mannose-binding protein, maker-scaffold89_size390429-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of mannose-binding protein vs. L. salmonis genes
Match: EMLSAG00000004246 (supercontig:LSalAtl2s:LSalAtl2s222:41948:42649:-1 gene:EMLSAG00000004246 transcript:EMLSAT00000004246 description:"maker-LSalAtl2s222-augustus-gene-0.18") HSP 1 Score: 103.219 bits (256), Expect = 1.432e-27 Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 0 Query: 61 SGPSSSGSGNINYEGRTGQYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGE-AAYYWAGGVISGN--NVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPE--TSNECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 S P++S GN ++EG+ +Y LSWR ++ HSA SYC+GKGMR++S D ++K ++++ E Y+W GG IS + + WENG+ + I P WS+ GR G QP+ S CLAIL N Y + +HDV CH +KP +CE Sbjct: 65 SSPAASTVGNYDFEGK--RYLLSWRDGRSSLDHSAGSSYCRGKGMRLISLDS----SSKINHFFNLLQNERIEYFWTGGSISRDKGTLTWENGQREGISRGVFP---------WSDKGRR-GPQPDGVNSENCLAILKNVYNDG---VKFHDVGCHFQKPVICE 209
BLAST of mannose-binding protein vs. L. salmonis genes
Match: EMLSAG00000003466 (supercontig:LSalAtl2s:LSalAtl2s18:1138333:1258359:1 gene:EMLSAG00000003466 transcript:EMLSAT00000003466 description:"augustus_masked-LSalAtl2s18-processed-gene-12.0") HSP 1 Score: 68.9366 bits (167), Expect = 1.189e-14 Identity = 48/171 (28.07%), Postives = 68/171 (39.77%), Query Frame = 0 Query: 68 SGNINYEGRTGQYHLSWRT-SAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAAYYWAGGVISG--------------NNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETS----NECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 + I+ YH SW+ S T T R YC+ M ++S D+G ++R + Y W G N W + + IP P S+C +WS G P + + CLA+L N Y + +HDVACHHKKP +CE Sbjct: 52 TNQIHTMSDISSYHFSWKVDSQKTFTWQQGRDYCRTLCMDLLSLDDGVTEWNAMKSF--LIRDDIPYIWTSGRKCNFKGCDHFSLQPPITNGWFWASNKI-RIP---NPFASKCQHCVWSKTGPQPDNREGITAGRDEXCLAVLNNVYNDGIT---WHDVACHHKKPVICE 213
BLAST of mannose-binding protein vs. L. salmonis genes
Match: EMLSAG00000006192 (supercontig:LSalAtl2s:LSalAtl2s338:64951:65840:1 gene:EMLSAG00000006192 transcript:EMLSAT00000006192 description:"maker-LSalAtl2s338-augustus-gene-0.3") HSP 1 Score: 59.6918 bits (143), Expect = 3.051e-12 Identity = 43/119 (36.13%), Postives = 56/119 (47.06%), Query Frame = 0 Query: 105 MRIVSFDEGQNGAAKAAE-INSVVRGEAAYYWAGGVISGNN--VRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETSNE-CLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 M+ +S D AKA E + + YYW GG ++ + V W NG++ P PTG A R P NE CLA+L N Y + YHDV+CHH KPT+CE Sbjct: 1 MKAISLDSN----AKAEETFRLLAKDTQRYYWTGGKVNHRDQSVTWPNGQTSRNIPFWSPTG----------ARRVPQPDNREGNEFCLAVLNNFYSDG---IKYHDVSCHHVKPTICE 102
BLAST of mannose-binding protein vs. L. salmonis genes
Match: EMLSAG00000007572 (supercontig:LSalAtl2s:LSalAtl2s437:165026:167321:1 gene:EMLSAG00000007572 transcript:EMLSAT00000007572 description:"maker-LSalAtl2s437-augustus-gene-1.21") HSP 1 Score: 60.8474 bits (146), Expect = 9.804e-12 Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = 0 Query: 79 QYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSV-VRGEAAYYWAGGVI--SGNNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGG----QPETSN---ECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 +Y L++ + T A YCQG G + +S D G +N + V+ Y W GG I + + V W +G S+ G + WS+ G S QP+ + CLA+L N Y + +HDV C HKKPT+CE Sbjct: 66 RYILTFLNDCKSFTAQQADEYCQGNGGKTISLDTTDKGNF----VNQLMVKYAQRYIWTGGRINHARSTVTWPSGLSE---------GYTRGKRFWSHTGGSSRSVDIPQPDNRDGNEVCLAVLNNFYADG---VKWHDVGCTHKKPTICE 200
BLAST of mannose-binding protein vs. L. salmonis genes
Match: EMLSAG00000006435 (supercontig:LSalAtl2s:LSalAtl2s351:588545:589440:-1 gene:EMLSAG00000006435 transcript:EMLSAT00000006435 description:"maker-LSalAtl2s351-snap-gene-6.35") HSP 1 Score: 60.077 bits (144), Expect = 3.079e-11 Identity = 46/151 (30.46%), Postives = 67/151 (44.37%), Query Frame = 0 Query: 79 QYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAA-YYWAGGVISGNN--VRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQ--PETSNE-----CLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 +Y +++ T A YC+ R +S D KA IN+++ A Y W GG I N V W +G + G Q + WS G + + P+ N C+AIL N Y + +HDVACHH+KPT+C+ Sbjct: 140 KYIMTFLNGXSNFTAQEADDYCRANAGRAISLDTTD----KANYINNILAQNAQRYLWTGGRIDHNAGVVTWPSGARE---------GYQRGKRFWSYTGGASKTEDVPQPDNRDGNEVCIAILNNFYADGI---RWHDVACHHRKPTICQ 274
BLAST of mannose-binding protein vs. nr
Match: gi|1325279158|ref|XP_023324228.1| (uncharacterized protein LOC111698199 [Eurytemora affinis]) HSP 1 Score: 92.4337 bits (228), Expect = 2.287e-19 Identity = 77/235 (32.77%), Postives = 103/235 (43.83%), Query Frame = 0 Query: 18 LGLACGQFGSPFRGFGRPQNFFSQPQFQPRP--------------SFERRPSGPQR---PSGPSSSGS--------------GNINYEGRTGQYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAAYYWAGGVISGNN--VRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETSNECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 LA QF F G + F QP QP+P F+ RPS P R S P+ S S GN + G+ + L+WR S S+C+ +GM++VS D + I S + Y W GG +SG++ + W NG++D + P WS GR+ G QP+ CLAIL NTY R +HDVACHHKKP +CE Sbjct: 11 FSLASAQF--VFFGGNQAPRFGGQPSLQPQPFRSQQFQSQPFQSQQFQSRPSQPLRFGVSSSPAFSNSVPTAAASSASAGAKGNYQWGGKN--FLLTWRNGRSDFAWSEGVSFCRSQGMQLVSLDSAEKADHFLGLIGS---DRSPYSWVGGEVSGDSRTLSWLNGKTDDVRKGQHP---------WSFTGRT-GPQPDGGERCLAILNNTY---RDGVKFHDVACHHKKPVICE 225
BLAST of mannose-binding protein vs. nr
Match: gi|1325314125|ref|XP_023338739.1| (uncharacterized protein LOC111709330 [Eurytemora affinis]) HSP 1 Score: 83.9593 bits (206), Expect = 1.845e-16 Identity = 55/154 (35.71%), Postives = 80/154 (51.95%), Query Frame = 0 Query: 70 NINYEGRTGQYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEA-AYYWAGGVISGNNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPET--SNE-CLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 N ++EGR+ Y +SWR + TH ++C+ +GM+ VS D +K E +V E Y+W GG ++ GR P P+G + GLWSN G + QP+ NE CLA+L N Y + +HDV+CHH+KP +CE Sbjct: 58 NHSFEGRS--YLISWRAGCTSFTHGEGAAFCRSQGMQPVSLDT----PSKEREFTGLVGREGQKYFWTGGTVN------HGGR----PTVSWPSGRTTSSGLWSNTGGAGRPQPDNREGNEFCLAVLNNFYNDG---VRFHDVSCHHRKPVICE 192
BLAST of mannose-binding protein vs. nr
Match: gi|1325319677|ref|XP_023341628.1| (uncharacterized protein DDB_G0283357-like, partial [Eurytemora affinis]) HSP 1 Score: 81.6481 bits (200), Expect = 6.345e-15 Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 64 SSSGSGNINYEGRTGQYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAA-YYWAGGVISGN--NVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPE--TSNECLAILINTYPEDRGQPHYHDVAC 210 SSSG GN ++GR Y LSWR + A+SYC +GMR++S D +AK S + G+ + Y+WAGG IS + + WENGRS+ I P WS G S G QP+ S +CLA+L N Y + +HDV C Sbjct: 150 SSSGRGNHQWQGR--DYLLSWREGQNGFSWGQAQSYCSQRGMRMISLDS----SAKVDHFFSQMVGDRSPYFWAGGRISSDKRTLSWENGRSEGIRKGQHP---------WSFTG-SRGAQPDGQGSEDCLAVLNNFYND---ASKFHDVTC 282
BLAST of mannose-binding protein vs. nr
Match: gi|1325301869|ref|XP_023332476.1| (uncharacterized protein LOC111704467 [Eurytemora affinis]) HSP 1 Score: 77.411 bits (189), Expect = 2.149e-13 Identity = 51/152 (33.55%), Postives = 68/152 (44.74%), Query Frame = 0 Query: 80 YHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAA-YYWAGGVI--SGNNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAG---------RSPGGQPETSNECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 Y ++W+ + S A+ YC GM VS D + K E N ++ +A ++W GG++ + V W N IP WSN G R+ G P T CL IL N Y + +HDVACHHKKPTVCE Sbjct: 150 YVVTWKFGCSSFQQSDAKEYCNSMGMEAVSLDSPE----KQDEFNRLIAQDAQRFFWTGGIVDHAQKTVFWNNPSGTPIPFS--------QSAHWSNTGGAGLPQPDNRAAGEVPSTPEVCLGILNNFYADGI---KWHDVACHHKKPTVCE 286
BLAST of mannose-binding protein vs. nr
Match: gi|122003871|gb|ABM65756.1| (mannose-binding protein [Portunus pelagicus]) HSP 1 Score: 69.3218 bits (168), Expect = 5.906e-11 Identity = 70/217 (32.26%), Postives = 91/217 (41.94%), Query Frame = 0 Query: 18 LGLACGQFGSPFRGFGRPQNFFSQPQFQ---------PRPSFERRPSGPQRPSGPSSSGSGNINYEGRTGQYHLSWRTSAPTMTH-SAARSYC--QGKGMRIVSFDEGQNGAAKAAEINSVVRGEAAYYWAGGVISGNNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETSN---ECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 L + QFG QNFFS QF+ R SF R S PQ S S G+G +++ YH SW + ++ A SYC QG G VS + + K + I ++ G Y W G GNN W NG G+ + WS+ G QP+ + CLA+L D +HDV C HKKPTVCE Sbjct: 3 LTVCLAQFGG--------QNFFSNQQFRFGRPPSRSRGRNSF-RSFSRPQ--SQRSRGGTGAVHHSDNEYDYHYSWLNNERSLDGGDAVNSYCRSQGDGWTGVSIES----SRKNSFIQGLIGGNVPYIWTGAKKRGNNFVWSNG---------NLVGATFSS--WSHTGGEGRPQPDNRDPPENCLAVLGRQVYHD--GIFWHDVKCTHKKPTVCE 191
BLAST of mannose-binding protein vs. nr
Match: gi|1325282941|ref|XP_023326171.1| (uncharacterized protein LOC111699678 [Eurytemora affinis]) HSP 1 Score: 68.1662 bits (165), Expect = 1.031e-9 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 0 Query: 77 TGQYHLSWRTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAAYYWAGGVI--SGNNVRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETSNECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 T +Y SW +A MT +R +C+ G IVS D+ + A+ + V+ W GG + S V WENGR++ I +P Q +RG P G +C+A++ + E+ HD+ C + PT+CE Sbjct: 653 TPRYLKSWEENAAEMTWPESRLFCKKLGRNIVSLDQIE---ARKEVFDMVLNTNITRVWIGGRVGRSKEGVFWENGRAEGIKRGVEPWSEQGDRGA------QPDGDENHREDCVALI---HDEETDVMALHDLTCEVRLPTICE 785
BLAST of mannose-binding protein vs. nr
Match: gi|155966252|gb|ABU41080.1| (hypothetical protein [Lepeophtheirus salmonis]) HSP 1 Score: 59.6918 bits (143), Expect = 2.857e-8 Identity = 43/119 (36.13%), Postives = 56/119 (47.06%), Query Frame = 0 Query: 105 MRIVSFDEGQNGAAKAAE-INSVVRGEAAYYWAGGVISGNN--VRWENGRSDSIPPKCQPTGSQCNRGLWSNAGRSPGGQPETSNE-CLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 M+ +S D AKA E + + YYW GG ++ + V W NG++ P PTG A R P NE CLA+L N Y + YHDV+CHH KPT+CE Sbjct: 1 MKAISLDSN----AKAEETFRLLAKDTQRYYWTGGKVNHRDQSVTWPNGQTSRNIPFWSPTG----------ARRVPQPDNREGNEFCLAVLNNFYSDG---IKYHDVSCHHVKPTICE 102
BLAST of mannose-binding protein vs. nr
Match: gi|1153811962|ref|XP_020281746.1| (uncharacterized protein LOC109853764 [Pseudomyrmex gracilis]) HSP 1 Score: 58.151 bits (139), Expect = 8.909e-7 Identity = 59/204 (28.92%), Postives = 80/204 (39.22%), Query Frame = 0 Query: 39 FSQPQFQPRPSFERRPSGPQRPSGPSSSGSGNINYEGRTGQYHLSW---RTSAPTMTHSAARSYCQGKGMRIVSFDEGQNGAAKAAEINSVVRGEAAYYWAGGVISGNNVRWENGRSDSIP------------PKCQPTGSQCNRGLWSNAGRSPGGQPETSN--------ECLAILINTYPEDRGQPHYHDVACHHKKPTVCE 219 S QFQP+PS R P P I+ Y+ SW RT+ + +AR+YC+ + M +VS + A N +V+ + Y W G + R D P K PT + WS +G QP+ CLAIL Y + ++HDVACHHKKP VCE Sbjct: 13 LSSAQFQPQPS-GRILEAP----NPGLCAQRIIHQRFNGKGYYFSWANQRTAGQELDWLSARNYCRQRCMDLVSL---ETSAENEFVKNRIVQDKVKYIWTSGRLCDFK---GCDRPDLQPLHINGWFWTAELQKLAPTHDRAQND-WSESGGIGKPQPDNREAIQGGAPENCLAILNQFYNDG---VNWHDVACHHKKPWVCE 201 The following BLAST results are available for this feature:
BLAST of mannose-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of mannose-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of mannose-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 8
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold89_size390429:29766..30670- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold89_size390429-snap-gene-0.17 ID=maker-scaffold89_size390429-snap-gene-0.17|Name=mannose-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=905bp|location=Sequence derived from alignment at scaffold89_size390429:29766..30670- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'mannose-binding protein' has the following synonyms
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