sequestosome-1 isoform x1, maker-scaffold988_size73003-snap-gene-0.15 (gene) Tigriopus kingsejongensis

Overview
Namesequestosome-1 isoform x1
Unique Namemaker-scaffold988_size73003-snap-gene-0.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of sequestosome-1 isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000527 (supercontig:LSalAtl2s:LSalAtl2s1081:72973:76122:1 gene:EMLSAG00000000527 transcript:EMLSAT00000000527 description:"snap_masked-LSalAtl2s1081-processed-gene-0.28")

HSP 1 Score: 80.4925 bits (197), Expect = 1.177e-16
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 0 
Query:  593 PGTTVSSKVSDARDQMLSMGFSDDDGWLTQLLTMKRGNIDEVLDILAPVAK 643
            P  T + KVSD+ +QM +MGFSDDDGWLTQLLTM+RG+ID+VLDIL PV K
Sbjct:  282 PYLTTTQKVSDSLEQMKAMGFSDDDGWLTQLLTMERGDIDKVLDILTPVNK 332
[Close]
BLAST of sequestosome-1 isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000869 (supercontig:LSalAtl2s:LSalAtl2s114:381511:382794:-1 gene:EMLSAG00000000869 transcript:EMLSAT00000000869 description:"augustus_masked-LSalAtl2s114-processed-gene-3.1")

HSP 1 Score: 80.8777 bits (198), Expect = 1.740e-16
Identity = 44/159 (27.67%), Postives = 76/159 (47.80%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMMRD------KESVCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRL 174
            +R+F L  PV  +  +  +    +ES F+ +W       +D + D + +  + + Q  ++       K  +  + V+S+S        +   GE H + +C  C +Q+ GFRYKC  C D+DLC +CE + +H  H  IRI  P+   P H  +   R+
Sbjct:   18 VRRFPLVEPVTLESFRSEVSELLEESCFMVHW-------RDEESDEVTVKTENEFQLALQSMGTSTPKFIITPLRVKSSS--------SFGSGETHSSVICDVCESQVKGFRYKCLTCEDYDLCSKCEAQCHHSDHRFIRIPTPKDNIPRHHLSFFRRM 161

HSP 2 Score: 51.2174 bits (121), Expect = 5.533e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:  594 GTTVSSKVSDARDQMLSMGFSDDDGWLTQLLTMKRGNIDEVLDIL 638
            GT    +V  AR  ML+MGF+DD GWLT+LL  K G+I   LD++
Sbjct:  378 GTHDDPRVDVARQAMLNMGFTDDGGWLTKLLETKGGDIGLTLDVI 422
[Close]
BLAST of sequestosome-1 isoform x1 vs. L. salmonis genes
Match: EMLSAG00000003378 (supercontig:LSalAtl2s:LSalAtl2s1854:5383:8193:1 gene:EMLSAG00000003378 transcript:EMLSAT00000003378 description:"maker-LSalAtl2s1854-augustus-gene-0.6")

HSP 1 Score: 70.8626 bits (172), Expect = 4.839e-13
Identity = 39/165 (23.64%), Postives = 76/165 (46.06%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMMRD--KESVCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRL---YERLNQG 181
            +R+F L   ++F + ++ I     +S F        + + D++ D + +  +E+ Q  + +  +++  + H+   + K            +H    C  C  +I GFRY+C  C+ ++LC  CE   NH  H ++RI  P+  Y       +H+    Y++ NQG
Sbjct:  404 VRRFQLPHSIQFDEFKNKIFNLYAKSKF-------DIYWIDTEEDRVNIDSEEEFQIALTNMSEQNAVKFHINFMTLK----------DNIHYGIFCCNCKDEIVGFRYRCLSCSFYELCATCERNGNHNQHRLLRIPSPEDMYSKSLLKLLHKCVLSYDKENQG 551
[Close]
BLAST of sequestosome-1 isoform x1 vs. SwissProt
Match: gi|74735628|sp|Q13501.1|SQSTM_HUMAN (RecName: Full=Sequestosome-1; AltName: Full=EBI3-associated protein of 60 kDa; Short=EBIAP; Short=p60; AltName: Full=Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa; AltName: Full=Ubiquitin-binding protein p62)

HSP 1 Score: 73.1738 bits (178), Expect = 1.675e-12
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0 
Query:   59 NYKDSDGDMICLTGDEDV-QEMMRDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQP 159
            +Y+D DGD++  + DE++   M   K+ + R++++     R+     CA       +HPN +C  C+  + G RYKC+VC D+DLC  CE K  H GH  +    P
Sbjct:   66 HYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSP 171
[Close]
BLAST of sequestosome-1 isoform x1 vs. SwissProt
Match: gi|75055057|sp|Q5RBA5.1|SQSTM_PONAB (RecName: Full=Sequestosome-1; AltName: Full=Ubiquitin-binding protein p62)

HSP 1 Score: 73.1738 bits (178), Expect = 1.830e-12
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0 
Query:   59 NYKDSDGDMICLTGDEDV-QEMMRDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQP 159
            +Y+D DGD++  + DE++   M   K+ + R++++     R+     CA       +HPN +C  C+  + G RYKC+VC D+DLC  CE K  H GH  +    P
Sbjct:   66 HYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSP 171
[Close]
BLAST of sequestosome-1 isoform x1 vs. SwissProt
Match: gi|77416574|sp|O08623.1|SQSTM_RAT (RecName: Full=Sequestosome-1; AltName: Full=Protein kinase C-zeta-interacting protein; Short=PKC-zeta-interacting protein; AltName: Full=Ubiquitin-binding protein p62)

HSP 1 Score: 70.8626 bits (172), Expect = 1.014e-11
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:   59 NYKDSDGDMICLTGDEDV-QEMMRDKESVCRVHVESAS--RKVFTGLCAN-SMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQP 159
            +Y+D DGD++  + DE++   M   K+ + R++++     R+     CA  +   +HPN +C  C+  + G RYKC+VC D+DLC  CE K  H  H  +    P
Sbjct:   64 HYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRREHRPPCAQEARSMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNP 168
[Close]
BLAST of sequestosome-1 isoform x1 vs. SwissProt
Match: gi|77416573|sp|Q64337.1|SQSTM_MOUSE (RecName: Full=Sequestosome-1; AltName: Full=STONE14; AltName: Full=Ubiquitin-binding protein p62)

HSP 1 Score: 70.0922 bits (170), Expect = 1.773e-11
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 0 
Query:   59 NYKDSDGDMICLTGDEDV-QEMMRDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQP 159
            +Y+D DGD++  + DE++   M   K+ + R++++     R+     CA       +HPN +C  C+  + G RYKC+VC D+DLC  CE K  H  H  +    P
Sbjct:   66 HYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRREHRPPCAQEAPRNMVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHREHSKLIFPNP 171
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1325289310|ref|XP_023329427.1| (sequestosome-1-like [Eurytemora affinis])

HSP 1 Score: 114.39 bits (285), Expect = 3.335e-23
Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = 0 
Query:   22 IRKF--CLSTPVRFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMMRDKES-VCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQ 180
            +R+F  C      F +L++ ++    + N  N    +++ + D+DGD + +  DE++   M +    V ++ ++    K       NS GE+HP   C  C   + G RYKC VC D+DLC +CE K  H  H+M+R+S PQ Q+P HFF R+H+L ER++Q
Sbjct:   21 VRRFMICKDMTNNFNNLKEKLVVVFPQLNGKN----INITWTDADGDNVTIASDEELMIAMSEMTGPVYKISIQVKGEKKVEEE-KNSTGEIHPGVSCDGCDGPVVGARYKCMVCPDYDLCEKCEGKGQHKEHNMMRLSSPQGQWPRHFFKRLHKLQERMDQ 177
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1325274318|ref|XP_023321812.1| (sequestosome-1-like [Eurytemora affinis])

HSP 1 Score: 106.686 bits (265), Expect = 1.167e-20
Identity = 58/173 (33.53%), Postives = 96/173 (55.49%), Query Frame = 0 
Query:   12 TFKVYF----DPSGIRKFCLSTPV--RFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMMRD-KESVCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYER 177
            ++K +F    D S +R+F +   V   F  L++ ++    E       ++ S+ + D+DGD + +  DE++   + +   SV ++ +  A++ V  G   N + ++HPN  C  C   I G RYKC VC+D+DLC  CE K  H  H+M+R++ PQ  +P HFF R+HR+ ER
Sbjct:    6 SYKAFFVGENDESEVRRFTIDKEVSSNFSYLREKLMMVFPELQT----KKFSILWTDTDGDNVTIANDEELAIALTEVTGSVLKITI--AAKDVKRGALKNDV-KMHPNITCDGCDGPIIGNRYKCLVCSDYDLCEVCEGKGTHKEHNMVRLTSPQGVWPQHFFKRLHRMQER 171
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1325327212|ref|XP_023345458.1| (sequestosome-1-like [Eurytemora affinis])

HSP 1 Score: 103.219 bits (256), Expect = 7.908e-20
Identity = 55/176 (31.25%), Postives = 99/176 (56.25%), Query Frame = 0 
Query:   12 TFKVY--FDPSG---IRKFCLSTPV--RFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMMRD-KESVCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLN 179
            ++K Y  F+ +G   +R+F +S  +   F +L++ ++    + +     + +S+ + D+DGD + +  DE+++  + +   +V ++++     K   G    S  E+HP   C  C   + G RYKC VC D+DLC RCE K  H  H+M+R+S  Q Q+P HFF R+H++ ER++
Sbjct:    6 SYKGYLRFEKNGEDEVRRFMISKDMSNNFNNLKEKLVVVFPQLSG----KDISITWTDADGDNVTIASDEELKIALSEMTGTVNKINILVQGEKKNNG----STREIHPGVTCDGCEGPVVGCRYKCMVCPDYDLCERCEAKGLHKDHNMMRLSSSQVQWPRHFFKRLHKIQERMD 173
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|926652228|ref|XP_013792674.1| (sequestosome-1-like [Limulus polyphemus] >gi|926652230|ref|XP_013792675.1| sequestosome-1-like [Limulus polyphemus])

HSP 1 Score: 97.0561 bits (240), Expect = 1.621e-17
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 0 
Query:   56 VSLNYKDSDGDMICLTGDEDVQEMMRDKES-VCRVHVESASRKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERL 178
            + L ++DS+GD I ++ DE++ E +   E+ + +VH+   + K    +   S GE  +HPN  C  C  Q+ G+RYKC  C DFDLC  C  +  HPGHDMI+I+ P  Q+ P FF    +L+  +
Sbjct:   51 IHLAWRDSEGDEIIMSSDEELAEAIAQAENDLLKVHI-YLNVKDEPSMKKQSGGEKVVHPNVTCDKCDKQVKGYRYKCLRCNDFDLCEDCHAQDAHPGHDMIKITSP-VQHSPWFFPGWQKLWHHI 174
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1351544139|ref|XP_024055545.1| (sequestosome-1 isoform X3 [Terrapene mexicana triunguis])

HSP 1 Score: 92.4337 bits (228), Expect = 3.746e-16
Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQD-------AIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMM-RDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQGSP 183
            IR+F L  P R+QD++D        ++R+              +NYKD DGDMI  + DE+++  +   K+ + R++++     R+     C        +HPN +C  C   + G R+KC +C D+DLC  CE K  H  H+MI    P    P  +F R  R   ++  G P
Sbjct:   20 IRRFALEPPARYQDVRDKLCEIFPGLLRAGAAPG------TFQMNYKDEDGDMIAFSSDEELKMALPYVKDGIFRIYIKEKKECRREHRSQCNQERPPNVVHPNVICDGCEGPVVGARFKCTICPDYDLCSTCEGKGIHKEHNMIMFQSPLLN-PFEWFPR-GRWLRKMRHGVP 185
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|884799256|ref|XP_012984037.1| (PREDICTED: sequestosome-1 isoform X1 [Melopsittacus undulatus])

HSP 1 Score: 90.8929 bits (224), Expect = 1.396e-15
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQDAIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMM-RDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQGSP 183
            IR+F L  PVR+Q + D I    +            ++YKD DGD+I  + DE+++  M   K+ V RV+++     R+     C+       +HPN +C  C   + G R+KC VC D+DLC  CE K  H  H+M+    P     P  +    R   ++  G P
Sbjct:   20 IRRFALPLPVRYQAIHDRIAELFQGLLRAGPPPAFRMHYKDEDGDLIAFSTDEELEMAMPYMKDGVFRVYIKEKKECRREHRSQCSQEPPRDMVHPNVICDGCEGPVVGARFKCTVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLN--PFEWLPRGRWLRKMRHGVP 184
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1351544135|ref|XP_024055543.1| (sequestosome-1 isoform X1 [Terrapene mexicana triunguis])

HSP 1 Score: 90.8929 bits (224), Expect = 1.452e-15
Identity = 53/179 (29.61%), Postives = 83/179 (46.37%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQD-------AIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMM-RDKESVCRVHVESA-------SRKVFTGLCANSM--GELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQGSP 183
            IR+F L  P R+QD++D        ++R+              +NYKD DGDMI  + DE+++  +   K+ + R++++          R+     C        +HPN +C  C   + G R+KC +C D+DLC  CE K  H  H+MI    P    P  +F R  R   ++  G P
Sbjct:   20 IRRFALEPPARYQDVRDKLCEIFPGLLRAGAAPG------TFQMNYKDEDGDMIAFSSDEELKMALPYVKDGIFRIYIKGIFFLEKKECRREHRSQCNQERPPNVVHPNVICDGCEGPVVGARFKCTICPDYDLCSTCEGKGIHKEHNMIMFQSPLLN-PFEWFPR-GRWLRKMRHGVP 190
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|1351544137|ref|XP_024055544.1| (sequestosome-1 isoform X2 [Terrapene mexicana triunguis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.495e-15
Identity = 53/179 (29.61%), Postives = 83/179 (46.37%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQD-------AIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMM-RDKESVCRVHVESA-------SRKVFTGLCANSM--GELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQGSP 183
            IR+F L  P R+QD++D        ++R+              +NYKD DGDMI  + DE+++  +   K+ + R++++          R+     C        +HPN +C  C   + G R+KC +C D+DLC  CE K  H  H+MI    P    P  +F R  R   ++  G P
Sbjct:   20 IRRFALEPPARYQDVRDKLCEIFPGLLRAGAAPG------TFQMNYKDEDGDMIAFSSDEELKMALPYVKDGIFRIYIKGIFFLEKKECRREHRSQCNQERPPNVVHPNVICDGCEGPVVGARFKCTICPDYDLCSTCEGKGIHKEHNMIMFQSPLLN-PFEWFPR-GRWLRKMRHGVP 190
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|527258015|ref|XP_005147271.1| (PREDICTED: sequestosome-1 isoform X2 [Melopsittacus undulatus])

HSP 1 Score: 90.5077 bits (223), Expect = 1.509e-15
Identity = 53/174 (30.46%), Postives = 82/174 (47.13%), Query Frame = 0 
Query:   22 IRKFCLSTPVRFQDLQD-------AIIRSDKESNFVNNWEQVSLNYKDSDGDMICLTGDEDVQEMM-RDKESVCRVHVESAS--RKVFTGLCANSMGE--LHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQRQYPPHFFTRIHRLYERLNQGSP 183
            IR+F L  PVR+Q + D        ++R+     F        ++YKD DGD+I  + DE+++  M   K+ V RV+++     R+     C+       +HPN +C  C   + G R+KC VC D+DLC  CE K  H  H+M+    P     P  +    R   ++  G P
Sbjct:   20 IRRFALPLPVRYQAIHDRIAELFQGLLRAGPPPAF-------RMHYKDEDGDLIAFSTDEELEMAMPYMKDGVFRVYIKEKKECRREHRSQCSQEPPRDMVHPNVICDGCEGPVVGARFKCTVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLN--PFEWLPRGRWLRKMRHGVP 184
[Close]
BLAST of sequestosome-1 isoform x1 vs. nr
Match: gi|291236035|ref|XP_002737931.1| (PREDICTED: sequestosome-1-like [Saccoglossus kowalevskii])

HSP 1 Score: 90.5077 bits (223), Expect = 1.732e-15
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 0 
Query:   57 SLNYKDSDGDMICLTGDED-VQEMMRDKESVCRVHVESASRKVFTGLCANSMGELHPNSVCMCCHTQINGFRYKCAVCADFDLCGRCETKANHPGHDMIRISQPQ 160
            +L+Y+DS+GD+I  + DE+ V  + +  E + RV+++   +KV           LHP  +C  C  +I G R+KCAVC D+DLC  CE K  HP H+MI+I +PQ
Sbjct:   84 TLSYRDSEGDLIAFSSDEELVDALGQLSEDIFRVYIKLTGKKVSHDESKCGEKVLHPGVICDGCEGRIFGPRFKCAVCPDYDLCKGCEEKGLHPDHEMIKIRKPQ 188
The following BLAST results are available for this feature:
BLAST of sequestosome-1 isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000005271.177e-1670.59supercontig:LSalAtl2s:LSalAtl2s1081:72973:76122:1 ... [more]
EMLSAG000000008691.740e-1627.67supercontig:LSalAtl2s:LSalAtl2s114:381511:382794:-... [more]
EMLSAG000000033784.839e-1323.64supercontig:LSalAtl2s:LSalAtl2s1854:5383:8193:1 ge... [more]
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BLAST of sequestosome-1 isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|74735628|sp|Q13501.1|SQSTM_HUMAN1.675e-1233.96RecName: Full=Sequestosome-1; AltName: Full=EBI3-a... [more]
gi|75055057|sp|Q5RBA5.1|SQSTM_PONAB1.830e-1233.96RecName: Full=Sequestosome-1; AltName: Full=Ubiqui... [more]
gi|77416574|sp|O08623.1|SQSTM_RAT1.014e-1133.33RecName: Full=Sequestosome-1; AltName: Full=Protei... [more]
gi|77416573|sp|Q64337.1|SQSTM_MOUSE1.773e-1133.02RecName: Full=Sequestosome-1; AltName: Full=STONE1... [more]
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BLAST of sequestosome-1 isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325289310|ref|XP_023329427.1|3.335e-2334.57sequestosome-1-like [Eurytemora affinis][more]
gi|1325274318|ref|XP_023321812.1|1.167e-2033.53sequestosome-1-like [Eurytemora affinis][more]
gi|1325327212|ref|XP_023345458.1|7.908e-2031.25sequestosome-1-like [Eurytemora affinis][more]
gi|926652228|ref|XP_013792674.1|1.621e-1738.10sequestosome-1-like [Limulus polyphemus] >gi|92665... [more]
gi|1351544139|ref|XP_024055545.1|3.746e-1630.46sequestosome-1 isoform X3 [Terrapene mexicana triu... [more]
gi|884799256|ref|XP_012984037.1|1.396e-1531.14PREDICTED: sequestosome-1 isoform X1 [Melopsittacu... [more]
gi|1351544135|ref|XP_024055543.1|1.452e-1529.61sequestosome-1 isoform X1 [Terrapene mexicana triu... [more]
gi|1351544137|ref|XP_024055544.1|1.495e-1529.61sequestosome-1 isoform X2 [Terrapene mexicana triu... [more]
gi|527258015|ref|XP_005147271.1|1.509e-1530.46PREDICTED: sequestosome-1 isoform X2 [Melopsittacu... [more]
gi|291236035|ref|XP_002737931.1|1.732e-1540.95PREDICTED: sequestosome-1-like [Saccoglossus kowal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold988_size73003supercontigscaffold988_size73003:31695..34167 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold988_size73003-snap-gene-0.15-mRNA-1maker-scaffold988_size73003-snap-gene-0.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold988_size73003:31695..34167-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold988_size73003-snap-gene-0.15 ID=maker-scaffold988_size73003-snap-gene-0.15|Name=sequestosome-1 isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=2473bp|location=Sequence derived from alignment at scaffold988_size73003:31695..34167- (Tigriopus kingsejongensis)
GTCTTCAGTAGGCATACTCACTTCAGTGATGTAAATGTTTTTGTGAGATT
ATCTGGGTGAACTTTAAACAAAGCGTATTTCATCTTGCATCGGCAACATG
ATTGAAAGCTCGACGTTCGACTCGCTCCAAACCTTCAAGGTTTACTTTGA
TCCATCCGGGATCAGAAAATTCTGCTTGTCCACGCCAGTGAGATTCCAGG
ACCTCCAAGATGCCATCATCAGATCCGATAAAGAATCCAATTTCGTGAAC
AATTGGGAGCAAGTGAGTTTGAACTACAAGGATTCGGACGGTGACATGAT
CTGCTTGACGGGCGACGAGGATGTCCAAGAAATGATGAGGGACAAGGTGA
GTCCGATTTCAGAAATCTCCTCCGACTCAAACTTGATTGTCCTCTCCGAC
CGGCAGGAAAGCGTCTGCCGAGTTCACGTGGAATCGGCTTCCAGAAAGGT
CTTCACTGGACTCTGCGCCAATTCCATGGGGGAACTCCATCCGAACAGTG
TGTGCATGTGCTGTCACACACAGATCAATGGGTTCCGATACAAGTGTGCT
GTGTGTGCCGATTTCGACCTCTGTGGCAGGTAAGCAAGCCGAATCTGAAC
CCACTGGAGGGGAGGAGAACCATCGTATAGATTTTCTACCATCCAGAGCG
ATATGTAAACTTGATGAGAGTAGAAAAATGACGTGTTACTGGCGTCTTTC
TACCCCAAATACGCATATTGGCCCCCGATTCTAGAAAAAGCATGAATCCC
ATTCTCCAGTGTCAAATGCATGGATGAATGATTGAATGATTGATTCTAAA
CCAATACCTTGGACATCGTAGATGTGAGACCAAAGCCAATCATCCTGGTC
ACGATATGATCCGGATATCACAGCCACAACGGCAATACCCGCCCCATTTC
TTCACGCGAATTCACAGGTGGGTGCTGATACTGGTTTGATTCGTGCACGA
CTTTGAAACACTTGTATCCATTCTCGCCTATAGGCTCTACGAGCGCCTCA
ATCAAGGATCCCCAATCACATTTCGCTCCCCAACCAACTCTACGCCGGGT
TTGGAGCCAATGGCACGAGATCTCATTGATGATGAACTGGACAGTCCGGA
CATTTCGGCCCTGATGCTGGATGAGAAACATCATTGCGACGATATCAAGG
AGGCATCTTTGCCCACGATTGAGGAGCTGACCAAGCACATGCAAAATCTG
GCGGATCAAGATGACCCGACCGAATGTTTGGATGAGCCCCAATTGCGAAA
AAACTACTATAACTGTGATAAGCTAATGATCCTCGATAACATTGTCAAAT
TGGAACCTTCTCATCCCGAGGTCATCGCCCTCATGATTGAGCCCATTCAA
GTGACGGAACAGAAGGCCAAGATACCAAGTCAAAGAGTCAAGGAGTCCGG
CATGGAATACGATTCCATCCAGGATCTGCAGGAGGAAATCGACAAGCTCC
TCGAGCCTTTGTCCAAAGAACCCGGTCGGAGTAGTCAAGAGCGAAGAGCT
TCCTTCTCCAAGTCCAGTTCCAGCAGCGTTTCCTCGAGTCCGTTTGAATT
GTGCGAAATTCCTCAACGCCAGATTATCATCGAGAAAGCAATTGTGGAGG
ATAATGGGAAGCGTGAGCGCGAGGGTTACTCTTCTGAGGAGGAATTCAAG
GCCACGCCGCCCAAGAATGCCCGGAAGTCATCCAATGAGAGGCCCAATAG
TAGGCAGCAAATGCTTTTTGACGAGATCACCGTGGCTGAAGTGACGGAAG
AGGTCTGCGAAGACACCCTCGACGACCTGGAGGAGGTGGCCGACGATGAT
GAATACGAGTATGAATACGAGGACGAGGAGGACGAGACGCCGCAGGCGTC
TCCGGTCACCACCATCGAGGTGCCAGCCCCCATCGAATCGACCATCAGAT
CGTCCTCGAGTCGAGCGACGGGAGAAGAGGCGACTAAGTACACCGACAGT
CGATCCAGCTTGAACGAGGCCGACAAGTTCTTGTTCTCAACCAGTCGCAT
GGAGCTTCGGCGAGCTCTGCATCGGGCAGGGATCGACTCCACCATTTTCA
ATGAGAACCAGGGTGCCAACTCCTCTTCAACCTTGGCCATCAGCTCCCCG
TCAGCCAGCCAGCCCAGTCCGTCGGCCTCCGCCAAACCCGGCTACGAACC
GGTTTGGAAAGGGATTTCAACATCCGTGACACCCCGTGATAACAGTAAAA
CGTACTCCTCAACCTCCTACGGGGACTACGGCCTGTACAAGCCCGGCACC
ACGGTCTCGAGTAAAGTGTCGGATGCCCGCGATCAAATGCTCTCTATGGG
CTTCTCGGATGACGATGGCTGGTTGACTCAGCTCCTGACCATGAAACGAG
GCAACATCGATGAGGTGCTAGACATTCTGGCCCCTGTTGCCAAGTCGTGA
GGAAGAAAACCGCTAGGTGAACCCCTGAGGACACGCTACGTACGCATACA
CAATTCGTGGTCCAATTTTAACC
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Synonyms
The feature 'sequestosome-1 isoform x1' has the following synonyms
Synonym
Tk02479
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