rna binding protein fox-1 homolog 3 isoform x2, maker-scaffold75_size407189-snap-gene-0.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000011970 (supercontig:LSalAtl2s:LSalAtl2s84:694:4599:-1 gene:EMLSAG00000011970 transcript:EMLSAT00000011970 description:"augustus_masked-LSalAtl2s84-processed-gene-3.0") HSP 1 Score: 92.0485 bits (227), Expect = 6.171e-22 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0 Query: 119 GFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPS----SIPN 167 GFGFVTFAN SDADRAREQLH++VVEGRKIEVNNATARVQTKKP+ SIPN Sbjct: 212 GFGFVTFANCSDADRAREQLHASVVEGRKIEVNNATARVQTKKPAPGAPSIPN 264
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000006512 (supercontig:LSalAtl2s:LSalAtl2s3572:870:5607:-1 gene:EMLSAG00000006512 transcript:EMLSAT00000006512 description:"maker-LSalAtl2s3572-snap-gene-0.3") HSP 1 Score: 89.3521 bits (220), Expect = 3.035e-21 Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = 0 Query: 205 PALYNPYDPFLANSLAQLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGF-------AGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYG 317 P +Y+ YDPF+AN LAQ+QANGL DPRLQNLAA +GL VRQGF AG+S AA+LSLQAA+ NQ+A+A G LARDPT AAL DPYL QSIGP+PGYG Sbjct: 112 PGVYS-YDPFMANPLAQVQANGLAAAVDPRLQNLAA---NGL----SAAVRQGFPTXATLPAGIS--AASLSLQAAVANQAAYANTIPG-----LARDPTTAALTDPYLTQSIGPMPGYG 216
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000007863 (supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1 gene:EMLSAG00000007863 transcript:EMLSAT00000007863 description:"maker-LSalAtl2s460-augustus-gene-1.7") HSP 1 Score: 58.9214 bits (141), Expect = 6.530e-10 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 0 Query: 53 DSNNPALSPNSGGQVQGSQPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTK 160 DSNN S +G + S PS +S+P +L V + ++ LR FG+FG++ D S+GFGF+TF+ DR + T ++G+KI+ +AT + ++K Sbjct: 26 DSNNVEYSSQTGSSGR-STPSSDSSPGKLFVGGLSWQTTPDKLREYFGQFGSVTDR--------SRGFGFITFSTPDAVDRVLAVVTHT-LDGKKIDPKHATPKSKSK 123
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000006441 (supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1 gene:EMLSAG00000006441 transcript:EMLSAT00000006441 description:"maker-LSalAtl2s351-snap-gene-6.33") HSP 1 Score: 57.3806 bits (137), Expect = 1.744e-9 Identity = 25/91 (27.47%), Postives = 54/91 (59.34%), Query Frame = 0 Query: 71 QPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNE--RGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQT 159 +P K + ++ + +P + DLRN F ++G + +V I++++ + S+GFGF++F++ +RA + H ++ +++E+ A R QT Sbjct: 123 KPKKTNYFPKVFLGGLPSNLTETDLRNFFSRYGEVCEVIIMYDQEKKKSRGFGFLSFSDDQAVNRACAE-HFVNIQNKQVEIKRAEPRTQT 212
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003333 (supercontig:LSalAtl2s:LSalAtl2s182:509525:511178:-1 gene:EMLSAG00000003333 transcript:EMLSAT00000003333 description:"maker-LSalAtl2s182-augustus-gene-5.31") HSP 1 Score: 56.9954 bits (136), Expect = 2.292e-9 Identity = 30/97 (30.93%), Postives = 52/97 (53.61%), Query Frame = 0 Query: 62 NSGGQVQGSQPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERG--SKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATAR 156 N G S E P +L++ ++ F + LR +F FG I+ ++++ + SKG+GF+T+A + DA +A EQ++ + GR I+V R Sbjct: 219 NRVGNYNESAGKPERGPMKLYIGSLHFDITEEMLRGIFEPFGKIMSIQLMMDTDTGRSKGYGFLTYAEAEDAKKALEQMNGFELAGRPIKVGTVNER 315
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000008938 (supercontig:LSalAtl2s:LSalAtl2s556:241652:266229:-1 gene:EMLSAG00000008938 transcript:EMLSAT00000008938 description:"maker-LSalAtl2s556-snap-gene-2.16") HSP 1 Score: 55.0694 bits (131), Expect = 7.327e-9 Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 74 KESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNER--GSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVN 151 K++T +L V +P+ D LR F FG I + +I + S+G+GFV N DA+RA ++ + +++GRK VN Sbjct: 47 KDTTHTKLFVGGLPYHTTDKSLREHFEVFGEIEEAVVITDRTTGKSRGYGFVIMQNKDDAERACKE-PNPIIDGRKXNVN 125
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Match: EMLSAG00000008559 (supercontig:LSalAtl2s:LSalAtl2s527:273623:274748:-1 gene:EMLSAG00000008559 transcript:EMLSAT00000008559 description:"augustus_masked-LSalAtl2s527-processed-gene-1.22") HSP 1 Score: 50.0618 bits (118), Expect = 3.123e-7 Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 0 Query: 94 DLRNMFGKFGTILDVEIIFN-ERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVN 151 DL F +FG + + I+ + ER S+GFGF+ F DA +AR L T ++G+KI V+ Sbjct: 245 DLNREFSRFGALESIRIVRDPERRSRGFGFIDFKYVEDAKQARRALCDTYLDGKKIRVD 303
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166918879|sp|A6QPR6.2|RFOX2_BOVIN (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9) HSP 1 Score: 179.104 bits (453), Expect = 6.540e-52 Identity = 95/171 (55.56%), Postives = 107/171 (62.57%), Query Frame = 0 Query: 20 PQAVAVAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPA-----LSPNSGGQVQGSQP--------SKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 P V Q Q + L + Q SN+P+ L+ G Q G Q +STPKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K P NG + P++ Sbjct: 57 PTEYGVPHTQDYAGQTSEHNLTLYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVV 227
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|29840825|sp|O43251.3|RFOX2_HUMAN (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=Hexaribonucleotide-binding protein 2; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9; AltName: Full=Repressor of tamoxifen transcriptional activity) HSP 1 Score: 178.333 bits (451), Expect = 1.186e-51 Identity = 95/171 (55.56%), Postives = 107/171 (62.57%), Query Frame = 0 Query: 20 PQAVAVAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPA-----LSPNSGGQVQGSQP--------SKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 P V Q Q + L + Q SN+P+ L+ G Q G Q +STPKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K P NG + P++ Sbjct: 49 PTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNGSLTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVV 219
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166918685|sp|A1A5R1.1|RFOX2_RAT (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9) HSP 1 Score: 178.333 bits (451), Expect = 2.971e-51 Identity = 97/172 (56.40%), Postives = 112/172 (65.12%), Query Frame = 0 Query: 20 PQAVAVAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPA-----LSPNSGG--------QVQGSQPSK-ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 P V Q Q + L ++Q SN+P+ L+ GG Q Q S+ S+ +STPKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K P NG + P++ Sbjct: 90 PTEYGVPHTQDYAGQTSEHNLTLYGSSQPHGEQSSNSPSNQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVV 261
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166918880|sp|Q8BP71.2|RFOX2_MOUSE (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=Fox-1 homolog Fxh; AltName: Full=Hexaribonucleotide-binding protein 2; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9) HSP 1 Score: 177.948 bits (450), Expect = 6.168e-51 Identity = 97/172 (56.40%), Postives = 111/172 (64.53%), Query Frame = 0 Query: 20 PQAVAVAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPA-----LSPNSGG--------QVQGSQPSK-ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 P V Q Q + L + Q SN+P+ L+ GG Q Q S+ S+ +STPKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K P NG + P++ Sbjct: 107 PTEYGVPHTQDYAGQTSEHNLTLYGSTQPHGEQSSNSPSNQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVV 278
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|82234470|sp|Q66JB7.1|RFOX2_XENTR (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9) HSP 1 Score: 174.096 bits (440), Expect = 3.874e-50 Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0 Query: 66 QVQGSQPSK-ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 Q Q S+ S+ + TPKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF S+DADRARE+LHSTVVEGRKIEVNNATARV T K S P NG + P++ Sbjct: 96 QTQNSENSESKPTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLHSTVVEGRKIEVNNATARVMTNKKSVTPYGNGWKLSPVV 208
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166918686|sp|A4F5G6.1|RFOX2_XENLA (RecName: Full=RNA binding protein fox-1 homolog 2; AltName: Full=Fox-1 homolog B; AltName: Full=RNA-binding motif protein 9; AltName: Full=RNA-binding protein 9) HSP 1 Score: 172.94 bits (437), Expect = 2.056e-49 Identity = 86/128 (67.19%), Postives = 96/128 (75.00%), Query Frame = 0 Query: 58 ALSPNSGGQVQGSQP--------SKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 A S G Q +G Q +++PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF S+DADRARE+LHSTVVEGRKIEVNNATARV T K S P NG + P++ Sbjct: 144 ASSTTDGSQTEGQQSQSQNNENSETKASPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLHSTVVEGRKIEVNNATARVMTNKKSVTPYGNGWKLSPVV 271
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|75070340|sp|Q5NVN8.1|RFOX1_PONAB (RecName: Full=RNA binding protein fox-1 homolog 1; AltName: Full=Ataxin-2-binding protein 1; AltName: Full=Fox-1 homolog A) HSP 1 Score: 171.014 bits (432), Expect = 7.010e-49 Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0 Query: 65 GQVQGSQPSK----ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 GQ Q +QPS+ +S PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K + P NG + P++ Sbjct: 100 GQPQ-TQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVV 215
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166897979|sp|Q9NWB1.2|RFOX1_HUMAN (RecName: Full=RNA binding protein fox-1 homolog 1; AltName: Full=Ataxin-2-binding protein 1; AltName: Full=Fox-1 homolog A; AltName: Full=Hexaribonucleotide-binding protein 1) HSP 1 Score: 171.014 bits (432), Expect = 8.070e-49 Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0 Query: 65 GQVQGSQPSK----ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 GQ Q +QPS+ +S PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K + P NG + P++ Sbjct: 100 GQPQ-TQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVV 215
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|75073784|sp|Q95KI0.1|RFOX1_MACFA (RecName: Full=RNA binding protein fox-1 homolog 1; AltName: Full=Ataxin-2-binding protein 1; AltName: Full=Fox-1 homolog A) HSP 1 Score: 170.629 bits (431), Expect = 8.116e-49 Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 0 Query: 63 SGGQVQGSQPSK----ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 + GQ Q +QPS+ +S PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K + P NG + P++ Sbjct: 100 TDGQPQ-TQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVV 217
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Match: gi|166898081|sp|Q9JJ43.3|RFOX1_MOUSE (RecName: Full=RNA binding protein fox-1 homolog 1; AltName: Full=Ataxin-2-binding protein 1; AltName: Full=Fox-1 homolog A) HSP 1 Score: 171.014 bits (432), Expect = 8.958e-49 Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 0 Query: 65 GQVQGSQPSK----ESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIP--NGLPIVPML 175 GQ Q +QPS+ +S PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTF NS+DADRARE+LH TVVEGRKIEVNNATARV T K + P NG + P++ Sbjct: 99 GQPQ-TQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVV 214
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|909580199|ref|XP_013146030.1| (PREDICTED: RNA binding protein fox-1 homolog 2, partial [Papilio polytes]) HSP 1 Score: 203.756 bits (517), Expect = 2.850e-60 Identity = 129/264 (48.86%), Postives = 144/264 (54.55%), Query Frame = 0 Query: 73 SKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKNEARVLDSQQQQQQQAAAQSHQTPQSSPALYNPYDPFL-----ANSLAQLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 S+ S PKRLHVSNIPFRFRDPDLRNMFG++GTILDVEIIFNERGSKGFGFVTFANS DA+RARE+LH TVVEGRKIEVNNATARVQTKKP ++PN +C L + YDPFL A+S +LQ N L L AA + + PA + L A V YG DPYLG SIGPV GYG A+YRS Y RFAPY Sbjct: 79 SQGSQPKRLHVSNIPFRFRDPDLRNMFGQYGTILDVEIIFNERGSKGFGFVTFANSGDAERARERLHGTVVEGRKIEVNNATARVQTKKPPAVPN-------VCVQWPEGLRVSGINWFYSVY---------------YDPFLAAAATADSNYRLQVNTL-------LSQFAAKPA-----------------VEPAPSLTPLAATYV------MYG--------------REYGDPYLGHSIGPVTGYGTAMYRSGYNRFAPY 276
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|91083063|ref|XP_967336.1| (PREDICTED: RNA binding protein fox-1 homolog 3 isoform X2 [Tribolium castaneum]) HSP 1 Score: 201.445 bits (511), Expect = 3.756e-58 Identity = 149/340 (43.82%), Postives = 178/340 (52.35%), Query Frame = 0 Query: 25 VAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPALSPNSGGQVQGS----QPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKNEARV--------------LDSQQQQQQQAAAQSHQTPQSSPAL--YNP------------YDPFLANSLAQLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSA-HAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 V+ S + Q QQ Q+ N + P S S G+ PSK PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DA+RAR++LH TVVEGRKIEVNNATARVQTKKP + LP VP++ ++A + AA H TP + AL Y P YDPFLA A DP + AA A++ L+ T +Q + ++ + A +AA G G RD ADPYLG IGP+ GYGAA+YRS Y RF PY Sbjct: 68 VSIVNSPALTQNQQPYKCDQQPQETETNGAVAPPTSEASDTSASGTPATIDPSKNQ-PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADAERARDRLHGTVVEGRKIEVNNATARVQTKKPPT----LPTVPVIQWSDATLRAGVAAIQRGRARAAYPAAAAAAAAAFARHPTPLAG-ALHGYTPVLNTLPVDGSVYYDPFLAAHAA-----------DPNYRLQAAAAATPLLKTPLSTAQQASYAAAATYTAVAARYGAAQPVAGYAAVAGYG------RD-----YADPYLGHGIGPMAGYGAAVYRSGYNRFTPY 379
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|642923484|ref|XP_008193529.1| (PREDICTED: RNA binding protein fox-1 homolog 3 isoform X1 [Tribolium castaneum]) HSP 1 Score: 201.445 bits (511), Expect = 4.710e-58 Identity = 149/340 (43.82%), Postives = 178/340 (52.35%), Query Frame = 0 Query: 25 VAQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPALSPNSGGQVQGS----QPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKNEARV--------------LDSQQQQQQQAAAQSHQTPQSSPAL--YNP------------YDPFLANSLAQLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSA-HAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 V+ S + Q QQ Q+ N + P S S G+ PSK PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DA+RAR++LH TVVEGRKIEVNNATARVQTKKP + LP VP++ ++A + AA H TP + AL Y P YDPFLA A DP + AA A++ L+ T +Q + ++ + A +AA G G RD ADPYLG IGP+ GYGAA+YRS Y RF PY Sbjct: 73 VSIVNSPALTQNQQPYKCDQQPQETETNGAVAPPTSEASDTSASGTPATIDPSKNQ-PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADAERARDRLHGTVVEGRKIEVNNATARVQTKKPPT----LPTVPVIQWSDATLRAGVAAIQRGRARAAYPAAAAAAAAAFARHPTPLAG-ALHGYTPVLNTLPVDGSVYYDPFLAAHAA-----------DPNYRLQAAAAATPLLKTPLSTAQQASYAAAATYTAVAARYGAAQPVAGYAAVAGYG------RD-----YADPYLGHGIGPMAGYGAAVYRSGYNRFTPY 384
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|1317984957|ref|XP_023290794.1| (RNA binding protein fox-1 homolog 1-like [Orussus abietinus]) HSP 1 Score: 202.216 bits (513), Expect = 7.961e-58 Identity = 140/280 (50.00%), Postives = 160/280 (57.14%), Query Frame = 0 Query: 78 PKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKN--EARVLDSQQQQQQQAAAQSHQTPQSSPAL---YNP--------------------YDPFLANSLAQLQANGLTGINDPRLQ-NLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DADRARE+LH TVVEGRKIEVNNATARVQTKKP+++PN +C EA L Q+ + A P S+ AL NP YDPFLA A N RLQ AA A+S L+ T +Q + ++ +A +A G A R+ ADPYLG SIGPV GYGA +YRS Y RFAPY Sbjct: 179 PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADADRARERLHGTVVEGRKIEVNNATARVQTKKPTTVPN-------VCVQWPEAAALRGVAIQRGRVGAARAAFPTSAAALALTRNPGPLAAAAAATALHPFGHAVYYDPFLAAHAATQDPNY-------RLQAAAAAAAASPLLKTPLSTAQQATYAAAATYTAVAARAYGAAAAAAQPVAGYAAVAGYGRE-----YADPYLGHSIGPVAGYGATVYRSGYNRFAPY 439
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|1080040749|ref|XP_018561345.1| (RNA binding protein fox-1 homolog 1-like isoform X2 [Anoplophora glabripennis]) HSP 1 Score: 199.519 bits (506), Expect = 2.307e-57 Identity = 145/337 (43.03%), Postives = 179/337 (53.12%), Query Frame = 0 Query: 26 AQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPALSPNSGGQVQGSQPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKNEARVLDSQQQQQQ---------------QAAAQSHQTPQSSPAL--YNP------------YDPFLANSLAQLQANGLTGINDPRLQNL-AALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSA-HAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 A + +Q+ Q+ + V + SN A Q + + ++ PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DA+RAR++LH TVVEGRKIEVNNATARVQTKKP + LP VP++ ++A + Q+ AA H TP + AL Y P YDPFLA A DP L AA A++ L+ T +Q + ++ + A +AA G G RD ADPYLG IGP+ GYGAA+YRS Y RF PY Sbjct: 87 ATYKCEQIPQESENSTTVQPPTSEASESSNTSA--------TQAATDASKNQPKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADAERARDRLHGTVVEGRKIEVNNATARVQTKKPPA----LPAVPVIQWSDATLRAGVAAIQRGRARAAYPTAAAAAAAAAFARHPTPLAG-ALHGYTPVLNTLPVDGSVYYDPFLAAHAA-----------DPNYTRLQAAAAATPLLKTPLSTAQQASYAAAATYTAVAARYGAAQPVAGYAAVAGYG------RD-----YADPYLGHGIGPMAGYGAAVYRSGYNRFTPY 388
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|1059859404|ref|XP_017788177.1| (PREDICTED: RNA binding protein fox-1 homolog 1-like [Habropoda laboriosa]) HSP 1 Score: 199.904 bits (507), Expect = 2.389e-57 Identity = 138/280 (49.29%), Postives = 158/280 (56.43%), Query Frame = 0 Query: 78 PKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKN--EARVLDSQQQQQQQAAAQSHQTPQSSPAL---YNP--------------------YDPFLANSLAQLQANGLTGINDPRLQ-NLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYR-SYQRFAPY 330 PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DADRARE+LH TVVEGRKIEVNNATARVQTKKP ++PN +C EA L Q+ + +A P S+ AL NP YDPFLA A N RLQ AA A+S L+ T +Q + ++ +A +A G A R+ ADPYLG IGPV GYGA +YR SY RF PY Sbjct: 142 PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADADRARERLHGTVVEGRKIEVNNATARVQTKKPPTVPN-------VCVQWPEAAALRGVAIQRGRVSAARAAFPTSAAALALARNPGPLAAAAAATALHPFAPAVYYDPFLAAHAATQDPNY-------RLQAAAAAAAASPLLKTPLSTAQQASYAAAATYTAVAARAYSAAAAAAQPVAGYAAVAGYGRE-----YADPYLGHGIGPVAGYGATVYRSSYNRFTPY 402
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|1325346242|ref|XP_023313238.1| (RNA binding protein fox-1 homolog 1-like isoform X1 [Anoplophora glabripennis]) HSP 1 Score: 200.29 bits (508), Expect = 3.485e-57 Identity = 145/337 (43.03%), Postives = 179/337 (53.12%), Query Frame = 0 Query: 26 AQQQSQQVQQQQQQLAAVAAAQQQHLNDSNNPALSPNSGGQVQGSQPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKNEARVLDSQQQQQQ---------------QAAAQSHQTPQSSPAL--YNP------------YDPFLANSLAQLQANGLTGINDPRLQNL-AALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSA-HAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 A + +Q+ Q+ + V + SN A Q + + ++ PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DA+RAR++LH TVVEGRKIEVNNATARVQTKKP + LP VP++ ++A + Q+ AA H TP + AL Y P YDPFLA A DP L AA A++ L+ T +Q + ++ + A +AA G G RD ADPYLG IGP+ GYGAA+YRS Y RF PY Sbjct: 125 ATYKCEQIPQESENSTTVQPPTSEASESSNTSA--------TQAATDASKNQPKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADAERARDRLHGTVVEGRKIEVNNATARVQTKKPPA----LPAVPVIQWSDATLRAGVAAIQRGRARAAYPTAAAAAAAAAFARHPTPLAG-ALHGYTPVLNTLPVDGSVYYDPFLAAHAA-----------DPNYTRLQAAAAATPLLKTPLSTAQQASYAAAATYTAVAARYGAAQPVAGYAAVAGYG------RD-----YADPYLGHGIGPMAGYGAAVYRSGYNRFTPY 426
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|1339089802|ref|XP_023706042.1| (RNA binding protein fox-1 homolog 2 isoform X14 [Cryptotermes secundus]) HSP 1 Score: 197.593 bits (501), Expect = 3.896e-57 Identity = 140/274 (51.09%), Postives = 154/274 (56.20%), Query Frame = 0 Query: 70 SQPSKESTPKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGL----PIVPMLCKNEARVLDSQ--------QQQQQQAAAQSHQTPQSSPALYNPYDPFLANSLAQLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYRS-YQRFAPY 330 S+P K PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DADRARE+LH TVVEGRKIEVNNATARVQTKKP ++PN VP L V S AA TP+++ YDPFLA A N RLQ A A+S A A + AA + +AA G G A DP YLG SIGPV GYGAA+YRS Y RFAPY Sbjct: 101 SEPGKNQ-PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADADRARERLHGTVVEGRKIEVNNATARVQTKKPPTVPNVFLTRNGTVPTLGYRLPAVPWSWLGGTGTPLTTPSTSTAAPLVLTPRTARRSSVYYDPFLAAHAATADPNY-------RLQASYAAAASYTAVA--------------ARAYGAAAAAAQPVAGYAAVAGYGREYA---DP--------YLGHSIGPVAGYGAAVYRSGYNRFAPY 341
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|826421297|ref|XP_012525605.1| (PREDICTED: RNA binding protein fox-1 homolog 2 isoform X3 [Monomorium pharaonis]) HSP 1 Score: 199.519 bits (506), Expect = 6.228e-57 Identity = 136/285 (47.72%), Postives = 152/285 (53.33%), Query Frame = 0 Query: 78 PKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKN--EARVLDSQQQQQQQAAAQSHQTPQSSPAL---YNP--------------------YDPFLANSLA------QLQANGLTGINDPRLQNLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYR-SYQRFAPY 330 PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DADRARE+LH TVVEGRKIEVNNATARVQTKKP ++PN +C EA L Q+ + A P S+ AL NP YDPFLA A +LQA P L+ SS T A + + +A A YG R+ ADPYLG IGPV GYGA +YR SY RF PY Sbjct: 168 PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADADRARERLHGTVVEGRKIEVNNATARVQTKKPPTVPN-------VCVQWPEAAALRGVAIQRGRVGAARATFPTSAAALALARNPGPLAAAAAATALHPFASAVYYDPFLAAHAATQDPNYRLQAAAAAAAASPLLKT---PLSSAQQATYAAAATYTAVAARAYGAAAAAAQPVAGYAAVAGYG---------RE-----YADPYLGHGIGPVAGYGATVYRGSYNRFTPY 428
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Match: gi|817066311|ref|XP_012254987.1| (RNA binding protein fox-1 homolog 2 isoform X3 [Athalia rosae]) HSP 1 Score: 199.134 bits (505), Expect = 9.790e-57 Identity = 135/281 (48.04%), Postives = 158/281 (56.23%), Query Frame = 0 Query: 78 PKRLHVSNIPFRFRDPDLRNMFGKFGTILDVEIIFNERGSKGFGFVTFANSSDADRAREQLHSTVVEGRKIEVNNATARVQTKKPSSIPNGLPIVPMLCKN--EARVLDSQQQQQQQAAAQSHQTPQSSPAL-YNP---------------------YDPFLANSLAQLQANGLTGINDPRLQ---NLAALASSGLVGTGGGGVRQGFAGLSPAAANLSLQAALVNQSAHAAYGGGGLPAALARDPTAAALADPYLGQSIGPVPGYGAALYR-SYQRFAPY 330 PKRLHVSNIPFRFRDPDLR MFG+FG ILDVEIIFNERGSKGFGFVTFANS+DADRARE+LH TVVEGRKIEVNNATARVQTKKP ++PN +C EA L Q+ + A++ ++ AL NP YDPFLA A N P ++ AA ASS L+ T +Q + ++ +A +A G A R+ ADPYLG IGPV GYGA +YR Y RFAPY Sbjct: 162 PKRLHVSNIPFRFRDPDLRAMFGQFGPILDVEIIFNERGSKGFGFVTFANSADADRARERLHGTVVEGRKIEVNNATARVQTKKPPTVPN-------VCVQWPEAAALRGVAIQRGRVGARTAFPAGAALALARNPNPLAAAAAASALHPAFAQTVYYDPFLAAHAATQDPNYRLQAKSPAMEAAAAAAAAASSPLLKTPLSTSQQATYAAAATYTAVAARAYGAAAAAAQPVAGYAAVAGYGRE-----YADPYLGHGIGPVAGYGATVYRGGYNRFAPY 430 The following BLAST results are available for this feature:
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of rna binding protein fox-1 homolog 3 isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold75_size407189:26759..37460- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold75_size407189-snap-gene-0.13 ID=maker-scaffold75_size407189-snap-gene-0.13|Name=rna binding protein fox-1 homolog 3 isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=10702bp|location=Sequence derived from alignment at scaffold75_size407189:26759..37460- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rna binding protein fox-1 homolog 3 isoform x2' has the following synonyms
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