histone h1, maker-scaffold578_size132436-snap-gene-0.33 (gene) Tigriopus kingsejongensis

Overview


Name	histone h1
Unique Name	maker-scaffold578_size132436-snap-gene-0.33
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000002494 (supercontig:LSalAtl2s:LSalAtl2s1489:15247:16434:1 gene:EMLSAG00000002494 transcript:EMLSAT00000002494 description:"snap_masked-LSalAtl2s1489-processed-gene-0.4")

HSP 1 Score: 113.235 bits (282), Expect = 7.474e-32
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 0

Query:  188 TLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSES 275
            T  TD   +LD+L H+  +LGV+ AQVGV ++  Q+SL  LLESHD R LETQV LE+LS+LT+QTL+GQ  DE+   LLV+TD SES
Sbjct:   24 TFTTDTTSKLDILWHNSDTLGVNSAQVGVFKKTHQISLRSLLESHDSRGLETQVSLEILSNLTNQTLKGQFTDEEFSRLLVSTDFSES 111

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BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000007017 (supercontig:LSalAtl2s:LSalAtl2s399:369382:380976:-1 gene:EMLSAG00000007017 transcript:EMLSAT00000007017 description:"snap_masked-LSalAtl2s399-processed-gene-3.2")

HSP 1 Score: 80.4925 bits (197), Expect = 9.295e-20
Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 0

Query:  189 LATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADE 261
             +++  GQLD+LGHDGH+ GV+G QVG+ EE  Q+   G L+  +   LE ++ L+VLS+LT++TLE +  D+
Sbjct:   21 FSSNTTGQLDILGHDGHTFGVNGTQVGIFEETHQIGFRGFLKCTNSSTLEPKIRLKVLSNLTNKTLERKFTDQ 93

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BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000011181 (supercontig:LSalAtl2s:LSalAtl2s760:411488:411772:-1 gene:EMLSAG00000011181 transcript:EMLSAT00000011181 description:"augustus_masked-LSalAtl2s760-processed-gene-3.4")

HSP 1 Score: 78.1814 bits (191), Expect = 7.440e-19
Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 0

Query:  183 APKKNTLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGL 243
            A   +T ATD A +LD+LGHD ++LGVD AQVG+L+E +++SLG  L+SHD R LETQV L
Sbjct:   17 AIHLSTFATDTASELDILGHDCNTLGVDCAQVGILKETNKISLGSFLKSHDSRGLETQVSL 77

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BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000000191 (supercontig:LSalAtl2s:LSalAtl2s1029:169839:170456:1 gene:EMLSAG00000000191 transcript:EMLSAT00000000191 description:"augustus_masked-LSalAtl2s1029-processed-gene-1.5")

HSP 1 Score: 65.0846 bits (157), Expect = 6.634e-13
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0

Query:   15 KVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKV---DVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLT 92
            KVAA+HP    MV+AA+  LKE+ GSS  AI KYI ANYKV   D    AH +K A+KS      L Q +G GA+G F++T
Sbjct:   32 KVAASHPKYVDMVVAAIHGLKEQKGSSKHAILKYIMANYKVGDNDKHINAH-VKIALKSGSXDGXLKQVRGNGAAGXFRVT 111

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BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000010823 (supercontig:LSalAtl2s:LSalAtl2s719:236202:237270:1 gene:EMLSAG00000010823 transcript:EMLSAT00000010823 description:"snap_masked-LSalAtl2s719-processed-gene-2.2")

HSP 1 Score: 58.151 bits (139), Expect = 1.690e-11
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0

Query:  199 VLGHDGHSLGVDGAQVGVLEEADQVSLG-GLLESHDGRRLETQVGLEVLSDLTDQTLEGQLAD 260
            +LG DGH+ GV+GAQVGV EE  Q+    G L+  +   LE ++ L+VLS+L ++TLE +  D
Sbjct:   15 ILGLDGHTFGVNGAQVGVFEEIQQIDDSRGFLKCTNNSSLELKIRLKVLSNLINKTLERKFTD 77

[Close]

BLAST of histone h1 vs. L. salmonis genes
Match: EMLSAG00000009978 (supercontig:LSalAtl2s:LSalAtl2s652:276846:277262:-1 gene:EMLSAG00000009978 transcript:EMLSAT00000009978 description:"snap_masked-LSalAtl2s652-processed-gene-2.24")

HSP 1 Score: 51.9878 bits (123), Expect = 1.532e-9
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0

Query:  180 KRGAPKKNTLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHD 233
            KR     +  + +  GQLD+LGH+  + GV+GAQVGV EE  Q+   G LE  +
Sbjct:    6 KRRETLLSPFSANTTGQLDILGHNSDTFGVNGAQVGVFEETHQIGFRGFLEREN 59

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BLAST of histone h1 vs. SwissProt
Match: gi|462228|sp|P35060.1|H1_TIGCA (RecName: Full=Histone H1)

HSP 1 Score: 144.05 bits (362), Expect = 1.495e-41
Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 MTDS-PAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSF 89
            MT++  AK KKV+KPK   THPPTSVMVMAA+KALKERNGSSLPAIKKYIAANYKVDV K AHFIKKA+KSLVEKKKL QTKG GASGSF
Sbjct:    1 MTETTSAKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90

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BLAST of histone h1 vs. SwissProt
Match: gi|729666|sp|P40278.1|H1E_CHITE (RecName: Full=Histone H1E)

HSP 1 Score: 101.679 bits (252), Expect = 1.299e-24
Identity = 66/109 (60.55%), Postives = 74/109 (67.89%), Query Frame = 0

Query:   17 AATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEKPKVVKPKKAK-TPK-KKTATKKVAGE 123
            A THPP S MV+ A+  LKER GSSL AIKK++AA YKVDV K   FIKK +K+ V K  L Q KG GASGSFKL  +AK    KV KPKKA  TPK K T  K+V GE
Sbjct:   48 APTHPPVSEMVVNAITTLKERGGSSLIAIKKFVAAQYKVDVEKLVPFIKKFLKASVAKGTLLQAKGKGASGSFKLPPAAK----KVDKPKKAPATPKPKSTKPKRVTGE 152

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BLAST of histone h1 vs. SwissProt
Match: gi|121947|sp|P02255.1|H1_DROME (RecName: Full=Histone H1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.080e-23
Identity = 64/107 (59.81%), Postives = 73/107 (68.22%), Query Frame = 0

Query:   19 THPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEK-PKVVKPKKAKTPKKKTATKKVAGEK 124
            +HPPT  MV A++K LKER GSSL AIKKYI A YK D  K A FIKK +KS V   KL QTKG GASGSFKL+ SAK EK PK     K  + +KK  +KKVA +K
Sbjct:   45 SHPPTQQMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA--KSKVLSAEKKVQSKKVASKK 149

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BLAST of histone h1 vs. SwissProt
Match: gi|121949|sp|P06144.1|H1_LYTPI (RecName: Full=Late histone H1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.365e-23
Identity = 50/72 (69.44%), Postives = 56/72 (77.78%), Query Frame = 0

Query:   20 HPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            HPPTS MV+AA+ ALKER GSS  AIKKYIAANYKVD+ K A FIK+A+K+ V    L Q KG GASGSFKL
Sbjct:   18 HPPTSQMVVAAITALKERGGSSNQAIKKYIAANYKVDINKQATFIKRALKAGVANGTLVQVKGKGASGSFKL 89

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BLAST of histone h1 vs. SwissProt
Match: gi|729660|sp|P40276.1|H1B_CHITE (RecName: Full=Histone H1B)

HSP 1 Score: 98.5969 bits (244), Expect = 1.480e-23
Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = 0

Query:   19 THPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            THPP S MV+ AVK LKER GSSL AIKK++ A YKVDV K A FIKK +KS VEK +L QTKG GASGSFKL
Sbjct:   39 THPPVSEMVVNAVKTLKERGGSSLQAIKKFLVAQYKVDVDKLAPFIKKYLKSAVEKGQLLQTKGKGASGSFKL 111

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BLAST of histone h1 vs. SwissProt
Match: gi|11386769|sp|Q94972.1|H13_DROVI (RecName: Full=Histone H1.3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.261e-22
Identity = 54/84 (64.29%), Postives = 61/84 (72.62%), Query Frame = 0

Query:   19 THPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVE-KPK 101
            +HPPT  MV A++K LKER GSSL AIKKYI A YK D  K A FIKK +K+ V   KL QTKG GASGSFKL+ SAK + KPK
Sbjct:   44 SHPPTQQMVDASIKNLKERGGSSLLAIKKYIGATYKCDAQKLAPFIKKYLKNAVANGKLIQTKGKGASGSFKLSRSAKKDAKPK 127

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BLAST of histone h1 vs. SwissProt
Match: gi|121929|sp|P19375.1|H1E_STRPU (RecName: Full=Histone H1, early embryonic)

HSP 1 Score: 94.7449 bits (234), Expect = 2.357e-22
Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 0

Query:    8 TKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSA 95
            +KKV   K AA HPP + MV  A+  LK+RNGSSL AIKKYIA N+ V + +   FIK+A+KS VEK KL QTKG GASGSFK+   A
Sbjct:    7 SKKVTTKKPAA-HPPAAEMVATAITELKDRNGSSLQAIKKYIATNFDVQMDRQLLFIKRALKSGVEKGKLVQTKGKGASGSFKVNVQA 93

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BLAST of histone h1 vs. SwissProt
Match: gi|729656|sp|P40265.1|H13_GLYBA (RecName: Full=Histone H1-III)

HSP 1 Score: 94.7449 bits (234), Expect = 4.317e-22
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0

Query:   19 THPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            THPP S MV+ A+K LKER GSSL AIKK++AA YKVDV K A FIKK ++  V K +L QTKG GASGSFKL
Sbjct:   39 THPPVSEMVVNAIKTLKERGGSSLQAIKKFLAAQYKVDVDKLAPFIKKYLRGAVTKGELLQTKGKGASGSFKL 111

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BLAST of histone h1 vs. SwissProt
Match: gi|121930|sp|P07796.1|H1G_STRPU (RecName: Full=Histone H1-gamma, late)

HSP 1 Score: 93.9745 bits (232), Expect = 5.505e-22
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0

Query:   15 KVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            +VA  HPP+S MV+AAV ALKER GSS  AIKKYIAANY VD+ K   FI++A+   V    L QTKG GASGSFKL
Sbjct:   13 RVAPAHPPSSQMVVAAVTALKERGGSSTQAIKKYIAANYTVDMTKQGPFIRRALVKGVASGALVQTKGKGASGSFKL 89

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BLAST of histone h1 vs. SwissProt
Match: gi|121921|sp|P15869.1|H1B_STRPU (RecName: Full=Histone H1-beta, late embryonic)

HSP 1 Score: 93.9745 bits (232), Expect = 5.526e-22
Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 0

Query:    6 AKTKKVAK-PKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            A+ KKVAK P+    HP +S MV+AA+ ALKER GSS  AI+KYI  NY VD+ K A FIK+A+ + VEK  L Q KG GASGSFKL
Sbjct:    3 AEQKKVAKKPRAKPAHPSSSEMVLAAITALKERGGSSAQAIRKYIEKNYTVDIKKQAIFIKRALITGVEKGTLVQVKGKGASGSFKL 89

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BLAST of histone h1 vs. nr
Match: gi|462228|sp|P35060.1|H1_TIGCA (RecName: Full=Histone H1 >gi|161894|gb|AAC41551.1| histone H1 [Tigriopus californicus] >gi|260525|gb|AAA12276.1| histone H1 [Tigriopus californicus])

HSP 1 Score: 144.05 bits (362), Expect = 4.635e-39
Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 MTDS-PAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSF 89
            MT++  AK KKV+KPK   THPPTSVMVMAA+KALKERNGSSLPAIKKYIAANYKVDV K AHFIKKA+KSLVEKKKL QTKG GASGSF
Sbjct:    1 MTETTSAKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKNAHFIKKALKSLVEKKKLVQTKGAGASGSF 90

[Close]

BLAST of histone h1 vs. nr
Match: gi|1050377392|gb|OCT79589.1| (hypothetical protein XELAEV_18026397mg [Xenopus laevis])

HSP 1 Score: 136.346 bits (342), Expect = 4.148e-35
Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0

Query:  185 KKNTLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSES 275
            K N+LA+D AGQLDVLGHDG  LG+DGAQ+GVL++A+Q+SL GLL+SHDGR LETQV LE+LSDLT+Q LE Q A++QL G LV +D SES
Sbjct:  128 KSNSLASDPAGQLDVLGHDGDPLGMDGAQIGVLKQANQISLAGLLQSHDGRALETQVSLEILSDLTNQALERQFANQQLSGFLVTSDFSES 218

[Close]

BLAST of histone h1 vs. nr
Match: gi|256794766|gb|ACV29864.1| (histone H3, partial [Sinum sanctijohannis])

HSP 1 Score: 126.716 bits (317), Expect = 1.487e-33
Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = 0

Query:  198 DVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSESH 276
            DVLGHDG +LGVDGAQVGVL+E DQV   GLLESHDGR LE QV LEVLSDLTDQTLEGQLAD++L  LLV TDL+ESH
Sbjct:    2 DVLGHDGDTLGVDGAQVGVLKETDQVGFAGLLESHDGRALEAQVSLEVLSDLTDQTLEGQLADQKLSALLVTTDLTESH 80

[Close]

BLAST of histone h1 vs. nr
Match: gi|1218253651|ref|XP_021706535.1| (histone H1-like [Aedes aegypti])

HSP 1 Score: 125.561 bits (314), Expect = 1.869e-31
Identity = 81/130 (62.31%), Postives = 90/130 (69.23%), Query Frame = 0

Query:    2 TDSPAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEKP--KVVKPKKAKTPKKKTATKKVAGEKKAKSP 129
            T  P   K   KPK  +THPP + MV+AA+K LKERNGSSL AIKKYIAANYK DVAK A F+KKA+K+ VEK K  QTKGTGASGSFKL      E+P     K  K  T +KK ATKK AGEKKAK P
Sbjct:   20 TKKPRAPKGQGKPKKPSTHPPVNDMVVAAIKTLKERNGSSLQAIKKYIAANYKCDVAKLAPFLKKALKNGVEKGKFVQTKGTGASGSFKL------EEPKKAGEKKAKKATGEKKKATKKPAGEKKAKKP 143

[Close]

BLAST of histone h1 vs. nr
Match: gi|1096319135|gb|OIC15588.1| (hypothetical protein A7L51_19665 [Acinetobacter baumannii])

HSP 1 Score: 121.324 bits (303), Expect = 4.633e-31
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 0

Query:  188 TLATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSESH 276
            TL T+AAG+LDVL  DG +LGVD A+VGVLEE D+V L GLL+  DG RLE QVGLEVLS+LT++TLEGQLADE+LG LLVATDL+ES 
Sbjct:   10 TLTTEAAGELDVLALDGDTLGVDSAEVGVLEERDEVGLDGLLKRADGGRLEAQVGLEVLSNLTNKTLEGQLADEELGRLLVATDLTESD 98

[Close]

BLAST of histone h1 vs. nr
Match: gi|913499546|ref|XP_005355008.2| (PREDICTED: uncharacterized protein LOC102002096 [Microtus ochrogaster])

HSP 1 Score: 132.109 bits (331), Expect = 5.974e-31
Identity = 66/88 (75.00%), Postives = 73/88 (82.95%), Query Frame = 0

Query:  189 LATDAAGQLDVLGHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLTDQTLEGQLADEQLGGLLVATDLSESH 276
            L TDAAGQLDVLGHDG +LGVDGAQVGVL++  QV L GLL+SHDGR LE QVGLEVL DL  QTLE QLAD+QLG LLVA DL++ H
Sbjct:  246 LPTDAAGQLDVLGHDGDALGVDGAQVGVLKQTHQVGLAGLLQSHDGRALEAQVGLEVLRDLAHQTLERQLADQQLGRLLVAPDLAQRH 333

[Close]

BLAST of histone h1 vs. nr
Match: gi|1126183567|ref|XP_019624357.1| (PREDICTED: LOW QUALITY PROTEIN: histone H1-like [Branchiostoma belcheri])

HSP 1 Score: 121.324 bits (303), Expect = 2.250e-29
Identity = 60/91 (65.93%), Postives = 73/91 (80.22%), Query Frame = 0

Query:    1 MTDSPAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKL 91
            M+ + +  KK +KPK  A HPPT+ M+ AAV+ALK+R GSS+PAIKKYIAANYK DV K AHFIK+A+K+LVEK  L Q KGTGASGSFK+
Sbjct:   16 MSTAASSPKKASKPKAPAAHPPTTAMITAAVEALKDRTGSSVPAIKKYIAANYKFDVEKKAHFIKRALKALVEKGTLLQVKGTGASGSFKI 106

[Close]

BLAST of histone h1 vs. nr
Match: gi|1218210737|ref|XP_021712190.1| (histone H1B-like [Aedes aegypti])

HSP 1 Score: 117.857 bits (294), Expect = 5.999e-29
Identity = 81/134 (60.45%), Postives = 89/134 (66.42%), Query Frame = 0

Query:    2 TDSPAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSF------KLTTSAKVEKPKVVKPKKAKTPKKKTATKKVAGEKKAKSP 129
            T  P   K   KPK  +THPP + MV+AA+K LKERNGSSL AIKKYIAANYK DVAK A F+KKA+K+ VEK K  QTKGTGASGSF      K   S K  K    K  K  T +KK ATKK AGEKKAK P
Sbjct:   20 TKKPRAPKGQGKPKKPSTHPPVNDMVVAAIKTLKERNGSSLQAIKKYIAANYKCDVAKLAPFLKKALKNGVEKGKFVQTKGTGASGSFKLKAEAKKAASEKKPKKAGEKKAKKATGEKKKATKKPAGEKKAKKP 153

[Close]

BLAST of histone h1 vs. nr
Match: gi|170053396|ref|XP_001862653.1| (histone H1 [Culex quinquefasciatus] >gi|167873962|gb|EDS37345.1| histone H1 [Culex quinquefasciatus])

HSP 1 Score: 119.783 bits (299), Expect = 6.018e-29
Identity = 70/111 (63.06%), Postives = 79/111 (71.17%), Query Frame = 0

Query:   13 KPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEKPKVVKPKKAKTPKKKTATKKVAGE 123
            KPK  ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL QTKG+GASGSFK+   AK       KP   K P      KKVAGE
Sbjct:   35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKIKAEAK-------KPAGEKKP------KKVAGE 132

[Close]

BLAST of histone h1 vs. nr
Match: gi|170053436|ref|XP_001862672.1| (histone H1 [Culex quinquefasciatus] >gi|167873981|gb|EDS37364.1| histone H1 [Culex quinquefasciatus])

HSP 1 Score: 119.398 bits (298), Expect = 6.760e-29
Identity = 67/103 (65.05%), Postives = 76/103 (73.79%), Query Frame = 0

Query:   13 KPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIAANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEKPKVVKPKKAKTPKKKT 115
            KPK  ATHPP + MV+AA++ LKERNGSSL AIKKYIAANYK DVAK + FIKKA+K+ VEK KL QTKG+GASGSFK+   AK       KP   K PKK T
Sbjct:   35 KPKKPATHPPVNEMVIAAIQTLKERNGSSLQAIKKYIAANYKCDVAKLSTFIKKALKTNVEKGKLVQTKGSGASGSFKIKAEAK-------KPAGEKKPKKAT 130

The following BLAST results are available for this feature:

BLAST of histone h1 vs. L. salmonis genes
BLAST of histone h1 vs. SwissProt
BLAST of histone h1 vs. nr

BLAST of histone h1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 6


Match Name	E-value	Identity	Description
EMLSAG00000002494	7.474e-32	57.95	supercontig:LSalAtl2s:LSalAtl2s1489:15247:16434:1 ...	[more]
EMLSAG00000007017	9.295e-20	45.21	supercontig:LSalAtl2s:LSalAtl2s399:369382:380976:-...	[more]
EMLSAG00000011181	7.440e-19	59.02	supercontig:LSalAtl2s:LSalAtl2s760:411488:411772:-...	[more]
EMLSAG00000000191	6.634e-13	50.62	supercontig:LSalAtl2s:LSalAtl2s1029:169839:170456:...	[more]
EMLSAG00000010823	1.690e-11	46.03	supercontig:LSalAtl2s:LSalAtl2s719:236202:237270:1...	[more]
EMLSAG00000009978	1.532e-9	42.59	supercontig:LSalAtl2s:LSalAtl2s652:276846:277262:-...	[more]

BLAST of histone h1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|462228\|sp\|P35060.1\|H1_TIGCA	1.495e-41	83.33	RecName: Full=Histone H1	[more]
gi\|729666\|sp\|P40278.1\|H1E_CHITE	1.299e-24	60.55	RecName: Full=Histone H1E	[more]
gi\|121947\|sp\|P02255.1\|H1_DROME	1.080e-23	59.81	RecName: Full=Histone H1	[more]
gi\|121949\|sp\|P06144.1\|H1_LYTPI	1.365e-23	69.44	RecName: Full=Late histone H1	[more]
gi\|729660\|sp\|P40276.1\|H1B_CHITE	1.480e-23	71.23	RecName: Full=Histone H1B	[more]
gi\|11386769\|sp\|Q94972.1\|H13_DROVI	1.261e-22	64.29	RecName: Full=Histone H1.3	[more]
gi\|121929\|sp\|P19375.1\|H1E_STRPU	2.357e-22	59.09	RecName: Full=Histone H1, early embryonic	[more]
gi\|729656\|sp\|P40265.1\|H13_GLYBA	4.317e-22	67.12	RecName: Full=Histone H1-III	[more]
gi\|121930\|sp\|P07796.1\|H1G_STRPU	5.505e-22	63.64	RecName: Full=Histone H1-gamma, late	[more]
gi\|121921\|sp\|P15869.1\|H1B_STRPU	5.526e-22	59.77	RecName: Full=Histone H1-beta, late embryonic	[more]

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BLAST of histone h1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|462228\|sp\|P35060.1\|H1_TIGCA	4.635e-39	83.33	RecName: Full=Histone H1 >gi\|161894\|gb\|AAC41551.1\|...	[more]
gi\|1050377392\|gb\|OCT79589.1\|	4.148e-35	69.23	hypothetical protein XELAEV_18026397mg [Xenopus la...	[more]
gi\|256794766\|gb\|ACV29864.1\|	1.487e-33	79.75	histone H3, partial [Sinum sanctijohannis]	[more]
gi\|1218253651\|ref\|XP_021706535.1\|	1.869e-31	62.31	histone H1-like [Aedes aegypti]	[more]
gi\|1096319135\|gb\|OIC15588.1\|	4.633e-31	71.91	hypothetical protein A7L51_19665 [Acinetobacter ba...	[more]
gi\|913499546\|ref\|XP_005355008.2\|	5.974e-31	75.00	PREDICTED: uncharacterized protein LOC102002096 [M...	[more]
gi\|1126183567\|ref\|XP_019624357.1\|	2.250e-29	65.93	PREDICTED: LOW QUALITY PROTEIN: histone H1-like [B...	[more]
gi\|1218210737\|ref\|XP_021712190.1\|	5.999e-29	60.45	histone H1B-like [Aedes aegypti]	[more]
gi\|170053396\|ref\|XP_001862653.1\|	6.018e-29	63.06	histone H1 [Culex quinquefasciatus] >gi\|167873962\|...	[more]
gi\|170053436\|ref\|XP_001862672.1\|	6.760e-29	65.05	histone H1 [Culex quinquefasciatus] >gi\|167873981\|...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold578_size132436	supercontig	scaffold578_size132436:14..1720 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:nucleosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold578_size132436-snap-gene-0.33-mRNA-1	maker-scaffold578_size132436-snap-gene-0.33-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold578_size132436:14..1720-

gene from alignment at scaffold578_size132436:14..1720-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold578_size132436-snap-gene-0.33 ID=maker-scaffold578_size132436-snap-gene-0.33|Name=histone h1|organism=Tigriopus kingsejongensis|type=gene|length=1707bp|location=Sequence derived from alignment at scaffold578_size132436:14..1720- (Tigriopus kingsejongensis)
ATGACGGATTCTCCTGCCAAAACCAAGAAGGTCGCCAAGCCCAAAGTTGC
AGCCACCCATCCACCCACCTCGGTGATGGTTATGGCTGCCGTCAAGGCCT
TGAAGGAGCGCAACGGCTCTTCTCTGCCCGCCATCAAGAAGTACATTGCC
GCCAACTACAAGGTCGATGTGGCCAAGACTGCTCATTTCATCAAGAAGGC
CGTCAAGTCCCTGGTGGAAAAGAAGAAGCTAACTCAGACCAAGGGTACCG
GGGCTTCCGGTTCCTTCAAGCTGACTACCTCTGCCAAGGTTGAGAAGCCC
AAGGTGGTCAAGCCCAAGAAGGCTAAGACGCCCAAAAAGAAGACTGCCAC
CAAGAAGGTCGCTGGTGAGAAGAAGGCCAAGTCTCCCAAGAAGAAGACTC
CCGCCAAGAAGGCCGCCACAAAGAAGGTGGAGAAAGCCGCTGTTGTGGGC
AAGAAGCCCAAGACCCCCAAGAAGAAGCCCGCAGTCAAGAAGGCCGCGCC
AGCCAAGAAGGTTGTAGCCAAGAAAGCCTCACCGAAGAAGCGAGGGGCAC
CCAAGAAAAAGTAAATCTTTAACCATGGAAAACCCCTTGTGAGGGACCAA
AACACCTTTCCAAACCCGGCTCTTTTCAGAGCCAAAAATATGTTCATAAG
GTATTCAAAGCACTAGCAGTATATTTAATAACAATATTTCACATTTTTTG
GGAGAACCCATCAATGGCACGCTTAGTAAACACATACGAACAGTTATGTG
CAAAGACAATATATACACAGGTTGATAATGGTAGATGCGTGGGTACATGC
TTAGTTCGTTAATAATAAACAAAAATTAAAAAAATCAATGATATAAGAAA
GCAATGATAAAGATGAATATCCTCCACATTTATTTTTCTATATATTTTTT
TAACAGTCAGGGACCTTTTTTGCCATTTTCAATCCTACACTTCATAAATT
TTTTAACATTTATTGTGCGTTAGTTTTGAAAGATTTATTGATTGCTTAGG
CTTTTAAACATTTATTGTGTTTCCATTATCGAGTTGTTCTGTTTTGTACA
GTTTGCTGCAATGTTATCTATAGTATCTTTGTTTGAATTAATGTGTATAT
TTTATTTATAAATGGCCCTAACACTATTGGCTAGTATTCGTATGCTATGT
GTTGACTGTGGGGAAAATAAACCTATTTATTTATATGTAGGAAGAAACGA
TTACACACACACGCTGGTAAGATCAAGTTCGGAATATGTGGGGGAATTGT
ACTCTAGATTTATTCAATCTATGAAAGGAGCACCTTACATATTTGCCGGT
TATCAATCAAATTTTCCTATAATAAGATGGTTTTGTTGGTCAGGTCATGC
ATAAGCTTTAAATCAGGTAATAATATTTGTTTTGGCCTTGAAAAAGGCCT
TATTTTGGGAAATGGGTGGTCAGGTTCTGATCATCTAAGCACGCTCGCCA
CGGATGCGGCGGGCCAGCTGGATGTCCTTGGGCATGATGGTCACTCGCTT
GGCGTGGATGGCGCACAAGTTGGTGTCCTCGAAGAGGCCGACCAAGTAAG
CCTCGGAGGCCTCCTGGAGAGCCATGACGGCCGACGATTGGAAACGCAAG
TCGGTCTTGAAGTCCTGAGCGATCTCACGGACCAGACGCTGGAAGGGCAG
CTTGCGGATGAGCAGCTCGGTGGACTTTTGGTAGCGACGGATCTCTCGGA
GAGCCAC

Synonyms

The feature 'histone h1' has the following synonyms


Synonym
Tk11693

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