lim homeobox protein lhx1-like, maker-scaffold865_size87005-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview
Namelim homeobox protein lhx1-like
Unique Namemaker-scaffold865_size87005-snap-gene-0.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000008243 (supercontig:LSalAtl2s:LSalAtl2s498:126445:127976:-1 gene:EMLSAG00000008243 transcript:EMLSAT00000008243 description:"maker-LSalAtl2s498-augustus-gene-1.8")

HSP 1 Score: 137.117 bits (344), Expect = 5.896e-38
Identity = 95/219 (43.38%), Postives = 117/219 (53.42%), Query Frame = 0 
Query:   77 DDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFPVPPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNSGGGPDFPGSEFPLGEMPPPNSNSSPEDDFNSSTGSANSNQNSVTPTGNGSGSN 295
            +D    KRRGPRTTIKAKQLEVLK+ F+ TPKPTRHIREQLAKETGL MRVIQVWFQN+RSKERR+KQMSN     R  + G+     F      +   P+  P+H          P   FFP+               M+QPLPM   P +  P G       N   G D    E  L  M    S S+ ED+  SST     + +S++P+ +G  +N
Sbjct:  150 EDEKKEKRRGPRTTIKAKQLEVLKSTFNSTPKPTRHIREQLAKETGLPMRVIQVWFQNRRSKERRLKQMSN-----RAKYFGRHKMNYF------YDNLPYPSPFH----------PNGEFFPLND-------------MEQPLPMSMNPSSVNPGG-------NYMCGVD--KVESLLDAMSEEQS-STLEDEEESSTNFL--SHHSLSPSTSGQNTN 322
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000008249 (supercontig:LSalAtl2s:LSalAtl2s498:40217:45202:1 gene:EMLSAG00000008249 transcript:EMLSAT00000008249 description:"maker-LSalAtl2s498-snap-gene-0.4")

HSP 1 Score: 124.405 bits (311), Expect = 6.482e-33
Identity = 70/100 (70.00%), Postives = 74/100 (74.00%), Query Frame = 0 
Query:   83 KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRG-FFPGKGGRRGFPLIGDDF-GYF--PHD 178
            KRRGPRTTIKAKQ EVLKT FSQTPKPTR +REQLAKETGL MRVIQVWFQNKRSKE+RM QM       RG F P    RRG P  G  + GY+  PHD
Sbjct:  187 KRRGPRTTIKAKQFEVLKTVFSQTPKPTRLMREQLAKETGLPMRVIQVWFQNKRSKEKRMHQMR---FMARGPFLPPNASRRGGP--GMRYPGYYPGPHD 281
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000003616 (supercontig:LSalAtl2s:LSalAtl2s19813:128:427:1 gene:EMLSAG00000003616 transcript:EMLSAT00000003616 description:"snap_masked-LSalAtl2s19813-processed-gene-0.1")

HSP 1 Score: 107.842 bits (268), Expect = 1.641e-29
Identity = 68/108 (62.96%), Postives = 72/108 (66.67%), Query Frame = 0 
Query:   24 METNNNSLSPEKALFGGGGGPDQLIKPELDNEDSMDGEGLDG--KGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQ 129
            ME NN+SL     L    GG      P  DN    D E +D   K C DS++   DD   GKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQ
Sbjct:    1 MENNNHSLG---LLLDPSGGDSLDYGPYKDN----DSESIDDGDKEC-DSKSLLDDDGPGGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLXMRVIQ 100
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000002055 (supercontig:LSalAtl2s:LSalAtl2s1373:69728:71167:-1 gene:EMLSAG00000002055 transcript:EMLSAT00000002055 description:"snap_masked-LSalAtl2s1373-processed-gene-0.14")

HSP 1 Score: 112.849 bits (281), Expect = 2.741e-29
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 0 
Query:   84 RRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQM 145
            RRGPRTTIK KQL+VLKTAF  TPKPTR +R+ LAKETGL MRVIQVWFQNKRSKE+RM QM
Sbjct:  155 RRGPRTTIKTKQLDVLKTAFDSTPKPTRSMRQALAKETGLPMRVIQVWFQNKRSKEKRMTQM 216
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000000794 (supercontig:LSalAtl2s:LSalAtl2s11338:317:1090:1 gene:EMLSAG00000000794 transcript:EMLSAT00000000794 description:"snap_masked-LSalAtl2s11338-processed-gene-0.1")

HSP 1 Score: 106.686 bits (265), Expect = 9.745e-28
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0 
Query:  130 VWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGY 186
            VWFQNKRSKERRMKQM++ MV GRGFFPGKGGRRGFPL+ D+FGYFPHDK +HDF Y
Sbjct:   10 VWFQNKRSKERRMKQMTSGMVPGRGFFPGKGGRRGFPLLSDEFGYFPHDKGFHDFSY 66
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000008242 (supercontig:LSalAtl2s:LSalAtl2s498:108992:109816:-1 gene:EMLSAG00000008242 transcript:EMLSAT00000008242 description:"augustus_masked-LSalAtl2s498-processed-gene-1.0")

HSP 1 Score: 103.219 bits (256), Expect = 8.642e-26
Identity = 70/161 (43.48%), Postives = 80/161 (49.69%), Query Frame = 0 
Query:   77 DDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFPVPPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPS 237
            DD   GKRRGPR TIK  QLE L+  F++ PKP R IRE LAK TGL+MRVIQVWFQNKRSKE+R+  M                 R +P  G  F Y+                   DG  P P  PM Y    V PH  Q       PMN+  + PPPS
Sbjct:  156 DDDKRGKRRGPRXTIKPPQLEKLQEIFNRNPKPNRAIRENLAKNTGLAMRVIQVWFQNKRSKEKRLTSM-----------------RMYPHYG-QFSYY------------------SDGLLPSP--PMEYPSEYVQPHAIQ-------PMNT--ITPPPS 269
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000010483 (supercontig:LSalAtl2s:LSalAtl2s696:31985:42695:-1 gene:EMLSAG00000010483 transcript:EMLSAT00000010483 description:"maker-LSalAtl2s696-augustus-gene-0.26")

HSP 1 Score: 87.8113 bits (216), Expect = 6.743e-20
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:   74 KSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNK 135
            +S  +S  G +R PRTTI A Q+EVLK A+  +PKP RHIREQLA++TGL MRV+QVWFQN+
Sbjct:  147 ESARNSVDGNKR-PRTTITAXQMEVLKEAYKNSPKPARHIREQLAQDTGLDMRVVQVWFQNR 207
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000006341 (supercontig:LSalAtl2s:LSalAtl2s346:279696:285335:-1 gene:EMLSAG00000006341 transcript:EMLSAT00000006341 description:"maker-LSalAtl2s346-augustus-gene-3.11")

HSP 1 Score: 75.8702 bits (185), Expect = 1.244e-15
Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:   84 RRGP---RTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQ 144
            RRGP   RT + A Q    K +F  +PKP R +RE LAK+TGLS+RV+QVWFQN+R+K +++++
Sbjct:  230 RRGPKRPRTILTAAQRRQFKASFEISPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 293
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000004956 (supercontig:LSalAtl2s:LSalAtl2s260:1196109:1202410:1 gene:EMLSAG00000004956 transcript:EMLSAT00000004956 description:"maker-LSalAtl2s260-augustus-gene-12.10")

HSP 1 Score: 72.0182 bits (175), Expect = 3.494e-14
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0 
Query:   80 AAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRM------KQMSNSMVAGRGFFPGKGGRRGFPLIG 169
            A  K    RT +  KQL +LKT +S  P+P   ++EQL + T LS RVI+VWFQNKR K++++      KQM      GR    G G   G P++ 
Sbjct:  273 ADRKSARARTVLSEKQLNILKTCYSANPRPDALMKEQLVEMTALSPRVIRVWFQNKRCKDKKIQNRLLEKQMQRES-DGRKL--GYGNMHGIPMVA 365
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BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Match: EMLSAG00000005359 (supercontig:LSalAtl2s:LSalAtl2s289:230955:236378:-1 gene:EMLSAG00000005359 transcript:EMLSAT00000005359 description:"maker-LSalAtl2s289-augustus-gene-2.27")

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-13
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:   84 RRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRM-KQMSNSMVAG 152
            RR  RTT   +QL+ L+TAFS++  P  + RE+LA+ T L+   IQVWFQN+R+K R+  KQ+  ++ A 
Sbjct:   87 RRRHRTTFTQEQLQELETAFSKSHYPDIYCREELARSTKLNEARIQVWFQNRRAKXRKQEKQLQKALXAS 156
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BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|2506818|sp|P20154.2|LIN11_CAEEL (RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage protein 11)

HSP 1 Score: 145.206 bits (365), Expect = 6.791e-39
Identity = 99/208 (47.60%), Postives = 113/208 (54.33%), Query Frame = 0 
Query:   51 ELDNEDSMDGEGLD-GKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLIGDDFGYFPHDKPYHDFGYPPNFVPPPDG--FFPVPPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNSGGGPDFPGSEFPL 255
            E DN D+ D  GLD G+G  D    + DDS + KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA ETGL+MRVIQVWFQN+RSKERRMKQ+         F   +  RR  P   D    FP+D+ +    YPP   PPP    FF  P     Y      P   Q  P    P  +  M P P  T  S   P+F    F  
Sbjct:  209 EEDNVDACDEVGLDDGEG--DCGKDNSDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQLR--------FGGYRQSRR--PRRDDIVDMFPNDQQF----YPP---PPPSNVQFFCDP-----YTTSPNNPETIQMAPQFAVPTENMNMVPEP-YTEQSATPPEFNEDTFAC 391
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BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|60416412|sp|P48742.2|LHX1_HUMAN (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1)

HSP 1 Score: 141.739 bits (356), Expect = 1.660e-37
Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 0 
Query:   27 NNNSLSPEKALFGGGGGPDQLIKPELDN---EDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
            +N+S++ E +L     G D  + P+  +   +D+ D E  +    E   N++ D +   KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL+
Sbjct:  120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLV 262
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BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|1708826|sp|P53411.1|LHX1_CHICK (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1)

HSP 1 Score: 141.354 bits (355), Expect = 2.287e-37
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 0 
Query:   27 NNNSLSPEKALFGGGGGPDQLIKPELDN---EDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
            NN++ + E +L     G D  + P+  +   +D+ D E  +    E   N++ D +   KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL+
Sbjct:  120 NNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLV 262
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BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|51702761|sp|P63007.1|LHX1_RAT (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=Rlim >gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1 >gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein LMX-2; AltName: Full=Homeobox protein Lim-1)

HSP 1 Score: 140.969 bits (354), Expect = 2.671e-37
Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 0 
Query:   27 NNNSLSPEKALFGGGGGPDQLIKPELDN---EDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
            +N+S++ E +L     G D  + P+  +   +D+ D E  +    E   N++ D +   KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL+
Sbjct:  120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLV 262
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|60389888|sp|Q5IS44.1|LHX1_PANTR (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1 >gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1)

HSP 1 Score: 140.969 bits (354), Expect = 2.671e-37
Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 0 
Query:   27 NNNSLSPEKALFGGGGGPDQLIKPELDN---EDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
            +N+S++ E +L     G D  + P+  +   +D+ D E  +    E   N++ D +   KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL+
Sbjct:  120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLV 262
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|267419|sp|P29674.1|LHX1_XENLA (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1; Short=x-Lhx1; Short=xLIM-1)

HSP 1 Score: 138.658 bits (348), Expect = 2.168e-36
Identity = 77/145 (53.10%), Postives = 95/145 (65.52%), Query Frame = 0 
Query:   27 NNNSLSPEKALFGGGGGPDQLIKPELDN---EDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
            NNN+ + E + F    G D  + PE  +   +D+ D E  +    E   N++ D +   KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL+
Sbjct:  120 NNNNAAKENS-FISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAGINENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLV 261
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|2497670|sp|Q90476.1|LHX1_DANRE (RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein 1; AltName: Full=Homeobox protein Lim-1)

HSP 1 Score: 133.265 bits (334), Expect = 2.051e-34
Identity = 68/115 (59.13%), Postives = 80/115 (69.57%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLI 168
             +D  D E  +    E   N++ D +  GKRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR   L+
Sbjct:  149 QDDVKDAEIANLSDKETGNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRTLV 261
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5)

HSP 1 Score: 132.494 bits (332), Expect = 3.919e-34
Identity = 72/137 (52.55%), Postives = 89/137 (64.96%), Query Frame = 0 
Query:   34 EKALFGGGGGPDQLIKPELDNEDSMDGEGLDGKGCEDSE---NKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPL 167
            E +L       D+ + P+L +    D +  D     D E   N++ + ++  KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL
Sbjct:  127 EGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPL 261
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|47606426|sp|P61376.1|LHX5_RAT (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5; AltName: Full=Homeobox protein LIM-2 >gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5)

HSP 1 Score: 131.339 bits (329), Expect = 9.269e-34
Identity = 79/165 (47.88%), Postives = 99/165 (60.00%), Query Frame = 0 
Query:   34 EKALFGGGGGPDQLIKPELDNEDSMDGEGLDGKGCEDSE---NKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPLIGD-DFGYFPHDKPYHDFG-YPPNFVPP 193
            E +L       D+ + P+L +    D +  D     D E   N++ + ++  KRRGPRTTIKAKQLE LK AF+ TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL G  D        PY  +G Y  ++  P
Sbjct:  127 EGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAP 289
[Close]
BLAST of lim homeobox protein lhx1-like vs. SwissProt
Match: gi|1708831|sp|P37137.2|LHX5_XENLA (RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein 5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5; AltName: Full=xLIM-2A)

HSP 1 Score: 130.568 bits (327), Expect = 1.731e-33
Identity = 70/137 (51.09%), Postives = 88/137 (64.23%), Query Frame = 0 
Query:   34 EKALFGGGGGPDQLIKPELDNEDSMDGEGLDGKGCEDSE---NKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRGFFPGKGGRRGFPL 167
            E +L       D+ + P++ +    + +  D     D E   N++ + ++  KRRGPRTTIKAKQLE LK AF  TPKPTRHIREQLA+ETGL+MRVIQVWFQN+RSKERRMKQ+S        FF  +  RR  PL
Sbjct:  127 ESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFF--RSPRRMRPL 261
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|1279724255|ref|XP_022906778.1| (LIM/homeobox protein Lhx1, partial [Onthophagus taurus])

HSP 1 Score: 167.548 bits (423), Expect = 4.579e-45
Identity = 135/274 (49.27%), Postives = 153/274 (55.84%), Query Frame = 0 
Query:   11 PLHSPYPPLPHIKMETNNNSLSPEKALFGGGGGPDQLIKPELDNEDSMDGEGLDGKG-CEDS--ENKSPDDSAAG-KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRG-FFPGKGGRRGFPLI-----GDD----FGYFPHDKPYHDFGYP-----PNFVPPPDGFFP-----VPPGPMGYMGPGVGPHMDQPLPMHGG----PMNSGPM-----GPPPSMTPNSGGGPDFPGS 251
            PLH   PP P    E NNNSLS   +  G   G D     +   +DS D   LDG     DS  ENKSPDDS+AG KRRGPRTTIKAKQLE+LKTAF QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERR+KQ+++    GRG FF      RGF +       DD    FG++P  K   +FGYP     P+  PP   FFP      P  PM +  PG       P+PM G     P   G       GP   M    GG P+F G+
Sbjct:  101 PLHGSLPPAPS---EANNNSLS--HSDLGSSIGQDS----KTGQDDSEDQNSLDGDAETRDSQTENKSPDDSSAGSKRRGPRTTIKAKQLEILKTAFGQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRLKQLTS---MGRGPFFGSSRKMRGFAMNLSPGGMDDGPPGFGFYPDGK--FEFGYPGGPFHPHDTPP---FFPGHHPGAPGQPMPFSTPGGPLDHGGPMPMSGDFGSLPNEQGQFMPQQPGPDQMMQGGRGGSPEFIGA 357
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|1135100854|ref|XP_019890757.1| (PREDICTED: LIM/homeobox protein Lhx1 isoform X1 [Musca domestica])

HSP 1 Score: 169.474 bits (428), Expect = 7.249e-45
Identity = 109/205 (53.17%), Postives = 133/205 (64.88%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL-------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQPLPMHGGPM---NSGPMGPPPSMTPNSGGGP 246
            ++ S+DG+  D +G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+        G  F YF  +  + +FGY P+F P    FFP  P GPM +  P + P +  P+  H GP+   N   + P  +    + GGP
Sbjct:  220 DQGSLDGDP-DARGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGMDDGPGFPYFAAEGKF-EFGYGPHFHPHDGPFFPGHPGGPMPFNAPAIVPFVGGPMD-HTGPIPMVNEFGLTPDSNFLSQTAGGP 418
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|1108474210|emb|CRK98066.1| (CLUMA_CG011435, isoform A [Clunio marinus])

HSP 1 Score: 167.548 bits (423), Expect = 1.499e-44
Identity = 132/252 (52.38%), Postives = 147/252 (58.33%), Query Frame = 0 
Query:   46 QLIKPELDNEDSMDGEGLDG----KGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGRG-FFPGKGGRRGFPLI----GDD---FGYFPHDKPYHDFGY--PPNFVPPPDGFFPVPPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNSGGGPDFPGSEFPLGEMPPPNSNSSPEDDFNSSTGSANSNQN 283
            Q +  +  N D  D   LDG    +G   SENKSP+D A  KRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERR+KQ+++    GRG FF G    RGFP+     G D   F YF  DK   DFGY  PP F P    FFP  PG M +  PG GP MD P  M  G +N   M P  S      G P   G+        P   + SPE   N+   S +SN N
Sbjct:  198 QSMSTDSKNNDDSDQGSLDGDPDARGDSQSENKSPEDGAGSKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRLKQLTS---MGRGPFFGGSRKMRGFPMNLSPGGLDEPGFPYFASDK--FDFGYGGPP-FHPHESPFFPGHPG-MPFNAPG-GP-MDHPGSM-PGMVNEFSMTPEASFLNQPNGPPITGGAN-------PSERSGSPEFMSNAGNFSESSNIN 432
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|907735339|ref|XP_013115386.1| (PREDICTED: LIM/homeobox protein Lhx1 isoform X1 [Stomoxys calcitrans])

HSP 1 Score: 168.703 bits (426), Expect = 1.563e-44
Identity = 109/198 (55.05%), Postives = 131/198 (66.16%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL-------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQPLPMHGGPMNSGPMGPPPSMTPNS 242
            ++ S+DG+  D +G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+        G  F YF  +  + +FGY P+F P    FFP  P GPM +  P + P +  P+  H GP+   PM     +TP S
Sbjct:  220 DQGSLDGDP-DARGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGMDDGPGFPYFAAEGKF-EFGYGPHFHPHDGPFFPGHPGGPMPFNAPAIVPFVGGPMD-HTGPI---PMVNEFGLTPES 408
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|1060285158|ref|XP_017853305.1| (PREDICTED: LIM/homeobox protein Lhx1 [Drosophila busckii])

HSP 1 Score: 164.851 bits (416), Expect = 2.347e-44
Identity = 108/181 (59.67%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL--------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPM 222
            ++ S+DG+  DG+G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+         G  F YF  D  + +FGY   F P    FFP  P GPM +  PG GP MD   P+PM
Sbjct:   60 DQGSLDGDP-DGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKF-EFGYGGPFHPHDGPFFPGHPGGPMPFNAPG-GP-MDHSGPIPM 233
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|1062692442|ref|XP_017965745.1| (PREDICTED: LIM/homeobox protein Lhx1 [Drosophila navojoa])

HSP 1 Score: 164.851 bits (416), Expect = 2.362e-44
Identity = 108/181 (59.67%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL--------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPM 222
            ++ S+DG+  DG+G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+         G  F YF  D  + +FGY   F P    FFP  P GPM +  PG GP MD   P+PM
Sbjct:   60 DQGSLDGDP-DGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKF-EFGYGGPFHPHDGPFFPGHPGGPMPFNAPG-GP-MDHSGPIPM 233
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|968091829|ref|XP_015024572.1| (uncharacterized protein Dvir_GJ15180, isoform B [Drosophila virilis] >gi|946558835|gb|KRF78152.1| uncharacterized protein Dvir_GJ15180, isoform B [Drosophila virilis])

HSP 1 Score: 164.851 bits (416), Expect = 2.800e-44
Identity = 108/181 (59.67%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL--------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPM 222
            ++ S+DG+  DG+G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+         G  F YF  D  + +FGY   F P    FFP  P GPM +  PG GP MD   P+PM
Sbjct:   80 DQGSLDGDP-DGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKF-EFGYGGPFHPHDGPFFPGHPGGPMPFNAPG-GP-MDHSGPIPM 253
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|557758459|ref|XP_005178957.1| (PREDICTED: LIM/homeobox protein Lhx1 isoform X2 [Musca domestica])

HSP 1 Score: 167.548 bits (423), Expect = 3.894e-44
Identity = 112/204 (54.90%), Postives = 134/204 (65.69%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL-------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPMHGGPMNSGPMGPPPSMTPNSGGGP 246
            ++ S+DG+  D +G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+        G  F YF  +  + +FGY P+F P    FFP  P GPM +  PG GP MD   P+PM    +N   + P  +    + GGP
Sbjct:  220 DQGSLDGDP-DARGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGMDDGPGFPYFAAEGKF-EFGYGPHFHPHDGPFFPGHPGGPMPFNAPG-GP-MDHTGPIPM----VNEFGLTPDSNFLSQTAGGP 412
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|969507453|ref|XP_015041855.1| (uncharacterized protein Dpse_GA10943, isoform B [Drosophila pseudoobscura pseudoobscura] >gi|950777409|gb|KRT06792.1| uncharacterized protein Dpse_GA10943, isoform B [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 163.696 bits (413), Expect = 5.484e-44
Identity = 107/181 (59.12%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL--------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPM 222
            ++ S+DG+  DG+G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+         G  F YF  D  + +FGY   F P    +FP  P GPM +  PG GP MD   P+PM
Sbjct:   60 DQGSLDGDP-DGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKF-EFGYGGPFHPHDGPYFPGHPGGPMPFNAPG-GP-MDHSGPIPM 233
[Close]
BLAST of lim homeobox protein lhx1-like vs. nr
Match: gi|969507457|ref|XP_015041856.1| (uncharacterized protein Dpse_GA10943, isoform D [Drosophila pseudoobscura pseudoobscura] >gi|950777411|gb|KRT06793.1| uncharacterized protein Dpse_GA10943, isoform D [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 163.696 bits (413), Expect = 6.996e-44
Identity = 107/181 (59.12%), Postives = 124/181 (68.51%), Query Frame = 0 
Query:   54 NEDSMDGEGLDGKGCEDSENKSPDDSAAGKRRGPRTTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLSMRVIQVWFQNKRSKERRMKQMSNSMVAGR-GFFPGKGGRRGFPL--------IGDDFGYFPHDKPYHDFGYPPNFVPPPDGFFP-VPPGPMGYMGPGVGPHMDQ--PLPM 222
            ++ S+DG+  DG+G   +ENKSPDD+   KRRGPRTTIKAKQLEVLKTAF+QTPKPTRHIREQLAKETGL MRVIQVWFQNKRSKERRMKQ+++    GR  FF G    RGFP+         G  F YF  D  + +FGY   F P    +FP  P GPM +  PG GP MD   P+PM
Sbjct:   75 DQGSLDGDP-DGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITS---MGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKF-EFGYGGPFHPHDGPYFPGHPGGPMPFNAPG-GP-MDHSGPIPM 248
The following BLAST results are available for this feature:
BLAST of lim homeobox protein lhx1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000082435.896e-3843.38supercontig:LSalAtl2s:LSalAtl2s498:126445:127976:-... [more]
EMLSAG000000082496.482e-3370.00supercontig:LSalAtl2s:LSalAtl2s498:40217:45202:1 g... [more]
EMLSAG000000036161.641e-2962.96supercontig:LSalAtl2s:LSalAtl2s19813:128:427:1 gen... [more]
EMLSAG000000020552.741e-2982.26supercontig:LSalAtl2s:LSalAtl2s1373:69728:71167:-1... [more]
EMLSAG000000007949.745e-2882.46supercontig:LSalAtl2s:LSalAtl2s11338:317:1090:1 ge... [more]
EMLSAG000000082428.642e-2643.48supercontig:LSalAtl2s:LSalAtl2s498:108992:109816:-... [more]
EMLSAG000000104836.743e-2062.90supercontig:LSalAtl2s:LSalAtl2s696:31985:42695:-1 ... [more]
EMLSAG000000063411.244e-1551.56supercontig:LSalAtl2s:LSalAtl2s346:279696:285335:-... [more]
EMLSAG000000049563.494e-1440.63supercontig:LSalAtl2s:LSalAtl2s260:1196109:1202410... [more]
EMLSAG000000053591.091e-1345.71supercontig:LSalAtl2s:LSalAtl2s289:230955:236378:-... [more]

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BLAST of lim homeobox protein lhx1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|2506818|sp|P20154.2|LIN11_CAEEL6.791e-3947.60RecName: Full=Protein lin-11; AltName: Full=Abnorm... [more]
gi|60416412|sp|P48742.2|LHX1_HUMAN1.660e-3751.72RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|1708826|sp|P53411.1|LHX1_CHICK2.287e-3751.72RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|51702761|sp|P63007.1|LHX1_RAT2.671e-3751.72RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR2.671e-3751.72RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|267419|sp|P29674.1|LHX1_XENLA2.168e-3653.10RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|2497670|sp|Q90476.1|LHX1_DANRE2.051e-3459.13RecName: Full=LIM/homeobox protein Lhx1; Short=LIM... [more]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN3.919e-3452.55RecName: Full=LIM/homeobox protein Lhx5; Short=LIM... [more]
gi|47606426|sp|P61376.1|LHX5_RAT9.269e-3447.88RecName: Full=LIM/homeobox protein Lhx5; Short=LIM... [more]
gi|1708831|sp|P37137.2|LHX5_XENLA1.731e-3351.09RecName: Full=LIM/homeobox protein Lhx5; Short=LIM... [more]

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BLAST of lim homeobox protein lhx1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1279724255|ref|XP_022906778.1|4.579e-4549.27LIM/homeobox protein Lhx1, partial [Onthophagus ta... [more]
gi|1135100854|ref|XP_019890757.1|7.249e-4553.17PREDICTED: LIM/homeobox protein Lhx1 isoform X1 [M... [more]
gi|1108474210|emb|CRK98066.1|1.499e-4452.38CLUMA_CG011435, isoform A [Clunio marinus][more]
gi|907735339|ref|XP_013115386.1|1.563e-4455.05PREDICTED: LIM/homeobox protein Lhx1 isoform X1 [S... [more]
gi|1060285158|ref|XP_017853305.1|2.347e-4459.67PREDICTED: LIM/homeobox protein Lhx1 [Drosophila b... [more]
gi|1062692442|ref|XP_017965745.1|2.362e-4459.67PREDICTED: LIM/homeobox protein Lhx1 [Drosophila n... [more]
gi|968091829|ref|XP_015024572.1|2.800e-4459.67uncharacterized protein Dvir_GJ15180, isoform B [D... [more]
gi|557758459|ref|XP_005178957.1|3.894e-4454.90PREDICTED: LIM/homeobox protein Lhx1 isoform X2 [M... [more]
gi|969507453|ref|XP_015041855.1|5.484e-4459.12uncharacterized protein Dpse_GA10943, isoform B [D... [more]
gi|969507457|ref|XP_015041856.1|6.996e-4459.12uncharacterized protein Dpse_GA10943, isoform D [D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold865_size87005supercontigscaffold865_size87005:12576..13863 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold865_size87005-snap-gene-0.17-mRNA-1maker-scaffold865_size87005-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold865_size87005:12576..13863-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold865_size87005-snap-gene-0.17 ID=maker-scaffold865_size87005-snap-gene-0.17|Name=lim homeobox protein lhx1-like|organism=Tigriopus kingsejongensis|type=gene|length=1288bp|location=Sequence derived from alignment at scaffold865_size87005:12576..13863- (Tigriopus kingsejongensis)
ATTCTCTCTTCTCGGACGAGGACGAAGAGATCGAGGACCAAGTGCCGATT
CCCGGCATCGGAGATCCATCGACCCACCTCCCGCCCCCTACTCTGCCGAC
CCCGGGTGGACACATGATGGATCCCCTCCATTCACCGTACCCTCCGCTGC
CCCACATCAAAATGGAGACCAACAACAACTCACTCAGTCCGGAGAAGGCC
CTATTTGGTGGAGGTGGAGGACCCGACCAACTCATCAAGCCTGAGCTGGA
CAATGAGGACTCCATGGATGGGGAGGGTCTGGACGGCAAGGGTTGCGAGG
ACAGCGAAAACAAGAGTCCAGATGACTCGGCCGCAGGCAAGCGGCGAGGT
CCAAGGACGACAATTAAAGCCAAACAGCTGGAGGTCCTCAAGACAGCATT
TTCACAAACACCAAAACCCACACGCCACATACGTGAGCAATTGGCCAAGG
AGACGGGACTCAGTATGCGGGTGATACAGGTACGCAGGGCTCCACCTCAC
GCTGAGCCGATAATTGGCGCCTCAAGTCTGCCTCGACCTGAGCAATTACA
GTCGGTGAGCTTGATTTTCTCTCTCGTCCTTCAGGTGTGGTTCCAGAACA
AGCGGAGCAAAGAGCGGAGGATGAAGCAGATGAGCAACAGTATGGTGGCG
GGTCGAGGATTCTTCCCGGGCAAGGGAGGCCGTCGAGGCTTCCCTCTGAT
CGGGGACGACTTTGGGTACTTTCCACACGACAAGCCCTACCACGACTTTG
GGTATCCGCCCAATTTCGTCCCTCCACCTGACGGCTTCTTCCCCGTCCCA
CCGGGTCCCATGGGCTACATGGGTCCGGGTGTCGGGCCCCACATGGACCA
ACCCCTGCCCATGCACGGTGGCCCCATGAACAGTGGACCCATGGGCCCTC
CTCCCTCCATGACCCCAAACTCAGGGGGGGGCCCGGATTTTCCGGGCTCG
GAATTCCCCTTAGGGGAAATGCCGCCCCCCAACAGCAACTCTAGTCCCGA
GGACGACTTCAACTCTAGCACAGGTAAGCCATTCTAGGGGCGAGCGCCTC
AAGTGGTCCCTACTTCCAGCGGCTAATCACCCTTTTTGCTATCTTAGGAT
CGGCAAACTCCAACCAGAACAGTGTGACCCCCACCGGCAATGGGAGTGGT
AGCAACCCTGTGGGAGGTGGCGTCCTCAATGGTCCCAATTCTGGTGGCAA
TGGCAACAACAATGGTAGTAGTAATGGGAGCTTTTCCTCACCTTCCCACA
ACGGCGTCGGGGGCTCCGGGGATGAGCAGATGGTTTGG
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Synonyms
The feature 'lim homeobox protein lhx1-like' has the following synonyms
Synonym
Tk05472
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