poly protein, maker-scaffold781_size98004-snap-gene-0.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of poly protein vs. L. salmonis genes
Match: EMLSAG00000002862 (supercontig:LSalAtl2s:LSalAtl2s16595:2:760:1 gene:EMLSAG00000002862 transcript:EMLSAT00000002862 description:"augustus-LSalAtl2s16595-processed-gene-0.0") HSP 1 Score: 117.087 bits (292), Expect = 1.347e-33 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKTGGRIKSSFQEGRMELRNTP-RPGGKSPAEIVYGHPIRSRLVA------------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGT 127 WGI HR+S H+PQSNGL +SAVK++K LL+KTG +FQEG +ELRNTP R G SP++IV+G P+RSRL A + + ++ E A Y+ ++ +L P IG +V IQD SK+WDR T Sbjct: 85 WGIAHRLSSPHFPQSNGLAESAVKSIKALLLKTGNTESEAFQEGLLELRNTPLRHGSLSPSQIVFGRPMRSRLPARNLSLAEDWQXXLNXXXRHIARQHEYAKNHYNKTSNELKPIPIGSKVWIQDPTSKIWDRXAT 221
BLAST of poly protein vs. L. salmonis genes
Match: EMLSAG00000004669 (supercontig:LSalAtl2s:LSalAtl2s24318:3:443:1 gene:EMLSAG00000004669 transcript:EMLSAT00000004669 description:"augustus-LSalAtl2s24318-processed-gene-0.0") HSP 1 Score: 102.449 bits (254), Expect = 3.867e-29 Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 0 Query: 17 QSNGLVQSAVKTLKTLLMKTGGRIKSSFQEGRMELRNTP-RPGGKSPAEIVYGHPIRSRLVA------------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 QSNGL +SAVK++K LL+KTG +FQEG +ELRNTP R G SP++IV+G P+RSRL A +++ D+ K E A Y+ ++ +L P IG +V IQD SK+WDR TA +GK Sbjct: 1 QSNGLAESAVKSIKALLLKTGNTESEAFQEGLLELRNTPLRHGSLSPSQIVFGRPMRSRLPAHNLSLAEDWQERLKEHDRXXXKQHEYAKNHYNKTSNELKPIPIGSKVWIQDPTSKIWDR--TATVQGK 128
BLAST of poly protein vs. L. salmonis genes
Match: EMLSAG00000006569 (supercontig:LSalAtl2s:LSalAtl2s35:845590:849230:1 gene:EMLSAG00000006569 transcript:EMLSAT00000006569 description:"snap_masked-LSalAtl2s35-processed-gene-8.19") HSP 1 Score: 73.1738 bits (178), Expect = 3.587e-18 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKTGGRIKSSFQEGRMELRNTP-RPGGKSPAEIVYGHPIRSRL 75 WGI HR+S H+ QS L +SAVK++K L+K G +FQEG EL+NTP R G P +IV+G +RSRL Sbjct: 26 WGISHRVSSPHFCQSIRLAESAVKSIKARLLKAGNTDSEAFQEGLFELKNTPLRQGSLIPVQIVFGIIMRSRL 98
BLAST of poly protein vs. nr
Match: gi|1061482737|gb|ODN00004.1| (Transposon Tf2-6 polyprotein [Orchesella cincta]) HSP 1 Score: 115.546 bits (288), Expect = 3.317e-27 Identity = 66/149 (44.30%), Postives = 88/149 (59.06%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKT---GGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRL------------VAMEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAI---YRGKS 134 WGI H S HYPQ+NGL +S VK L+ KT G +FQ G MELRNTPR G+SPAE+V+G PIR++L M + D +AS++ EKA Y+++A+ LP G VR+QD ++K W RIG I +RG+S Sbjct: 1099 WGIVHDPSSPHYPQANGLAESGVKAASHLIAKTSPNGDLTTDAFQLGLMELRNTPRADGRSPAELVFGFPIRTKLPLHRAQFAKEWRKQMAEADTRASRLKEKALSHYNTTARPLPHLKRGEIVRVQDPVTKEWTRIGEVIDAHHRGRS 1247
BLAST of poly protein vs. nr
Match: gi|1061467646|gb|ODM88365.1| (hypothetical protein Ocin01_18317 [Orchesella cincta]) HSP 1 Score: 111.694 bits (278), Expect = 7.205e-26 Identity = 69/152 (45.39%), Postives = 90/152 (59.21%), Query Frame = 0 Query: 1 LIDWGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKT---GGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPI-------RSRLVA-----MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAI---YRGKS 134 L+ WGI+H S HYPQSNGL +SAVK +K LL KT G +FQ G +ELRNTPR G+SPA++V+G P+ RSR A +D D +AS++ +KAT RY+ +AK L G V +QD SK W +G I RG+S Sbjct: 334 LLKWGIKHTTSSPHYPQSNGLAESAVKAVKYLLAKTSPSGDLENEAFQLGLLELRNTPRADGRSPAQMVFGQPMRTTLPLHRSRFAAEWKSQHKDCDIRASRLRQKATERYNKAAKPLKGLQRGDIVLLQDPKSKRWSTLGEIIDTTRRGRS 485
BLAST of poly protein vs. nr
Match: gi|338224374|gb|AEI88069.1| (polyprotein-like protein, partial [Scylla paramamosain]) HSP 1 Score: 95.5153 bits (236), Expect = 1.036e-22 Identity = 47/116 (40.52%), Postives = 75/116 (64.66%), Query Frame = 0 Query: 1 LIDWGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKT---GGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRL------------VAMEDQDQKASKIMEKATVRYDSSAK 101 L WG+ HR+S HYP+SNG ++AVK++K L++ T G + +F G +ELRNTPR G+SPA++++GHP+RS + A ++ D KA ++ +KA +R+D+SA+ Sbjct: 5 LARWGVEHRVSSPHYPRSNGHAEAAVKSVKKLILTTTQQGHLDEDAFARGLLELRNTPRAEGRSPAQVLFGHPMRSCVPAHHRSYAQQWQRAADECDAKAERLRKKAKLRHDASAR 120
BLAST of poly protein vs. nr
Match: gi|1022753684|gb|KZS02194.1| (Uncharacterized protein APZ42_000862, partial [Daphnia magna]) HSP 1 Score: 96.2857 bits (238), Expect = 5.861e-22 Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 0 Query: 1 LIDWGIRHRISIAHYPQSNGLVQSAVKTLKTLLMK---TGGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA------------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 L WG++ S HYPQSNG V++AV K L+ K +G F G +E RNTPR G SPAE+V+GH +RS + A ME +D++A +I RYD A+ L P +G VRI + KLWD++G + G+ Sbjct: 31 LRQWGVQWGNSTPHYPQSNGHVEAAVAATKELVTKISPSGDLSSHEFSRGMLEFRNTPRENGVSPAEMVFGHQLRSIIPAHRTSYAARWQAVMEGRDRQA-EIDASVKFRYDKHARPLAPLLLGTHVRIWNPKLKLWDKVGVIVSVGR 177
BLAST of poly protein vs. nr
Match: gi|1022755988|gb|KZS02847.1| (Uncharacterized protein APZ42_034555 [Daphnia magna]) HSP 1 Score: 96.2857 bits (238), Expect = 1.704e-20 Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKTG--GRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA------------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 WG+ S +YPQSN ++A+ +K L+ K G I F +G +E +NTP+ SPAE+V+GH +RS + A ME ++ +A+ I RYD +A+ L P SIG VRI+D SKLWDRIG + G+ Sbjct: 1199 WGVAWGNSTPNYPQSNSHAEAALAAMKNLMAKISPSGVISDEFAQGMLEFQNTPKENAFSPAEMVFGHSLRSIIPAHRTSYATRWQTVMEAREWQAA-IDASVKFRYDENARPLTPLSIGTDVRIRDPKSKLWDRIGVVVGIGR 1341
BLAST of poly protein vs. nr
Match: gi|1022712236|gb|KZR95993.1| (Uncharacterized protein APZ42_009921, partial [Daphnia magna]) HSP 1 Score: 92.4337 bits (228), Expect = 1.732e-20 Identity = 55/148 (37.16%), Postives = 78/148 (52.70%), Query Frame = 0 Query: 1 LIDWGIRHRISIAHYPQSNGLVQSAVKTLKTLLMK---TGGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA-----------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGKS 134 L WG+ S HYPQSNG ++AVKT+K L++K +G F G +E RNTP G SPA+IV+GH +RS + A + D ++ ++ RYD ++ LP IG VR+QD +KLW G + G+S Sbjct: 14 LKRWGVSWGNSTTHYPQSNGHAEAAVKTVKELVLKLAPSGDLSSEEFLAGLLEFRNTPHATGLSPAQIVFGHQLRSMVPAHRSSYSNQWKDVMDARERQAEADANTKFRYDLRSRPLPSLPIGAPVRVQDPKTKLWSHSGVIVEVGQS 161
BLAST of poly protein vs. nr
Match: gi|1022753853|gb|KZS02238.1| (Uncharacterized protein APZ42_000796 [Daphnia magna]) HSP 1 Score: 94.3597 bits (233), Expect = 2.251e-20 Identity = 57/144 (39.58%), Postives = 77/144 (53.47%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMK---TGGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVAM---------EDQDQKASKIMEKATV--RYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 WG+ S HYPQSNG ++AVK +K L+ K +G +F G +E RN P G SPA+IV+GH +RS + A E + K A V RYD+ + L P SIG VR+QD +KLWDR+G + G+ Sbjct: 108 WGVEWGNSSPHYPQSNGHAEAAVKAVKELVAKLAPSGDLTSEAFLTGLLEFRNMPHESGLSPAQIVFGHQLRSIIPAHRSSYASQWKEAIAAREHKAAADAAVRFRYDARTRPLHPLSIGSSVRVQDPDTKLWDRVGVIVAIGR 251
BLAST of poly protein vs. nr
Match: gi|1022752700|gb|KZS01941.1| (Uncharacterized protein APZ42_001222, partial [Daphnia magna]) HSP 1 Score: 91.2781 bits (225), Expect = 8.124e-20 Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMK---TGGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA-----------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 WG+ S HYPQSNG ++AVKT+K L++K +G F G +E RNTP G SPA+IV+GH +RS + A + D ++ ++ RYD ++ LP +G VR+QD +KLW G + G+ Sbjct: 17 WGVSWGNSTTHYPQSNGHAEAAVKTVKELVLKLAPSGDLSSEEFLAGLLEFRNTPHATGLSPAQIVFGHQLRSMVPAHRSSYSNQWKDVMDARERQAEADANTKFRYDLRSRPLPSLPVGAPVRVQDPKTKLWSHSGVIVAVGQ 160
BLAST of poly protein vs. nr
Match: gi|1022759994|gb|KZS06265.1| (Uncharacterized protein APZ42_030317 [Daphnia magna]) HSP 1 Score: 93.5893 bits (231), Expect = 1.574e-19 Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMK---TGGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA-----------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 WG+ S HYPQSNG ++AVKT+K L++K +G F G +E RNTP G SPA+IV+GH +RS + A + D ++ ++ RYD ++ LP S+G VR+QD +KLW G + G+ Sbjct: 799 WGVSWGNSTPHYPQSNGHAEAAVKTVKELVLKLAPSGDLSSEEFLAGLLEFRNTPHATGLSPAQIVFGHQLRSMVPAHRSSYFNQWKDVMDARERQAEADANTKFRYDLRSRPLPSLSVGSPVRVQDPKTKLWSHSGVIVAVGQ 942
BLAST of poly protein vs. nr
Match: gi|1022769843|gb|KZS14299.1| (Uncharacterized protein APZ42_020375 [Daphnia magna]) HSP 1 Score: 93.2041 bits (230), Expect = 2.420e-19 Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 4 WGIRHRISIAHYPQSNGLVQSAVKTLKTLLMKT--GGRIKSSFQEGRMELRNTPRPGGKSPAEIVYGHPIRSRLVA------------MEDQDQKASKIMEKATVRYDSSAKKLPPPSIGHQVRIQDFMSKLWDRIGTAIYRGK 133 WG+ S HYPQSNG ++AV +K +L K G F +G +E RNT R G SPAE+V+ H +RS + A ME Q+ + + RYD +A+ L P IG VRI+D SKLWDR+G + G+ Sbjct: 954 WGVAWGNSTPHYPQSNGHAEAAVAAMKDVLAKILPSGVTSDDFAKGILEFRNTTRENGSSPAEMVFRHSLRSIIPAHRTSYATRWQTVMEAQELWDASV----KFRYDENARPLAPLFIGTDVRIRDPKSKLWDRVGVVVGIGR 1093 The following BLAST results are available for this feature:
BLAST of poly protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of poly protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of poly protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold781_size98004:54438..54902- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold781_size98004-snap-gene-0.19 ID=maker-scaffold781_size98004-snap-gene-0.19|Name=poly protein|organism=Tigriopus kingsejongensis|type=gene|length=465bp|location=Sequence derived from alignment at scaffold781_size98004:54438..54902- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'poly protein' has the following synonyms
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