charged multivesicular body protein 3, maker-scaffold604_size126151-snap-gene-0.32 (gene) Tigriopus kingsejongensis

Overview


Name	charged multivesicular body protein 3
Unique Name	maker-scaffold604_size126151-snap-gene-0.32
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of charged multivesicular body protein 3 vs. L. salmonis genes
Match: EMLSAG00000000626 (supercontig:LSalAtl2s:LSalAtl2s109:757972:765988:1 gene:EMLSAG00000000626 transcript:EMLSAT00000000626 description:"augustus_masked-LSalAtl2s109-processed-gene-7.1")

HSP 1 Score: 238.424 bits (607), Expect = 1.297e-79
Identity = 119/201 (59.20%), Postives = 161/201 (80.10%), Query Frame = 0

Query:   32 KIARITNMGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKA-RVPEASIDLP 231
            K + IT MGLFG+SK+P+PK  V EW K +RKEGY +DRQI  I+REE K  RS K +AK+GDK+S +VLA+E+VN+RK+V+K+Y AKA++SS+E  MK QA+Q+++AG+L +S+EVM+ MQ+LIK+PE+  TMQELSKEMMKAGI EEMMEDT ++  + +ELE++ Q EVDKVL+EL     K++ KA  VP+ASID+P
Sbjct:    7 KKSSITIMGLFGRSKSPNPKERVNEWGKKLRKEGYNLDRQIRQIQREEAKVTRSIKESAKRGDKDSCRVLAREVVNSRKTVNKIYVAKANLSSVEMQMKNQASQVRLAGTLSQSTEVMQCMQKLIKLPEIAHTMQELSKEMMKAGIFEEMMEDTFDN--EPEELEDDVQKEVDKVLAELTEGDRKTMEKAPSVPQASIDIP 205

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BLAST of charged multivesicular body protein 3 vs. L. salmonis genes
Match: EMLSAG00000001138 (supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1 gene:EMLSAG00000001138 transcript:EMLSAT00000001138 description:"maker-LSalAtl2s118-augustus-gene-4.15")

HSP 1 Score: 77.0258 bits (188), Expect = 2.964e-17
Identity = 62/219 (28.31%), Postives = 116/219 (52.97%), Query Frame = 0

Query:   41 LFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALR 259
            LFG+  +PD   M+++  + + K    +DR+   ++++E K +   K  AKQG  ++ +++AK++V  R+ V K    +A++ ++   ++   +Q  MA +++  +  M+ M + +K+P++QK MQE  K+     + EEMM D ++     DE E+ +   V +VL EL    N  L       +++  P   + +  A   VE+    +QERL ALR
Sbjct:    4 LFGRKMSPDE--MLRKNQRALNKAMRELDRERTKMEQQEKKIIGDIKKMAKQGQMDAVRIMAKDLVRTRRYVKKFMLMRANIQAVSLKIQTLKSQNSMAEAMKGVTRAMQNMNRQMKLPQIQKIMQEFEKQSEIMDMKEEMMSDCIDDALGDDEDEDESDAIVSQVLDELGLQLNDQLKDVPAGXSTLAAPGAKEKKAVAAGGVEDADADLQERLDALR 220

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BLAST of charged multivesicular body protein 3 vs. L. salmonis genes
Match: EMLSAG00000009635 (supercontig:LSalAtl2s:LSalAtl2s619:80485:81572:-1 gene:EMLSAG00000009635 transcript:EMLSAT00000009635 description:"maker-LSalAtl2s619-augustus-gene-0.7")

HSP 1 Score: 66.6254 bits (161), Expect = 1.783e-13
Identity = 52/172 (30.23%), Postives = 94/172 (54.65%), Query Frame = 0

Query:   41 LFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESL--EDADELEENAQLEVDKVLSEL 210
            LFG+ KT   K  V++  + +RK    ++R    ++ EE K  +  K AAK G+K+   +LAK++VN RK  ++ + A + +S+     K  A+ +K+A ++ ++S  M  M + +   +L  T+++ +    K  + EE+M D  + +  E  DE EE  Q  ++KVL E+
Sbjct:    4 LFGRKKTL--KEQVKDNDRDLRKANREVERDRKKLEMEEKKLEQEIKKAAKSGNKQVCTLLAKQLVNLRKQKNRTFVASSQISAAGYAAKGMASNVKIAEAMGETSRTMGQMNKAMDPKKLAGTLRDFTVANDKMNMTEEVMNDAFDDILGESDDEAEE--QGVINKVLDEI 171

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|363548525|sp|Q5BKM3.4|CHMP3_XENTR (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein-sorting-associated protein 24)

HSP 1 Score: 211.46 bits (537), Expect = 1.504e-67
Identity = 111/196 (56.63%), Postives = 150/196 (76.53%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP 233
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+RE+ K  RS K +AK+G++E+  +LAKE+V+++K+V+KLY +KAHM+S+   MK Q A L+++GSLQKS+EVMKAMQ L+KIPE+Q TM++LSKEMMKAGIIEEM+EDT E +ED DE+EE A++E+D++L E+ A    +L KA  P    D LPEP
Sbjct:    1 MGLFGKTQERPPKDLVNEWSLKIRKEMRVIDRQIRDIQREQEKVKRSIKESAKKGNREACVILAKEVVHSKKAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTFEGMEDQDEMEEQAEMEIDRILFEITAG---ALGKA--PSKVTDALPEP 191

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917768|sp|Q6NRM7.3|CHMP3_XENLA (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein-sorting-associated protein 24)

HSP 1 Score: 210.305 bits (534), Expect = 3.440e-67
Identity = 111/196 (56.63%), Postives = 149/196 (76.02%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP 233
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+RE+ K  RS K +AK+G++E+  +LAKE+V ++K+V+KLY +KAHM+S+   MK Q A L+++GSLQKS+EVMKAMQ L+K+PE+Q TM+ELSKEMMKAGIIEEM+EDT E +ED DE+EE A++E+D++L E+ A    +L KA  P    D LPEP
Sbjct:    1 MGLFGKTQERPPKDLVNEWSLKIRKEMRVIDRQIRDIQREQEKVKRSIKESAKKGNREACVILAKEVVQSKKAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKLPEIQATMRELSKEMMKAGIIEEMLEDTFEGMEDQDEMEEQAEMEIDRILFEVTAG---ALGKA--PSKVTDALPEP 191

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917767|sp|Q8CGS4.3|CHMP3_RAT (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24; Short=rVps24p)

HSP 1 Score: 205.297 bits (521), Expect = 4.388e-65
Identity = 132/228 (57.89%), Postives = 166/228 (72.81%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP-----IQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G KE   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE+Q TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP     +   E  +E+ EEDL AMQ RL  LRS
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKA--PSKVTDALPEPEPAGAMAASEGDEEDDEEDLEAMQSRLATLRS 223

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917765|sp|Q9CQ10.3|CHMP3_MOUSE (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24)

HSP 1 Score: 204.142 bits (518), Expect = 1.012e-64
Identity = 134/229 (58.52%), Postives = 166/229 (72.49%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP------IQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G KE   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE+Q TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP         EE  +EE EEDL AMQ RL  LRS
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKA--PSKVTDALPEPEPAGAMAASEEGEEEEDEEDLEAMQSRLATLRS 224

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|116241295|sp|Q58CS7.4|CHMP3_BOVIN (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24)

HSP 1 Score: 201.83 bits (512), Expect = 8.362e-64
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP 233
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G K+   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE+Q TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKA--PSKVTDALPEP 191

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917766|sp|Q5RAU5.3|CHMP3_PONAB (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24)

HSP 1 Score: 201.83 bits (512), Expect = 9.842e-64
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP 233
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G K+   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE+Q TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEI---TAGALGKA--PSKVTDALPEP 191

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917763|sp|Q9Y3E7.3|CHMP3_HUMAN (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Neuroendocrine differentiation factor; AltName: Full=Vacuolar protein sorting-associated protein 24; Short=hVps24)

HSP 1 Score: 201.445 bits (511), Expect = 1.159e-63
Identity = 131/227 (57.71%), Postives = 164/227 (72.25%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP----IQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G K+   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE+Q TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP         E +EE EE L AMQ RL  LRS
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEI---TAGALGKA--PSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 222

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917764|sp|Q4R574.3|CHMP3_MACFA (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24)

HSP 1 Score: 200.29 bits (508), Expect = 3.325e-63
Identity = 129/227 (56.83%), Postives = 164/227 (72.25%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEP----IQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK++   PK +V EWS  IRKE   +DRQI  I+REE K  RS K AAK+G K+   VLAKE++ +RK+VSKLY +KAHM+S+  GMK Q A L++AGSLQKS+EVMKAMQ L+KIPE++ TM+ELSKEMMKAGIIEEM+EDT ES++D +E+EE A++E+D++L E+   T  +L KA  P    D LPEP         + +EE EE L AMQ RL  LRS
Sbjct:    1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIRATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKA--PSKVTDALPEPEPSGAMAASDEEEEEEEALEAMQSRLATLRS 222

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|73917762|sp|Q6NY88.3|CHMP3_DANRE (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein-sorting-associated protein 24)

HSP 1 Score: 188.734 bits (478), Expect = 1.212e-58
Identity = 118/226 (52.21%), Postives = 162/226 (71.68%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEA----KEEVEEDLVAMQERLHALRS 260
            MGLFGK++   PK ++ EWS  IRKE   +DRQI  I+REE K  RS K AAK+G K+   +LAKE++ ++++++KLY +KA M+S+   MK Q + L++AG+LQKS+EVMKAMQ L+KIPE+Q TM++LSKEMMKAGIIEEM+EDT+E ++D +E+EE A+ EVDK+L E+   T  +L KA  P    DLP+P+     A    + E EE++  MQ RL ALRS
Sbjct:    1 MGLFGKTQEKPPKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEI---TAGALGKA--PSKVTDLPDPVAIGATAAPEEESEEEEEIEEMQSRLAALRS 221

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BLAST of charged multivesicular body protein 3 vs. SwissProt
Match: gi|74854121|sp|Q54P63.1|CHMP3_DICDI (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Vacuolar protein-sorting-associated protein 24)

HSP 1 Score: 133.265 bits (334), Expect = 3.216e-37
Identity = 89/220 (40.45%), Postives = 137/220 (62.27%), Query Frame = 0

Query:   41 LFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            +F   K P P+ +V++W + +R+E   +D Q+ AI  +E K +R  K   K GD++SAK LAKEIVN+RK+  ++YTAKA M+S+   +++  A  K+ G+L KS+E+MK M  LIK+PEL K M  +  EM KAGI+EEM+ D  +     ++LEE A++EV+K++ E+L      +S  +V  A    P     +EE  +E +ED   + +RL AL+S
Sbjct:    1 MFSFLKKPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAKEIVNSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNKVMMAMGSEMTKAGIMEEMISDVFDM--QGEDLEEEAEMEVNKIMDEIL------VSGPQVSSA----PLETHQQEEVVQEKQED-SELLDRLKALKS 207

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BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|225710916|gb|ACO11304.1| (Charged multivesicular body protein 3 [Caligus rogercresseyi])

HSP 1 Score: 238.81 bits (608), Expect = 8.466e-76
Identity = 126/223 (56.50%), Postives = 177/223 (79.37%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKA-RVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFG+SK+P+PK  V EW K IRKEGY +DRQI  I+REELK +RS K+AAK+GDK+S K+LA+E+V +RK+VSK+YTAKA+++S+E  MK QAA++++AG+L +S+EVM +MQ+LIK+PE+  TM ELSKEMMKAGI EEMMED +++  + +ELEE+ Q EVDKVL+E+     K++  A  VP+ASID+PE   ++E+ +E +++    M+ERL AL+S
Sbjct:    1 MGLFGRSKSPNPKEQVNEWCKKIRKEGYNLDRQIRQIQREELKVVRSIKIAAKRGDKDSCKILAREVVQSRKAVSKIYTAKANLNSVEMQMKNQAAEVRLAGALSQSTEVMVSMQKLIKLPEISATMTELSKEMMKAGIFEEMMEDVLDT--EPEELEEDVQKEVDKVLAEITEGDRKTMEGAPSVPQASIDVPEKESEDEDEEEGIKD----MKERLQALKS 217

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BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|225719188|gb|ACO15440.1| (Charged multivesicular body protein 3 [Caligus clemensi])

HSP 1 Score: 236.113 bits (601), Expect = 7.834e-75
Identity = 129/223 (57.85%), Postives = 176/223 (78.92%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKA-RVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFG+SK+P PK  V EW K +RKEGY +DRQI  I+REE+K  RS K +AK+GDK+S ++LAKE+V +RK+VSK+YTAKA+++S+E  MK QAAQ+++AG+L KS+EVM  MQ+L+K+PE+  TMQELSKEMMKAGI EEMMED M++  + +ELE++ Q EVDKV++EL     K++ KA  VP+ASID+PE  +++ E +EE EE +  M+ERL AL+S
Sbjct:    1 MGLFGRSKSPSPKDRVNEWCKKLRKEGYNLDRQIRQIQREEMKVTRSIKESAKRGDKDSCRILAKEVVQSRKAVSKIYTAKANLNSVEMQMKNQAAQVRLAGTLSKSTEVMVCMQKLVKLPEIASTMQELSKEMMKAGIFEEMMEDVMDN--EPEELEDDVQNEVDKVMAELTEGDRKTIEKAPSVPKASIDVPE--REDSEEEEEEEEGIKDMKERLEALKS 219

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BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|225719462|gb|ACO15577.1| (Charged multivesicular body protein 3 [Caligus clemensi])

HSP 1 Score: 235.343 bits (599), Expect = 1.874e-74
Identity = 129/223 (57.85%), Postives = 174/223 (78.03%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKA-RVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFG+SK+P PK  V EW K +RKEGY +DRQI  I+REE+K  RS K +AK+GDK+S ++LAKE+V +RK+VSK+YTAKA+++S+E  MK QAAQ+++AG+L KS+EVM  MQ+L+K+PE+  TMQELSKEM+KAGI EEMMED M++  + +ELE++ Q EVDKV++EL     K++ KA  VP+ASID+PE    EEE +EE  +D   M+ERL AL+S
Sbjct:    1 MGLFGRSKSPSPKDRVNEWCKKLRKEGYNLDRQIRQIQREEMKVTRSIKESAKRGDKDSCRILAKEVVQSRKAVSKIYTAKANLNSVEMQMKNQAAQVRLAGTLSKSTEVMVCMQKLVKLPEIASTMQELSKEMVKAGIFEEMMEDVMDN--EPEELEDDVQNEVDKVMAELTEGDRKTIEKAPSVPKASIDVPEREDSEEEEEEEGIKD---MKERLEALKS 218

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|1130216769|ref|XP_019756246.1| (PREDICTED: charged multivesicular body protein 3 [Dendroctonus ponderosae] >gi|478259581|gb|ENN79434.1| hypothetical protein YQE_04078, partial [Dendroctonus ponderosae] >gi|546686694|gb|ERL95804.1| hypothetical protein D910_00332 [Dendroctonus ponderosae] >gi|546687578|gb|ERL96217.1| hypothetical protein D910_01476 [Dendroctonus ponderosae])

HSP 1 Score: 224.557 bits (571), Expect = 3.451e-70
Identity = 125/227 (55.07%), Postives = 169/227 (74.45%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEAK-----EEVEEDLVAMQERLHALRS 260
            MGLFGKS   +PK MV EW+  +RKEGY +DRQ+N+IKREE K  RS K AAK+GDK++  +LAKEI+ ARK+V+K+YT+KAH++S+   MK Q A L++AGSLQKS+EVM+AMQ LI+ PE+ +TMQE+SKEMMKAGIIEEM+++T E LED++E+EE AQ EVDKVL E        +++ ++ EA +   EP +  +E++     EE E +L  MQ RL AL+S
Sbjct:    1 MGLFGKSSDRNPKEMVTEWNHKLRKEGYQLDRQVNSIKREEEKVKRSLKEAAKKGDKDTCTILAKEIIRARKAVNKIYTSKAHLNSVMLQMKNQLATLRVAGSLQKSTEVMQAMQSLIRTPEVARTMQEMSKEMMKAGIIEEMLDETFEGLEDSEEMEEAAQSEVDKVLFE--------ITEGKIGEAPLPPSEPAEKIKESQGPAGEEEDETELEEMQSRLAALKS 219

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|1101362728|ref|XP_018907048.1| (PREDICTED: charged multivesicular body protein 3 [Bemisia tabaci])

HSP 1 Score: 223.402 bits (568), Expect = 7.807e-70
Identity = 121/226 (53.54%), Postives = 167/226 (73.89%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMES-LEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEAKEEV---EEDLVAMQERLHALRS 260
            MGLFGKS+  DPK  V EW+  IRKEGY +DRQINAIKREE K  R+ K AAK+GDK+   +LAKEI++ARK++ K++T+KAH++SI+  MK Q   L++AGSLQKS+EVM+AMQ+L+++PE+  TM+E+SKEMMKAGIIEEM+++TM+S ++D +++EE  Q EVDK+L E+   T   L +A  P A  D P+ +    +A+E     E++L  MQ RL ALR 
Sbjct:    1 MGLFGKSRETDPKAQVNEWTHKIRKEGYQLDRQINAIKREEEKVKRTLKEAAKKGDKDVCLILAKEILSARKTIQKIHTSKAHLNSIQLQMKNQLGVLRVAGSLQKSTEVMQAMQRLVRVPEVAATMREMSKEMMKAGIIEEMLDETMDSVVDDPEDMEEEVQGEVDKILWEI---TEGQLGQA--PAAVTDTPQSVPGTSKAEESTVDDEKELEEMQNRLQALRG 221

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|1238881693|ref|XP_022253812.1| (charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881695|ref|XP_022253813.1| charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881697|ref|XP_022253814.1| charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881699|ref|XP_022253815.1| charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881701|ref|XP_022253816.1| charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881703|ref|XP_022253817.1| charged multivesicular body protein 3-like [Limulus polyphemus] >gi|1238881705|ref|XP_022253818.1| charged multivesicular body protein 3-like [Limulus polyphemus])

HSP 1 Score: 221.861 bits (564), Expect = 3.328e-69
Identity = 122/223 (54.71%), Postives = 162/223 (72.65%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASID-LPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGKS    PK  V+EW+  IRKEGY +DRQI +I+REE K  RS K AAK+GD++   +LAKE++ ARK+V +++  KA ++S+   M  Q A L+++GSLQ+S+E+MK+MQ LIK+PE+ KTM +LS+EMMKAGIIEEM++DTMES+ED DELEE+AQ EVDK+L EL   T   L KA  P A  D LPE  + E  +    +ED+  MQ+RL ALR+
Sbjct:    1 MGLFGKSPEISPKDQVREWTSKIRKEGYQLDRQIRSIQREEEKVKRSLKDAAKKGDRDVCTILAKEVLRARKAVGRIHVTKAQLNSVMMSMNHQLATLRVSGSLQRSTEIMKSMQNLIKVPEVAKTMHDLSREMMKAGIIEEMLDDTMESMEDQDELEEDAQEEVDKILWEL---TAGELGKA--PAAVSDTLPEHKETEGASALVEDEDVSEMQDRLEALRN 218

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|817076178|ref|XP_012260348.1| (charged multivesicular body protein 3 [Athalia rosae])

HSP 1 Score: 220.705 bits (561), Expect = 9.870e-69
Identity = 119/228 (52.19%), Postives = 168/228 (73.68%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLP--EPI----QDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGKS   +PK MVQEW+  +RKEGY +DRQ+ AI+REE K  RS K AAK+GDK+   +LAKE++ ARK+ +K+YT+KAH++S+   MK Q A +++AGSL KS+EVM+AMQ L+K+PE+  TM+E+SKEMMKAGIIEEM+++TM+S+ED++++E+ AQ EVDKVL E+   T  +L  A  P    + P  +P+      EEEA++  + +L  M+ RL +LRS
Sbjct:    1 MGLFGKSPEQNPKEMVQEWTHKLRKEGYQLDRQVRAIQREEDKVKRSLKEAAKKGDKDVCTILAKEVLRARKACTKIYTSKAHLNSVSLQMKNQLATIRVAGSLSKSTEVMQAMQSLVKVPEVAATMREMSKEMMKAGIIEEMLDETMDSIEDSEDMEDEAQEEVDKVLWEV---TAGALGTA--PAVVTETPGVQPVAASTSKEEEAEDVDDTELEEMKNRLQSLRS 223

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|1059382015|ref|XP_017785822.1| (PREDICTED: charged multivesicular body protein 3 [Nicrophorus vespilloides])

HSP 1 Score: 220.32 bits (560), Expect = 1.284e-68
Identity = 125/223 (56.05%), Postives = 168/223 (75.34%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPE-ASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK+   +PK MV EW+  +RKEGY +DRQI AI+REE K  +S K AAK+GDK+++ +LAKEI+ ARK+V+K+YT+KAH++S++  MK Q A L++AGSL KS+EVM AMQ+L++IPE+ +TMQ++SKEMMKAGIIEEM+++T E +ED DE+E+ AQ+EVDKVL EL   T   L +A +P      + E  + E E  EE EE+L  MQ RL ALRS
Sbjct:    1 MGLFGKTPERNPKDMVNEWTHKLRKEGYQLDRQIRAIQREEDKVKKSLKEAAKKGDKDASVILAKEIIRARKAVTKIYTSKAHLNSVQLQMKNQLATLRVAGSLAKSTEVMHAMQRLVRIPEVAQTMQDMSKEMMKAGIIEEMLDETFEGMEDQDEMEDAAQVEVDKVLWEL---TEGKLGEAPLPPVGDTGMGEAAKPEVEEHEEDEEELEEMQSRLAALRS 220

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|768430069|ref|XP_011556243.1| (PREDICTED: charged multivesicular body protein 3 [Plutella xylostella])

HSP 1 Score: 218.779 bits (556), Expect = 5.838e-68
Identity = 126/222 (56.76%), Postives = 162/222 (72.97%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKARVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGKS   +PK MV EWS  +RKEGY ++RQI AI+REE K  RS K AA + DK+   +LAKEI+ +RK++SK+YT+KAH++S++  MK Q A L++AGSLQKS+EVM+AMQ L+++PE+  TMQELSKEMMKAGIIEEM+++TM  LED +E+EE AQ E+DKVL EL   T   L +A  P  ++  P   Q E EA E  E +L  MQ RL ALRS
Sbjct:    1 MGLFGKSPERNPKEMVNEWSHKLRKEGYNLERQIRAIQREEEKIKRSLKEAATKNDKQVCNILAKEIIRSRKAISKIYTSKAHLNSVQMQMKNQLATLRVAGSLQKSTEVMQAMQSLVRLPEIAHTMQELSKEMMKAGIIEEMLDETMSGLEDEEEMEEAAQGEIDKVLWEL---TQGKLGEAPAPPTAVGAPSTSQ-ETEAPEPDESELDEMQTRLEALRS 218

[Close]

BLAST of charged multivesicular body protein 3 vs. nr
Match: gi|939670696|ref|XP_014282085.1| (PREDICTED: charged multivesicular body protein 3 isoform X1 [Halyomorpha halys])

HSP 1 Score: 218.394 bits (555), Expect = 6.726e-68
Identity = 126/227 (55.51%), Postives = 167/227 (73.57%), Query Frame = 0

Query:   39 MGLFGKSKTPDPKTMVQEWSKGIRKEGYAMDRQINAIKREELKALRSAKMAAKQGDKESAKVLAKEIVNARKSVSKLYTAKAHMSSIENGMKAQAAQLKMAGSLQKSSEVMKAMQQLIKIPELQKTMQELSKEMMKAGIIEEMMEDTMESLEDADELEENAQLEVDKVLSELLADTNKSLSKA-----RVPEASIDLPEPIQDEEEAKEEVEEDLVAMQERLHALRS 260
            MGLFGK++  DPKT V EW+  IRKEGY +DRQI +I+REE K  RS + AAK+GDK    +LAKE++ ARK++SK++T+KAH++SI+  MK Q A L++ GSLQKS+EVM++MQ+LIK+PE+  TM+ELSKEMM+AGIIEEM+E+TM+++ED +E+EE AQ E+DKVL E+   T  +L KA       P AS  + EP      A EE  E+L  MQ RL ALRS
Sbjct:    1 MGLFGKTQKEDPKTQVNEWTHKIRKEGYQLDRQIRSIQREEEKVKRSLREAAKKGDKAVCTILAKEVLGARKAISKIHTSKAHLNSIQMQMKNQLATLRVCGSLQKSTEVMQSMQRLIKVPEVAATMRELSKEMMRAGIIEEMLEETMDTIEDPEEMEEQAQEEIDKVLWEI---TQGTLGKAPAAVTETPGASAVVAEP------AVEEDPEELKEMQSRLEALRS 218

The following BLAST results are available for this feature:

BLAST of charged multivesicular body protein 3 vs. L. salmonis genes
BLAST of charged multivesicular body protein 3 vs. SwissProt
BLAST of charged multivesicular body protein 3 vs. nr

BLAST of charged multivesicular body protein 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAG00000000626	1.297e-79	59.20	supercontig:LSalAtl2s:LSalAtl2s109:757972:765988:1...	[more]
EMLSAG00000001138	2.964e-17	28.31	supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1...	[more]
EMLSAG00000009635	1.783e-13	30.23	supercontig:LSalAtl2s:LSalAtl2s619:80485:81572:-1 ...	[more]

BLAST of charged multivesicular body protein 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|363548525\|sp\|Q5BKM3.4\|CHMP3_XENTR	1.504e-67	56.63	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917768\|sp\|Q6NRM7.3\|CHMP3_XENLA	3.440e-67	56.63	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917767\|sp\|Q8CGS4.3\|CHMP3_RAT	4.388e-65	57.89	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917765\|sp\|Q9CQ10.3\|CHMP3_MOUSE	1.012e-64	58.52	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|116241295\|sp\|Q58CS7.4\|CHMP3_BOVIN	8.362e-64	59.69	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917766\|sp\|Q5RAU5.3\|CHMP3_PONAB	9.842e-64	59.69	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917763\|sp\|Q9Y3E7.3\|CHMP3_HUMAN	1.159e-63	57.71	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917764\|sp\|Q4R574.3\|CHMP3_MACFA	3.325e-63	56.83	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|73917762\|sp\|Q6NY88.3\|CHMP3_DANRE	1.212e-58	52.21	RecName: Full=Charged multivesicular body protein ...	[more]
gi\|74854121\|sp\|Q54P63.1\|CHMP3_DICDI	3.216e-37	40.45	RecName: Full=Charged multivesicular body protein ...	[more]

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BLAST of charged multivesicular body protein 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225710916\|gb\|ACO11304.1\|	8.466e-76	56.50	Charged multivesicular body protein 3 [Caligus rog...	[more]
gi\|225719188\|gb\|ACO15440.1\|	7.834e-75	57.85	Charged multivesicular body protein 3 [Caligus cle...	[more]
gi\|225719462\|gb\|ACO15577.1\|	1.874e-74	57.85	Charged multivesicular body protein 3 [Caligus cle...	[more]
gi\|1130216769\|ref\|XP_019756246.1\|	3.451e-70	55.07	PREDICTED: charged multivesicular body protein 3 [...	[more]
gi\|1101362728\|ref\|XP_018907048.1\|	7.807e-70	53.54	PREDICTED: charged multivesicular body protein 3 [...	[more]
gi\|1238881693\|ref\|XP_022253812.1\|	3.328e-69	54.71	charged multivesicular body protein 3-like [Limulu...	[more]
gi\|817076178\|ref\|XP_012260348.1\|	9.870e-69	52.19	charged multivesicular body protein 3 [Athalia ros...	[more]
gi\|1059382015\|ref\|XP_017785822.1\|	1.284e-68	56.05	PREDICTED: charged multivesicular body protein 3 [...	[more]
gi\|768430069\|ref\|XP_011556243.1\|	5.838e-68	56.76	PREDICTED: charged multivesicular body protein 3 [...	[more]
gi\|939670696\|ref\|XP_014282085.1\|	6.726e-68	55.51	PREDICTED: charged multivesicular body protein 3 i...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold604_size126151	supercontig	scaffold604_size126151:88839..92192 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:protein transport

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold604_size126151-snap-gene-0.32-mRNA-1	maker-scaffold604_size126151-snap-gene-0.32-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold604_size126151:88839..92192-

gene from alignment at scaffold604_size126151:88839..92192-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold604_size126151-snap-gene-0.32 ID=maker-scaffold604_size126151-snap-gene-0.32|Name=charged multivesicular body protein 3|organism=Tigriopus kingsejongensis|type=gene|length=3354bp|location=Sequence derived from alignment at scaffold604_size126151:88839..92192- (Tigriopus kingsejongensis)
GCGGATTGGGCTGCTTTTCGTGGACAAACACAGCTTTGGTAGCAAAACAA
ACGCCAGTGAAAGTGGGAACAGATTGGAAATCCCCAACTTCCGAGTCCGG
GTGAAGATAGCAAGAATCACGAGTAAGTAGCTGTCCTTTTGGTGTGGCTG
TAATCTGGGCCTAATGATGCAATTGCTCCCTAGACATGGGTCTGTTTGGC
AAGTCCAAGACCCCCGATCCCAAGACCATGGTGCAGGAATGGTCCAAGGG
GATCCGCAAGGAAGGTTATGCCATGGACCGTCAGATCAATGCCATCAAGC
GCGAAGAGCTCAAGGCTCTCAGGTCTGCCAAAATGGCGGCCAAGCAGGGC
GATAAGGAGTCGGCAAAGGTCTTGGCCAAGGAAATAGTCAACGCACGCAA
GAGCGTGAGCAAGCTATACACGGCCAAGGCTCACATGTCCTCCATCGAAA
ACGGCATGAAGGCCCAAGCTGCCCAGCTGAAGATGGCTGGCTCACTCCAG
AAGTCCTCCGAAGTGATGAAAGCCATGCAGCAGCTCATCAAGATCCCCGA
GCTTCAGAAGACCATGCAAGAGTTGTCAAAAGAAATGATGAAGGTACGCA
TTGCTCATATTTAAAAGGGCCTCGGGTGAGACATTATCCAGAATAGCGTG
CATGCGAGGCATGACTAGGACCTATTGACTGACTCGGTTGGACGATGCAA
CCTCTGGGTGGAACTAATTTCTGCGTTCGCTCGAAAAACCCGACCACTTG
TATTGTACGTATTGTACGTATTTCGGATTTTGACACCCGCGACTAGAGAT
ATACAATTATGTATGTCTTCACAATAGACGTAATACATTGAAGAGGTGGC
TGGTCAAGATCTGACGCATTCCCATGTTGACGTGATGGTGTTGAAGGTGG
AGGAGGAGGGGCTTGAACCGAGGTTCTTCCTGACTCCAGGAAAGTGTCTT
GACCACTACACCAATTCGCCCCACTACGCTGGGAACTTGGGAACCATTTC
GGTTGACTCAGAGGCAACGAAACCTCTCATCCCCACATGGGGTGCCAGAT
GAAGTCTCTACATCCCACTGGACTAGGACTGCAACCAAATAGGTTCATAT
CTTGACGTGCGCTACTATCGAAACTCCTCGAACAGACTCGAGGATTGTGA
ACACTACATTTCAGCCTACCGAAAATCAGCCTAAAAAATATAACAATTTC
GGTGTTTTCAGGCACGTTCATGACTAATGCGGGCTAGTTATCAATGATTG
GACACAAATAGATATGAGCCAAATGGGTCAGTGATATTGAAATAACCTAC
GATAGGAACAAATTAGTAGAAAGATAACAAAAAAGATCGATAATGAATGG
GCAAAAGGATTATGGAATGGTAAGGAAAACAACATGGGGATAGATAAAAA
GACTACTTACGTACCAGGTGAACCGTGTTATCGTGTGCAATTTTACTTTT
GATAATGACCGTAATACGATGCATCGGAGATGAAAGTCCCGTGTCAAAGG
AAAATCTCCGTTGATGGTGACTTAAGTTTTCGTTCGATTCGGTAAAGTAA
TATTGAAAAGGCGATAAAATGAGCGAGCCACGGAAAACAAAAATCGAGCA
CCGAGGCTGATGATTAGTCAAAGGCCTTTTCCGAAGGCTTCTAGGTGCAC
AGAAACACCGCATACTGAGACCAAGGACTACTAAATCAAGAGGACGGAAT
TATATTTTTCCTGCCTTCCACAGGGGGCCTATAGTGATCTTAAAAAAGGG
TAGAGGAGAGTGAGATTCGAAATCTTATCCCATTGCTACTTAATTTGAGT
AAAACAGCCCACCATAAATGAGATACAGACTTTTGAAATTTCTTAATTTA
TATGGAAATGTGTTTAAAATAAAATATGAAAATAGGTGTATGGATTTAAA
AAAAGGTTCATGTCCGGTAGTCAGCCCTTTGCCACCCAAGTCTAGTCAGT
TGTGTTTGGGCATTTTATAATATAATACATACATAGCGTAAAAATAAATT
TTCTCTAAATGAGCAACAGACTTTTGAGCTCTCTGTATTTAGATGCTTGG
TTTACCCAAATAAGTAGGAAGTGGAATCTGGTTTGAAATATCACTCCCGT
CTACGTACTGTTTATTATTATCAACATAGGCCCCTTGTGAAAGGCGGGAA
AAAAGAGAATTCCGTCCTCATGATTTACGTCCTTGACTGAGACGAAAGGC
TATCTTTACGAGGCCATTAATTGCCTTGATAATCTCATGAGTCCTTGAAG
GCCGCGATCTACCGCCCATCTGGGGTGAATTAAAGTTTAATTACAAAAAA
ACACCATCTTGGGCTTGGATGGATAGGACAGAGAACGAAAGAAATAACAC
ATCAGCGACTAGGAATTGCATATCTACACCACAAGATGCCCTTCAAACGG
AACCAAAATGTCTGTGTAACTTTTTTTGAAGTTTGGTGAAGTTTTTTGAA
AGTTCAAAATAGTCGTGTTTTTCAAAGTCACAGAGACAAGTAGGTACGGT
TCTGTTTGGAGGGTCAGAACGGGTTGCGCGAATGACCTCGATTTAAATTA
TCCTAACGTCGCAAGCTTTGACTCGACCAAGTATTTAACTTGAAAAGTTC
GGTCTAAAGAAGCATTCGGTCAGTTTGATGATAATTAGCACAAACCTCGA
GATTACAATATTTGCGAAGTTAACGAGACATTCCGGTTGCGTTTGGAGGG
CACCTCGTAGTTCAAGTAGTTAAAGAAAGTGGAGACTAGAACAGGAAAAT
TCAGATTCCTAACTCGCGAGGAAGCAAAGGGAGCCGATTACCTATTACCG
AGAACAGTATTGACTAGTATTCGTATGCCAAGTGTTGACTCTGGGGCAAA
TAAACCTATTTTTTATATGTAGGAATACACGATTACACACCCACACACAG
GGAGCATTTCATGCTAGTGTATTAATGTCTGATGACCAAATCGAGTCACT
GACGTAGTTCCCACCACACTCGTTCTCCTTTCTAGGCGGGAATTATTGAG
GAAATGATGGAAGACACCATGGAGAGTCTCGAAGATGCCGATGAGCTGGA
GGAGAATGCCCAGCTCGAAGTGGACAAGGTCTTGTCAGAACTCTTGGCCG
ATACCAACAAATCCCTATCCAAAGCCCGAGTGCCAGAAGCCTCCATCGAC
CTCCCAGAGCCCATTCAGGACGAGGAAGAGGCAAAGGAAGAGGTGGAGGA
AGATTTAGTAGCGATGCAAGAAAGGCTCCATGCCCTACGCAGCTGAACAC
GTGTTACCAAAGAAGGACGGCATTTTTAATTTTGTTAACTTAACCAGGGA
AATGCTACAACAAATTGAAGTCATTGTTGAAATATAATCGTGAACTAACA
TAAA

Synonyms

The feature 'charged multivesicular body protein 3' has the following synonyms


Synonym
Tk08222

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