polyhomeotic-like protein 1, maker-scaffold959_size76551-snap-gene-0.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of polyhomeotic-like protein 1 vs. L. salmonis genes
Match: EMLSAG00000003450 (supercontig:LSalAtl2s:LSalAtl2s188:819370:821796:-1 gene:EMLSAG00000003450 transcript:EMLSAT00000003450 description:"maker-LSalAtl2s188-snap-gene-7.31") HSP 1 Score: 119.398 bits (298), Expect = 1.249e-33 Identity = 67/125 (53.60%), Postives = 78/125 (62.40%), Query Frame = 0 Query: 88 EKKRGPGRPPGSTRQSIEQQRL------NADKAKNH----GDGPPPSKKSKGMEQSAMSADPSDLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 EKKRGPGRP GSTRQ+I+ QR + K +H G GPP K+ K + + P L N + K NPLKWSVQQVCDFVK L GC++YVEDF+LQEIDGQALMLLK HL Sbjct: 106 EKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNSHHIKDGSGPPSEKRRKLTDDPIIK--PLPLPTSNSV----FGKNGNPLKWSVQQVCDFVKSLHGCAEYVEDFMLQEIDGQALMLLKTXHL 224
BLAST of polyhomeotic-like protein 1 vs. L. salmonis genes
Match: EMLSAG00000003449 (supercontig:LSalAtl2s:LSalAtl2s188:708922:714137:-1 gene:EMLSAG00000003449 transcript:EMLSAT00000003449 description:"snap_masked-LSalAtl2s188-processed-gene-7.17") HSP 1 Score: 114.005 bits (284), Expect = 8.476e-32 Identity = 62/119 (52.10%), Postives = 73/119 (61.34%), Query Frame = 0 Query: 87 TEKKRGPGRPPGSTRQSIEQQRLNAD---KAKNHGDGPPPSKKSKGMEQSAMSADPSDLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 EKKRGP RP GSTRQ+I+ QR+ K+ G G K+ K + P L N + K NPLKWSVQQVCDFVK L GC++YVEDF+LQEID QALMLLK +HL Sbjct: 91 VEKKRGPIRPSGSTRQNIDNQRIPGSGNIKSSKDGSGLSSEKRRKFAVDQIIKPPP--LSTFNSV----FKKNGNPLKWSVQQVCDFVKSLHGCAEYVEDFMLQEIDSQALMLLKTEHL 203
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|41019475|sp|P39769.2|PHP_DROME (RecName: Full=Polyhomeotic-proximal chromatin protein) HSP 1 Score: 73.9442 bits (180), Expect = 2.849e-14 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0 Query: 162 WSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 WSV V +F++ELPGC DYV+DF+ QEIDGQAL+LLK HL Sbjct: 1513 WSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLLLKEKHL 1553
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|82225880|sp|Q4V7W5.1|PHC2_XENLA (RecName: Full=Polyhomeotic-like protein 2) HSP 1 Score: 72.7886 bits (177), Expect = 3.853e-14 Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0 Query: 136 SADPSDLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 + +P +L +++ I + ++P KW+V+ V DFV+ LPGC + E+F QEIDGQAL+LLK DHL Sbjct: 254 NVEPPNLHSRDPIAMSQDFLPSDPTKWNVEDVYDFVRSLPGCQEISEEFRAQEIDGQALLLLKEDHL 320
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|81882016|sp|Q9QWH1.1|PHC2_MOUSE (RecName: Full=Polyhomeotic-like protein 2; Short=mPH2; AltName: Full=Early development regulatory protein 2; AltName: Full=p36) HSP 1 Score: 70.4774 bits (171), Expect = 4.484e-13 Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 138 DPSDLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 D D+ ++ + V + P KW+V+ V +F++ LPGC + E+F QEIDGQAL+LLK DHL Sbjct: 762 DLPDMHMRDLVGVGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHL 826
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|74750731|sp|Q8IXK0.1|PHC2_HUMAN (RecName: Full=Polyhomeotic-like protein 2; Short=hPH2; AltName: Full=Early development regulatory protein 2) HSP 1 Score: 69.3218 bits (168), Expect = 1.163e-12 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0 Query: 141 DLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 D+ ++ + + + P KW+V+ V +F++ LPGC + E+F QEIDGQAL+LLK DHL Sbjct: 773 DMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHL 834
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|82105134|sp|Q8QHL5.1|PHC2_DANRE (RecName: Full=Polyhomeotic-like protein 2) HSP 1 Score: 67.781 bits (164), Expect = 3.788e-12 Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 156 GTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 ++P KW+V+ V +F+ LPGC + E+F QEIDGQALMLLK DHL Sbjct: 757 ASDPTKWNVEDVYEFICSLPGCHEIAEEFRSQEIDGQALMLLKEDHL 803
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|224471881|sp|P78364.3|PHC1_HUMAN (RecName: Full=Polyhomeotic-like protein 1; Short=hPH1; AltName: Full=Early development regulatory protein 1) HSP 1 Score: 65.0846 bits (157), Expect = 2.788e-11 Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 + + +NP +WSV++V +F+ L GC + E+F QEIDGQAL+LLK +HL Sbjct: 928 INPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHL 980
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|30923312|sp|Q64028.2|PHC1_MOUSE (RecName: Full=Polyhomeotic-like protein 1; Short=mPH1; AltName: Full=Early development regulatory protein 1; AltName: Full=RAE-28) HSP 1 Score: 65.0846 bits (157), Expect = 3.249e-11 Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 + + +NP +WSV++V +F+ L GC + E+F QEIDGQAL+LLK +HL Sbjct: 936 INPVFLSSNPSQWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHL 988
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|74715388|sp|Q8NDX5.1|PHC3_HUMAN (RecName: Full=Polyhomeotic-like protein 3; AltName: Full=Early development regulatory protein 3; AltName: Full=Homolog of polyhomeotic 3; Short=hPH3) HSP 1 Score: 62.003 bits (149), Expect = 3.550e-10 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0 Query: 157 TNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 T P W+V V F+ LPGC D ++F QEIDGQAL+LLK DHL Sbjct: 914 TEPSIWTVDDVWAFIHSLPGCQDIADEFRAQEIDGQALLLLKEDHL 959
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Match: gi|341941266|sp|Q8CHP6.2|PHC3_MOUSE (RecName: Full=Polyhomeotic-like protein 3) HSP 1 Score: 61.6178 bits (148), Expect = 4.128e-10 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0 Query: 157 TNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 T P W+V V F+ LPGC D ++F QEIDGQAL+LLK DHL Sbjct: 912 TEPSIWTVDDVWAFIHSLPGCQDVADEFRAQEIDGQALLLLKEDHL 957
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1325257857|ref|XP_023324597.1| (polyhomeotic-proximal chromatin protein-like [Eurytemora affinis]) HSP 1 Score: 107.457 bits (267), Expect = 2.107e-23 Identity = 61/121 (50.41%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 84 TPATEKKRGPGRPPGSTRQSIEQQRLNADKAKNHGDGPPPSKKSKGMEQSAMSADPSDLKAKNKIDVEALLKGT--NPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 TP + KRGPGRPPGST+ + D K++G PP K Q S D A + L+ G NPLKW V VCDF+K LPGC +YVEDF QEIDGQALMLLKADHL Sbjct: 655 TPGGQVKRGPGRPPGSTKSN--------DTIKSNGVEPPEKKLKMKDPQPTDSLDIPSAPAPQ----QPLIPGVRGNPLKWKVTDVCDFIKNLPGCGEYVEDFAQQEIDGQALMLLKADHL 763
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1059402860|ref|XP_017774341.1| (PREDICTED: polyhomeotic-proximal chromatin protein-like isoform X3 [Nicrophorus vespilloides]) HSP 1 Score: 95.9005 bits (237), Expect = 2.053e-19 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 VE +PLKW+VQ+VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1068 VEDTTPKVDPLKWTVQEVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1120
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1059402862|ref|XP_017774342.1| (PREDICTED: polyhomeotic-proximal chromatin protein-like isoform X4 [Nicrophorus vespilloides]) HSP 1 Score: 95.9005 bits (237), Expect = 2.072e-19 Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = 0 Query: 140 SDLKAKNKIDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 S L VE +PLKW+VQ+VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1057 SSLSPTESSQVEDTTPKVDPLKWTVQEVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1119
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1059402867|ref|XP_017774345.1| (PREDICTED: polyhomeotic-proximal chromatin protein-like isoform X6 [Nicrophorus vespilloides]) HSP 1 Score: 95.9005 bits (237), Expect = 2.213e-19 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 VE +PLKW+VQ+VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1054 VEDTTPKVDPLKWTVQEVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1106
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1008433200|ref|XP_015833720.1| (PREDICTED: polyhomeotic-proximal chromatin protein isoform X2 [Tribolium castaneum]) HSP 1 Score: 95.9005 bits (237), Expect = 2.283e-19 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0 Query: 157 TNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 +PLKWSVQ VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1083 VDPLKWSVQDVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1128
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1008433198|ref|XP_015833719.1| (PREDICTED: polyhomeotic-proximal chromatin protein isoform X1 [Tribolium castaneum] >gi|1004401629|gb|KYB28494.1| polyhomeotic [Tribolium castaneum]) HSP 1 Score: 95.9005 bits (237), Expect = 2.284e-19 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0 Query: 157 TNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 +PLKWSVQ VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1086 VDPLKWSVQDVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1131
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1059402858|ref|XP_017774340.1| (PREDICTED: polyhomeotic-proximal chromatin protein-like isoform X2 [Nicrophorus vespilloides]) HSP 1 Score: 95.9005 bits (237), Expect = 2.305e-19 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 VE +PLKW+VQ+VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1074 VEDTTPKVDPLKWTVQEVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1126
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1008433204|ref|XP_015833722.1| (PREDICTED: polyhomeotic-like protein 1 isoform X4 [Tribolium castaneum]) HSP 1 Score: 95.9005 bits (237), Expect = 2.316e-19 Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0 Query: 157 TNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 +PLKWSVQ VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1039 VDPLKWSVQDVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1084
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|939257849|ref|XP_014248746.1| (polyhomeotic-like protein 3 isoform X2 [Cimex lectularius]) HSP 1 Score: 95.9005 bits (237), Expect = 2.318e-19 Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 Query: 148 IDVEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 ID L NP KWSV VC+F+K+LPGCSDYVEDF +QEIDGQALMLLKADHL Sbjct: 846 IDDIGELANINPFKWSVTDVCEFIKKLPGCSDYVEDFAIQEIDGQALMLLKADHL 900
BLAST of polyhomeotic-like protein 1 vs. nr
Match: gi|1059402856|ref|XP_017774339.1| (PREDICTED: polyhomeotic-proximal chromatin protein-like isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 95.9005 bits (237), Expect = 2.328e-19 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0 Query: 150 VEALLKGTNPLKWSVQQVCDFVKELPGCSDYVEDFLLQEIDGQALMLLKADHL 202 VE +PLKW+VQ+VCDF+K LPGCSDY EDFL+QEIDGQALMLLK DHL Sbjct: 1075 VEDTTPKVDPLKWTVQEVCDFIKNLPGCSDYAEDFLIQEIDGQALMLLKEDHL 1127 The following BLAST results are available for this feature:
BLAST of polyhomeotic-like protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of polyhomeotic-like protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 9
BLAST of polyhomeotic-like protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold959_size76551:72133..74140- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold959_size76551-snap-gene-0.22 ID=maker-scaffold959_size76551-snap-gene-0.22|Name=polyhomeotic-like protein 1|organism=Tigriopus kingsejongensis|type=gene|length=2008bp|location=Sequence derived from alignment at scaffold959_size76551:72133..74140- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'polyhomeotic-like protein 1' has the following synonyms
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