transcription initiation factor tfiid subunit 12, maker-scaffold660_size117387-snap-gene-0.27 (gene) Tigriopus kingsejongensis

Overview
Nametranscription initiation factor tfiid subunit 12
Unique Namemaker-scaffold660_size117387-snap-gene-0.27
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of transcription initiation factor tfiid subunit 12 vs. L. salmonis genes
Match: EMLSAG00000002482 (supercontig:LSalAtl2s:LSalAtl2s1483:85786:88142:1 gene:EMLSAG00000002482 transcript:EMLSAT00000002482 description:"maker-LSalAtl2s1483-augustus-gene-0.22")

HSP 1 Score: 178.718 bits (452), Expect = 6.602e-55
Identity = 83/141 (58.87%), Postives = 112/141 (79.43%), Query Frame = 0 
Query:   10 SVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            S+P S   P T V   ++          PS    QVLD++RL++LVKEVD  EQLD++VE+LLLHIADDFIEQ V+A+C+LA+HRKAP+IEVRDVQ +LERNWNM++PG+G+E++R +K+S++ EAH+SRMALI+KT+KKY
Sbjct:  357 SLPASPGDPTTPVAAQNSVEPLPTEFSKPSE--TQVLDRKRLQQLVKEVDPNEQLDEDVEELLLHIADDFIEQTVSATCALAKHRKAPTIEVRDVQFILERNWNMWVPGYGTEEVRPYKKSAMTEAHRSRMALIKKTLKKY 495
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|47117262|sp|Q8VE65.1|TAF12_MOUSE (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=Transcription initiation factor TFIID 20 kDa subunits; Short=TAFII-20; Short=TAFII20)

HSP 1 Score: 160.999 bits (406), Expect = 3.250e-50
Identity = 81/157 (51.59%), Postives = 109/157 (69.43%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDT--------GSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S    P++ PP  ++  S T        G+G  +     S +  QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSSFSSVKPEPASTPPQGSMANSTTVGKIAGTPGTGGRL-----SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|3024708|sp|Q16514.1|TAF12_HUMAN (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=Transcription initiation factor TFIID 20/15 kDa subunits; Short=TAFII-20/TAFII-15; Short=TAFII20/TAFII15)

HSP 1 Score: 159.073 bits (401), Expect = 1.729e-49
Identity = 80/152 (52.63%), Postives = 107/152 (70.39%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTG---SGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S    P++ PP  ++  S       G+  A    S +  QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSNFSSIKPEPASTPPQGSMANSTAVVKIPGTPGAGGRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|119367383|sp|Q3T174.1|TAF12_BOVIN (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=Transcription initiation factor TFIID 20/15 kDa subunits; Short=TAFII-20/TAFII-15; Short=TAFII20/TAFII15)

HSP 1 Score: 158.688 bits (400), Expect = 2.426e-49
Identity = 80/157 (50.96%), Postives = 108/157 (68.79%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDT--------GSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S    P++ PP  ++  S          G+G  +     S +  QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSNFSSIKPEPASTPPQGSMANSTAVVKIPGTPGTGGRL-----SPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|3024710|sp|Q91858.1|TAF12_XENLA (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=TFIID subunit p22; AltName: Full=Transcription initiation factor TFIID 20/15 kDa subunits; Short=TAFII-20/TAFII-15; Short=TAFII20/TAFII15)

HSP 1 Score: 152.525 bits (384), Expect = 7.952e-47
Identity = 70/111 (63.06%), Postives = 91/111 (81.98%), Query Frame = 0 
Query:   39 SSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            S +  QVL K++L +LV+EVD  EQLD++VE++LL IADDFIE  V+A+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALI+KT KK
Sbjct:   54 SPEANQVLSKKKLHDLVREVDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIKKTQKK 164
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|1729812|sp|P49905.1|TAF12_DROME (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=TAFII30 alpha; AltName: Full=Transcription initiation factor TFIID 28-alpha kDa/22 kDa subunits; AltName: Full=p28-alpha/p22)

HSP 1 Score: 145.591 bits (366), Expect = 1.009e-43
Identity = 77/162 (47.53%), Postives = 105/162 (64.81%), Query Frame = 0 
Query:   12 PPSAEP----PLTA-----------VNGSDTGSG--------SHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            PP A P    P+T            V+G  TG+G        S+  S A  S+   +L K RL ELV+EVD   QLD++VE+LLL I DDF+E  V ++ + A+HRK+  IEVRDVQL  ER +NM+IPGFG++++R +KR+++ EAHK R+ALIRKT+KKY
Sbjct:   35 PPMASPSQHSPMTNNSNSSSQNGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|75249490|sp|Q940A7.1|TA12B_ARATH (RecName: Full=Transcription initiation factor TFIID subunit 12b; AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1; AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4; AltName: Full=TBP-associated factor 12b; Short=AtTAF12b)

HSP 1 Score: 109.768 bits (273), Expect = 1.677e-27
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIR 144
            L+ AG  S S+  +   P    +G+ T  GS   S   +  T Q+L K+++++LV +VDV+ +LD +VEDLLL +ADDFI+   + +CSLA+HRK+  +E +D+ L LE+N ++ IPGF SED RQ K +   + HK R+A++R
Sbjct:  488 LSHAGQKSVSL--TGSQPEATQSGTTTPGGS---SSQGTEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDKRQTK-TVPTDLHKKRLAMVR 625
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|550540911|sp|B2C6R6.1|TAFCL_ARATH (RecName: Full=Transcription initiation factor TFIID subunit 12b; AltName: Full=Protein CYTOKININ-HYPERSENSITIVE 1; AltName: Full=Protein ENHANCED ETHYLENE RESPONSE 4; AltName: Full=TBP-associated factor 12b; Short=AtTAF12b)

HSP 1 Score: 109.768 bits (273), Expect = 1.776e-27
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIR 144
            L+ AG  S S+  +   P    +G+ T  GS   S   +  T Q+L K+++++LV +VDV+ +LD +VEDLLL +ADDFI+   + +CSLA+HRK+  +E +D+ L LE+N ++ IPGF SED RQ K +   + HK R+A++R
Sbjct:  486 LSHAGQKSVSL--TGSQPEATQSGTTTPGGS---SSQGTEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSEDKRQTK-TVPTDLHKKRLAMVR 623
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|75266219|sp|Q9SR71.1|TAF12_ARATH (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=TBP-associated factor 12; Short=AtTAF12)

HSP 1 Score: 105.531 bits (262), Expect = 3.867e-26
Identity = 44/103 (42.72%), Postives = 72/103 (69.90%), Query Frame = 0 
Query:   45 VLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTM 147
            +L K+ + EL++++D  E+LD EVED+L  IA+DF+E   T  CSLA+HRK+  +E +D+ L +ERNWN+  PGF S++ +  ++    + HK R+A I+K++
Sbjct:  399 ILGKRSIHELLQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSDEFKTFRKPLTTDIHKERLAAIKKSV 501
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|239977647|sp|Q555L9.2|TAF12_DICDI (RecName: Full=Transcription initiation factor TFIID subunit 12)

HSP 1 Score: 103.605 bits (257), Expect = 2.538e-25
Identity = 43/105 (40.95%), Postives = 76/105 (72.38%), Query Frame = 0 
Query:   44 QVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGS-EDIRQHKRSSLNEAHKSRMALIRKTM 147
            +VL K++L EL++++   E++D++ ED+L  +ADDF+E  V  +C+LA+HR + ++EV+D+Q  LE+NWN+ +PGFG+ E  +  K+    E HK R+A ++K++
Sbjct:  440 EVLGKRKLIELLQQISPNEKMDEDAEDILSVLADDFVESTVAFACTLAKHRNSTTLEVKDLQCHLEKNWNIRVPGFGNVEQYKTFKKPHFPENHKLRVAAMKKSI 544
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Match: gi|42559733|sp|Q03761.1|TAF12_YEAST (RecName: Full=Transcription initiation factor TFIID subunit 12; AltName: Full=TAFII-61; Short=TAFII61; AltName: Full=TAFII-68; Short=TAFII68; AltName: Full=TBP-associated factor 12; AltName: Full=TBP-associated factor 61 kDa)

HSP 1 Score: 98.2117 bits (243), Expect = 1.614e-23
Identity = 45/107 (42.06%), Postives = 73/107 (68.22%), Query Frame = 0 
Query:   42 TAQVLDKQRLRELVKEVDVYEQ-----LDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALI 143
            T +V+ K++LRELVK V + E      +D +VE+LLL +ADDF+      SC LA+HRK+ ++E RD+QL LERNWN+ IPG+ +++IR  ++ + ++ +  ++  I
Sbjct:  411 TQRVMSKRKLRELVKTVGIDEGDGETVIDGDVEELLLDLADDFVTNVTAFSCRLAKHRKSDNLEARDIQLHLERNWNIRIPGYSADEIRSTRKWNPSQNYNQKLQSI 517
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BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|225712458|gb|ACO12075.1| (Transcription initiation factor TFIID subunit 12 [Lepeophtheirus salmonis])

HSP 1 Score: 179.874 bits (455), Expect = 6.675e-55
Identity = 83/141 (58.87%), Postives = 112/141 (79.43%), Query Frame = 0 
Query:   10 SVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            S+P S   P T V   ++          PS    QVLD++RL++LVKEVD  EQLD++VE+LLLHIADDFIEQ V+A+C+LA+HRKAP+IEVRDVQ +LERNWNM++PG+G+E++R +K+S++ EAH+SRMALI+KT+KKY
Sbjct:   50 SLPASPGDPTTPVAAQNSVEPLPTEFSKPSE--TQVLDRKRLQQLVKEVDPNEQLDEDVEELLLHIADDFIEQTVSATCALAKHRKAPTIEVRDVQFILERNWNMWVPGYGTEEVRPYKKSAMTEAHRSRMALIKKTLKKY 188
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BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|957855078|ref|XP_014677164.1| (PREDICTED: transcription initiation factor TFIID subunit 12-like [Priapulus caudatus] >gi|957855081|ref|XP_014677165.1| PREDICTED: transcription initiation factor TFIID subunit 12-like [Priapulus caudatus] >gi|957855084|ref|XP_014677166.1| PREDICTED: transcription initiation factor TFIID subunit 12-like [Priapulus caudatus])

HSP 1 Score: 173.326 bits (438), Expect = 6.173e-52
Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 0 
Query:    2 NAAGVMSTSVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            NA G       P+ + P T      +  G+H A+ +    T Q+L+K+RL+ELV+E+D  EQLDD+VE++LL IADDFIE  VT SC LA+HR+A SIEVRDVQL LERNWNM+IPGFGS+D R +K+S+  EAHK RMAL++K +KKY
Sbjct:   65 NAVGQPMIKTSPAMQTPAT-----QSSLGAHSATGSGGGDTGQILNKRRLQELVREIDPNEQLDDDVEEVLLQIADDFIENIVTHSCQLAKHRQASSIEVRDVQLHLERNWNMWIPGFGSDDPRPYKKSTTTEAHKQRMALLKKNLKKY 208
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BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|1316176425|ref|XP_023233721.1| (transcription initiation factor TFIID subunit 12-like isoform X1 [Centruroides sculpturatus] >gi|1316176427|ref|XP_023233722.1| transcription initiation factor TFIID subunit 12-like isoform X2 [Centruroides sculpturatus] >gi|1316176429|ref|XP_023233723.1| transcription initiation factor TFIID subunit 12-like isoform X2 [Centruroides sculpturatus] >gi|1316176431|ref|XP_023233724.1| transcription initiation factor TFIID subunit 12-like isoform X2 [Centruroides sculpturatus] >gi|1316176433|ref|XP_023233725.1| transcription initiation factor TFIID subunit 12-like isoform X2 [Centruroides sculpturatus])

HSP 1 Score: 169.088 bits (427), Expect = 2.700e-50
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 0 
Query:    9 TSVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            TSV P+    +TA+  + TG    +++    S   QVL++QRL++LV+EVD  EQLDD+VE+LLL IADDFIE  VT SC LA+HRK+ ++EV+DVQL LE+NWNM+IPGFGSE++R +KRS   EAHK RMALIRK++KKY
Sbjct:   71 TSVNPAN---MTAIVKAVTGGTERLSTI---SDGTQVLNRQRLQDLVREVDPNEQLDDDVEELLLQIADDFIENVVTTSCLLAKHRKSNTLEVKDVQLSLEKNWNMWIPGFGSEELRPYKRSCTTEAHKQRMALIRKSLKKY 206
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|1316176435|ref|XP_023233726.1| (transcription initiation factor TFIID subunit 12-like isoform X3 [Centruroides sculpturatus] >gi|1316176437|ref|XP_023233729.1| transcription initiation factor TFIID subunit 12-like isoform X4 [Centruroides sculpturatus] >gi|1316176439|ref|XP_023233730.1| transcription initiation factor TFIID subunit 12-like isoform X4 [Centruroides sculpturatus])

HSP 1 Score: 168.703 bits (426), Expect = 2.750e-50
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 0 
Query:    9 TSVPPSAEPPLTAVNGSDTGSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            TSV P+    +TA+  + TG    +++    S   QVL++QRL++LV+EVD  EQLDD+VE+LLL IADDFIE  VT SC LA+HRK+ ++EV+DVQL LE+NWNM+IPGFGSE++R +KRS   EAHK RMALIRK++KKY
Sbjct:   68 TSVNPAN---MTAIVKAVTGGTERLSTI---SDGTQVLNRQRLQDLVREVDPNEQLDDDVEELLLQIADDFIENVVTTSCLLAKHRKSNTLEVKDVQLSLEKNWNMWIPGFGSEELRPYKRSCTTEAHKQRMALIRKSLKKY 203
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|677159655|gb|KFP43820.1| (Transcription initiation factor TFIID subunit 12 [Chlamydotis macqueenii])

HSP 1 Score: 164.851 bits (416), Expect = 2.273e-49
Identity = 81/152 (53.29%), Postives = 112/152 (73.68%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGS---GSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S  + P++ PP +++  S T +   G+  A    S ++ QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSNFSSIKLEPASTPPQSSMANSTTVAKMPGTPSAGGRLSPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|1126170604|ref|XP_019617306.1| (PREDICTED: transcription initiation factor TFIID subunit 12-like [Branchiostoma belcheri])

HSP 1 Score: 166.777 bits (421), Expect = 3.117e-49
Identity = 74/122 (60.66%), Postives = 100/122 (81.97%), Query Frame = 0 
Query:   28 GSGSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            GSG + ++   S + +QVL K+RL++LV+E+D  EQLDD+VE+LLL +ADDFIE  VT+SC LA+HRK+ ++E +DVQ+ LERNWNMYIPGFG++DIR +K++   EAHK RMALIRKT+KK
Sbjct:   99 GSGQNHSAGRISPEGSQVLSKRRLQDLVREIDPTEQLDDDVEELLLQVADDFIENVVTSSCQLAKHRKSNTLETKDVQMYLERNWNMYIPGFGTDDIRPYKKACTTEAHKQRMALIRKTLKK 220
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|527248350|ref|XP_005142495.1| (PREDICTED: transcription initiation factor TFIID subunit 12 [Melopsittacus undulatus])

HSP 1 Score: 164.466 bits (415), Expect = 3.260e-49
Identity = 81/152 (53.29%), Postives = 111/152 (73.03%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGS---GSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +G  S    P++ PP +++  S T +   G+       S ++ QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSGFSSIKPEPASTPPQSSMANSTTVAKMPGTPSGGGRLSPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|755867368|ref|XP_011291397.1| (PREDICTED: transcription initiation factor TFIID subunit 12 isoform X2 [Musca domestica])

HSP 1 Score: 163.696 bits (413), Expect = 7.038e-49
Identity = 81/153 (52.94%), Postives = 110/153 (71.90%), Query Frame = 0 
Query:    2 NAAGVMSTSVPPSAEPPLTAVNGSDTGSGSH-VASHAPSSQTAQ---VLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKKY 150
            N+AGV+  +            N + TGSGS+   S+A +S  A+   +L K RL ELV+EVD   QLD++VE+LLL IADDF+E AV A+C+ A+HRK   +EVRDVQL LER WNM+IPGFG++++R +KR+++ EAHK R+ALIRKT+KKY
Sbjct:   17 NSAGVIGQTA-----------NNASTGSGSNATTSNAKASTGAENQPILTKPRLMELVREVDTTAQLDEDVEELLLQIADDFVEDAVKATCAFAKHRKVSKVEVRDVQLHLERKWNMWIPGFGTDELRPYKRAAITEAHKQRLALIRKTIKKY 158
[Close]
BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|1341038406|ref|XP_023796837.1| (transcription initiation factor TFIID subunit 12 [Cyanistes caeruleus] >gi|1341038408|ref|XP_023796838.1| transcription initiation factor TFIID subunit 12 [Cyanistes caeruleus])

HSP 1 Score: 163.696 bits (413), Expect = 8.252e-49
Identity = 80/152 (52.63%), Postives = 110/152 (72.37%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGS---GSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S    P++ PP +++  S T +   G+       S ++ QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSNFSSIKPEPASTPPQSSMANSTTMAKMPGTPCGGGRLSPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
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BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Match: gi|543373366|ref|XP_005529902.1| (PREDICTED: transcription initiation factor TFIID subunit 12 [Pseudopodoces humilis] >gi|929491009|ref|XP_014114056.1| PREDICTED: transcription initiation factor TFIID subunit 12 [Pseudopodoces humilis] >gi|929491014|ref|XP_014114057.1| PREDICTED: transcription initiation factor TFIID subunit 12 [Pseudopodoces humilis] >gi|998733198|ref|XP_015504820.1| PREDICTED: transcription initiation factor TFIID subunit 12 [Parus major])

HSP 1 Score: 163.31 bits (412), Expect = 1.278e-48
Identity = 80/152 (52.63%), Postives = 110/152 (72.37%), Query Frame = 0 
Query:    1 LNAAGVMSTSVPPSAEPPLTAVNGSDTGS---GSHVASHAPSSQTAQVLDKQRLRELVKEVDVYEQLDDEVEDLLLHIADDFIEQAVTASCSLARHRKAPSIEVRDVQLVLERNWNMYIPGFGSEDIRQHKRSSLNEAHKSRMALIRKTMKK 149
            +N +   S    P++ PP +++  S T +   G+       S ++ QVL K++L++LV+EVD  EQLD++VE++LL IADDFIE  VTA+C LARHRK+ ++EV+DVQL LER WNM+IPGFGSE+IR +K++   EAHK RMALIRKT KK
Sbjct:   10 INLSNFSSIKPEPASTPPQSSMANSTTVAKMPGTPCGGGRLSPESNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 161
The following BLAST results are available for this feature:
BLAST of transcription initiation factor tfiid subunit 12 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000024826.602e-5558.87supercontig:LSalAtl2s:LSalAtl2s1483:85786:88142:1 ... [more]
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BLAST of transcription initiation factor tfiid subunit 12 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
gi|47117262|sp|Q8VE65.1|TAF12_MOUSE3.250e-5051.59RecName: Full=Transcription initiation factor TFII... [more]
gi|3024708|sp|Q16514.1|TAF12_HUMAN1.729e-4952.63RecName: Full=Transcription initiation factor TFII... [more]
gi|119367383|sp|Q3T174.1|TAF12_BOVIN2.426e-4950.96RecName: Full=Transcription initiation factor TFII... [more]
gi|3024710|sp|Q91858.1|TAF12_XENLA7.952e-4763.06RecName: Full=Transcription initiation factor TFII... [more]
gi|1729812|sp|P49905.1|TAF12_DROME1.009e-4347.53RecName: Full=Transcription initiation factor TFII... [more]
gi|75249490|sp|Q940A7.1|TA12B_ARATH1.677e-2742.36RecName: Full=Transcription initiation factor TFII... [more]
gi|550540911|sp|B2C6R6.1|TAFCL_ARATH1.776e-2742.36RecName: Full=Transcription initiation factor TFII... [more]
gi|75266219|sp|Q9SR71.1|TAF12_ARATH3.867e-2642.72RecName: Full=Transcription initiation factor TFII... [more]
gi|239977647|sp|Q555L9.2|TAF12_DICDI2.538e-2540.95RecName: Full=Transcription initiation factor TFII... [more]
gi|42559733|sp|Q03761.1|TAF12_YEAST1.614e-2342.06RecName: Full=Transcription initiation factor TFII... [more]

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BLAST of transcription initiation factor tfiid subunit 12 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712458|gb|ACO12075.1|6.675e-5558.87Transcription initiation factor TFIID subunit 12 [... [more]
gi|957855078|ref|XP_014677164.1|6.173e-5255.70PREDICTED: transcription initiation factor TFIID s... [more]
gi|1316176425|ref|XP_023233721.1|2.700e-5058.45transcription initiation factor TFIID subunit 12-l... [more]
gi|1316176435|ref|XP_023233726.1|2.750e-5058.45transcription initiation factor TFIID subunit 12-l... [more]
gi|677159655|gb|KFP43820.1|2.273e-4953.29Transcription initiation factor TFIID subunit 12 [... [more]
gi|1126170604|ref|XP_019617306.1|3.117e-4960.66PREDICTED: transcription initiation factor TFIID s... [more]
gi|527248350|ref|XP_005142495.1|3.260e-4953.29PREDICTED: transcription initiation factor TFIID s... [more]
gi|755867368|ref|XP_011291397.1|7.038e-4952.94PREDICTED: transcription initiation factor TFIID s... [more]
gi|1341038406|ref|XP_023796837.1|8.252e-4952.63transcription initiation factor TFIID subunit 12 [... [more]
gi|543373366|ref|XP_005529902.1|1.278e-4852.63PREDICTED: transcription initiation factor TFIID s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold660_size117387supercontigscaffold660_size117387:55560..58409 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold660_size117387-snap-gene-0.27-mRNA-1maker-scaffold660_size117387-snap-gene-0.27-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold660_size117387:55560..58409+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold660_size117387-snap-gene-0.27 ID=maker-scaffold660_size117387-snap-gene-0.27|Name=transcription initiation factor tfiid subunit 12|organism=Tigriopus kingsejongensis|type=gene|length=2850bp|location=Sequence derived from alignment at scaffold660_size117387:55560..58409+ (Tigriopus kingsejongensis)
TTTTCCGACAGGGCTCGAAATGCCCTTACCTACACTCCAGACCCTTAACA
AACATCGACAGTCCGCCTGAACGCTGCCGGGGTCATGTCCACCTCGGTCC
CACCCTCAGCTGAGCCGCCCTTGACCGCCGTCAATGGTTCGGACACGGGC
AGTGGCTCGCACGTGGCCAGCCACGCCCCCAGCAGTCAGGTAAGCCGACC
CAGCCAGCCCGCAGGCGCCACCGAGCCAGGCTGAGGTCAGTGCCAGGCTG
ACTGCCCCGAGTCTGAGCCCCACCTTCACGCCCGGCAGTCGAGCCCATCG
AGCCTCGAACCCGGGACGACCAGTTGGGTCTAGCGGCTCATGGCTGAGCC
GGATGCCCGTCGACCCCGGGCGCTGCGGGCGCTGGGCCTCGTGACTCCTG
GAGGGCTGAGCTGGCGCGATTAGCACTGTCGGGTAGTGTGTGTAGTCGTG
TAATCCTACGTATAAGAAATCGGTGTATTGGCCCCAGAGTCAACACTCGG
CATACGAATACTAGTCAATAGTGTTAGGGCCATTTATAAATAAAGTATGC
ACATTCATAGAAAACAAAGATGCTGCGGACAACATGGCAGCCAACTATAC
AAAACGGAACAACTCAATAACGAGAACACAATAAATGTTTAAAAGCGAAA
CACCGGCTAAAGCTAAGTACCGGCGACTTGGATTAGCGTTGCGGCTAGGG
CATAGAGTACTAGACTATCTGGAGAGGAAGACTGCCCGACCCTGAGAAGA
TGCGTTCGTTTTTTTCACACAGTGAACAGTGAAACACAGTGAAAATCCCT
AAGAATAGCTCCAACTTTTGGGGCTCGTCCGACAAAAATTTGAAGGCGGT
CAGACCCCACCCAGAGTGGGCGGGAGCCACCCTGAGACCTGCCTGGCGAA
CTCTGGGCCGCTCAAGCGTACAAGGAATAGAATGAGCCGCCCTCAACCAC
CTGAGTGTCGTGATCATCTGCCCAGCATTGATCCAAGACAGCTTTAAAGC
CTTCATTCAGTGCTGGACCAGACTATAGGGTCAATCAGGCTAGTCCAAGG
CCCTGACATTGGCTTCAAAGTGACCCTTTTAGTGAGAGTGACCACTTGAA
CAATCAAAATCGTCCGTCTGATTCCTTGGGCCGACCACTGGCGAGCTTCA
AACCCAAGTGCTGAGGCCTTGAAAAGTTGGAGCTATTCTTAGGGATTTTC
ACTGTGTTGTGAAAAAACCGAACGCATCTTCTCAGGGTCGGGAAGTCTTC
CTCTCCAGATAGTCTAGTACTCTATGGCTAGGGTCACTCGAGCGGAATTG
ACTTCGATTAGCGGTGCGGCTAGCTTAGTTCGAGCGTAGGTCACCTAGAT
TAGCGCTGAGGCTAGGGTCACTCGAGCGTAATTGACACACTGTTAGGGTT
AGGTCGGGTCAGGTTAGGTCAGGTTGGATGTTAGAACTGTTTGGGCGCAC
GACCGCCAGCCCCTACTTTTACCCGGCTGGGTCTACATATACCCATGTGG
AACTCGCCGGCCCCAGCATCAATAGATCCGGGGTGGCCCCGGCTCTGGCC
TATGTACATATGGGCCTGATTCCCCTGTGCGATGCATAGCGGACCCGGTG
GACGCCCATGAATGGACCCATGCTCCTTGGCTATTGATCTGGACTGGGAT
TGAAGACGAGCCAGGCTAGCATGGGGGTTACGATGGCCGAGCATCGTGTT
GCCCTGGCGTGGAGTGGAGCGAGGCTGGGCTTGATCTGTCGTTGACCGAT
AACCATCAGGGTCCCCGATGAAGTGTCCCACCTAATCTGGCGTAGGCTGG
GCAGAGTGGGTAGCAGCCGTCGGGGTCGGAGGCCCGATTCCGATACGGCT
CTTGACTGGCTAAAGGGTGCCAGCCCATGATCGGCTCAGCCTCGCGTGTG
CCTCAATCTATTTTGAGCCTAGTCCTTCCATTTGTAGTCAGCCCGGGCGG
CTGACCATCACGTGGGGTCCACGCCACGATAGGTAGAGGGGCTCGAAAAT
TATGTTGGGTCGACCCCCGCGAGTATGCAAAGATTCATTGATATTGTGGC
GCGTGGGCTAACTTGGCTCCATCAGCTAAATTGTCCTGGCCCAAATCATG
GGTAGCGGAACCCATCCCACCCACCGGGCCCAGCTGGAACGGTGATTTAG
CCCGGATAACCATGGTGGCCGTCATTTTCTAGACCGCCCAAGTGCTGGAT
AAGCAACGACTGCGGGAGCTCGTGAAAGAAGTGGACGTCTATGAACAGTT
GGATGACGAAGTCGAAGATTTGCTCCTACACATCGCCGATGATTTCATCG
AGCAGGCCGTCACAGCGTCGTGTTCCTTGGCCCGACACCGGAAAGCGCCC
TCCATCGAGGTCAGAGATGTCCAGTTAGTTTTAGGTGAGTGTCTGAGGAG
GAGATCCACTCGAGTTAGGCATTAGAGTCCTAATGTCCTCCGAATTTCAG
AGCGGAACTGGAATATGTACATCCCGGGTTTCGGCTCCGAAGATATCCGT
CAGCACAAACGATCCTCGCTCAACGAGGCTCACAAATCGCGCATGGCCCT
CATCCGCAAGACCATGAAGAAGTACTAGGATTGTCTCCCCTCTACCCCGG
AATTTGATTTCAACCAGGGATCCCCAGATGAAAGGAGCGGGACAAATGAG
AAGCTTGCGGGGTCTCACACGGACGCGCCCCTTAAAAATCTAGCCCATCT
CAAGCCCGTTGACTCCTTCCCGGCTAGCTTGTCCCACGTTGAGAGGTCAC
CCCTGGAATCAAATTTGCCGCATTTTTCGTTCTCTCCATATCAGGGTGAC
GAGTTCATCAACTAGTTGAATGTGAAATATACACTAACCCCAAATACGTT
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Synonyms
The feature 'transcription initiation factor tfiid subunit 12' has the following synonyms
Synonym
Tk06670
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