At1g14870, maker-scaffold828_size91184-snap-gene-0.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of At1g14870 vs. L. salmonis genes
Match: EMLSAG00000000041 (supercontig:LSalAtl2s:LSalAtl2s1006:83325:83686:-1 gene:EMLSAG00000000041 transcript:EMLSAT00000000041 description:"augustus_masked-LSalAtl2s1006-processed-gene-0.9") HSP 1 Score: 71.2478 bits (173), Expect = 1.112e-17 Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 0 Query: 19 VTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARA 117 +T W+ D T G FC C + A++L + LYC LSC P + +FLLR + R +YGIEG +DA+ + CC PC CQ +EIK R Sbjct: 1 MTTTWKQSLCGXCGDMETCCCGTFCGLCFTYQQAENLGKPGILYCLLSCIFPCIPIFLLRGEAREKYGIEGSTGEDAMTAFCCGPCVQCQTGTEIKERG 99
BLAST of At1g14870 vs. SwissProt
Match: gi|82183691|sp|Q6DK99.1|CNFNB_XENLA (RecName: Full=Cornifelin homolog B) HSP 1 Score: 53.1434 bits (126), Expect = 5.453e-9 Identity = 37/101 (36.63%), Postives = 47/101 (46.53%), Query Frame = 0 Query: 16 MDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 M +++W +C +D T L G F L CK +KD E CCL C V +R R RY IEG D +C C PC CQ+ E+KAR Sbjct: 16 MSSNSSQWNSDVFDCCEDMGTCLCGTFVPCILACKVSKDYGE----CCCLPCL--FGSVLAVRTGIRERYHIEGSICNDWVCLSFCAPCTLCQMARELKAR 110
BLAST of At1g14870 vs. SwissProt
Match: gi|34922849|sp|Q9NZF1.1|PLAC8_HUMAN (RecName: Full=Placenta-specific gene 8 protein; AltName: Full=Protein C15) HSP 1 Score: 51.6026 bits (122), Expect = 2.082e-8 Identity = 35/100 (35.00%), Postives = 46/100 (46.00%), Query Frame = 0 Query: 20 TNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARAGL 119 + WQ +CF D L G FC CL C+ A D+ E CCL C + +R R RYGI G D + + CC C CQI+ +I R + Sbjct: 23 NSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE-----CCL-CGTSVA----MRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRRRAM 112
BLAST of At1g14870 vs. SwissProt
Match: gi|116248581|sp|Q3ZCB2.1|PLAC8_BOVIN (RecName: Full=Placenta-specific gene 8 protein) HSP 1 Score: 51.2174 bits (121), Expect = 2.518e-8 Identity = 35/97 (36.08%), Postives = 46/97 (47.42%), Query Frame = 0 Query: 20 TNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 + WQ +CF D L G FC CL C+ A D+ E CCL C + +R R RYGI G D + + CC C+ CQI+ +I R Sbjct: 24 NSNWQTGLCDCFSDCGVCLCGTFCFTCLACQVASDMNE-----CCL-CGTSVA----MRTLYRTRYGIPGSICDDFMVTHCCPLCSLCQIKRDINRR 110
BLAST of At1g14870 vs. SwissProt
Match: gi|75042520|sp|Q5REK4.1|PLAC8_PONAB (RecName: Full=Placenta-specific gene 8 protein) HSP 1 Score: 51.2174 bits (121), Expect = 2.687e-8 Identity = 35/100 (35.00%), Postives = 46/100 (46.00%), Query Frame = 0 Query: 20 TNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARAGL 119 + WQ +CF D L G FC CL C+ A D+ E CCL C + +R R RYGI G D + + CC C CQI+ +I R + Sbjct: 23 NSNWQTGMCDCFSDCGVCLCGTFCFPCLGCQVAADMNE-----CCL-CGTSVA----MRTLYRTRYGIPGSICDDYMATFCCPHCTLCQIKRDINRRRAM 112
BLAST of At1g14870 vs. SwissProt
Match: gi|82185557|sp|Q6NUC1.1|CNFNA_XENLA (RecName: Full=Cornifelin homolog A) HSP 1 Score: 50.8322 bits (120), Expect = 3.792e-8 Identity = 35/101 (34.65%), Postives = 47/101 (46.53%), Query Frame = 0 Query: 16 MDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 M +++W +C +D L G F L CK ++D E CCL C + +R R RY IEG KD +C C PCA CQ+ E+K R Sbjct: 16 MTSNSSQWNSDVFDCCEDMGVCLCGTFVPCILACKVSQDFGE----CCCLPCL--FGSILAVRTGIRERYHIEGSICKDWVCLSFCGPCALCQMARELKTR 110
BLAST of At1g14870 vs. SwissProt
Match: gi|34922844|sp|Q9JI48.1|PLAC8_MOUSE (RecName: Full=Placenta-specific gene 8 protein; AltName: Full=Onzin; AltName: Full=Protein C15) HSP 1 Score: 47.7506 bits (112), Expect = 4.737e-7 Identity = 32/100 (32.00%), Postives = 44/100 (44.00%), Query Frame = 0 Query: 20 TNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARAGL 119 + WQ +CF D L G FC CL C+ A D+ E CCL +R R RYGI G D + + C C+ CQ++ +I R + Sbjct: 20 NSNWQTSLCDCFSDCGVCLCGTFCFTCLGCQVAADMNE-----CCLC-----GTTVAMRTLYRTRYGIPGSICDDYMVTLFCPVCSVCQLKRDINRRRAM 109
BLAST of At1g14870 vs. SwissProt
Match: gi|118572231|sp|Q0VBW2.1|CNFN_BOVIN (RecName: Full=Cornifelin) HSP 1 Score: 46.9802 bits (110), Expect = 9.053e-7 Identity = 33/96 (34.38%), Postives = 44/96 (45.83%), Query Frame = 0 Query: 21 NEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 ++W +C D L G F CL C+ + D E CC + + P G+ LR R RY I+G KD C PCA CQ+ E+K R Sbjct: 21 SDWHTGLTDCCNDMPVCLCGTFAPLCLACRISDDFGE-----CCCTPYLP-GGLHSLRTGMRERYRIQGSIGKDWAALTFCLPCALCQMARELKIR 110
BLAST of At1g14870 vs. nr
Match: gi|225717880|gb|ACO14786.1| (At1g14870 [Caligus clemensi]) HSP 1 Score: 68.5514 bits (166), Expect = 1.342e-12 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 0 Query: 42 FCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARA 117 FC C I A+++ + LYC LSC P + +FLLR + R +YG+EG DA+CS CC C CQ +EIK R Sbjct: 24 FCTPCSIYGQAENIGKSGILYCLLSCIFPCIPIFLLRSEAREKYGVEGSTADDAICSFCCGSCVLCQTGAEIKERG 99
BLAST of At1g14870 vs. nr
Match: gi|1168916726|ref|XP_020501288.1| (cornifelin homolog A-like [Labrus bergylta]) HSP 1 Score: 67.3958 bits (163), Expect = 5.519e-12 Identity = 43/116 (37.07%), Postives = 55/116 (47.41%), Query Frame = 0 Query: 3 STSIEGTSKLRLTMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQM--PLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 S + T MD V+N+W +C +D C+C+ C CK A + E + PL PI LR R RYGIEG KD + +CCC PC+ CQI EIK R Sbjct: 2 SVKMVVTQPRPFIMDSVSNQWTSGICDCLQDLPQCCLSCWCSPCFACKTAHEAGECLCLPLLDACGLIPPINTA--LRVSVRQRYGIEGTVFKDCVYACCCGPCSWCQIAREIKTR 115
BLAST of At1g14870 vs. nr
Match: gi|1325276878|ref|XP_023323093.1| (cornifelin homolog [Eurytemora affinis]) HSP 1 Score: 66.2402 bits (160), Expect = 1.492e-11 Identity = 43/103 (41.75%), Postives = 52/103 (50.49%), Query Frame = 0 Query: 17 DVVTNEWQLKELECFKDPMTMLFGCFCAECLIC--KNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARA 117 ++V NEWQ L CF D GC C L +NA+ ++ L P V V L R TR YGIEGEP+ D +C CC C NCQI E KAR+ Sbjct: 3 ELVHNEWQHSILGCFSDMGICFRGCCCCMPLCMMCENAEKTGNSGLMWTLLVLCVPTVAVSLTRTATREIYGIEGEPVMDWVCGCCLPACTNCQIAMEHKARS 105
BLAST of At1g14870 vs. nr
Match: gi|1308551745|ref|XP_023151114.1| (cornifelin homolog A-like [Amphiprion ocellaris]) HSP 1 Score: 65.0846 bits (157), Expect = 4.065e-11 Identity = 38/105 (36.19%), Postives = 51/105 (48.57%), Query Frame = 0 Query: 14 LTMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQM--PLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 MD +N+W +CF+D F +C C C A+D E + PL C PI +R R RYGIEG +D + +C C PC+ CQI E+K R Sbjct: 9 FIMDTTSNQWTSGICDCFQDLPQCCFAFWCFPCFTCITARDAGECLCLPLLDCFGSIPPITTA--IRGSVRQRYGIEGTIFQDCVYACFCYPCSWCQIAREMKTR 111
BLAST of At1g14870 vs. nr
Match: gi|1207968397|ref|XP_021374829.1| (cornifelin-like isoform X2 [Mizuhopecten yessoensis] >gi|1207968399|ref|XP_021374830.1| cornifelin-like isoform X2 [Mizuhopecten yessoensis] >gi|1207968401|ref|XP_021374831.1| cornifelin-like isoform X2 [Mizuhopecten yessoensis] >gi|1205889298|gb|OWF40192.1| Cornifelin [Mizuhopecten yessoensis]) HSP 1 Score: 63.929 bits (154), Expect = 1.789e-10 Identity = 36/106 (33.96%), Postives = 49/106 (46.23%), Query Frame = 0 Query: 9 TSKLRLTMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIK 114 T+ L +T W CF D + L CFC C+ CK A + E CC +C + G +R K R GI+G D++ CCC PCA CQ+ E+ Sbjct: 32 TNGLMVTGLTGHRHWSTGLFGCFDDIPSCLLTCFCMPCMECKTASRIGE-----CCCMPYCVMGGSLAMRTKIRTVGGIQGSVSNDSMTLCCCGPCATCQMDRELT 132
BLAST of At1g14870 vs. nr
Match: gi|1207968395|ref|XP_021374828.1| (cornifelin-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 63.929 bits (154), Expect = 3.272e-10 Identity = 36/106 (33.96%), Postives = 49/106 (46.23%), Query Frame = 0 Query: 9 TSKLRLTMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIK 114 T+ L +T W CF D + L CFC C+ CK A + E CC +C + G +R K R GI+G D++ CCC PCA CQ+ E+ Sbjct: 56 TNGLMVTGLTGHRHWSTGLFGCFDDIPSCLLTCFCMPCMECKTASRIGE-----CCCMPYCVMGGSLAMRTKIRTVGGIQGSVSNDSMTLCCCGPCATCQMDRELT 156
BLAST of At1g14870 vs. nr
Match: gi|928041835|ref|XP_013869719.1| (PREDICTED: cornifelin homolog B-like [Austrofundulus limnaeus]) HSP 1 Score: 62.7734 bits (151), Expect = 5.656e-10 Identity = 37/105 (35.24%), Postives = 50/105 (47.62%), Query Frame = 0 Query: 22 EWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQ--MPL--------YCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 EW +CF+DP T +GC+C CL C E +PL Y F P +R R +YGI+G L+D SCCC C+ CQ+ E+K+R Sbjct: 8 EWDSNVFDCFEDPQTCCYGCWCGPCLACTVTGRFGENRWLPLIDICSNMLYFGSPIFVP-PAALTVRVAMRNKYGIKGSILEDIAISCCCATCSWCQMHRELKSR 111
BLAST of At1g14870 vs. nr
Match: gi|1129919945|ref|XP_019724214.1| (PREDICTED: cornifelin homolog A-like isoform X4 [Hippocampus comes] >gi|1129919947|ref|XP_019724215.1| PREDICTED: cornifelin homolog A-like isoform X4 [Hippocampus comes] >gi|1129919949|ref|XP_019724216.1| PREDICTED: cornifelin homolog A-like isoform X4 [Hippocampus comes]) HSP 1 Score: 62.003 bits (149), Expect = 8.079e-10 Identity = 38/104 (36.54%), Postives = 49/104 (47.12%), Query Frame = 0 Query: 15 TMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQM--PLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 TM + N+W +CF D F +C C CK + D E + PL P+ LR R RYGI+G D + +CCC PC CQI EI+AR Sbjct: 15 TMTSLNNQWSSDICDCFDDLPQCCFAFWCLPCFTCKVSHDAGECLCLPLLDAFGVIPPMTTA--LRVSVRQRYGIQGTVCHDCIYACCCGPCTWCQISREIQAR 116
BLAST of At1g14870 vs. nr
Match: gi|1108969945|ref|XP_010751573.2| (PREDICTED: cornifelin homolog A-like [Larimichthys crocea] >gi|808872239|gb|KKF21720.1| Cornifelin [Larimichthys crocea]) HSP 1 Score: 61.2326 bits (147), Expect = 1.308e-9 Identity = 40/120 (33.33%), Postives = 54/120 (45.00%), Query Frame = 0 Query: 1 LKSTSIEGTSKLRLTMDVVTNEWQLKELECFKDPMTMLFGCFCAECLICKNAKDLEEQM--PLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKARAG 118 + T++ G + + M V NEW +CF+D +C C CK + + E + PL PI +R R RYGIEG KD +CCC PC CQ+ EIK R Sbjct: 1 MSVTTVVGQPRPYI-MTTVNNEWNSGICDCFQDLPQCCLSFWCPSCFACKTSYEAGECLCLPLLNGYGLIPPIT--IAIRVSIRQRYGIEGTICKDCAYACCCGPCTWCQVAREIKTRTN 117
BLAST of At1g14870 vs. nr
Match: gi|1325276919|ref|XP_023323114.1| (cornifelin homolog [Eurytemora affinis]) HSP 1 Score: 60.4622 bits (145), Expect = 1.740e-9 Identity = 39/104 (37.50%), Postives = 52/104 (50.00%), Query Frame = 0 Query: 16 MDVVTNEWQLKELECFKDPMTMLFGCFCAECLI---CKNAKDLEEQMPLYCCLSCFCPIVGVFLLRQKTRARYGIEGEPLKDALCSCCCTPCANCQIQSEIKAR 116 M++V NEWQ C D + + F FC L+ C+NA+ + LSC P + L+R TR YGIEG + D + C CT C N Q+ E KAR Sbjct: 1 MELVQNEWQSGVCGCCGD-IKICFKGFCCNGLMWMTCENAEKAGHDELTWALLSCLIPSLASPLIRTATREMYGIEGSVVSDWIFGCFCTNCVNTQMAMEHKAR 103 The following BLAST results are available for this feature:
BLAST of At1g14870 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of At1g14870 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of At1g14870 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold828_size91184:66049..67219- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold828_size91184-snap-gene-0.16 ID=maker-scaffold828_size91184-snap-gene-0.16|Name=At1g14870|organism=Tigriopus kingsejongensis|type=gene|length=1171bp|location=Sequence derived from alignment at scaffold828_size91184:66049..67219- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'At1g14870' has the following synonyms
Add to Basket
|