hypothetical protein, maker-scaffold618_size123335-snap-gene-0.25 (gene) Tigriopus kingsejongensis

Overview
Namehypothetical protein
Unique Namemaker-scaffold618_size123335-snap-gene-0.25
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000003897 (supercontig:LSalAtl2s:LSalAtl2s210:524762:546864:-1 gene:EMLSAG00000003897 transcript:EMLSAT00000003897 description:"maker-LSalAtl2s210-augustus-gene-5.19")

HSP 1 Score: 107.842 bits (268), Expect = 1.334e-30
Identity = 48/112 (42.86%), Postives = 75/112 (66.96%), Query Frame = 0 
Query:   70 RTVITYLGTDFILPDGCPLPACDPEDRICNRKSNEMEQRYNNCIRGEDAKHLGCVTD-VLPTKR--TITIPVYANFCSAFCYEKDIGAVNKLEHCPHAGAKHEVDPNLFSLF 178
            +++I YLGT+++LPDGCP PAC+     C R  + +   Y++C++ +D +H+GC+TD ++P ++  TITIP+YA  CSA CYE D   + K+  CP+ G +   DP+L  LF
Sbjct:   35 KSIINYLGTNYLLPDGCPXPACNRNSEDCKRTVDMVRALYSHCLQSQDGQHIGCITDRLIPGQKSSTITIPIYATLCSAMCYEPDPEKIIKIHRCPYPGYRRH-DPHLNLLF 145
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BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000006223 (supercontig:LSalAtl2s:LSalAtl2s33:44486:45408:-1 gene:EMLSAG00000006223 transcript:EMLSAT00000006223 description:"snap_masked-LSalAtl2s33-processed-gene-0.16")

HSP 1 Score: 87.4261 bits (215), Expect = 1.810e-22
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 0 
Query:   69 FRTVITYLGTDFILPDGCPLPACDPEDRICNRKSNEMEQRYNNCIRGEDAKHLGCVTDVLPTKRTITIPVYANFCSAFCYEK-DIGAVNKLEHCPHAGAKH 168
            F++V+ YLGTDF++ DGC LP C+P    C +   E    + +C    ++  + C+TD+LP    ITIPV+AN CSA CY K D     ++  CP++G K 
Sbjct:   38 FKSVVKYLGTDFVMYDGCVLPKCNPAVASCGKFKKETAIEFYHCEGTNNSGVVACLTDILPNDTNITIPVFANICSAQCYLKDDPKTFQRIHPCPYSGFKQ 138
The following BLAST results are available for this feature:
BLAST of hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000038971.334e-3042.86supercontig:LSalAtl2s:LSalAtl2s210:524762:546864:-... [more]
EMLSAG000000062231.810e-2240.59supercontig:LSalAtl2s:LSalAtl2s33:44486:45408:-1 g... [more]
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BLAST of hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold618_size123335supercontigscaffold618_size123335:83400..84317 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold618_size123335-snap-gene-0.25-mRNA-1maker-scaffold618_size123335-snap-gene-0.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold618_size123335:83400..84317+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold618_size123335-snap-gene-0.25 ID=maker-scaffold618_size123335-snap-gene-0.25|Name=hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=918bp|location=Sequence derived from alignment at scaffold618_size123335:83400..84317+ (Tigriopus kingsejongensis)
GGCCAACTTATCTCATCGTGGATTGGTGTCCTTGCTTGGCATCAGTTCAA
GATTACAGCTCGACCAAGTTGAACCTTTGGCCGTGGGTAAATCCTCTTCT
TTCAAACCGAACACAAATCAAACCATTCTAAATCCAAACAAAATGGCCTC
GTTTCAATCCCAATTGTAAGTTGAACATCACACAGTCCACCAATGTCAAC
GCAGGCGGCCTCAAAACTGCAAGTCACCCGCTAATTTTTCCAACCTTGGC
CAAGCCCCGATGAAAAATCACCCCCGCAAACACTCGAAGGGCCGGGCTAA
AAAGTCCCCAATCATTTCCTGTTGCATCTGGTGCTAATTGAATGTCTCCT
ACCATAAACACTGTCGAAACATTACAGGTTCTCGCTATTGGCTACCTTGG
CCATGATTGGCATCTTTACCGTGGAAGCGCAATCCGATTTCAGAACCGTA
ATCACATACCTGGGTACAGATTTCATCCTGCCCGATGGTTGTCCCCTCCC
AGCTTGTGATCCCGAAGATCGAATTTGCAATCGCAAGAGCAATGAAATGG
AACAGCGATACAACAACTGCATTCGGTACGGTTACAATCCGGAGCGATTT
TAATGTTTATTATTTAGGGCCAGCCGCGGACTGGTGCCAGCCCGAGTCAC
GAAACCTTTGTAAACACTTTATCTCCCCTGCCATTTCAGCGGCGAGGACG
CCAAGCATTTGGGCTGCGTGACCGATGTCTTGCCCACCAAGAGGACCATC
ACCATTCCCGTCTATGCCAATTTTTGCTCAGCATTCTGCTACGAGAAAGA
CATTGGAGCGGTTAACAAGCTTGAGCACTGTCCTCATGCTGGTGCCAAGC
ACGAAGTTGATCCCAATTTGTTCAGTCTTTTCTAGTTTATGTGTGTCAAA
GTTGAAATAGAAAACATT
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Synonyms
The feature 'hypothetical protein' has the following synonyms
Synonym
Tk08351
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