rho guanine nucleotide exchange factor 11-like, maker-scaffold82_size396747-snap-gene-1.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho guanine nucleotide exchange factor 11-like vs. L. salmonis genes
Match: EMLSAG00000013029 (supercontig:LSalAtl2s:LSalAtl2s999:61196:94625:-1 gene:EMLSAG00000013029 transcript:EMLSAT00000013029 description:"maker-LSalAtl2s999-snap-gene-1.11") HSP 1 Score: 79.337 bits (194), Expect = 1.017e-17 Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 0 Query: 56 ITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLA-----RQFTVKRQCELALATKRLDKLKEELENLR-KGKPPSR 133 +TAP P N+EAVR L DEK HT+ LM EQE+RNVD LRQ+L ++K+Q EL LA +RL KL+E+LE +R K + P+R Sbjct: 134 VTAPQPPNSEAVRILTDEKYHTIQLMAEQERRNVDGLRQNLVTLQPESDESLKKQEELELALRRLIKLEEQLEQMREKVQTPNR 217
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|1061116663|ref|XP_017884358.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X4 [Ceratina calcarata]) HSP 1 Score: 75.0998 bits (183), Expect = 6.162e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 50 GSSKERITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 GS RIT P P + E +RQL+ E+ HT LM+E+EQ VD+LR +LA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 154 GSCNARITGPQPVDHEKLRQLETERAHTFQLMLEKEQSYVDKLRSELAKASTGSSNVNVVAVQAELAGAERRVRTLQEQLATITTNE---QLCSLVTNTSCSPGYYSPLSSSSGDVPPPLPSRKSLS 277
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|1061116659|ref|XP_017884356.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X2 [Ceratina calcarata]) HSP 1 Score: 75.0998 bits (183), Expect = 6.220e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 50 GSSKERITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 GS RIT P P + E +RQL+ E+ HT LM+E+EQ VD+LR +LA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 154 GSCNARITGPQPVDHEKLRQLETERAHTFQLMLEKEQSYVDKLRSELAKASTGSSNVNVVAVQAELAGAERRVRTLQEQLATITTNE---QLCSLVTNTSCSPGYYSPLSSSSGDVPPPLPSRKSLS 277
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|1061116661|ref|XP_017884357.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X3 [Ceratina calcarata]) HSP 1 Score: 75.0998 bits (183), Expect = 6.460e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 50 GSSKERITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 GS RIT P P + E +RQL+ E+ HT LM+E+EQ VD+LR +LA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 154 GSCNARITGPQPVDHEKLRQLETERAHTFQLMLEKEQSYVDKLRSELAKASTGSSNVNVVAVQAELAGAERRVRTLQEQLATITTNE---QLCSLVTNTSCSPGYYSPLSSSSGDVPPPLPSRKSLS 277
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|1061116657|ref|XP_017884355.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X1 [Ceratina calcarata]) HSP 1 Score: 75.0998 bits (183), Expect = 6.461e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 50 GSSKERITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 GS RIT P P + E +RQL+ E+ HT LM+E+EQ VD+LR +LA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 154 GSCNARITGPQPVDHEKLRQLETERAHTFQLMLEKEQSYVDKLRSELAKASTGSSNVNVVAVQAELAGAERRVRTLQEQLATITTNE---QLCSLVTNTSCSPGYYSPLSSSSGDVPPPLPSRKSLS 277
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|1061116665|ref|XP_017884359.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X5 [Ceratina calcarata]) HSP 1 Score: 74.7146 bits (182), Expect = 7.704e-12 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 50 GSSKERITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 GS RIT P P + E +RQL+ E+ HT LM+E+EQ VD+LR +LA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 83 GSCNARITGPQPVDHEKLRQLETERAHTFQLMLEKEQSYVDKLRSELAKASTGSSNVNVVAVQAELAGAERRVRTLQEQLATITTNE---QLCSLVTNTSCSPGYYSPLSSSSGDVPPPLPSRKSLS 206
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|805774487|ref|XP_012137493.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X1 [Megachile rotundata] >gi|805774490|ref|XP_012137494.1| PREDICTED: rho guanine nucleotide exchange factor 12 isoform X1 [Megachile rotundata]) HSP 1 Score: 70.4774 bits (171), Expect = 2.003e-10 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 55 RITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 RIT P P + E RQL+ ++ HT LM+E+EQ VD+LR DLA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 166 RITGPQPVDFEKKRQLETQRVHTFQLMLEKEQSYVDKLRSDLAKASTSSGNVNIVALQAELAGAERRVRTLQEQLAAITTNE---QLCSLVTNTSCSPGYYSPLSGSSGDVPPPLPSRKSLS 284
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|805774493|ref|XP_012137495.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X2 [Megachile rotundata]) HSP 1 Score: 70.4774 bits (171), Expect = 2.022e-10 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 55 RITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 RIT P P + E RQL+ ++ HT LM+E+EQ VD+LR DLA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 166 RITGPQPVDFEKKRQLETQRVHTFQLMLEKEQSYVDKLRSDLAKASTSSGNVNIVALQAELAGAERRVRTLQEQLAAITTNE---QLCSLVTNTSCSPGYYSPLSGSSGDVPPPLPSRKSLS 284
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|383852854|ref|XP_003701940.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X6 [Megachile rotundata]) HSP 1 Score: 70.4774 bits (171), Expect = 2.068e-10 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 55 RITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 RIT P P + E RQL+ ++ HT LM+E+EQ VD+LR DLA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 166 RITGPQPVDFEKKRQLETQRVHTFQLMLEKEQSYVDKLRSDLAKASTSSGNVNIVALQAELAGAERRVRTLQEQLAAITTNE---QLCSLVTNTSCSPGYYSPLSGSSGDVPPPLPSRKSLS 284
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|805774507|ref|XP_012137500.1| (PREDICTED: rho guanine nucleotide exchange factor 12 isoform X7 [Megachile rotundata]) HSP 1 Score: 70.4774 bits (171), Expect = 2.209e-10 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 55 RITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 RIT P P + E RQL+ ++ HT LM+E+EQ VD+LR DLA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 166 RITGPQPVDFEKKRQLETQRVHTFQLMLEKEQSYVDKLRSDLAKASTSSGNVNIVALQAELAGAERRVRTLQEQLAAITTNE---QLCSLVTNTSCSPGYYSPLSGSSGDVPPPLPSRKSLS 284
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Match: gi|805774499|ref|XP_012137498.1| (PREDICTED: rho guanine nucleotide exchange factor 11 isoform X4 [Megachile rotundata]) HSP 1 Score: 70.0922 bits (170), Expect = 2.479e-10 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 55 RITAPIPANTEAVRQLQDEKTHTMHLMVEQEQRNVDQLRQDLARQFT-------VKRQCELALATKRLDKLKEELENLRKGKPPSRPTSLIDPWDGAPDTPSPPPRPAATLPPPLPARNKAS 169 RIT P P + E RQL+ ++ HT LM+E+EQ VD+LR DLA+ T V Q ELA A +R+ L+E+L + + + SL+ +P SP + +PPPLP+R S Sbjct: 86 RITGPQPVDFEKKRQLETQRVHTFQLMLEKEQSYVDKLRSDLAKASTSSGNVNIVALQAELAGAERRVRTLQEQLAAITTNE---QLCSLVTNTSCSPGYYSPLSGSSGDVPPPLPSRKSLS 204 The following BLAST results are available for this feature:
BLAST of rho guanine nucleotide exchange factor 11-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of rho guanine nucleotide exchange factor 11-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of rho guanine nucleotide exchange factor 11-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold82_size396747:120156..127642- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold82_size396747-snap-gene-1.21 ID=maker-scaffold82_size396747-snap-gene-1.21|Name=rho guanine nucleotide exchange factor 11-like|organism=Tigriopus kingsejongensis|type=gene|length=7487bp|location=Sequence derived from alignment at scaffold82_size396747:120156..127642- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho guanine nucleotide exchange factor 11-like' has the following synonyms
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