nicotinic acetylcholine receptor b1 subunit splice variant, maker-scaffold902_size83268-snap-gene-0.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 264.233 bits (674), Expect = 2.513e-86 Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0 Query: 32 PGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 PG SQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLR VWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ Sbjct: 20 PGHGSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 148
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 134.42 bits (337), Expect = 4.994e-39 Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 0 Query: 9 MASLYSLLSFAL-GCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 + + + +SF L CI + + + +RL DL YNKL+RPV N T + V L QLI+VN KNQIM +N+W+ W DY+L+WD +YGG+ L +P D +W+PDIVL+NNADGN+EV + ++ +G V W PPAIY+ Sbjct: 22 VCTFFPFISFILLACIAPQQARTVLNAGNPDAKRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYK 174
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 136.346 bits (342), Expect = 1.622e-38 Identity = 63/138 (45.65%), Postives = 91/138 (65.94%), Query Frame = 0 Query: 25 LSCIHIM-PGLCSQ-EEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 +S I +M G C + +RL DL YNKL+RPV N++ V V L QLI+VN +NQIM +N+W+ W DY+++W+ +YGG+ +L +P D +W+PDIVL+NNADGN+EV + ++ G V+W PPAIY Sbjct: 7 ISLIFVMITGSCGNPDAKRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYH 144
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 133.265 bits (334), Expect = 2.393e-38 Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 0 Query: 40 ERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 +RL DL YN+LIRPV N T+K+ V GL QLI+V+ KNQ+M +NVW+ W DY+L W +YGG+ +L +P +W PDIVLFNNADG YEV + + GEV+W PPAIY+ Sbjct: 28 KRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYK 148
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 132.494 bits (332), Expect = 3.206e-37 Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 0 Query: 18 FALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 F +G ++ S + P + +RL DL Y++LIRPV N + ++ V GL Q+I ++ K QIM +NVW+ W+DY+L+W DYGG+ L +P +W PDIVL+NNADGNYEV + +++ G V+W PPAIY+ Sbjct: 12 FFIGTVYFSSVCANP-----DAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYK 149
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000001191 (supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 gene:EMLSAG00000001191 transcript:EMLSAT00000001191 description:"augustus_masked-LSalAtl2s119-processed-gene-0.1") HSP 1 Score: 97.0561 bits (240), Expect = 6.137e-27 Identity = 40/98 (40.82%), Postives = 64/98 (65.31%), Query Frame = 0 Query: 32 PGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFN 129 P L + E RL + L Y + PV+N + ++V+ G++ +I+V+EKNQI+ +N W+ W D L W+ +D+GGI +RLP D+VW+PDI+L+N Sbjct: 7 PALGGEYEYRLTKYLLSNYEPSVLPVENSSTPLDVSLGVSLHHIIDVDEKNQIITTNCWITQTWRDTHLTWNASDFGGIRTIRLPFDRVWRPDIILYN 104
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 98.2117 bits (243), Expect = 1.890e-25 Identity = 45/138 (32.61%), Postives = 84/138 (60.87%), Query Frame = 0 Query: 37 QEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI--------------SVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 Q E++++ +F YN L RPV++ + V+++ G++ ++I ++EKNQI+ +N+W+ L+W D+ L W+ ++Y I L++P + VW PDI+L+N+A + Y N+L+ +GE+ ++PP I Q Sbjct: 21 QTEKKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQ 158
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 96.6709 bits (239), Expect = 2.151e-25 Identity = 53/144 (36.81%), Postives = 75/144 (52.08%), Query Frame = 0 Query: 17 SFALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 +F+L L C + G + + +RL DL YNKL+ PV N+++ V V L QLI+VN KNQIM +N+W+ W DY+LQWD + + P +ADGN+EV + + G+V W PPAIY Sbjct: 9 TFSLTIFVLICTSVRAG--NPDAKRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTENHVYNFYLFP------------RSADGNFEVTLATKATLMASGKVEWKPPAIYH 138
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 92.8189 bits (229), Expect = 7.843e-23 Identity = 42/117 (35.90%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 41 RLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNAD-GNYEVRYKSNVLIYPDGEVLWVPP 156 RL L Y+K + PV N + V V+ G++ I L ++NE M + W+R W D L WD +DY ++ + D++W+PDI+ +NNA+ + +K++ L++ G+VLWVPP Sbjct: 265 RLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHL-DINELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPP 380
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 81.2629 bits (199), Expect = 3.562e-19 Identity = 29/66 (43.94%), Postives = 49/66 (74.24%), Query Frame = 0 Query: 95 WNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 W DY+ WD ++YGG++ + +P + +W PDI+L+NNADG+Y V + +++ DG+V+W PPAI++ Sbjct: 11 WKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFK 76
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|113060|sp|P04755.1|ACH3_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 1; AltName: Full=Nicotinic acetylcholine receptor beta 1; Flags: Precursor) HSP 1 Score: 245.358 bits (625), Expect = 8.170e-79 Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 0 Query: 35 CSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 S++EERLVRDLFRGYNKLIRPVQNMTQKV V FGLAF+QLINVNEKNQ+MKSNVWLRLVW DYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP GEVLWVPPAIYQ Sbjct: 24 ASEDEERLVRDLFRGYNKLIRPVQNMTQKVGVRFGLAFVQLINVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLWVPPAIYQ 149
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|2492622|sp|Q93149.1|ACR3_CAEEL (RecName: Full=Acetylcholine receptor subunit beta-type acr-3; Flags: Precursor) HSP 1 Score: 165.236 bits (417), Expect = 3.332e-48 Identity = 80/144 (55.56%), Postives = 105/144 (72.92%), Query Frame = 0 Query: 18 FALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQK-VEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 F++ IFL I + + EERL+ +F GYN LIRPV N + +EV F LAF+ LINV+EKNQIM++NVW + WNDYQ+QWD ++ GI +R+PPDKVW PDIVLFNNADGNY V + SNV++ G++LWVPPA+Y+ Sbjct: 7 FSIITIFL--ITELQCYPNSAEERLLSYIFDGYNSLIRPVLNASSPPIEVFFSLAFVLLINVDEKNQIMQTNVWPTMKWNDYQMQWDPREFDGIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYK 148
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|1351846|sp|P48182.1|ACR2_CAEEL (RecName: Full=Acetylcholine receptor subunit beta-type acr-2; Flags: Precursor) HSP 1 Score: 163.696 bits (413), Expect = 3.865e-47 Identity = 77/125 (61.60%), Postives = 100/125 (80.00%), Query Frame = 0 Query: 37 QEEERLVRDLFRGYNKLIRPVQNMTQK-VEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 ++E+RLV DLFR YN LIRPV+N++ V V FG+A I LINV+EKNQI+++NVWL + WND+QL W+ A+YG IS L +P D+VW PDIVLFNNADGNYEV +KSNV + G+V WVPPA+++ Sbjct: 58 EDEDRLVIDLFREYNFLIRPVKNVSSPPVVVDFGVAMILLINVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFK 182
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|2492623|sp|Q27218.1|ACH7_CAEEL (RecName: Full=Acetylcholine receptor subunit beta-type lev-1; AltName: Full=Levamisole-resistant protein 1; Flags: Precursor) HSP 1 Score: 155.992 bits (393), Expect = 1.421e-44 Identity = 71/123 (57.72%), Postives = 94/123 (76.42%), Query Frame = 0 Query: 39 EERLVRDLFRGYNKLIRPVQNMTQ-KVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 E+RL+ DLFRGYN L++PV+N ++ + V G+ + LINV+EK Q+M +NVWL + W+D+QL+WD DY I+ +R+ P+KVW PDIVLFNNADGNYEV + NVLI G VLWVPPAIY+ Sbjct: 38 EDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLINVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYK 160
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|2851453|sp|P48181.2|ACH2_CAEEL (RecName: Full=Acetylcholine receptor subunit beta-type unc-29; AltName: Full=Uncoordinated protein 29; Flags: Precursor) HSP 1 Score: 155.606 bits (392), Expect = 1.507e-44 Identity = 75/139 (53.96%), Postives = 103/139 (74.10%), Query Frame = 0 Query: 23 IFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQ-KVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 IFL I+ + S +EERL+ D+FRGYN LI+PV+N ++ + V L + LINV+EK+Q+M +NVWL L W+D+Q++W+ +YG I +R+ PDKVW PDIVLFNNADGNYEV + NV+I G++LWVPPAIY+ Sbjct: 16 IFLVIINTINA--SDDEERLMVDVFRGYNSLIQPVRNSSELPLIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYK 152
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|61211734|sp|Q5IS76.1|ACHA6_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 151.754 bits (382), Expect = 4.573e-43 Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = 0 Query: 39 EERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 EERL LF YN+ IRPV+N++ V V F +A QL NV+E NQIM++N+WLR +WNDY+L+WD +Y GI LR+P DK+WKPDIVL+NNA G+++V K+ L+ +G + W PPAI++ Sbjct: 34 EERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFK 155
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|2492620|sp|Q15825.1|ACHA6_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 151.369 bits (381), Expect = 5.814e-43 Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = 0 Query: 39 EERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 EERL LF YN+ IRPV+N++ V V F +A QL NV+E NQIM++N+WLR +WNDY+L+WD +Y GI LR+P DK+WKPDIVL+NNA G+++V K+ L+ +G + W PPAI++ Sbjct: 34 EERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFK 155
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|62901488|sp|Q91X60.1|ACHA2_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 150.984 bits (380), Expect = 1.267e-42 Identity = 69/144 (47.92%), Postives = 101/144 (70.14%), Query Frame = 0 Query: 23 IFLSCIHIMPGLCSQE------EERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 ++L C+ +MP + +Q+ E+RL + LF GYN+ RPV N + V V FGL+ QLI+V+EKNQ+M +NVWL+ WNDY+L+WD A++G I+ LR+P + +W PDIVL+NNADG + V + + ++ G V WVPPAIY+ Sbjct: 14 LYLWCLLLMPAVLAQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYK 157
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|1351848|sp|P43681.2|ACHA4_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 151.369 bits (381), Expect = 2.987e-42 Identity = 63/125 (50.40%), Postives = 93/125 (74.40%), Query Frame = 0 Query: 36 SQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 + EERL++ LF GYNK RPV N++ V V FGL+ QLI+V+EKNQ+M +NVW++ W+DY+L+WD ADY ++ +R+P + +W+PDIVL+NNADG++ V + + ++ DG V W PPAIY+ Sbjct: 34 AHAEERLLKKLFSGYNKWSRPVANISDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYK 158
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Match: gi|61211735|sp|Q5IS77.1|ACHA4_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 151.369 bits (381), Expect = 2.987e-42 Identity = 63/125 (50.40%), Postives = 93/125 (74.40%), Query Frame = 0 Query: 36 SQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 + EERL++ LF GYNK RPV N++ V V FGL+ QLI+V+EKNQ+M +NVW++ W+DY+L+WD ADY ++ +R+P + +W+PDIVL+NNADG++ V + + ++ DG V W PPAIY+ Sbjct: 34 AHAEERLLKKLFSGYNKWSRPVANISDVVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYK 158
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|1004403644|gb|EFA12056.2| (nicotinic acetylcholine receptor subunit beta1 [Tribolium castaneum]) HSP 1 Score: 261.151 bits (666), Expect = 1.617e-82 Identity = 123/147 (83.67%), Postives = 138/147 (93.88%), Query Frame = 0 Query: 14 SLLSFALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 ++ ++ +F+SC+ I+ G CS++EERLVRDLFRGYNKLIRPVQNMT+KV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI+VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 5 AMWTWTATAVFISCL-IVIGKCSEDEERLVRDLFRGYNKLIRPVQNMTEKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIAVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 150
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|158262721|ref|NP_001103418.1| (nicotinic acetylcholine receptor beta 1 subunit isoform 1 precursor [Tribolium castaneum] >gi|154810995|gb|ABS86916.1| nicotinic acetylcholine receptor subunit beta1 [Tribolium castaneum]) HSP 1 Score: 260.766 bits (665), Expect = 2.143e-82 Identity = 123/144 (85.42%), Postives = 136/144 (94.44%), Query Frame = 0 Query: 17 SFALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 ++ +F+SC+ I+ G CS++EERLVRDLFRGYNKLIRPVQNMT+KV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI+VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 3 TWTATAVFISCL-IVIGKCSEDEERLVRDLFRGYNKLIRPVQNMTEKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIAVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 145
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|227439279|gb|ACP31317.1| (nicotinic acetylcholine receptor B1 subunit splice variant [Tribolium castaneum]) HSP 1 Score: 250.366 bits (638), Expect = 2.076e-81 Identity = 118/126 (93.65%), Postives = 125/126 (99.21%), Query Frame = 0 Query: 35 CSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 CS++EERLVRDLFRGYNKLIRPVQNMT+KV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI+VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 6 CSEDEERLVRDLFRGYNKLIRPVQNMTEKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIAVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 131
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|1339063590|ref|XP_023720482.1| (acetylcholine receptor subunit beta-like 1 [Cryptotermes secundus]) HSP 1 Score: 258.455 bits (659), Expect = 2.606e-81 Identity = 121/139 (87.05%), Postives = 131/139 (94.24%), Query Frame = 0 Query: 22 CIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 +F + ++PG CS++EERLVRDLFRGYNKLIRPVQNMTQKV+V FGLAF+QLINVNEKNQIMKSNVWLRLVW+DYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 17 SLFFFWLLVLPGWCSEDEERLVRDLFRGYNKLIRPVQNMTQKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 155
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|584600360|gb|AHJ11206.1| (nicotinic acetylcholine receptor beta1 [Locusta migratoria]) HSP 1 Score: 258.455 bits (659), Expect = 2.862e-81 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0 Query: 32 PGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 PG CS++EERLVRDLFRGYNKLIRPVQNMTQKVEV FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 24 PGWCSEDEERLVRDLFRGYNKLIRPVQNMTQKVEVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 152
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|76096694|gb|ABA39253.1| (nicotinic acetylcholine receptor beta subunit [Schistocerca gregaria]) HSP 1 Score: 258.455 bits (659), Expect = 2.988e-81 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0 Query: 32 PGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 PG CS++EERLVRDLFRGYNKLIRPVQNMTQKVEV FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 25 PGWCSEDEERLVRDLFRGYNKLIRPVQNMTQKVEVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 153
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|861652669|gb|KMQ98445.1| (acetylcholine receptor subunit beta-like 1-like protein [Lasius niger]) HSP 1 Score: 259.225 bits (661), Expect = 4.971e-81 Identity = 120/137 (87.59%), Postives = 129/137 (94.16%), Query Frame = 0 Query: 24 FLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 ++ I ++PGLCS++EERLVRDLFRGYNKLIRPVQNMT+KV V FGLAF+QLINVNEKNQIMKSNVWLR VW DYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 73 LIAVIALLPGLCSEDEERLVRDLFRGYNKLIRPVQNMTEKVHVRFGLAFVQLINVNEKNQIMKSNVWLRFVWMDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 209
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|1279740587|ref|XP_022915177.1| (acetylcholine receptor subunit beta-like 1 [Onthophagus taurus]) HSP 1 Score: 257.299 bits (656), Expect = 6.746e-81 Identity = 122/143 (85.31%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 18 FALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 F L L+ I + CS++EERLVRDLFRGYNKLIRPVQNMT+KV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI+VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 8 FPLSLAVLTVIFVAGVSCSEDEERLVRDLFRGYNKLIRPVQNMTEKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIAVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 150
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|1133414953|ref|XP_019880304.1| (PREDICTED: LOW QUALITY PROTEIN: acetylcholine receptor subunit beta-like 1 [Aethina tumida]) HSP 1 Score: 257.299 bits (656), Expect = 7.936e-81 Identity = 125/156 (80.13%), Postives = 139/156 (89.10%), Query Frame = 0 Query: 5 PKKRMASLYSLLSFALGCIFLSCIHIMPGLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 P++ L +L+++ + FL I G CS++EERLVRDLFRGYNKLIRPVQNMT+KV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI+VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLWVPPAIYQ Sbjct: 4 PQQSSGLLANLVNYLIFISFLIVI----GNCSEDEERLVRDLFRGYNKLIRPVQNMTEKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIAVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQ 155
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Match: gi|1233175382|ref|XP_022188972.1| (acetylcholine receptor subunit beta-like 1 [Nilaparvata lugens]) HSP 1 Score: 256.529 bits (654), Expect = 1.061e-80 Identity = 124/143 (86.71%), Postives = 131/143 (91.61%), Query Frame = 0 Query: 19 ALGCIFLSCIHIMP-GLCSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQ 160 A + L I+P GLCS++EERLVRDLFRGYNKLIRPVQNMTQKV+V FGLAF+QLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGI VLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYP+GEVLW PPAIYQ Sbjct: 7 ATAMVLLVFGVIIPAGLCSEDEERLVRDLFRGYNKLIRPVQNMTQKVDVRFGLAFVQLINVNEKNQIMKSNVWLRLVWNDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWAPPAIYQ 149 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 14
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BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor b1 subunit splice variant vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold902_size83268:13390..30033+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold902_size83268-snap-gene-0.12 ID=maker-scaffold902_size83268-snap-gene-0.12|Name=nicotinic acetylcholine receptor b1 subunit splice variant|organism=Tigriopus kingsejongensis|type=gene|length=16644bp|location=Sequence derived from alignment at scaffold902_size83268:13390..30033+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor b1 subunit splice variant' has the following synonyms
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