SoxC, maker-scaffold74_size411160-snap-gene-2.4 (gene) Tigriopus kingsejongensis

Overview


Name	SoxC
Unique Name	maker-scaffold74_size411160-snap-gene-2.4
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000012988 (supercontig:LSalAtl2s:LSalAtl2s98:416526:433921:-1 gene:EMLSAG00000012988 transcript:EMLSAT00000012988 description:"augustus_masked-LSalAtl2s98-processed-gene-4.0")

HSP 1 Score: 187.963 bits (476), Expect = 5.114e-56
Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0

Query:   32 FRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSG 137
            F SMKV + SKTPYSDATQTKKHK NHIKRPMN FMVWSQLERRKIIEVTP+KHNAEISKELGRRWKLL Q+ R PY+ EAERLR+LH +E+PDYKYKP+K+  SG
Sbjct:   49 FGSMKVKSESKTPYSDATQTKKHKTNHIKRPMNAFMVWSQLERRKIIEVTPEKHNAEISKELGRRWKLLVQKDRQPYIDEAERLRVLHNQEYPDYKYKPRKRNNSG 154

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000011293 (supercontig:LSalAtl2s:LSalAtl2s776:116786:181454:1 gene:EMLSAG00000011293 transcript:EMLSAT00000011293 description:"maker-LSalAtl2s776-augustus-gene-1.7")

HSP 1 Score: 181.8 bits (460), Expect = 4.956e-54
Identity = 96/164 (58.54%), Postives = 115/164 (70.12%), Query Frame = 0

Query:   30 EVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSG------------GGEGCA---HGSLPSGLA---SRSVSDKS-KAIVKSKLVSAPHP 174
            EV+RS+++  +SKTPYSDATQTKKH++NHIKRPMN FMVWSQLERRKIIEVTPDKHNA+ISKELG+RWK L++  R PY++EAERLR+LH KE+PDYKYKP+KK  +G            GG G      G  P        R   +KS K + K K   APHP
Sbjct:   47 EVYRSLRINIDSKTPYSDATQTKKHRVNHIKRPMNAFMVWSQLERRKIIEVTPDKHNAQISKELGQRWKALNEVERHPYVEEAERLRLLHIKEYPDYKYKPRKKVLNGPNASTSSKDEIRGGGGIVKSKRGRKPKSYYIQLQREEEEKSIKGMYKEK---APHP 207

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000012986 (supercontig:LSalAtl2s:LSalAtl2s98:312691:316904:-1 gene:EMLSAG00000012986 transcript:EMLSAT00000012986 description:"maker-LSalAtl2s98-snap-gene-3.10")

HSP 1 Score: 172.94 bits (437), Expect = 1.283e-50
Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 0

Query:   29 SEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGG 139
            S +  SM++   SKTPYSDATQTKK   NHIKRPMN FMVWSQLERRKIIEVTP+KHNAEISKELGRRWK+L++E + PY+QEAERLR+LH KE+P+YKY+P+KK     G
Sbjct:   43 SVILPSMRISTESKTPYSDATQTKKQPPNHIKRPMNAFMVWSQLERRKIIEVTPEKHNAEISKELGRRWKMLNEEDQKPYIQEAERLRVLHLKEYPNYKYRPRKKSLKDSG 153

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000003454 (supercontig:LSalAtl2s:LSalAtl2s1897:25608:26602:1 gene:EMLSAG00000003454 transcript:EMLSAT00000003454 description:"maker-LSalAtl2s1897-snap-gene-0.3")

HSP 1 Score: 166.392 bits (420), Expect = 7.073e-50
Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            +F S  +  NS TPY+DATQTKK+  NHIKRPMN FMVWSQLERRKIIE+ PD HNAEISK LG++WKLLSQ+ R P++QEAERLR+LH +E+PDYKY+P+KK
Sbjct:   12 IFGSQTIDTNSSTPYTDATQTKKNPANHIKRPMNAFMVWSQLERRKIIEIQPDIHNAEISKNLGKKWKLLSQDEREPFIQEAERLRVLHMQEYPDYKYRPRKK 114

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000005555 (supercontig:LSalAtl2s:LSalAtl2s298:363976:367504:1 gene:EMLSAG00000005555 transcript:EMLSAT00000005555 description:"maker-LSalAtl2s298-snap-gene-3.3")

HSP 1 Score: 167.933 bits (424), Expect = 1.091e-47
Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = 0

Query:   48 ATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGG 139
             + TKKH++NHIKRPMN FMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLL +E R PY+ EAERLR+LHQ+E+PDYKYKP+KK K G G
Sbjct:   15 GSSTKKHRVNHIKRPMNAFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLGEEERQPYIDEAERLRVLHQREYPDYKYKPRKKVKGGCG 106

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000002070 (supercontig:LSalAtl2s:LSalAtl2s1384:4574:6843:1 gene:EMLSAG00000002070 transcript:EMLSAT00000002070 description:"maker-LSalAtl2s1384-snap-gene-0.5")

HSP 1 Score: 157.918 bits (398), Expect = 5.080e-46
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 0

Query:   32 FRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKP-KSGGGEGCAHG 145
            F S+ V  NS TPYSDATQTKKH  NHIKRPMN FMV+S +ER+KIIE  PD HNAE+SK LGRRWK LS++ + P++QEAERLR+LH +E+PDYKY+PKKK  KSG G G   G
Sbjct:   10 FPSLCVDINSPTPYSDATQTKKHPPNHIKRPMNAFMVFSHIERKKIIEFQPDIHNAEVSKALGRRWKELSKDEKEPFIQEAERLRLLHMREYPDYKYRPKKKTVKSGVGNGGESG 124

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000002096 (supercontig:LSalAtl2s:LSalAtl2s1393:27154:29042:1 gene:EMLSAG00000002096 transcript:EMLSAT00000002096 description:"maker-LSalAtl2s1393-augustus-gene-0.3")

HSP 1 Score: 149.828 bits (377), Expect = 8.533e-42
Identity = 70/116 (60.34%), Postives = 86/116 (74.14%), Query Frame = 0

Query:   23 SVPQSGSEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGG 138
            SV      VF S  V  NS TPY+DAT+TKK   N IKRPMN FMV+S +ER+KI+E  PD HNAEISK LG++WK L+ E ++PY+QEAERLR+LH KE+PDYKY+P+KK   G 
Sbjct:    4 SVMNPNGTVFGSQLVDKNSSTPYTDATKTKKQPQNRIKRPMNAFMVFSHIERKKIVEFQPDIHNAEISKNLGKKWKELTDEFKIPYIQEAERLRLLHLKEYPDYKYQPRKKACGGA 119

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000002555 (supercontig:LSalAtl2s:LSalAtl2s1508:39766:41005:-1 gene:EMLSAG00000002555 transcript:EMLSAT00000002555 description:"maker-LSalAtl2s1508-augustus-gene-0.2")

HSP 1 Score: 142.895 bits (359), Expect = 8.138e-39
Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQT--KKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            VF S+ V  NS TPY+DAT+   KKH  N IKRPMN FMVWSQ+ERRKIIE+ PD HNAEISK LG++WK LS + R P+++ AE+L+  H +E+PDYKY+P+KK
Sbjct:   36 VFGSLYVDTNSSTPYTDATKVRAKKHTANRIKRPMNAFMVWSQIERRKIIEIQPDIHNAEISKNLGKKWKSLSLQEREPFIRHAEKLKRYHMQEYPDYKYRPRKK 140

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000004394 (supercontig:LSalAtl2s:LSalAtl2s230:353480:354680:1 gene:EMLSAG00000004394 transcript:EMLSAT00000004394 description:"maker-LSalAtl2s230-augustus-gene-3.9")

HSP 1 Score: 109.383 bits (272), Expect = 6.764e-27
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 0

Query:   48 ATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKS 136
            A    K + +HIKRPMN FMVWS+L+RRKI +  P  HN+EISK LG  WKLL++  + P++ EA+R+R  H K+ P+YKY+P++KPK+
Sbjct:   46 AAMALKREDSHIKRPMNAFMVWSRLQRRKIAQENPKMHNSEISKRLGSEWKLLTETDKRPFIDEAKRIRAKHMKDHPEYKYRPRRKPKT 134

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BLAST of SoxC vs. L. salmonis genes
Match: EMLSAG00000004396 (supercontig:LSalAtl2s:LSalAtl2s230:491269:492547:1 gene:EMLSAG00000004396 transcript:EMLSAT00000004396 description:"maker-LSalAtl2s230-snap-gene-5.6")

HSP 1 Score: 102.449 bits (254), Expect = 2.488e-25
Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0

Query:   57 NHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            +HIKRPMN FMVWS+ +RRK+    P  HN+EISK LG  WK+L++  + P++ EA+RLR LH KE P+YKY+P++KPK
Sbjct:   31 SHIKRPMNAFMVWSRGQRRKMAAENPKMHNSEISKRLGAEWKVLTELDKRPFIDEAKRLRALHMKEHPEYKYRPRRKPK 109

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BLAST of SoxC vs. SwissProt
Match: gi|108935907|sp|P40656.3|SOX14_DROME (RecName: Full=Putative transcription factor SOX-14)

HSP 1 Score: 158.688 bits (400), Expect = 2.417e-41
Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            VF S +V  NS TPYSDAT+TKKH   HIKRPMN FMVWSQ+ERRKI E TPD HNAEISKELGRRW+LLS++ + PY+ EAE+LR LH  E+P+YKY+P+KK
Sbjct:  159 VFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKK 261

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BLAST of SoxC vs. SwissProt
Match: gi|341942057|sp|Q06831.2|SOX4_MOUSE (RecName: Full=Transcription factor SOX-4)

HSP 1 Score: 132.88 bits (333), Expect = 2.643e-33
Identity = 59/93 (63.44%), Postives = 73/93 (78.49%), Query Frame = 0

Query:   57 NHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSG-GGEGCAHGSLP 148
             HIKRPMN FMVWSQ+ERRKI+E +PD HNAEISK LG+RWKLL    ++P++QEAERLR+ H  ++PDYKY+P+KK KSG  G G A  + P
Sbjct:   57 GHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYKYRPRKKVKSGNAGAGSAATAKP 149

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BLAST of SoxC vs. SwissProt
Match: gi|226709487|sp|P40650.2|SX11B_XENLA (RecName: Full=Transcription factor Sox-11-B; AltName: Full=Transcription factor Sox-13; Short=xSox-13; AltName: Full=XLS13B)

HSP 1 Score: 128.257 bits (321), Expect = 5.079e-32
Identity = 51/78 (65.38%), Postives = 68/78 (87.18%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L+   ++P+++EAERLR+ H  ++PDYKY+P+KKPK
Sbjct:   44 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 121

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BLAST of SoxC vs. SwissProt
Match: gi|226709486|sp|Q91731.2|SX11A_XENLA (RecName: Full=Transcription factor Sox-11-A; Short=xSox-11; AltName: Full=XLS13A)

HSP 1 Score: 127.872 bits (320), Expect = 7.502e-32
Identity = 51/78 (65.38%), Postives = 68/78 (87.18%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L+   ++P+++EAERLR+ H  ++PDYKY+P+KKPK
Sbjct:   46 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 123

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BLAST of SoxC vs. SwissProt
Match: gi|548952|sp|Q06945.1|SOX4_HUMAN (RecName: Full=Transcription factor SOX-4)

HSP 1 Score: 129.028 bits (323), Expect = 9.972e-32
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 0

Query:   57 NHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSG 137
             HIKRPMN FMVWSQ+ERRKI+E +PD HNAEISK LG+RWKLL    ++P+++EAERLR+ H  ++PDYKY+P+KK KSG
Sbjct:   57 GHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSG 137

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BLAST of SoxC vs. SwissProt
Match: gi|81885896|sp|Q7M6Y2.1|SOX11_MOUSE (RecName: Full=Transcription factor SOX-11)

HSP 1 Score: 127.487 bits (319), Expect = 1.310e-31
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKS 136
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L    ++P+++EAERLR+ H  ++PDYKY+P+KKPK+
Sbjct:   48 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126

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BLAST of SoxC vs. SwissProt
Match: gi|82181392|sp|Q66JF1.1|SOX11_XENTR (RecName: Full=Transcription factor Sox-11)

HSP 1 Score: 127.102 bits (318), Expect = 1.313e-31
Identity = 51/78 (65.38%), Postives = 68/78 (87.18%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L+   ++P+++EAERLR+ H  ++PDYKY+P+KKPK
Sbjct:   47 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 124

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BLAST of SoxC vs. SwissProt
Match: gi|109894872|sp|P0C1G9.1|SOX11_RAT (RecName: Full=Transcription factor SOX-11)

HSP 1 Score: 127.487 bits (319), Expect = 1.323e-31
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKS 136
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L    ++P+++EAERLR+ H  ++PDYKY+P+KKPK+
Sbjct:   48 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126

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BLAST of SoxC vs. SwissProt
Match: gi|1351142|sp|P35716.2|SOX11_HUMAN (RecName: Full=Transcription factor SOX-11)

HSP 1 Score: 127.102 bits (318), Expect = 3.930e-31
Identity = 51/78 (65.38%), Postives = 67/78 (85.90%), Query Frame = 0

Query:   58 HIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L    ++P+++EAERLR+ H  ++PDYKY+P+KKPK
Sbjct:   48 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 125

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BLAST of SoxC vs. SwissProt
Match: gi|1351141|sp|P48435.1|SOX11_CHICK (RecName: Full=Transcription factor SOX-11; Short=cSox11)

HSP 1 Score: 125.946 bits (315), Expect = 4.253e-31
Identity = 51/79 (64.56%), Postives = 67/79 (84.81%), Query Frame = 0

Query:   57 NHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
             HIKRPMN FMVWS++ERRKI+E +PD HNAEISK LG+RWK+L    ++P+++EAERLR+ H  ++PDYKY+P+KKPK
Sbjct:   47 GHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPK 125

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BLAST of SoxC vs. nr
Match: gi|414073170|gb|AFW97643.1| (SoxC [Macrobrachium nipponense])

HSP 1 Score: 177.948 bits (450), Expect = 1.200e-47
Identity = 81/138 (58.70%), Postives = 104/138 (75.36%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGGEGCAHGSLPSGLASRSVSDKSKAIVKSKL 168
            +F S  V  NS+TPYSDATQTKKH LNH+KRPMN FMVWSQ+ERR+I++  PD HNAEISK+LG+RWK L+++ R PY+QEAERLR+LH +E+PDYKY+P+KK KSG G      +L  G  S++   K+  I  + L
Sbjct:   14 IFGSQLVQANSRTPYSDATQTKKHNLNHVKRPMNAFMVWSQMERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLHMQEYPDYKYRPRKKTKSGNGN---IKTLEKGRVSKAKDIKTNTIATNAL 148

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BLAST of SoxC vs. nr
Match: gi|1069791806|ref|XP_018321023.1| (PREDICTED: putative transcription factor SOX-14 isoform X1 [Agrilus planipennis])

HSP 1 Score: 171.4 bits (433), Expect = 4.492e-46
Identity = 76/107 (71.03%), Postives = 91/107 (85.05%), Query Frame = 0

Query:   27 SGSEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            SG  +F S  +  NS TPYSDATQTKK+  NHIKRPMN FMVWSQ+ER+KI E+ PD HNAEISK LGRRWKLLS++ RLP+++EAERLR+LHQKE+PDYKY+P+KK
Sbjct:   17 SGLPIFGSQLIDQNSATPYSDATQTKKNNPNHIKRPMNAFMVWSQIERKKICEMQPDMHNAEISKRLGRRWKLLSEKDRLPFIEEAERLRLLHQKEYPDYKYRPRKK 123

[Close]

BLAST of SoxC vs. nr
Match: gi|222160395|gb|ACM47362.1| (Sox14 protein [Scylla paramamosain])

HSP 1 Score: 174.096 bits (440), Expect = 4.599e-46
Identity = 74/117 (63.25%), Postives = 94/117 (80.34%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGGEGCAHGSL 147
            +F S  V  NS+TPYSDATQTKKH  NH+KRPMN FMVWSQ+ERR+I++  PD HNAEISK+LG+RWK L+++ R PY+QEAERLR+LH +E+PDYKY+P+KK KSG  +    G +
Sbjct:   20 IFGSQLVQANSRTPYSDATQTKKHNPNHVKRPMNAFMVWSQMERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLHMQEYPDYKYRPRKKTKSGNSKSVEKGRV 136

[Close]

BLAST of SoxC vs. nr
Match: gi|1279727160|ref|XP_022908230.1| (putative transcription factor SOX-14 [Onthophagus taurus])

HSP 1 Score: 170.629 bits (431), Expect = 5.776e-46
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK-----PKSGG 138
            +F S  V  NS TPYSDATQTKK+  NHIKRPMN FMVWSQ+ERRKI EV PD HNAEISK LG+RWKLL+ E RLP++QEA+RLR LHQ+E+PDYKY+P+KK      KSGG
Sbjct:   32 IFGSQLVDQNSATPYSDATQTKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLGKRWKLLTDEERLPFIQEADRLRQLHQREYPDYKYRPRKKTTKPASKSGG 144

[Close]

BLAST of SoxC vs. nr
Match: gi|540849981|gb|AGV15463.1| (SOX14A [Eriocheir sinensis])

HSP 1 Score: 171.785 bits (434), Expect = 3.116e-45
Identity = 80/142 (56.34%), Postives = 101/142 (71.13%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGGEGCAHGSLPSGLASRSVSDKSKAIVKSKLVSAP 172
            +F S  V  NS+TPYSDATQT KH  NH+KRPMN FMVWSQ+ERR+I++  PD HNAEISK+LG+RWK L+++ R PY+QEAERLR+LH +E+PDYKY+P+KK KSG  +    G +    A    S    AI   KL + P
Sbjct:   20 IFGSQLVQANSRTPYSDATQTTKHNPNHVKRPMNAFMVWSQMERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLHMQEYPDYKYRPRKKTKSGNSKSVEKGRV--SKAKDKTSTSINAIKGVKLTADP 159

[Close]

BLAST of SoxC vs. nr
Match: gi|1080055239|ref|XP_018569300.1| (transcription factor Sox-11-A-like [Anoplophora glabripennis])

HSP 1 Score: 167.933 bits (424), Expect = 7.009e-45
Identity = 76/103 (73.79%), Postives = 88/103 (85.44%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            +F S  V  NS TPYSDATQTKK+  NHIKRPMN FMVWSQ+ERRKI EV+PD HNAEISK+LGRRWKLL+ E R P+++EAERLR LHQKE+PDYKY+P+KK
Sbjct:   23 LFGSQLVDKNSSTPYSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEVSPDMHNAEISKKLGRRWKLLNDEERQPFIEEAERLRQLHQKEYPDYKYRPRKK 125

[Close]

BLAST of SoxC vs. nr
Match: gi|1316207481|ref|XP_023214151.1| (transcription factor sem-2-like [Centruroides sculpturatus])

HSP 1 Score: 166.392 bits (420), Expect = 1.138e-44
Identity = 76/109 (69.72%), Postives = 91/109 (83.49%), Query Frame = 0

Query:   27 SGSEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            S  +VF S+KV +NS+TPY+DATQ KK   NHIKRPMN FMVWSQ+ERRKI E  PD HNAEISK LGRRWKLLS++ R P+++EAERLRILH +++PDYKY+PKKK K
Sbjct:   40 SEEQVFGSLKVDSNSRTPYTDATQCKK-VTNHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGRRWKLLSEDERQPFIEEAERLRILHMQQYPDYKYRPKKKAK 147

[Close]

BLAST of SoxC vs. nr
Match: gi|1285003159|ref|XP_023013371.1| (transcription factor Sox-12-like [Leptinotarsa decemlineata])

HSP 1 Score: 166.777 bits (421), Expect = 1.829e-44
Identity = 75/103 (72.82%), Postives = 88/103 (85.44%), Query Frame = 0

Query:   31 VFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            +F S  V  NS TPYSDATQTKK+  NHIKRPMN FMVWSQ+ERRKI EV+PD HNAEISK+LG+RWKLL+ E R P+++EAERLR LHQKE+PDYKY+P+KK
Sbjct:   15 LFGSQLVDKNSSTPYSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEVSPDMHNAEISKKLGKRWKLLNDEQRQPFIEEAERLRQLHQKEYPDYKYRPRKK 117

[Close]

BLAST of SoxC vs. nr
Match: gi|1316132493|ref|XP_023215904.1| (transcription factor Sox-11-like [Centruroides sculpturatus])

HSP 1 Score: 167.548 bits (423), Expect = 2.351e-44
Identity = 76/109 (69.72%), Postives = 91/109 (83.49%), Query Frame = 0

Query:   27 SGSEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPK 135
            S  +VF S+KV +NS+TPY+DATQ KK   NHIKRPMN FMVWSQ+ERRKI E  PD HNAEISK LGRRWKLLS++ R P+++EAERLRILH +++PDYKY+PKKK K
Sbjct:   40 SEEQVFGSLKVDSNSRTPYTDATQCKK-VTNHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGRRWKLLSEDERQPFIEEAERLRILHMQQYPDYKYRPKKKAK 147

[Close]

BLAST of SoxC vs. nr
Match: gi|1130223604|ref|XP_019758132.1| (PREDICTED: putative transcription factor SOX-14 [Dendroctonus ponderosae])

HSP 1 Score: 166.392 bits (420), Expect = 3.152e-44
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 0

Query:   28 GSEVFRSMKVGNNSKTPYSDATQTKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLSQEARLPYLQEAERLRILHQKEFPDYKYKPKKK 133
            G  +F S  V  NS TPYSDATQTKK+  NHIKRPMN FMVWSQ+ERRKI EV+PD HNAEISK LG+RWKLL+ E R P+++EAERLR LHQKE+PDYKY+P+KK
Sbjct:   19 GLPLFGSQLVDKNSSTPYSDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEVSPDMHNAEISKNLGKRWKLLNDEERQPFIEEAERLRQLHQKEYPDYKYRPRKK 124

The following BLAST results are available for this feature:

BLAST of SoxC vs. L. salmonis genes
BLAST of SoxC vs. SwissProt
BLAST of SoxC vs. nr

BLAST of SoxC vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 19


Match Name	E-value	Identity	Description
EMLSAG00000012988	5.114e-56	80.19	supercontig:LSalAtl2s:LSalAtl2s98:416526:433921:-1...	[more]
EMLSAG00000011293	4.956e-54	58.54	supercontig:LSalAtl2s:LSalAtl2s776:116786:181454:1...	[more]
EMLSAG00000012986	1.283e-50	71.17	supercontig:LSalAtl2s:LSalAtl2s98:312691:316904:-1...	[more]
EMLSAG00000003454	7.073e-50	70.87	supercontig:LSalAtl2s:LSalAtl2s1897:25608:26602:1 ...	[more]
EMLSAG00000005555	1.091e-47	79.35	supercontig:LSalAtl2s:LSalAtl2s298:363976:367504:1...	[more]
EMLSAG00000002070	5.080e-46	66.96	supercontig:LSalAtl2s:LSalAtl2s1384:4574:6843:1 ge...	[more]
EMLSAG00000002096	8.533e-42	60.34	supercontig:LSalAtl2s:LSalAtl2s1393:27154:29042:1 ...	[more]
EMLSAG00000002555	8.138e-39	61.90	supercontig:LSalAtl2s:LSalAtl2s1508:39766:41005:-1...	[more]
EMLSAG00000004394	6.764e-27	52.81	supercontig:LSalAtl2s:LSalAtl2s230:353480:354680:1...	[more]
EMLSAG00000004396	2.488e-25	56.96	supercontig:LSalAtl2s:LSalAtl2s230:491269:492547:1...	[more]

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BLAST of SoxC vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|108935907\|sp\|P40656.3\|SOX14_DROME	2.417e-41	69.90	RecName: Full=Putative transcription factor SOX-14	[more]
gi\|341942057\|sp\|Q06831.2\|SOX4_MOUSE	2.643e-33	63.44	RecName: Full=Transcription factor SOX-4	[more]
gi\|226709487\|sp\|P40650.2\|SX11B_XENLA	5.079e-32	65.38	RecName: Full=Transcription factor Sox-11-B; AltNa...	[more]
gi\|226709486\|sp\|Q91731.2\|SX11A_XENLA	7.502e-32	65.38	RecName: Full=Transcription factor Sox-11-A; Short...	[more]
gi\|548952\|sp\|Q06945.1\|SOX4_HUMAN	9.972e-32	66.67	RecName: Full=Transcription factor SOX-4	[more]
gi\|81885896\|sp\|Q7M6Y2.1\|SOX11_MOUSE	1.310e-31	64.56	RecName: Full=Transcription factor SOX-11	[more]
gi\|82181392\|sp\|Q66JF1.1\|SOX11_XENTR	1.313e-31	65.38	RecName: Full=Transcription factor Sox-11	[more]
gi\|109894872\|sp\|P0C1G9.1\|SOX11_RAT	1.323e-31	64.56	RecName: Full=Transcription factor SOX-11	[more]
gi\|1351142\|sp\|P35716.2\|SOX11_HUMAN	3.930e-31	65.38	RecName: Full=Transcription factor SOX-11	[more]
gi\|1351141\|sp\|P48435.1\|SOX11_CHICK	4.253e-31	64.56	RecName: Full=Transcription factor SOX-11; Short=c...	[more]

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BLAST of SoxC vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|414073170\|gb\|AFW97643.1\|	1.200e-47	58.70	SoxC [Macrobrachium nipponense]	[more]
gi\|1069791806\|ref\|XP_018321023.1\|	4.492e-46	71.03	PREDICTED: putative transcription factor SOX-14 is...	[more]
gi\|222160395\|gb\|ACM47362.1\|	4.599e-46	63.25	Sox14 protein [Scylla paramamosain]	[more]
gi\|1279727160\|ref\|XP_022908230.1\|	5.776e-46	69.91	putative transcription factor SOX-14 [Onthophagus ...	[more]
gi\|540849981\|gb\|AGV15463.1\|	3.116e-45	56.34	SOX14A [Eriocheir sinensis]	[more]
gi\|1080055239\|ref\|XP_018569300.1\|	7.009e-45	73.79	transcription factor Sox-11-A-like [Anoplophora gl...	[more]
gi\|1316207481\|ref\|XP_023214151.1\|	1.138e-44	69.72	transcription factor sem-2-like [Centruroides scul...	[more]
gi\|1285003159\|ref\|XP_023013371.1\|	1.829e-44	72.82	transcription factor Sox-12-like [Leptinotarsa dec...	[more]
gi\|1316132493\|ref\|XP_023215904.1\|	2.351e-44	69.72	transcription factor Sox-11-like [Centruroides scu...	[more]
gi\|1130223604\|ref\|XP_019758132.1\|	3.152e-44	71.70	PREDICTED: putative transcription factor SOX-14 [D...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold74_size411160	supercontig	scaffold74_size411160:223380..225922 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold74_size411160-snap-gene-2.4-mRNA-1	maker-scaffold74_size411160-snap-gene-2.4-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold74_size411160:223380..225922-

gene from alignment at scaffold74_size411160:223380..225922-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold74_size411160-snap-gene-2.4 ID=maker-scaffold74_size411160-snap-gene-2.4|Name=SoxC|organism=Tigriopus kingsejongensis|type=gene|length=2543bp|location=Sequence derived from alignment at scaffold74_size411160:223380..225922- (Tigriopus kingsejongensis)
TTGAGTCAGAGTTCGAAGGCTCGAACCGAGTTCTCTTCAGTTCCATGGCG
ATGTTCGTCCAAGATGTGTCTGTTCGAGGCATCTTCCAGAGCCTCTCCTA
GTCTGAAATTGTTGGACTTGTCCTCCACTGACGTTTGAACAGACAGAGAG
CGACACGGACTCGAACTCCTAGAGTAGAGGGGTCATCTCTTGGAACACAA
GTTGATTGCTCGGGGTTCGTGATACCCCTTATGAACACCAAGTGCAGTGA
TGACTAGTGCACTCATCGGCCAAGTGGTCATGGCCAACGGCTTCTCCTTG
ATGACCGTGGAACACAGTGTGCCCCAATCGGGTTCCGAGGTGTTCCGCTC
CATGAAAGTGGGCAACAATTCCAAGACCCCATATTCAGACGCCACCCAGG
TGAGTGCAGAACCAAGTCCCACCTCGATTTTGCACGACGTCTCTCTGTCT
GTAGGCCTCTTCTCGCTCCATTCAGGCTAGTCGCCTCCGCTTGGAGGAAC
TGTCAGATTCTCTGTAACCGCGTAGAGCCGCGATCAGCTGATCGGAGTCA
AGCTCAGTTGTTGCCAAGCCGGACGAAGTGTTCGGGCTGTGGCAGAAAGT
AGTGGAGGGGCTTAGCGATGGATAGAAGTACACATTGAATGAGTCTTTTG
GGGAGAAACAATGTGGAGAAAAAGGAGATGAAAGAGAAATATTGAGCACG
ACTGCTGCTTCGTCTTCTTTTTTTTCCGAGTGTGTGAGGGGAAGTAAGGA
GAGTGGAAGCCGGAGCATGAGGAGTGGAAAATTATTTGCACATTTGGTGC
TTCTCTCACTCATGTTTACCCAGTTGATCGGGGCTGCCTACTCAAATGAG
GCCATTTATCGACTGGCCCGTGACGAGTGGTCCGAGTGATCATTCCGCCA
CCAGGGTTGTGATCGGGGTTGGTTCGTCGATCGAGGGGAGAGCCGATTTG
AGTAATTATGGAGAGACCCACAAGAGACAACTTCCCTCTGGCGACGTTTA
ATTAGTCCATTAATCTTGCTTTTGTTTTCAGACCAAGAAACACAAGCTGA
ACCACATCAAACGGCCCATGAACCCCTTCATGGTCTGGTCGCAGTTGGAG
CGAAGAAAGATCATCGAAGTCACTCCCGACAAGCACAATGCCGAGATTTC
CAAAGAACTTGGACGCAGGTGGAAGCTCCTGTCCCAAGAGGCTCGACTGC
CCTACCTCCAGGAGGCTGAGCGCTTGCGGATCCTCCACCAGAAGGAGTTT
CCCGACTACAAGTATAAACCCAAGAAGAAGCCCAAGTCCGGGGGCGGGGA
GGGATGTGCTCATGGATCGTTGCCGTCGGGTCTCGCCTCACGCTCAGTCA
GTGATAAGTCCAAAGCAATAGTGAAGTCAAAGTTGGTGAGCGCACCCCAC
CCGGGCTGTGGCAAGATCCACACCCACAACACGCGGATGAAGAACTCGGC
CTTCTCCGCTCAATCGGCTAGTGAGCTGAAGCGTCTCAAGCTCAAGATTG
CCGAGGCCGACGAGGGTCATCCCCTCATTGGTGGGCGACACTTCGTTCCC
AGAGCCGAGACCACGAAAGAGAATATGAGACTGGATGGCTTTTACCCGCG
CCCATTGCCACAGCCGGTCCCGGGGACCACCAACATATCCATTCCAGTGA
CCGTGCTGGAATTCGCAGATCAAAATGCCCGCAGCCACTGCATCCGCTCA
GCCATTCCTCTGCCTCAGCTCCCCCTCTCACCCACTCAGAGCCAACAGAG
CTTGCCCGAGTTCCTGGCTGCCCCCCAGAAGCTCCCCATCCACATCGCGC
CCAAGCCCCCGAGTCCAGCAACTGTCCCTGTCCTGCCACCCTCGCCCAGC
TCGTCTCTGGATGACATCGACCTCGACACCAATGAACCAACCTCAACTGT
GAGTGCTCCCATGGCCAGCATCCTGCCCGACAGCTCGGCTGTGGAGCGGG
CTGTGGCGCGAGTCAGCCAGCCGCCCCAGCACCACAACAATGGCGCCTCT
GGAGCAGACCAAATGGACACCTCCACCAGCTCTCCAGCTGGTGGGGTGGC
CATGGACTCAGGACCAGTCTCGCCAGTGAGCAGCTCAACTGATTACTTCT
CCCCTCCTGCGGGGGTAGTTGAGAATGACGTTGACCTTTTGACCACGTCG
AGTGAAACGAGCAACTCGGTCGCAGTGACGACCACGACAAACCCTTCTAC
ATGTGTCATCGAGACGAAAGAGACGCCCATTAAGACTGAGAGGTCCGATG
TCCTCGACTACGATCTGGATGAAAAGCCGGACTTGGCGTCGAGTATCGGC
ATTTTCACCCTGGGCAACTCGCCCTCCGACTTTGAGAGCCTCAACGACCT
GCTCCATATTCCTGGCGAGCTCAAGATGGAACTCGAAAGTTTCGACTCCA
CCCTGGACCCGTGGCGAAGTGGCAGTTGTGGCAGTCCGGGTGGATCCCAC
TTTGAGTTTTCTTGCACCGACTTCCTGAACCTAGGTCAGACCACCACCAC
CACCAAGACTGATAGTGGCAATGACTATATGATCAAAATGTGA

Synonyms

The feature 'SoxC' has the following synonyms


Synonym
Tk04222

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