENYL P K +L+S AAD+ D D I AW LLPT + S +IP Y+ G + FP++ GKYS +K R ++ELQ+H R ++ ++++ + + L+ ++ P++ +GI ++ M +Y L +D +N++E+S W +E+PLK + ++ K+AFTR + Sbjct: 850 LWVEKYRPKVIEDIVGNPG---IFQEFGKWLDQWN------STAPR----------DASKKNAVLLSGPPGIGKTSAALLICKQKGFEAIELNASDARSKSEIKRLLSGVSDNQNITKFFGTTNQDTGKDVQANKKIKTAIILDEIDGSSGNSDRGGIAEIIGLIKKSKMPFICLCNDYYSSKVTSLRNHCMDLKLRKPTLNQVSSRLLAIAKHEGMKVSSYMIEKVYTSSHSDIRQSINTLQMMSRSKRDYNNDNV-----TQSLQEKDFDISPFTAAELIL---REDNSNINKKLDYFFSDFSLVPLIIQENYLKTRPYGGGSQSKYNDCELISMAADALSDSDQFGRAIGKEMAWNLLPTYGVTSCIIPSGYIRGSPPMPLSFPSYLGKYSNASKQQRFVRELQLHMRSTSNTFVNRDETRLYYVPMLKHHLIQPLVQDDNDGIENVINVMDEYGLTEDDRNNIIELSTWG-KEDPLKDVKTQVKSAFTRKF 1316
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|75168909|sp|Q9C587.1|RFC1_ARATH (RecName: Full=Replication factor C subunit 1; Short=AtRFC1; AltName: Full=Activator 1 large subunit; AltName: Full=Activator 1 subunit 1) HSP 1 Score: 217.238 bits (552), Expect = 7.141e-58 Identity = 194/617 (31.44%), Postives = 283/617 (45.87%), Query Frame = 0 Query: 297 EPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVAL------------TNTSLARD---SKN--RVLLMDEVDGMAGNEDRGGMAELI-------------------QLIK---------------KSQIPGAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMD-KSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQ-------FPTWFGKYSRQNKFDRILQELQMHTRLS--AGLSKEALNMDFCQSLRDAIVNPM-ILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYN-----KEIVLPYSSSLGTIKKS---RVGVASEIDVDAM---------DEEEVVESD-EEDDNDITKDTMIKAKTKRAPAARGKAAAGGESSSSTGSRGGKGKGKGRGK 833 E S W EKY+P I+G Q L+T L NW + ND+G+ K LLSG PG+GKTT+A LVS+ LGF +E+NASDSR K NI+ + N ++A + SK+ VL+MDEVDGM+ DRGG+A+LI Q +K K Q+ +M I E + I AL EL N D+R ++ L M S K I + ++ AK I PF V K+F GK MD + DL D L PL QENYL+ P + D MDL+++AA+S DGD+++ IR W L + + SS++P + G Q F W GK S K R++++L +H S + +E L +D+ L + +P+ L E ++E VD M YS+ +ED D ++E+ + +ENP++ + KAA T+ YN + + + L +KK+ R+ E VD++ D EE SD EED + T +++ K A + + + S+GSR GKG+GRGK Sbjct: 337 ETSLPWTEKYRPKVPNEIVGNQS-------LVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGS-KKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKA--NSNIAKGIGGSNANSVKELVNNEAMAANFDRSKHPKTVLIMDEVDGMSAG-DRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLSS-AKDEDI--SPFTAVDKLFGY--NGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRP--SGKDEAKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGK 935
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|122248776|sp|Q2R2B4.2|RFC1_ORYSJ (RecName: Full=Replication factor C subunit 1; Short=OsRFC1; AltName: Full=Activator 1 large subunit; AltName: Full=Activator 1 subunit 1) HSP 1 Score: 210.69 bits (535), Expect = 1.986e-55 Identity = 184/580 (31.72%), Postives = 267/580 (46.03%), Query Frame = 0 Query: 302 WVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNW-SQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSK-----------------KLLEQNISVALTNTSLARDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMD-KSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAV--MDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQI---------QFPTWFGKYSRQNKFDRILQELQMHTRLS--AGLSKEALNMDFCQSLRDAIVNPM-ILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNK----EIVLPYSSSLGTI------KKSRVGVASEIDVDAMDEEEVV---ESDEEDDNDI-TKDTMIKAKTK 800 W EKY+P I+G Q S +++L WL++W Q+ G K + DSGA K LLSGPPG+GKTTTA +VS+ LG +E+NASDSR K K L N ++ +N L R VL+MDEVDGM+ DRGG+A+LI IK S+IP +M I KE + +A+ EL + D+R L+HL M S K I + ++ + + PF V K+F G+ MD + DL D L PL QENY++ P D V M+ +++AA+S D D+V+ IR W L + SS++P M G N +I +F W GKYS NK R+L++ H S A L +E+L +D+ L + +P+ + E + + V+ M YSL +ED D ++E+S + NP+ I K+A T+ Y + +V ++ L I K RV E +++ EE V E DEED +D D ++ TK Sbjct: 408 WTEKYRPKVPNDIVGNQ---SMVKQLHDWLRSWEDQFLHSGQKGKGK-----KQADSGA-KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYSNNRLKR--PKAVLVMDEVDGMSAG-DRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQRLNSSTKDED---ISPFTAVDKLFGF--NGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHG--NREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKAYKQGSSSRVV--RAADLVNIPGMKKPLKKRVAAILEPVGESLPEENGVASSEGDEEDSSDAENNDELVPGDTK 966
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|166977385|sp|A6VIW1.1|RFCL_METM7 (RecName: Full=Replication factor C large subunit; Short=RFC large subunit; AltName: Full=Clamp loader large subunit) HSP 1 Score: 110.153 bits (274), Expect = 4.723e-24 Identity = 57/154 (37.01%), Postives = 93/154 (60.39%), Query Frame = 0 Query: 302 WVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP 455 WVEKY+P +L + G K + L+ W++++ +G K LL+GPPG GKTT AY ++++ FD++ELNASD R+K ++ Q + A T+ SL K ++++DEVDG++GN+DRGG+AE+I+++K ++ P Sbjct: 4 WVEKYRPKSLNDVAGHNKTKES---LIEWIESFI---------------------NGQKQKPILLAGPPGSGKTTLAYAIAKDYAFDVIELNASDKRNKDVISQVVGTAATSKSLT--GKRTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENP 131
BLAST of replication factor c subunit 1 vs. SwissProt
Match: gi|226739139|sp|A9A6N2.1|RFCL_METM6 (RecName: Full=Replication factor C large subunit; Short=RFC large subunit; AltName: Full=Clamp loader large subunit) HSP 1 Score: 108.227 bits (269), Expect = 1.692e-23 Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 0 Query: 302 WVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP 455 WVEKY+P +L + G K L+ W++++ SG K LL+GPPG GKTT AY ++++ +D++ELNASD R+K ++ Q + A T+ S+ + ++++DEVDG++GN+DRGG+AE+I+++K ++ P Sbjct: 4 WVEKYRPKSLNDVAGHNKTKET---LIEWIESFV---------------------SGQKQKPILLAGPPGSGKTTLAYAIAKDYAYDVIELNASDKRNKDVISQVVGTAATSKSIT--GRRTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENP 131
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1227975861|ref|XP_021919426.1| (replication factor C subunit 1 isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 545.814 bits (1405), Expect = 3.283e-178 Identity = 290/561 (51.69%), Postives = 374/561 (66.67%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKE-IVLPYSSSLGTIKKSRVGVASEIDVDAMDE-EEVVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGGESS 816 LW +KYKP + K IIGQQGD+SN++KL++WLQ W H+G K RP PW A +D+G + K ALLSGPPGVGKTTT +LV +ELGFDI+E NASD+RSKKLL + +S L+N SL+ + ++N VL+MDEVDGMAGNEDRGGM ELIQLIK ++P GAMMSI +KE + I P+AL ++I G N D+RQVLHHLS+ + + ++ AK E++KAKK IK+GP+DV++KVFSA S+ DKSDLFF DYSLGPLF QENYLS P G+ K ++LV++ A+S GD+V IRSRNAW LLPTQAM SSV+PG M G+L QI FP W GK SR++KF+R+LQEL MH RLS SKEA+N+D+ LRD++V+P+I G +G+A ++ M+ Y LLRED+D+LME+SLWP Q++PL ++SK KAAFTRT NKE I+ PY S+ IKKS + D+ + +E + EED+ DITKD MIK K K+ PAA A GG S Sbjct: 330 LWADKYKPLSTKQIIGQQGDRSNVKKLVSWLQGWHSNHSGKKKL-VRPSPW-AKDDTGNFFKAALLSGPPGVGKTTTVHLVCKELGFDIVEFNASDTRSKKLLHEEVSELLSNKSLSGYFQGAAARKPTENHVLVMDEVDGMAGNEDRGGMQELIQLIKSCRVPVICMCNDRHHQKIRSLTNYCFDLQFSRPRVEQIRGAMMSICYKEGIKIHPEALNDIITGANHDIRQVLHHLSMWSVK--DKHLSTERAKEESHKAKK-DIKLGPWDVLKKVFSADAHKTMSIHDKSDLFFHDYSLGPLFVQENYLSVMPHKVRGNRKRHLELVAQTAESLSTGDIVEKSIRSRNAWSLLPTQAMLSSVLPGHIMEGHLTSQISFPAWLGKNSRRSKFERLLQELHMHMRLSISGSKEAVNLDYLTHLRDSVVSPLINNGLDGVAATIHIMQNYYLLREDIDSLMEISLWPNQKDPLSCVNSKVKAAFTRTVNKEGIMTPY--SVINIKKSASKFNQDSDIVGDGQDDENGDEVEEDEEDITKDAMIK-KAKKRPAAVNDHAPGGSGS 882
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1227975857|ref|XP_021919424.1| (replication factor C subunit 1 isoform X1 [Zootermopsis nevadensis] >gi|646716376|gb|KDR19656.1| Replication factor C subunit 1 [Zootermopsis nevadensis]) HSP 1 Score: 546.969 bits (1408), Expect = 2.772e-177 Identity = 290/561 (51.69%), Postives = 374/561 (66.67%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKE-IVLPYSSSLGTIKKSRVGVASEIDVDAMDE-EEVVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGGESS 816 LW +KYKP + K IIGQQGD+SN++KL++WLQ W H+G K RP PW A +D+G + K ALLSGPPGVGKTTT +LV +ELGFDI+E NASD+RSKKLL + +S L+N SL+ + ++N VL+MDEVDGMAGNEDRGGM ELIQLIK ++P GAMMSI +KE + I P+AL ++I G N D+RQVLHHLS+ + + ++ AK E++KAKK IK+GP+DV++KVFSA S+ DKSDLFF DYSLGPLF QENYLS P G+ K ++LV++ A+S GD+V IRSRNAW LLPTQAM SSV+PG M G+L QI FP W GK SR++KF+R+LQEL MH RLS SKEA+N+D+ LRD++V+P+I G +G+A ++ M+ Y LLRED+D+LME+SLWP Q++PL ++SK KAAFTRT NKE I+ PY S+ IKKS + D+ + +E + EED+ DITKD MIK K K+ PAA A GG S Sbjct: 433 LWADKYKPLSTKQIIGQQGDRSNVKKLVSWLQGWHSNHSGKKKL-VRPSPW-AKDDTGNFFKAALLSGPPGVGKTTTVHLVCKELGFDIVEFNASDTRSKKLLHEEVSELLSNKSLSGYFQGAAARKPTENHVLVMDEVDGMAGNEDRGGMQELIQLIKSCRVPVICMCNDRHHQKIRSLTNYCFDLQFSRPRVEQIRGAMMSICYKEGIKIHPEALNDIITGANHDIRQVLHHLSMWSVK--DKHLSTERAKEESHKAKK-DIKLGPWDVLKKVFSADAHKTMSIHDKSDLFFHDYSLGPLFVQENYLSVMPHKVRGNRKRHLELVAQTAESLSTGDIVEKSIRSRNAWSLLPTQAMLSSVLPGHIMEGHLTSQISFPAWLGKNSRRSKFERLLQELHMHMRLSISGSKEAVNLDYLTHLRDSVVSPLINNGLDGVAATIHIMQNYYLLREDIDSLMEISLWPNQKDPLSCVNSKVKAAFTRTVNKEGIMTPY--SVINIKKSASKFNQDSDIVGDGQDDENGDEVEEDEEDITKDAMIK-KAKKRPAAVNDHAPGGSGS 985
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1227975859|ref|XP_021919425.1| (replication factor C subunit 1 isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 545.814 bits (1405), Expect = 2.854e-177 Identity = 290/561 (51.69%), Postives = 374/561 (66.67%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKE-IVLPYSSSLGTIKKSRVGVASEIDVDAMDE-EEVVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGGESS 816 LW +KYKP + K IIGQQGD+SN++KL++WLQ W H+G K RP PW A +D+G + K ALLSGPPGVGKTTT +LV +ELGFDI+E NASD+RSKKLL + +S L+N SL+ + ++N VL+MDEVDGMAGNEDRGGM ELIQLIK ++P GAMMSI +KE + I P+AL ++I G N D+RQVLHHLS+ + + ++ AK E++KAKK IK+GP+DV++KVFSA S+ DKSDLFF DYSLGPLF QENYLS P G+ K ++LV++ A+S GD+V IRSRNAW LLPTQAM SSV+PG M G+L QI FP W GK SR++KF+R+LQEL MH RLS SKEA+N+D+ LRD++V+P+I G +G+A ++ M+ Y LLRED+D+LME+SLWP Q++PL ++SK KAAFTRT NKE I+ PY S+ IKKS + D+ + +E + EED+ DITKD MIK K K+ PAA A GG S Sbjct: 405 LWADKYKPLSTKQIIGQQGDRSNVKKLVSWLQGWHSNHSGKKKL-VRPSPW-AKDDTGNFFKAALLSGPPGVGKTTTVHLVCKELGFDIVEFNASDTRSKKLLHEEVSELLSNKSLSGYFQGAAARKPTENHVLVMDEVDGMAGNEDRGGMQELIQLIKSCRVPVICMCNDRHHQKIRSLTNYCFDLQFSRPRVEQIRGAMMSICYKEGIKIHPEALNDIITGANHDIRQVLHHLSMWSVK--DKHLSTERAKEESHKAKK-DIKLGPWDVLKKVFSADAHKTMSIHDKSDLFFHDYSLGPLFVQENYLSVMPHKVRGNRKRHLELVAQTAESLSTGDIVEKSIRSRNAWSLLPTQAMLSSVLPGHIMEGHLTSQISFPAWLGKNSRRSKFERLLQELHMHMRLSISGSKEAVNLDYLTHLRDSVVSPLINNGLDGVAATIHIMQNYYLLREDIDSLMEISLWPNQKDPLSCVNSKVKAAFTRTVNKEGIMTPY--SVINIKKSASKFNQDSDIVGDGQDDENGDEVEEDEEDITKDAMIK-KAKKRPAAVNDHAPGGSGS 957
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1325305730|ref|XP_023334479.1| (LOW QUALITY PROTEIN: replication factor C subunit 1-like [Eurytemora affinis]) HSP 1 Score: 531.561 bits (1368), Expect = 4.022e-170 Identity = 264/506 (52.17%), Postives = 347/506 (68.58%), Query Frame = 0 Query: 299 SQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTG-GAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTS----LARDSK---NRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKE-IVLPYSSSLGTIKKSR 761 +QL+VEKYKPT K +IGQQGD+SNM KL WLQ+W++ H K A+P PWGA+ND+GAWAK ALLSGPPGVGKTTTAYLV++ELG+DI+E NASD+RSK+LL++N+S L TS L D+K RVLLMDEVDGMAGNEDRGG+AELI L+K +++P AM+S+ FKEK+ I PDAL ELI+GC QD+RQVLHHLS++KA + KM AK EA+ +KKTS+K+GP+DV +KVFSA+ D +F +F+ E++ + A G+ + M+L+S+ A S +GD+V IRS W LLPT A+F+SV+PGEYMSG+L+GQIQFP+W GK SR+NK DRILQELQMHTRL+ G++K A N+D+ Q LRD I P+ +G+EG+ +V M+ Y+LLREDLD L+EV+ WP + + LK ++SK+KAAFTR YNK+ +LPYS KK++ Sbjct: 565 TQLFVEKYKPTACKNVIGQQGDRSNMAKLRIWLQDWNKNHLHRHGKGAAKPAPWGAANDNGAWAKCALLSGPPGVGKTTTAYLVAQELGYDIVEYNASDTRSKRLLQENVSNTLNTTSVSSLLHHDNKVTSKRVLLMDEVDGMAGNEDRGGIAELIALLKTAKVPVIAMCNDRNHQKIRSLANHCFDLRFQRPRVEQIKAAMLSVCFKEKIKIKPDALQELIIGCGQDIRQVLHHLSMIKAGEHDEKMDAATAKKEADMSKKTSVKMGPWDVCKKVFSAE--------DHKMVFCX------VFSAEDHKTILCSATGGNKRKTMELISRTASSLAEGDIVERGIRSGMNWSLLPTAAIFNSVLPGEYMSGFLHGQIQFPSWLGKNSRRNKMDRILQELQMHTRLTCGVNKTAFNLDYSQPLRDFITRPLRSEGSEGVDAAVQNMETYALLREDLDGLIEVTQWPDRPDILKHVESKTKAAFTRKYNKDNAMLPYSVVQNVKKKAK 1056
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1339044573|ref|XP_023710381.1| (replication factor C subunit 1 [Cryptotermes secundus] >gi|1330908108|gb|PNF30645.1| Replication factor C subunit 1 [Cryptotermes secundus]) HSP 1 Score: 517.309 bits (1331), Expect = 9.547e-166 Identity = 266/544 (48.90%), Postives = 357/544 (65.62%), Query Frame = 0 Query: 301 LWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNK-EIVLPYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAKTK 800 LW +KYKP + K IIGQQGD+SN++KL+ WLQ+W H+G K RP PW A +++G++ K ALLSGPPGVGKTTTA+LV ELGFD++E NASD+RSKKLL + +S L N SL+ + ++N VL+MDEVDGMAGNEDRGGM ELIQLIK S++P GAMMSI FKE + ++P+ L ++I G N DVRQVLHHLS+ + + I K E+ KAKK +K+GP+DVV+KVFSA S+ DKSDLFF DYSLGPLF QENYL P + + K ++LV++ A+S GD+V IRS++AW LLP QA+FSSV+PG+ + G+ QI FP W GK SR++KF R+LQEL H RL+ SKEA+N+D+ LRDAI P+I G +G+ ++ M+ Y LLRED+D+LME+SLWP Q++P+ ++DSK KAA T +NK I+ PY S+ IK S + +++ D +E+ V +EE++ IT+D MIK K + Sbjct: 446 LWADKYKPVSTKHIIGQQGDRSNVKKLIKWLQSWHSNHSGKKKL-VRPSPW-AKDETGSYFKAALLSGPPGVGKTTTAHLVCEELGFDVVEFNASDTRSKKLLHEEVSELLNNKSLSGYFQGAAGRKPTENHVLIMDEVDGMAGNEDRGGMQELIQLIKSSRVPVICMCNDRHHPKIRSLTNYCFDLQFSRPSVKQIGGAMMSICFKEGIKMSPETLNDIITGTNHDVRQVLHHLSVWSVKDKQLSFENI--KEESLKAKK-DVKLGPWDVVKKVFSADVHKSMSIHDKSDLFFHDYSLGPLFVQENYLGVMPHKSRNNRKRHLELVAQTAESLSSGDMVEKTIRSKSAWSLLPAQAIFSSVLPGDLLEGHFTCQINFPAWLGKNSRRSKFQRLLQELHGHMRLNISGSKEAVNLDYMTHLRDAISGPLIKDGVDGVPATLHVMQDYYLLREDIDSLMELSLWPNQKDPMSLVDSKVKAALTHRFNKGGIMTPY--SIVKIKNSASKSSQDLEFDG--DEQDVGEEEEEEEGITRDAMIKVKKR 980
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1080051460|ref|XP_018567232.1| (replication factor C subunit 1 [Anoplophora glabripennis]) HSP 1 Score: 516.538 bits (1329), Expect = 2.693e-165 Identity = 297/674 (44.07%), Postives = 403/674 (59.79%), Query Frame = 0 Query: 206 QSLIEHPSAEMMKSETQVRVSSPPAGGSSRRSRPS--PDAKSSDSHRAMVETPKKAIKREAQRESPRKRVKLAPEPTRSAPAMPLSQD----LENPQEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNW--SQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA-------RDSKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEI-VLPYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGGESSSSTGSRGGKGKGK 829 +S I EM+K ET ++ A + + + D K+S ++ +K + +E + SP+ +++ + + LSQ +E P + W EKYKP ++K+IIGQQGD SNM KL WLQNW +Q K P RP PW A ND GA+ K ALLSGPPGVGKTTTA L+S+ELGFD++E NASD+RSK+LL + ++ L+ ++A K RVLLMDEVDGMAGNEDRGG+ ELI LIK + IP GAMMSI FKE +NI+P+ALTELI G D+RQ L+HLS+ A ++ ++ + EA AKK ++ +GP++VV+ VFS EQ SL DK LFF DYSLGPLF QENYL+ TP D K M S AAD+ GD++ + IRS N W LL TQA+FSSV+PG YMSG + +I FP W GK S NK R+L EL HTR S ++ AL +D+ LR+A++ P+ G +G+ ++++ MK Y+LLREDL+NL+E+ W +NP ID+K K+AFTR YNKE +LP+++ G KK A+ ++ D +D+EE VESD+E+++D+T D MIK KT KA+ S + T S+ KGKGK Sbjct: 371 ESKILKEGKEMIKHETSIKKEEKLARKTDNKLNFNQLSDVKTSSNNDMHKSKDEKVLVKE-ELHSPKSKLQSSKNVKSEVKSENLSQKGFAKIEIPN-SALTWTEKYKPKDIKSIIGQQGDNSNMNKLKKWLQNWYRNQQPEVRKKIP-RPSPW-AKNDDGAYYKAALLSGPPGVGKTTTATLISKELGFDVVEFNASDTRSKRLLHEEVAQLLSTNTIAGFAAGKKTTDKKRVLLMDEVDGMAGNEDRGGIQELINLIKSTHIPVICMCNDRNHQKMRSLVNYCFDLRFNKPRAEQIRGAMMSICFKEGINISPNALTELIQGAGCDIRQTLNHLSMWSA--ADKNLSPEMVRKEAKAAKKDTV-LGPWEVVKLVFSKDEQKNMSLSDKLRLFFYDYSLGPLFVQENYLNVTPSC---DSKEFMKRASLAADAISVGDIIDSRIRSGNNWALLETQAIFSSVLPGFYMSGNVTSRINFPGWLGKNSSANKHKRMLCELHAHTRTSTSGNRMALKLDYLVPLRNAVITPLRKYGTDGVHQAIEVMKSYNLLREDLNNLIELCQWKNLKNPFNDIDAKVKSAFTRIYNKEAPLLPFAAHTGVSKKK----AAAVETDLLDDEEFVESDQEENDDVTADAMIKVKTNSKGKKEPKAST---SKAKTTSKATKGKGK 1027
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1061107573|ref|XP_017880118.1| (PREDICTED: replication factor C subunit 1 isoform X1 [Ceratina calcarata]) HSP 1 Score: 513.072 bits (1320), Expect = 2.273e-164 Identity = 279/585 (47.69%), Postives = 368/585 (62.91%), Query Frame = 0 Query: 298 PSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLA---RDSKNR-----VLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPK-AVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIV-LPYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAKTKRAPAARGKAAAGGESSSSTGSRG---GKGKGKGRGKGK 835 P Q EKY+P +K I+GQQGDKSN +KL +WL NW + T K +P P+ A ND G + K ALLSGPPG+GKTTT +V +ELGFD++E NASD+RSK+LL++ +S L+NTSL D+KN+ VLLMDEVDGMAGNEDRGG+ ELI LIK + IP GAM S+ FKE + ++ + L LI NQD+RQV++HLSL + TG + K+E A K +++GP+DVVRKVFSA+E ++ DKSDLFF DY++ PLF QENYLS P+ G PK A+++ ++ +A+S GD+V IRS NAW LLPTQA FSSVIPG MSGY+ GQI FP W GK SR KF+R++QE+ H RL+ G+SKEA+N+D+ + LR+AIV P+ G E I+ +VD M +Y LLREDLD+L+EVSLWP +P++ +DSK+KAAFTR YNK LPY+ + T K++ AS + ++ E++ EDDN I D MIKAK + K + E S RG K +GRG+GK Sbjct: 438 PVQALSEKYRPKTMKQILGQQGDKSNAKKLHSWLMNWHKNQTSKTKR-TKPSPY-AKNDDGGFFKAALLSGPPGIGKTTTVQVVCKELGFDLVEFNASDTRSKRLLKEEVSELLSNTSLKNYFEDNKNKPSWNHVLLMDEVDGMAGNEDRGGLQELISLIKSTDIPIVCICNDRNNPKMRTLSNYTFDLKFAKPRLEQIRGAMKSVCFKENIQMSNEDLDRLIEATNQDIRQVINHLSLFVGQ------TGTQEKSEKKHANK-DLRLGPWDVVRKVFSAEEHKHMNIHDKSDLFFHDYNISPLFVQENYLSVVPQ---GVPKNALLERIAMSAESIAMGDLVERAIRSNNAWSLLPTQACFSSVIPGTLMSGYIGGQINFPNWLGKNSRTGKFNRLIQEITQHARLTTGVSKEAINLDYLKPLRNAIVRPLTSSGKEDISAAVDVMNRYHLLREDLDSLIEVSLWPGDRDPMQFVDSKTKAAFTRAYNKNSAPLPYAVNATTKKRA----ASSQNEGEEEDALEEEANSEDDN-IDADQMIKAK-------KPKESKNAEPKSKNEGRGKTSNKPAKRGRGRGK 998
BLAST of replication factor c subunit 1 vs. nr
Match: gi|966657995|gb|KTF92849.1| (hypothetical protein cypCar_00034753 [Cyprinus carpio]) HSP 1 Score: 513.457 bits (1321), Expect = 1.200e-163 Identity = 274/544 (50.37%), Postives = 353/544 (64.89%), Query Frame = 0 Query: 299 SQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARD--------SKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVF-SAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVL-PYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAK 798 S LWV+KY+P +LK +IGQQGD+S KL+ WLQNW ++H+G KAPA+ +G S D G+ K ALLSGPPGVGKTTTA LV ELG+ +E+NAS +RSK L++ I+ +L NTS+ S VL+MDEVDGMAGNEDRGG+ E+I LIK+S+IP GA+MSI FKE + I P AL E+I+ NQD+RQVLH+LS+ A+ + MT +AKA+AN A+K +K+GPFDV RKVF S +E A SL+DKSDLFF DYSL PLF QENYL P AA G+ K + L+SK ADS CDGD+V IRSR AW LLPTQA+++SV+PGE M GY++ FP+W GK+S K RI+QEL H L SKEA+N+D+ LR A++ P+ +G+EG +SV M Y L++ED+DN+ME+S W Q +P +DSK KAAFTR YNKE L PY SL +KKSR G + +D E ++ +EE+DN +T D MIK K Sbjct: 512 SLLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGITKAPAKFGKFG-SKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAK--DKVMTYDQAKADANSARK-DMKLGPFDVCRKVFASGEESAHMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKNHLVLLSKTADSICDGDLVDKQIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIVQELASHMSLKTLSSKEAINLDYLPYLRSAVLEPLQSQGSEGAGQSVQLMDDYDLIKEDVDNMMEISTWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPY--SLQVVKKSRKGAVDRELIGELDGESQLQ-EEEEDNGVTSDAMIKQK 1048
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1025168479|ref|XP_016357382.1| (PREDICTED: replication factor C subunit 1-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 514.227 bits (1323), Expect = 3.434e-163 Identity = 275/562 (48.93%), Postives = 357/562 (63.52%), Query Frame = 0 Query: 281 RSAPAMPLSQDLENPQEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARD--------SKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVF-SAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVL-PYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAK 798 R+ A P+S + S LWV+KY+P +LK +IGQQGD+S KL+ WLQNW ++H+G KAP++ +G S D G+ K ALLSGPPGVGKTTTA LV ELG+ +E+NAS +RSK L++ I+ +L NTS+ S VL+MDEVDGMAGNEDRGG+ E+I LIK+S+IP GAMMSI FKE + I P AL E+I+ N D+RQVLH+LS+ A+ + MT +AKA+AN A+K +K+GPFDV RKVF S +E A +L+DKSDLFF DYSL PLF QENYL P AA G+ K + L+SK DS CDGD+V IRSR AW LLPTQA+++SV+PGE M GY++ FP+W GK+S K RI+QEL H L SKEA+N+D+ LR A++ P+ +G+EG +SV M Y L++ED+DN+ME+S W Q +P +DSK KAAFTR YNKE L PY SL +KKSR G + +D E + +EE+DN +T D MIK K Sbjct: 557 RTKRASPVSHSTPENERSSLLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGSTKAPSKFGKFG-SKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILASNHDIRQVLHNLSMWSAK--DKVMTYDQAKADANNARK-DMKLGPFDVCRKVFASGEESAHMTLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKNHLVLLSKTVDSICDGDLVDKRIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELASHMSLKTLSSKEAINLDYLPYLRSAVLEPLQSQGSEGANQSVQLMDDYDLIKEDVDNMMEISTWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPY--SLQVVKKSRTGAVDPELIGELDGESQFQ-EEEEDNGVTADAMIKQK 1111
BLAST of replication factor c subunit 1 vs. nr
Match: gi|1025218063|ref|XP_016430607.1| (PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 509.22 bits (1310), Expect = 2.638e-161 Identity = 272/561 (48.48%), Postives = 355/561 (63.28%), Query Frame = 0 Query: 281 RSAPAMPLSQDLENPQEPSQLWVEKYKPTNLKAIIGQQGDKSNMRKLMTWLQNWSQYHTGGAKAPARPPPWGASNDSGAWAKVALLSGPPGVGKTTTAYLVSRELGFDIMELNASDSRSKKLLEQNISVALTNTSLARD--------SKNRVLLMDEVDGMAGNEDRGGMAELIQLIKKSQIP----------------------------------GAMMSIVFKEKVNIAPDALTELIVGCNQDVRQVLHHLSLMKARASESKMTGIEAKAEANKAKKTSIKVGPFDVVRKVFSAKEQAGKSLMDKSDLFFQDYSLGPLFTQENYLSCTPEAANGDPKAVMDLVSKAADSFCDGDVVSALIRSRNAWGLLPTQAMFSSVIPGEYMSGYLNGQIQFPTWFGKYSRQNKFDRILQELQMHTRLSAGLSKEALNMDFCQSLRDAIVNPMILKGAEGIAESVDAMKKYSLLREDLDNLMEVSLWPLQENPLKMIDSKSKAAFTRTYNKEIVL-PYSSSLGTIKKSRVGVASEIDVDAMDEEEVVESDEEDDNDITKDTMIKAK 798 R+ A P+S + S LWV+KY P +LK +IGQQGD+S KL+ WLQNW ++H+G KAP++ +G S D G+ K ALLSGPPGVGKTTTA LV ELG+ +E+NAS +RSK L++ I+ +L NTS+ S VL+MDEVDGMAGNEDRGG+ E+I LIK+S+IP GAMMSI FKE + I P AL E+I+ N D+RQVLH+LS+ A+ + MT +AKA+AN A+K +K+GPFDV RKVF++ E++ DKSDLFF DYSL PLF QENYL P AA G+ K + L+SK ADS CDGD+V IRSR AW LLPTQA+++SV+PGE M GY++ FP+W GK+S K RI+QEL H L SKEA+N+D+ LR A++ P+ +G+EG +SV M Y L++ED+DN+ME+S W Q +P +DSK KAAFTR YNKE L PY SL +KKSR G + ++ E + +EE+DN +T D MIK K Sbjct: 557 RTKRASPVSHSTPENEGSSLLWVDKYCPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGSTKAPSKFGKFG-SKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGASQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEVILASNHDIRQVLHNLSMWSAK--DKVMTYDQAKADANNARK-DMKLGPFDVCRKVFASGEESAHMTXDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKNHLVLLSKTADSICDGDLVDKRIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELASHMSLKTLSSKEAINLDYLPYLRSAVLEPLQSQGSEGANQSVQLMDDYDLIKEDVDNMMEISTWGGQPDPYSKLDSKVKAAFTRAYNKESHLTPY--SLQVVKKSRKGAVDPELIGELNGESQFQ-EEEEDNGVTADAMIKQK 1110 The following BLAST results are available for this feature:
BLAST of replication factor c subunit 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of replication factor c subunit 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of replication factor c subunit 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold55_size446313:756..3972+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold55_size446313-snap-gene-0.14 ID=maker-scaffold55_size446313-snap-gene-0.14|Name=replication factor c subunit 1|organism=Tigriopus kingsejongensis|type=gene|length=3217bp|location=Sequence derived from alignment at scaffold55_size446313:756..3972+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'replication factor c subunit 1' has the following synonyms
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