laminin subunit beta-1-like, maker-scaffold895_size84271-snap-gene-0.37 (gene) Tigriopus kingsejongensis

Overview


Name	laminin subunit beta-1-like
Unique Name	maker-scaffold895_size84271-snap-gene-0.37
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of laminin subunit beta-1-like vs. L. salmonis genes
Match: EMLSAG00000012769 (supercontig:LSalAtl2s:LSalAtl2s96:259137:268445:-1 gene:EMLSAG00000012769 transcript:EMLSAT00000012769 description:"maker-LSalAtl2s96-snap-gene-2.8")

HSP 1 Score: 273.092 bits (697), Expect = 3.516e-85
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0

Query:    6 LVTTLLALGLVALS-ESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEY---SRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            ++T L+   L  +  + YTP++RGC++RSCYPATGNLLIGRQDKL A STCG  R+ERYC+LS L+    S   Q CFWCDSTEQG  SNPRTSH I NIVYRM   +   S  + TWWQA+NG E  TIQLDLEAEFHVTHLI+TFKTFRPAAMYIEKSYDWG TWKIHRYFA +C  SFPG+  G P+YLNET
Sbjct:    9 VLTILIICNLFLIEVKGYTPLARGCDQRSCYPATGNLLIGRQDKLTANSTCGSGRRERYCVLSLLDNTSPSNSRQNCFWCDSTEQGTYSNPRTSHNINNIVYRMGRDQGGNS--FPTWWQARNGEEYVTIQLDLEAEFHVTHLIMTFKTFRPAAMYIEKSYDWGTTWKIHRYFAADCESSFPGVPVGVPKYLNET 201

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BLAST of laminin subunit beta-1-like vs. L. salmonis genes
Match: EMLSAG00000010003 (supercontig:LSalAtl2s:LSalAtl2s656:177518:206284:1 gene:EMLSAG00000010003 transcript:EMLSAT00000010003 description:"maker-LSalAtl2s656-snap-gene-2.9")

HSP 1 Score: 53.1434 bits (126), Expect = 1.209e-8
Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 0

Query:   35 YPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQA---QNGIEN--ATIQLDLEAEFHVTHLIITFK-TFRPAAMYIEKSYDWGQTWKIHRYFA 175
            +P+  NL  G    + + +TCG   +E YC L  L  +   ++C  CD+ ++                 +  P E A      TWWQA   Q G+E+  ATI +DL+  F V +++IT   + RP    +E+S D G+ W   ++FA
Sbjct:   32 FPSVFNLAEGAD--IFSNTTCGASEQEIYCKL--LSETSSARQCGICDAAKKD----------------KNHPIEFAIDGNENTWWQASSLQTGLESNYATITVDLKEVFQVAYVLITTGISPRPGNWLLERSID-GKIWAPWQFFA 157

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|160232264|sp|P11046.4|LAMB1_DROME (RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain; Flags: Precursor)

HSP 1 Score: 212.616 bits (540), Expect = 1.237e-62
Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGI 185
            CE  SCYPATGNLLIGR+++L A+STCGL   ER+CILSHL+    D+KCF CD+ E+    +P  +HRI  I+Y+ +P    P     TWWQ++NG ENATIQLDLEAEFH THLIITF TFRPAAMYIE+S+D+GQTW I+RYFAY+C +SFPG+
Sbjct:   49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQ----DKKCFLCDTREE-TKHDPYKNHRIGQIIYKTKPGTNIP-----TWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGV 195

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|317373377|sp|P07942.2|LAMB1_HUMAN (RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain; AltName: Full=Laminin-1 subunit beta; AltName: Full=Laminin-10 subunit beta; AltName: Full=Laminin-12 subunit beta; AltName: Full=Laminin-2 subunit beta; AltName: Full=Laminin-6 subunit beta; AltName: Full=Laminin-8 subunit beta; Flags: Precursor)

HSP 1 Score: 201.445 bits (511), Expect = 1.108e-58
Identity = 100/194 (51.55%), Postives = 128/194 (65.98%), Query Frame = 0

Query:    2 MKQHLVTTLLALGLVALSESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNE 195
            + Q L  + LAL    +       S GC E SCYPATG+LLIGR  KL  TSTCGL + E YCI+SHL+    D+KCF C+S +    +    SH IEN+V    P       + + WWQ++NG+EN TIQLDLEAEFH THLI+TFKTFRPAAM IE+S D+G+TW ++RYFAY+C  SFPGI  G  + +++
Sbjct:    3 LLQLLAFSFLALCRARVRAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQ---EDKKCFICNSQDPYHETLNPDSHLIENVVTTFAP------NRLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEASFPGISTGPMKKVDD 187

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|341941025|sp|P02469.3|LAMB1_MOUSE (RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain; AltName: Full=Laminin-1 subunit beta; AltName: Full=Laminin-10 subunit beta; AltName: Full=Laminin-12 subunit beta; AltName: Full=Laminin-2 subunit beta; AltName: Full=Laminin-6 subunit beta; AltName: Full=Laminin-8 subunit beta; Flags: Precursor)

HSP 1 Score: 199.134 bits (505), Expect = 6.569e-58
Identity = 99/191 (51.83%), Postives = 126/191 (65.97%), Query Frame = 0

Query:   10 LLALGLVAL-----SESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNE 195
            + A G++AL            S GC E SCYPATG+LLIGR  KL  TSTCGL + E YCI+SHL+    D+KCF CDS +    +    SH IEN+V    P       + + WWQ++NG+EN TIQLDLEAEFH THLI+TFKTFRPAAM IE+S D+G+ W ++RYFAY+C  SFPGI  G  + +++
Sbjct:    6 VFAFGVLALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQ---EDKKCFICDSRDPYHETLNPDSHLIENVVTTFAP------NRLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTGPMKKVDD 187

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|156630892|sp|P55268.2|LAMB2_HUMAN (RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin B1s chain; AltName: Full=Laminin-11 subunit beta; AltName: Full=Laminin-14 subunit beta; AltName: Full=Laminin-15 subunit beta; AltName: Full=Laminin-3 subunit beta; AltName: Full=Laminin-4 subunit beta; AltName: Full=Laminin-7 subunit beta; AltName: Full=Laminin-9 subunit beta; AltName: Full=S-laminin subunit beta; Short=S-LAM beta; Flags: Precursor)

HSP 1 Score: 195.282 bits (495), Expect = 1.645e-56
Identity = 91/179 (50.84%), Postives = 122/179 (68.16%), Query Frame = 0

Query:   18 LSESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            L+++  P   GC   SCYPATG+LL+GR D+L A+STCGL   + YCI+SHL+    ++KCF CDS     A +   SHRI+N+V    P      Q+   WWQ++NGI   TIQLDLEAEFH THLI+TFKTFRPAAM +E+S D+G+TW ++RYF+Y+C   FPG+    PR+ ++ 
Sbjct:   31 LAQAPAPDVPGCSRGSCYPATGDLLVGRADRLTASSTCGLNGPQPYCIVSHLQ---DEKKCFLCDSRRPFSARDNPHSHRIQNVVTSFAP------QRRAAWWQSENGIPAVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHVYRYFSYDCGADFPGVPLAPPRHWDDV 200

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|126371|sp|P15800.1|LAMB2_RAT (RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin chain B3; AltName: Full=Laminin-11 subunit beta; AltName: Full=Laminin-14 subunit beta; AltName: Full=Laminin-15 subunit beta; AltName: Full=Laminin-3 subunit beta; AltName: Full=Laminin-4 subunit beta; AltName: Full=Laminin-7 subunit beta; AltName: Full=Laminin-9 subunit beta; AltName: Full=S-laminin subunit beta; Short=S-LAM beta; Flags: Precursor)

HSP 1 Score: 192.586 bits (488), Expect = 1.194e-55
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0

Query:   28 GCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            GC   SCYPATG+LL+GR D+L A+STCGL   + YCI+SHL+    ++KCF CDS     A +   SHRI+N+V    P      Q+   WWQ++NG+   TIQLDLEAEFH THLI+TFKTFRPAAM +E+S D+G+TW+++RYF+Y+C   FPGI    PR  ++ 
Sbjct:   44 GCSRGSCYPATGDLLVGRADRLTASSTCGLHSPQPYCIVSHLQ---DEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAP------QRRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWRVYRYFSYDCGADFPGIPLAPPRRWDDV 203

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|341940890|sp|Q61292.2|LAMB2_MOUSE (RecName: Full=Laminin subunit beta-2; AltName: Full=Laminin-11 subunit beta; AltName: Full=Laminin-14 subunit beta; AltName: Full=Laminin-15 subunit beta; AltName: Full=Laminin-3 subunit beta; AltName: Full=Laminin-4 subunit beta; AltName: Full=Laminin-7 subunit beta; AltName: Full=Laminin-9 subunit beta; AltName: Full=S-laminin subunit beta; Short=S-LAM beta; Flags: Precursor)

HSP 1 Score: 191.43 bits (485), Expect = 3.202e-55
Identity = 89/169 (52.66%), Postives = 116/169 (68.64%), Query Frame = 0

Query:   28 GCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            GC   SCYPATG+LL+GR D+L A+STCGL   + YCI+SHL+    ++KCF CDS     A +   SHRI+N+V    P      Q+   WWQ++NG+   TIQLDLEAEFH THLI+TFKTFRPAAM +E+S D+G+TW ++RYF+Y+C   FPGI    PR  ++ 
Sbjct:   44 GCSRGSCYPATGDLLVGRADRLTASSTCGLHSPQPYCIVSHLQ---DEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAP------QRRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHVYRYFSYDCGADFPGIPLAPPRRWDDV 203

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|162416049|sp|A4D0S4.1|LAMB4_HUMAN (RecName: Full=Laminin subunit beta-4; AltName: Full=Laminin beta-1-related protein; Flags: Precursor)

HSP 1 Score: 174.866 bits (442), Expect = 2.280e-49
Identity = 86/185 (46.49%), Postives = 122/185 (65.95%), Query Frame = 0

Query:    4 QHLVTTLLALGLVALSESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEG 188
            Q  +T  L LG ++ S++    +RG    +C+P TG+LL+GR  +L A+STCGL R ++YCILS+LE    +QKCF CDS       +   SH IEN++   EP       + + WWQ++NG+++ +I+LDLEA F  +HLI+TFKTFRPAAM +E+S D+G  WK+ +YFA +CA SFP I  G
Sbjct:    2 QFQLTLFLHLGWLSYSKAQDDCNRG----ACHPTTGDLLVGRNTQLMASSTCGLSRAQKYCILSYLE---GEQKCFICDSRFPYDPYDQPNSHTIENVIVSFEP------DREKKWWQSENGLDHVSIRLDLEALFRFSHLILTFKTFRPAAMLVERSTDYGHNWKVFKYFAKDCATSFPNITSG 173

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|82243519|sp|Q8JHV6.1|LAMB4_DANRE (RecName: Full=Laminin subunit beta-4; Flags: Precursor)

HSP 1 Score: 174.866 bits (442), Expect = 2.331e-49
Identity = 82/167 (49.10%), Postives = 112/167 (67.07%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNE 195
            C   SCYP  G+L++GR  +L A+STCGL R + YCIL +LE  R   KCF CDS       +  +SHRIENI+   +P      ++   WWQ++NG+   +IQLDLEA F  +HLI+TFK+FRPA+M +E+S D+G+TWK+ RYFA +CA SFPGI EG    +++
Sbjct:   25 CVGNSCYPNLGDLMVGRAAQLAASSTCGLYRPQNYCILGYLENER---KCFTCDSRSPYNDYHNPSSHRIENIITTFQP------ERKMKWWQSENGVHEVSIQLDLEAMFQFSHLILTFKSFRPASMLVERSKDFGRTWKVFRYFAEDCANSFPGISEGPAHSIDD 182

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|2497595|sp|Q01636.1|LAMBV_CHICK (RecName: Full=Laminin subunit beta-1 variant; AltName: Full=Laminin beta-1-2 chain)

HSP 1 Score: 145.976 bits (367), Expect = 3.534e-43
Identity = 70/127 (55.12%), Postives = 89/127 (70.08%), Query Frame = 0

Query:   28 GCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPA 154
            GC   SCYPATG+LL+GR  +L A+STCGL R + YCI+SHL+    ++KCF CDS     A +   SHRIEN++    P      +  + WWQA+NG+E+ +IQLDLEAEFH THLI+TFKTFRPA
Sbjct:   81 GCAAGSCYPATGDLLVGRAPRLSASSTCGLRRPQPYCIVSHLQ---EEKKCFICDSRRPYDARSNTDSHRIENVLTTFAP------RPKKAWWQAENGVEHVSIQLDLEAEFHFTHLIMTFKTFRPA 198

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BLAST of laminin subunit beta-1-like vs. SwissProt
Match: gi|2497594|sp|Q01635.1|LAMB1_CHICK (RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin beta-1-1 chain; AltName: Full=Laminin-1 subunit beta; AltName: Full=Laminin-10 subunit beta; AltName: Full=Laminin-12 subunit beta; AltName: Full=Laminin-2 subunit beta; AltName: Full=Laminin-6 subunit beta; AltName: Full=Laminin-8 subunit beta)

HSP 1 Score: 142.124 bits (357), Expect = 1.852e-40
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 0

Query:   73 RRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNE 195
            + D+KCF CDS +    +    SHRIEN+V    P       + + WWQ++NG+EN TIQL+LEAEFH THLI+TFKTFRPAAM IE+S D+G+TW+++RYFAY+C  SFPGI  G  + +++
Sbjct:    3 QEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAP------NRLKLWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVDD 119

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BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1325293260|ref|XP_023330243.1| (laminin subunit beta-1-like [Eurytemora affinis] >gi|1325293265|ref|XP_023330244.1| laminin subunit beta-1-like [Eurytemora affinis] >gi|1325293269|ref|XP_023330245.1| laminin subunit beta-1-like [Eurytemora affinis])

HSP 1 Score: 256.529 bits (654), Expect = 2.005e-75
Identity = 121/203 (59.61%), Postives = 153/203 (75.37%), Query Frame = 0

Query:    2 MKQHLVTTLLALGLVALSESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLE-------YSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAP-SQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            +K  L+T L ++ L+  S  YTPVS+GC++RSCYPATGNLLIGR++K+ +T TCG   K RYCI+S L+       Y+ R  KC+WCD      ASNP  SH + +IV+R EPPEA+  ++Q  TWWQA NG EN T+QLDLEAEFHVTH+IITFKTFRPAAMY+EKS+DWG++WKIHRYF+ NC K FP I++G PR+L ET
Sbjct:    3 VKYILITALFSI-LLQGSAGYTPVSQGCDQRSCYPATGNLLIGREEKISSTDTCGQNGKSRYCIISSLDPHTLGGGYADRRDKCYWCD------ASNPEESHEVRSIVHRWEPPEASSRAEQKMTWWQASNGQENVTLQLDLEAEFHVTHIIITFKTFRPAAMYVEKSFDWGKSWKIHRYFSANCDKDFPQIHKGVPRHLEET 198

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BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1339064381|ref|XP_023714392.1| (laminin subunit beta-1 isoform X1 [Cryptotermes secundus])

HSP 1 Score: 234.572 bits (597), Expect = 1.035e-67
Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  A+NPR SHRIENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +SFP + +  PR L + 
Sbjct:  115 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-ANNPRLSHRIENIVYRF-----APGTRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGLTWQVYRYFAYNCDESFPNVPKHNPRTLTDV 273

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BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1339064383|ref|XP_023714399.1| (laminin subunit beta-1 isoform X2 [Cryptotermes secundus])

HSP 1 Score: 234.572 bits (597), Expect = 1.062e-67
Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  A+NPR SHRIENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +SFP + +  PR L + 
Sbjct:   45 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-ANNPRLSHRIENIVYRF-----APGTRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGLTWQVYRYFAYNCDESFPNVPKHNPRTLTDV 203

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BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1330931637|gb|PNF42363.1| (Laminin subunit beta-1, partial [Cryptotermes secundus])

HSP 1 Score: 231.876 bits (590), Expect = 3.458e-67
Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 0

Query:   15 LVALSESYTPV-SRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            +  +   YTP     CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  A+NPR SHRIENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +SFP + +  PR L + 
Sbjct:   30 VTPIRGGYTPQRPHPCEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-ANNPRLSHRIENIVYRF-----APGTRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGLTWQVYRYFAYNCDESFPNVPKHNPRTLTDV 203

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1330931638|gb|PNF42364.1| (Laminin subunit beta-1, partial [Cryptotermes secundus])

HSP 1 Score: 231.491 bits (589), Expect = 6.626e-67
Identity = 111/168 (66.07%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  A+NPR SHRIENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +SFP + +  PR L + 
Sbjct:  115 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-ANNPRLSHRIENIVYRF-----APGTRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGLTWQVYRYFAYNCDESFPNVPKHNPRTLTDV 273

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1227989756|ref|XP_021926606.1| (laminin subunit beta-1 isoform X3 [Zootermopsis nevadensis] >gi|646710327|gb|KDR15871.1| Laminin subunit beta-1 [Zootermopsis nevadensis])

HSP 1 Score: 231.491 bits (589), Expect = 1.193e-66
Identity = 108/168 (64.29%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  ++NPR SHR+ENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +S+P + +  PR L + 
Sbjct:   45 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-SNNPRLSHRVENIVYRF-----APGIRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGSTWQVYRYFAYNCDESYPNVPKHNPRTLTDV 203

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1227989754|ref|XP_021926605.1| (laminin subunit beta-1 isoform X2 [Zootermopsis nevadensis])

HSP 1 Score: 231.106 bits (588), Expect = 1.317e-66
Identity = 108/168 (64.29%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  ++NPR SHR+ENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +S+P + +  PR L + 
Sbjct:  115 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-SNNPRLSHRVENIVYRF-----APGIRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGSTWQVYRYFAYNCDESYPNVPKHNPRTLTDV 273

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1227989748|ref|XP_021926601.1| (laminin subunit beta-1 isoform X1 [Zootermopsis nevadensis] >gi|1227989750|ref|XP_021926602.1| laminin subunit beta-1 isoform X1 [Zootermopsis nevadensis] >gi|1227989752|ref|XP_021926604.1| laminin subunit beta-1 isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 231.106 bits (588), Expect = 1.370e-66
Identity = 108/168 (64.29%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLLIGR+ +L A+STCGL  +ERYCI+SHLE  +   KCFWCDS  Q  ++NPR SHR+ENIVYR      AP  + R+WWQ+QNG+EN TIQLDLEAEFH THLIITFKTFRPAAM IE+SYD+G TW+++RYFAYNC +S+P + +  PR L + 
Sbjct:  115 CEQSSCYPATGNLLIGREPRLSASSTCGLYAQERYCIVSHLEDHK---KCFWCDSRPQN-SNNPRLSHRVENIVYRF-----APGIRQRSWWQSQNGVENVTIQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFGSTWQVYRYFAYNCDESYPNVPKHNPRTLTDV 273

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|321474022|gb|EFX84988.1| (hypothetical protein DAPPUDRAFT_300823 [Daphnia pulex])

HSP 1 Score: 229.565 bits (584), Expect = 5.940e-66
Identity = 111/191 (58.12%), Postives = 143/191 (74.87%), Query Frame = 0

Query:    6 LVTTLLALGLVALSESYTPVSRGCEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            +V T L  G+V  S+   P    CE+ SCYPATGNLL+GR+ +L ++STCGL++KE+YCI+SHLE  +   KCFWCDS  + +  N  +SH I+NI+YR       P+ + R+WWQAQNG+EN +IQLDLEAEFH THLI+TFKTFRPAA+ IE+SYD+G+TWKI+RYFAYNCA+SFPG+    PR L E 
Sbjct:   13 VVATCLTTGVV--SQRPHP----CEQSSCYPATGNLLLGREMRLSSSSTCGLQKKEKYCIVSHLEDKK---KCFWCDSRPEQV--NSPSSHHIQNILYRY-----TPTSRRRSWWQAQNGVENVSIQLDLEAEFHFTHLIMTFKTFRPAALLIERSYDFGRTWKIYRYFAYNCAESFPGVSREPPRNLTEV 187

[Close]

BLAST of laminin subunit beta-1-like vs. nr
Match: gi|1022762064|gb|KZS07918.1| (Laminin subunit beta-1 [Daphnia magna])

HSP 1 Score: 228.409 bits (581), Expect = 1.341e-65
Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 0

Query:   29 CEERSCYPATGNLLIGRQDKLEATSTCGLERKERYCILSHLEYSRRDQKCFWCDSTEQGIASNPRTSHRIENIVYRMEPPEAAPSQQYRTWWQAQNGIENATIQLDLEAEFHVTHLIITFKTFRPAAMYIEKSYDWGQTWKIHRYFAYNCAKSFPGIYEGAPRYLNET 196
            CE+ SCYPATGNLL+GR+ +L +TSTCGL++KE+YCI+SHLE  +   KCFWCDS  + +  N  +SH I+NI+YR       P+ + R+WWQAQNG+EN +IQLDLEAEFH THLI+TFKTFRPAA+ IE+SYD+G+TWKI+RYFAYNCA+SFPGI    PR L E 
Sbjct:   30 CEQSSCYPATGNLLLGREMRLSSTSTCGLQKKEKYCIVSHLEDKK---KCFWCDSRPEQV--NSPSSHHIQNILYRY-----TPTSRRRSWWQAQNGVENVSIQLDLEAEFHFTHLIMTFKTFRPAALLIERSYDFGRTWKIYRYFAYNCAESFPGISREPPRNLTEV 187

The following BLAST results are available for this feature:

BLAST of laminin subunit beta-1-like vs. L. salmonis genes
BLAST of laminin subunit beta-1-like vs. SwissProt
BLAST of laminin subunit beta-1-like vs. nr

BLAST of laminin subunit beta-1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAG00000012769	3.516e-85	67.18	supercontig:LSalAtl2s:LSalAtl2s96:259137:268445:-1...	[more]
EMLSAG00000010003	1.209e-8	29.93	supercontig:LSalAtl2s:LSalAtl2s656:177518:206284:1...	[more]

BLAST of laminin subunit beta-1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 23


Match Name	E-value	Identity	Description
gi\|160232264\|sp\|P11046.4\|LAMB1_DROME	1.237e-62	63.06	RecName: Full=Laminin subunit beta-1; AltName: Ful...	[more]
gi\|317373377\|sp\|P07942.2\|LAMB1_HUMAN	1.108e-58	51.55	RecName: Full=Laminin subunit beta-1; AltName: Ful...	[more]
gi\|341941025\|sp\|P02469.3\|LAMB1_MOUSE	6.569e-58	51.83	RecName: Full=Laminin subunit beta-1; AltName: Ful...	[more]
gi\|156630892\|sp\|P55268.2\|LAMB2_HUMAN	1.645e-56	50.84	RecName: Full=Laminin subunit beta-2; AltName: Ful...	[more]
gi\|126371\|sp\|P15800.1\|LAMB2_RAT	1.194e-55	52.66	RecName: Full=Laminin subunit beta-2; AltName: Ful...	[more]
gi\|341940890\|sp\|Q61292.2\|LAMB2_MOUSE	3.202e-55	52.66	RecName: Full=Laminin subunit beta-2; AltName: Ful...	[more]
gi\|162416049\|sp\|A4D0S4.1\|LAMB4_HUMAN	2.280e-49	46.49	RecName: Full=Laminin subunit beta-4; AltName: Ful...	[more]
gi\|82243519\|sp\|Q8JHV6.1\|LAMB4_DANRE	2.331e-49	49.10	RecName: Full=Laminin subunit beta-4; Flags: Precu...	[more]
gi\|2497595\|sp\|Q01636.1\|LAMBV_CHICK	3.534e-43	55.12	RecName: Full=Laminin subunit beta-1 variant; AltN...	[more]
gi\|2497594\|sp\|Q01635.1\|LAMB1_CHICK	1.852e-40	52.85	RecName: Full=Laminin subunit beta-1; AltName: Ful...	[more]

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BLAST of laminin subunit beta-1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325293260\|ref\|XP_023330243.1\|	2.005e-75	59.61	laminin subunit beta-1-like [Eurytemora affinis] >...	[more]
gi\|1339064381\|ref\|XP_023714392.1\|	1.035e-67	66.07	laminin subunit beta-1 isoform X1 [Cryptotermes se...	[more]
gi\|1339064383\|ref\|XP_023714399.1\|	1.062e-67	66.07	laminin subunit beta-1 isoform X2 [Cryptotermes se...	[more]
gi\|1330931637\|gb\|PNF42363.1\|	3.458e-67	62.30	Laminin subunit beta-1, partial [Cryptotermes secu...	[more]
gi\|1330931638\|gb\|PNF42364.1\|	6.626e-67	66.07	Laminin subunit beta-1, partial [Cryptotermes secu...	[more]
gi\|1227989756\|ref\|XP_021926606.1\|	1.193e-66	64.29	laminin subunit beta-1 isoform X3 [Zootermopsis ne...	[more]
gi\|1227989754\|ref\|XP_021926605.1\|	1.317e-66	64.29	laminin subunit beta-1 isoform X2 [Zootermopsis ne...	[more]
gi\|1227989748\|ref\|XP_021926601.1\|	1.370e-66	64.29	laminin subunit beta-1 isoform X1 [Zootermopsis ne...	[more]
gi\|321474022\|gb\|EFX84988.1\|	5.940e-66	58.12	hypothetical protein DAPPUDRAFT_300823 [Daphnia pu...	[more]
gi\|1022762064\|gb\|KZS07918.1\|	1.341e-65	63.10	Laminin subunit beta-1 [Daphnia magna]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold895_size84271	supercontig	scaffold895_size84271:67625..69839 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold895_size84271-snap-gene-0.37-mRNA-1	maker-scaffold895_size84271-snap-gene-0.37-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold895_size84271:67625..69839-

gene from alignment at scaffold895_size84271:67625..69839-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold895_size84271-snap-gene-0.37 ID=maker-scaffold895_size84271-snap-gene-0.37|Name=laminin subunit beta-1-like|organism=Tigriopus kingsejongensis|type=gene|length=2215bp|location=Sequence derived from alignment at scaffold895_size84271:67625..69839- (Tigriopus kingsejongensis)
GTTTTGAAACGTCAACATCATTTGGACGTTGCCTGTAATTCTACTATGTG
ATGAGGTAAGTTACATTCGGTTTCATAACCCCGATTAAAGGCCATGCGCG
TGTTATGCACCCTTCCTGACTCGTCGAGATAAGTTACTCAAGGAGGTCTT
TCTTCTACTAGTATGCATTCAAACGATTAAACCCGATTGGAATGTTTATC
TGTAGAATAAACACATCGACGCGGCCTTAAGCCTCAAGAATATGCCGATC
ACTTGATTCTCGTGTTGGGTATGGATATGTATCCAATAAGCTATGGTAGC
CCAAATATAGCCGTGTAAGGTCGGCACCAATCCGACAGACCATGATGGAT
CACCGAGAATGCCGGGAAGTATTTGGTCATGCAATATCGAGCACTGGCAT
ATCTTGCGCACAGAACAATTCAGTTGGCCCCAATTCGTCGTCGACCTTTG
CTCCCTCGCTGAAGGCAGATCCCACAATCGCTGAAGGAGTGAGCATGTAC
CGTACAGGGTGAACAACTTGTTTGAGGATCCTCCAATTCATCACACCTCG
CCGAATATGTCCCGGTTCTGTGAACCAGCCGAAGCTCTGCGCGCGGCCCT
GGCGGGTTTGACCTCTTTTTCGTCCTCCCCATGGATACTCAATGGCATTT
CAACTATCCGGTAGACCGGCCACTTTGACTACACATGGAGTGGTGAACTA
GTACAATTTGTACGCACTGTCTACTTCTGTGCCTACATGCTGTGGAGCAG
GACCGGTACAGAGTGGGGAAGTCACCCACCAAGCATGTGTCCCGTTACGT
ACTTACCACGAAGTGGCGTGGCATCAGGGGGCTTTGGTGGACCCAACCTT
CCGAAGCCCGGCTCTCTTTCTCTCTCGCTCTCTCGTGTTCCTGGCGCTCC
ATTGAGATGTCACCCAAGAAAGAGCTGGCCTAGAACTGACACACTCCGAC
ATGTGCAAGCCAGATGCGACTGAGATGAAGATCATTTGGTCGGATTCTGA
CCCTCTCCAGCGTACTCATGAGGTTTTTCCCTCTCTTTCTCCCACAGCTA
TCCATGTAAGGAGAACGCGAAGAACTTGGTCTCCGAGAACAACAACCCCT
TCGGAGAAGAGCCAATTTTAGGGAGTGAGTCGTGATCTGTCCGGAGCAGC
AGCAGCAGTCGTAGTCGTTGCTCGAGTGGCCTACCAGTGATCCAGTCAGG
GCTGTCCACTGGTGGAGAAGAAGAGCCTCTTGCTTAGGTGCCACCCATGT
ACATCTTTGTTCGTGGTTCCGTGTCGGAAAAATGATGTCGTGAAAGCTCG
AGCCAGCTAATGATGAAACAACATCTTGTCACAACACTCCTGGCCTTGGG
CCTGGTCGCATTGTCAGGTAAGAAGCCCATTGCCTTAGTTTAGGAACGTG
CCGTAGTGTACGAGTCTCGTGGATTTGAAGGATGAACCCTGATTGAGACT
GGATGCTAATGCCTACCCAAATGGGGATGTGTTCCATTTCAGAGAGCGGG
CCCCGATTGCGGGTCACACAGCCTGGGTGTAAGTGCGTTTATCACCTCTC
TAAGACTGGTGATGGCTTGATATGTTGATACTGCTTGATTGGTGCTGGTC
TTGGTTCTTTAGTCTCTGTACGATTCCACTCTGACCTGCATGGAACTAGG
TGGTGGTGGTCTTCTAAAACTAACCCGTTTTTCAGAGAGTTACACTCCGG
TCAGCCGCGGCTGCGAGGAAAGATCATGTTATCCGGCCACGGGAAACTTG
CTCATAGGCAGACAAGACAAGTTGGAGGCCACCTCCACTTGCGGTCTGGA
GCGGAAAGAACGCTACTGCATTCTATCGCATTTGGAGTACTCCAGGAGGG
ATCAAAAGTGCTTCTGGTGTGACTCGACCGAGCAGGGCATTGCCAGCAAT
CCAAGGACCTCTCATCGGATTGAGAACATTGTGTATCGCATGGAGCCTCC
GGAAGCGGCTCCCTCTCAGCAGTACCGAACGTGGTGGCAAGCTCAGAACG
GCATTGAAAATGCGACCATCCAGCTGGACTTGGAGGCCGAGTTTCACGTG
ACCCATTTGATCATCACCTTCAAGACTTTCCGACCTGCGGCCATGTACAT
CGAGAAGTCCTACGACTGGGGTCAGACGTGGAAAATCCACCGCTACTTCG
CCTACAACTGTGCCAAATCCTTCCCCGGCATTTATGAGGGCGCTCCGAGG
TATCTCAACGAAACA

Synonyms

The feature 'laminin subunit beta-1-like' has the following synonyms


Synonym
Tk08208

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