translocon-associated protein subunit beta precursor, maker-scaffold91_size383040-snap-gene-1.29 (gene) Tigriopus kingsejongensis

Overview
Nametranslocon-associated protein subunit beta precursor
Unique Namemaker-scaffold91_size383040-snap-gene-1.29
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of translocon-associated protein subunit beta precursor vs. L. salmonis genes
Match: EMLSAG00000000442 (supercontig:LSalAtl2s:LSalAtl2s1068:97826:99509:1 gene:EMLSAG00000000442 transcript:EMLSAT00000000442 description:"augustus_masked-LSalAtl2s1068-processed-gene-1.2")

HSP 1 Score: 156.762 bits (395), Expect = 3.882e-49
Identity = 73/138 (52.90%), Postives = 99/138 (71.74%), Query Frame = 0
Query:   30 GAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHM 166
            G    G   A LL+ KQ+QN++LVEG DIVVKY++YN+G+  A++V + E GF    FD+V G  S +LDR+   +N++H LVVRPK+FGYF F  AEVQ R S+E +  IQ G SSDPG  +II+L++YDKQFS+H+
Sbjct:   23 GKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160          
BLAST of translocon-associated protein subunit beta precursor vs. L. salmonis genes
Match: EMLSAG00000004472 (supercontig:LSalAtl2s:LSalAtl2s232:350320:360099:1 gene:EMLSAG00000004472 transcript:EMLSAT00000004472 description:"snap_masked-LSalAtl2s232-processed-gene-3.2")

HSP 1 Score: 48.9062 bits (115), Expect = 1.397e-8
Identity = 21/67 (31.34%), Postives = 39/67 (58.21%), Query Frame = 0
Query:   59 VVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTA 125
            +VKY +YN+G+  A++  + E       +D   G  S  L  +   + ++H L+V+ K+FG+F+FT+
Sbjct:    1 MVKYGIYNIGEQPAVDAQVKEICSPEDSYDAASGNTSFNLYHIPPYSYNTHTLIVKLKKFGFFSFTS 67          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|1174451|sp|P43308.1|SSRB_HUMAN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 178.718 bits (452), Expect = 3.815e-56
Identity = 84/171 (49.12%), Postives = 117/171 (68.42%), Query Frame = 0
Query:   31 AALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAK 201
            A    + GARLL  K + NR+ VEG+D+ ++Y++YNVG SAAL+V LS+  F  +DF +V G ++V+ DR+A  +N SH +V+RP + GYFNFT+A + Y   E+   + IG +S PGQ  I+A R++D++FS H LDW AF  MTLPS+GIP LLW SSK KY+     K
Sbjct:   13 AVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED-GPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKK 182          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|134931|sp|P23438.1|SSRB_CANFA (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Glycoprotein 25H; Short=gp25H; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 178.718 bits (452), Expect = 4.162e-56
Identity = 83/162 (51.23%), Postives = 116/162 (71.60%), Query Frame = 0
Query:   35 GDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEA 196
             + GARLL  K + NR+ VEG+D+ ++Y++YNVG SAAL+V LS+  F  +DF +V G ++V+ DR+A  +N SH +V+RP + GYFNFT+A V Y  ++E   + IG +S PGQ  I+A R++D++FS H LDW AF  MTLPS+GIP LLW SSK KY+ 
Sbjct:   17 AEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYL-AQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDT 177          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 178.333 bits (451), Expect = 5.709e-56
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 0
Query:   31 AALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEA 196
            A    + GARLL  K + NR+ VEG+D+ ++Y++YNVG SAAL+V LS+  F  +DF +V G ++V+ DR+A  +N SH +V+RP + GYFNFT+A V Y   E+   + IG +S PGQ  I+A R++D++FS H LDW AF  MTLPS+G+P LLW SSK KY+ 
Sbjct:   13 AVTQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQED-GPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGVPLLLWYSSKRKYDT 177          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 178.333 bits (451), Expect = 6.298e-56
Identity = 82/161 (50.93%), Postives = 116/161 (72.05%), Query Frame = 0
Query:   36 DAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEA 196
            + GARLL  K + NR+ VEG+D+ ++Y++YNVG SAAL+V LS+  F  +DF +V G ++V+ DR+A  +N SH +V+RP + GYFNFT+A + Y  ++E   + IG +S PGQ  I+A R++D++FS H LDW AF  MTLPS+GIP LLW SSK KY+ 
Sbjct:   18 EEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYL-AQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDT 177          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|74965890|sp|Q22169.1|SSRB_CAEEL (RecName: Full=Translocon-associated protein subunit beta; Flags: Precursor)

HSP 1 Score: 111.694 bits (278), Expect = 7.204e-30
Identity = 55/164 (33.54%), Postives = 95/164 (57.93%), Query Frame = 0
Query:   39 ARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEK-GFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAK 201
            A +L  KQ  + + VE  D V++Y LYNVG   A  V + ++  F    FD+V G + V  +++ AG+N +H++V+RP+ FG+FN+TAA+V Y    E   + +  ++ PG+  I   R+YD++F+     +L F  +  P+    FLL+  SK+++  + + K
Sbjct:   25 AFILAHKQPLSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHVTL--TNTPGEGYIYRQREYDRRFAPKYTYFLVFFLIVAPTTLGSFLLFQQSKARFPNVIKKK 186          
BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Match: gi|182691581|sp|Q54VI6.2|SSRB_DICDI (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor)

HSP 1 Score: 72.7886 bits (177), Expect = 5.053e-15
Identity = 46/185 (24.86%), Postives = 89/185 (48.11%), Query Frame = 0
Query:   11 LISIGLVLCPCLVLAGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYE 195
            +IS+ LVL    V   N          GA LL  K+I    +V GK++ +++ +YNVG   A ++   +  FS  +F+ V G    + + LA  +     L V PK+ G ++ T+  + YR ++   +  +  ++      + +  DY+K+ S  + +W+ F  +   ++ +P+ + +  K  YE
Sbjct:    6 VISLFLVLFVSFVYCEN----------GAELLFHKKIVEGPVV-GKELPIQFIIYNVGSEPAYDISFIDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSGIYSLTSTVLNYRKTQTSSEFTVSSAASYSGMYVESQADYEKRTSLLIKEWITFFVLCAGAIALPYSISTYYKKNYE 179          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|1233205826|ref|XP_022202056.1| (translocon-associated protein subunit beta [Nilaparvata lugens])

HSP 1 Score: 230.72 bits (587), Expect = 6.352e-74
Identity = 105/181 (58.01%), Postives = 140/181 (77.35%), Query Frame = 0
Query:   23 VLAGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAKRD 203
            VL+G E  AA    +GARLLV KQI N++LVE  DI V+Y+LYN+G SAALNVVLS+  F  + F  VGGQM+V++DR+  G N SH  V+RPK++GY+NFTAAEV Y+P+E+ +Q+Q+  +S+PG+ LIIA  D+DK+FS H++DW AFA M LPSLGIPFLLW +SK+KYE + + K+D
Sbjct:   17 VLSGEETVAA---SSGARLLVSKQILNKYLVENMDIAVQYTLYNIGSSAALNVVLSDNSFHPEAFAFVGGQMNVKIDRIPPGTNVSHVAVIRPKKYGYYNFTAAEVNYKPTEDAKQVQVAVTSEPGEGLIIAYIDFDKKFSPHLIDWGAFALMALPSLGIPFLLWWTSKNKYEKMNKPKKD 194          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|1325330644|ref|XP_023347186.1| (translocon-associated protein subunit beta-like [Eurytemora affinis])

HSP 1 Score: 229.95 bits (585), Expect = 1.013e-73
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0
Query:   36 DAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAK 201
            +  ARLL+ KQI N++LVEG DIVVKYS++NVG SAA N+ +S+ GF   DFDLV GQ   +LDRLAAG+N S  +VVRP++FGYFNFTAAEV Y  +E    +  G SSDPGQ +IIA RDY+KQFSSH LDW+AFA MTLPSLG PF+LW SSKSKYEA+A  K
Sbjct:   20 EGAARLLLAKQIHNKYLVEGMDIVVKYSVFNVGDSAATNIQVSDNGFRPDDFDLVSGQTQFKLDRLAAGSNSSQTVVVRPRKFGYFNFTAAEVSYAGTEGSSVVLTGLSSDPGQGVIIAARDYEKQFSSHFLDWVAFAVMTLPSLGFPFMLWYSSKSKYEALALKK 185          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|1339066093|ref|XP_023723302.1| (translocon-associated protein subunit beta [Cryptotermes secundus] >gi|1330930434|gb|PNF41412.1| Translocon-associated protein subunit beta [Cryptotermes secundus])

HSP 1 Score: 229.18 bits (583), Expect = 2.631e-73
Identity = 101/165 (61.21%), Postives = 132/165 (80.00%), Query Frame = 0
Query:   36 DAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARA 200
            +  ARLL+ KQI N++LVE  DIVVKY+LYNVG SAAL V LS+  F  + F +VGGQ++++LDR+  G N SH +VVRP+++GYFNFTAAEV YRP+E+  ++Q+  +S+PG+ LIIA RDYDK+FSSH+LDW AFA MTLPSL +PFLLW SSKSKYE +++ 
Sbjct:   23 ETAARLLISKQILNKYLVEDMDIVVKYTLYNVGASAALGVQLSDNSFHPEAFTVVGGQLNIKLDRIPPGTNVSHVVVVRPRKYGYFNFTAAEVNYRPTEDASELQVAVTSEPGEGLIIAFRDYDKKFSSHVLDWGAFAVMTLPSLAVPFLLWYSSKSKYEKLSKT 187          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|225719752|gb|ACO15722.1| (Translocon-associated protein subunit beta precursor [Caligus clemensi])

HSP 1 Score: 225.328 bits (573), Expect = 9.282e-72
Identity = 107/199 (53.77%), Postives = 144/199 (72.36%), Query Frame = 0
Query:    7 VLSHLISIGLVLCPCLVLAGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIAR-AKRD 203
            +L  L+ +GL  C  +     EG         A LL+ KQ+QN++LVEG DIV+KY +YNVG   A++V + E GF    FDLV G  S +LDR+   +N++H LVVRPK+FGYFNFT+AE++YR SEE +  +QIG SSDPG  +II+L++YDKQFS+H+LDW+AFA +TLP LG+PF+LW SSKSKYE+I R +K+D
Sbjct:    4 LLCSLVVLGLFTCTSVY---GEGSDPSSSSKVAHLLLSKQVQNKYLVEGMDIVIKYGIYNVGDLPAVDVSVKEVGFPEDSFDLVSGHASFKLDRVPPHSNNTHTLVVRPKKFGYFNFTSAEIKYRVSEEADDVVQIGSSSDPGHGVIISLKNYDKQFSAHILDWIAFAVITLPPLGVPFMLWYSSKSKYESILRGSKKD 199          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|225712622|gb|ACO12157.1| (Translocon-associated protein subunit beta precursor [Lepeophtheirus salmonis] >gi|225714650|gb|ACO13171.1| Translocon-associated protein subunit beta precursor [Lepeophtheirus salmonis])

HSP 1 Score: 224.172 bits (570), Expect = 2.650e-71
Identity = 107/196 (54.59%), Postives = 144/196 (73.47%), Query Frame = 0
Query:   16 LVLCPCLVL------AGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARA-KRD 203
            L+L   +VL      + +  G    G   A LL+ KQ+QN++LVEG DIVVKY++YN+G+  A++V + E GF    FD+V G  S +LDR+   +N++H LVVRPK+FGYFNFT+AEV+YR S+E +  IQ G SSDPG  +II+L++YDKQFS+H+LDW+AFA +TLP LG+PF+LW SSKSKYE+I RA KRD
Sbjct:    3 LILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFNFTSAEVKYRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHILDWIAFAVITLPPLGVPFMLWYSSKSKYESIMRASKRD 198          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|290562754|gb|ADD38772.1| (Translocon-associated protein subunit beta [Lepeophtheirus salmonis])

HSP 1 Score: 223.787 bits (569), Expect = 3.639e-71
Identity = 107/196 (54.59%), Postives = 143/196 (72.96%), Query Frame = 0
Query:   16 LVLCPCLVL------AGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARA-KRD 203
            L+L   +VL      + +  G    G   A LL+ KQ+QN++LVEG DIVVKY++YN+G+  A++V + E GF    FD+V G  S +LDR+   +N++H LVVRPK+FGYFNFT+AEVQYR S+E +  IQ G SSDPG  +II+L++YDKQFS+H+LDW+AFA +TLP LG+PF+LW SSKSKYE+  RA KRD
Sbjct:    3 LILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFNFTSAEVQYRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHILDWIAFAVITLPPLGVPFMLWYSSKSKYESFMRASKRD 198          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|1316194616|ref|XP_023242978.1| (translocon-associated protein subunit beta-like [Centruroides sculpturatus])

HSP 1 Score: 220.705 bits (561), Expect = 4.445e-70
Identity = 100/186 (53.76%), Postives = 139/186 (74.73%), Query Frame = 0
Query:   17 VLCPCLVLAGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAKR 202
            +L  C+ + G E       ++ ARLLV K+I NR+LVEG D+V+ Y++YNVG SAAL++ L + GF   DF ++ G + +RLDRL  G N +H +VVR K++GY+NFTAAEV Y PSE+ +++QIG+++DPG+  II LRD+D++FS H++DW AFA MTLPSLGIPFLLW SSKSKYE+I +  +
Sbjct:    7 ILAICISVFGEE-------ESQARLLVHKRILNRYLVEGHDLVIDYNIYNVGGSAALDIHLVDAGFPEDDFKVINGMLKMRLDRLGPGNNITHTVVVRSKKYGYYNFTAAEVTYLPSEDAQEVQIGYTTDPGEGDIIPLRDFDRRFSPHVMDWAAFAVMTLPSLGIPFLLWYSSKSKYESIVKQAK 185          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|225710348|gb|ACO11020.1| (Translocon-associated protein subunit beta precursor [Caligus rogercresseyi])

HSP 1 Score: 220.32 bits (560), Expect = 1.008e-69
Identity = 100/167 (59.88%), Postives = 135/167 (80.84%), Query Frame = 0
Query:   39 ARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQI-QIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIAR-AKRD 203
            A+LL+ KQ+QN++LVEG DIVVKY +YN+G   A++V +SE GF    FD+  GQ S +LDR+   +N++HALVVRPK+FGYFNFT+AEV+YR SEE + I Q+G SSDPG  +II+L++YDKQFS+H+LDW+AFA +TLP L +PF+LW SSKSKYE+I + +K+D
Sbjct:   33 AQLLLSKQVQNKYLVEGMDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVASGQTSFKLDRIPPHSNNTHALVVRPKKFGYFNFTSAEVKYRVSEEADDIVQVGLSSDPGHGVIISLKNYDKQFSAHILDWIAFAVITLPPLAVPFMLWYSSKSKYESIMKGSKKD 199          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|225708928|gb|ACO10310.1| (Translocon-associated protein subunit beta precursor [Caligus rogercresseyi])

HSP 1 Score: 218.779 bits (556), Expect = 4.313e-69
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 0
Query:   39 ARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQI-QIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIAR-AKRD 203
            A+LL+ KQ+QN++LVEG DIVVKY +YN+G   A++V +SE GF    FD+V GQ S +LDR+   +N++H LVVRPK+FGYF+FT+AEV+YR SEE + I Q+G SSDPG  +II+L++YDKQFS+H+LDW+AFA +TLP L +PF+LW SSKSKYE+I + +K+D
Sbjct:   33 AQLLLSKQVQNKYLVEGMDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRPKKFGYFSFTSAEVKYRVSEEADDIVQVGLSSDPGHGVIISLKNYDKQFSAHILDWIAFAVITLPPLAVPFMLWYSSKSKYESIMKGSKKD 199          
BLAST of translocon-associated protein subunit beta precursor vs. nr
Match: gi|321468810|gb|EFX79793.1| (hypothetical protein DAPPUDRAFT_230994 [Daphnia pulex])

HSP 1 Score: 218.009 bits (554), Expect = 5.550e-69
Identity = 99/196 (50.51%), Postives = 140/196 (71.43%), Query Frame = 0
Query:    8 LSHLISIGLVLCPCLVLAGNEGGAALGGDAGARLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQIQIGHSSDPGQALIIALRDYDKQFSSHMLDWLAFAAMTLPSLGIPFLLWSSSKSKYEAIARAKRD 203
            + + + I L++   +   GNE          A+LL  KQI N++LVEG DIV+KYSL+NVG +AAL+V +++  F  QDF++VGGQ+ V +DR+A G+N +H +V+RP +FGYFNFTAAEV Y PSE   +  +G SS+PGQ  I+  ++YD++FS H+LDWL+FA M++PSL +PF LW SSKSKYEA+   K+D
Sbjct:    1 MDNWLKICLLVVFAVATTGNEEATP------AKLLFSKQILNKYLVEGMDIVIKYSLFNVGGTAALDVQVADNTFGPQDFEVVGGQLKVTIDRIAPGSNATHVVVIRPSKFGYFNFTAAEVTYLPSENAAEALVGLSSEPGQGAIVPFKEYDRKFSPHLLDWLSFAVMSMPSLVLPFALWFSSKSKYEAVLTQKKD 190          
The following BLAST results are available for this feature:
BLAST of translocon-associated protein subunit beta precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000004423.882e-4952.90supercontig:LSalAtl2s:LSalAtl2s1068:97826:99509:1 ... [more]
EMLSAG000000044721.397e-831.34supercontig:LSalAtl2s:LSalAtl2s232:350320:360099:1... [more]
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BLAST of translocon-associated protein subunit beta precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|1174451|sp|P43308.1|SSRB_HUMAN3.815e-5649.12RecName: Full=Translocon-associated protein subuni... [more]
gi|134931|sp|P23438.1|SSRB_CANFA4.162e-5651.23RecName: Full=Translocon-associated protein subuni... [more]
gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN5.709e-5650.00RecName: Full=Translocon-associated protein subuni... [more]
gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE6.298e-5650.93RecName: Full=Translocon-associated protein subuni... [more]
gi|74965890|sp|Q22169.1|SSRB_CAEEL7.204e-3033.54RecName: Full=Translocon-associated protein subuni... [more]
gi|182691581|sp|Q54VI6.2|SSRB_DICDI5.053e-1524.86RecName: Full=Translocon-associated protein subuni... [more]
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BLAST of translocon-associated protein subunit beta precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1233205826|ref|XP_022202056.1|6.352e-7458.01translocon-associated protein subunit beta [Nilapa... [more]
gi|1325330644|ref|XP_023347186.1|1.013e-7365.06translocon-associated protein subunit beta-like [E... [more]
gi|1339066093|ref|XP_023723302.1|2.631e-7361.21translocon-associated protein subunit beta [Crypto... [more]
gi|225719752|gb|ACO15722.1|9.282e-7253.77Translocon-associated protein subunit beta precurs... [more]
gi|225712622|gb|ACO12157.1|2.650e-7154.59Translocon-associated protein subunit beta precurs... [more]
gi|290562754|gb|ADD38772.1|3.639e-7154.59Translocon-associated protein subunit beta [Lepeop... [more]
gi|1316194616|ref|XP_023242978.1|4.445e-7053.76translocon-associated protein subunit beta-like [C... [more]
gi|225710348|gb|ACO11020.1|1.008e-6959.88Translocon-associated protein subunit beta precurs... [more]
gi|225708928|gb|ACO10310.1|4.313e-6959.28Translocon-associated protein subunit beta precurs... [more]
gi|321468810|gb|EFX79793.1|5.550e-6950.51hypothetical protein DAPPUDRAFT_230994 [Daphnia pu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold91_size383040supercontigscaffold91_size383040:157845..159150 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:integral to membrane
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold91_size383040-snap-gene-1.29-mRNA-1maker-scaffold91_size383040-snap-gene-1.29-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold91_size383040:157845..159150-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold91_size383040-snap-gene-1.29 ID=maker-scaffold91_size383040-snap-gene-1.29|Name=translocon-associated protein subunit beta precursor|organism=Tigriopus kingsejongensis|type=gene|length=1306bp|location=Sequence derived from alignment at scaffold91_size383040:157845..159150- (Tigriopus kingsejongensis)
CGATAGATCCCCAGGTCTGGGCTTCTATCCCGCTTTTATCCCAATGATGG GGTGGCCAGGGACACCAGCAGCCTGGAACTAGCTGGAAGGGAGACCCGTT GACGACATAATTGAGTGGGGCTTAGTAGTTGGCCACTTTGAGCATTGGCA AGTGGGCAAACTGTTCTAGCTTAGTGTTCGATCTCAACTCCACGTCCAAG TCTCCACTCCGACTTGGCCATGAAGAAGCCCGTCCTCTCCCACTTGATCT CCATCGGTCTGGTCTTGTGCCCCTGCCTGGTGTTAGCCGGCAATGAAGGG GGAGCCGCCTTGGGGGGCGACGCAGGAGCTCGCCTCCTAGTGGGCAAGCA GGTAAAGCCGCCAGGACCCACCCGCGAGGCCGAAGTGGCCCACGACTGAC CGGACGTGACTTCGCTTTCCAGATCCAGAACCGCTTTTTGGTGGAGGGCA AGGACATCGTCGTCAAATACTCGCTCTACAACGTGGGCCAAAGCGCCGCC CTCAACGTGGTACTGAGCGAGAAGGGTTTCAGCGCCCAGGACTTTGACTT GGTGGGCGGGCAGATGAGCGTGCGGCTGGATCGCTTGGCTGCGGGTGCCA ATCACTCGCACGCCCTCGTGGTCCGCCCCAAGCGCTTCGGCTACTTCAAC TTCACGGCGGCCGAGGTCCAATATCGGCCTTCGGAGGAAGTGGAGCAAAT CCAGATCGGGCACAGCTCCGATCCCGGTCAGGCCCTTATTATCGCCCTCC GAGACTACGACAAGCAGTTCTCCTCGCACATGGTAAGTCCCTGGCCACCG ACACACGTCTCTGGCGATTTCGGGTATTCGTCCAGCCAAATGGATCCACT GGCCACGGTCGGGCTTGGGAACAATGTCTCGAGTTCTAAGACGGGACCGG AATACCTTGCCGACAAAATCTGGATTGATCACCGAGGGATGATTTCTTTC AGCTCGACTGGCTGGCCTTTGCGGCCATGACTCTGCCTTCGTTAGGCATT CCCTTCCTCTTGTGGAGCTCCAGCAAGTCCAAGTACGAGGCCATTGCCCG CGCTAAAAGGGATTAGCCGGGGTAGGTGTGGACCACATCACTCCCTGGAC GCGATTTAACTGTAGGCCCATGGCCCAGGTCGCTGCCTGCTAGGAGAATC ATGCTCAGTCTCAACGCCCACCCACTCGTTATATGCTTTTTTTTATCAAG AACACCCTGGGCGCCCACCGAAGCGCACGGATGGGCCCTGCCCGGTTCGC CTGGTTATTTTCCTTTGGTCTTGAATAAAATGGAAGCCAACCCCATTCTA AATGTC
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Synonyms
The feature 'translocon-associated protein subunit beta precursor' has the following synonyms
Synonym
Tk03177
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