histone -like, maker-scaffold98_size375582-snap-gene-2.31 (gene) Tigriopus kingsejongensis

Overview


Name	histone -like
Unique Name	maker-scaffold98_size375582-snap-gene-2.31
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000007016 (supercontig:LSalAtl2s:LSalAtl2s399:369072:370235:1 gene:EMLSAG00000007016 transcript:EMLSAT00000007016 description:"augustus_masked-LSalAtl2s399-processed-gene-3.0")

HSP 1 Score: 179.874 bits (455), Expect = 1.408e-59
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000005052 (supercontig:LSalAtl2s:LSalAtl2s263:50184:50594:1 gene:EMLSAG00000005052 transcript:EMLSAT00000005052 description:"augustus_masked-LSalAtl2s263-processed-gene-0.2")

HSP 1 Score: 174.481 bits (441), Expect = 1.613e-57
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000005193 (supercontig:LSalAtl2s:LSalAtl2s2742:9871:10281:-1 gene:EMLSAG00000005193 transcript:EMLSAT00000005193 description:"augustus-LSalAtl2s2742-processed-gene-0.1")

HSP 1 Score: 174.481 bits (441), Expect = 1.613e-57
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000009977 (supercontig:LSalAtl2s:LSalAtl2s652:276147:278120:1 gene:EMLSAG00000009977 transcript:EMLSAT00000009977 description:"maker-LSalAtl2s652-snap-gene-2.38")

HSP 1 Score: 172.555 bits (436), Expect = 2.281e-57
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query:   60 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    8 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 92

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000000378 (supercontig:LSalAtl2s:LSalAtl2s1058:129792:130401:-1 gene:EMLSAG00000000378 transcript:EMLSAT00000000378 description:"snap_masked-LSalAtl2s1058-processed-gene-0.5")

HSP 1 Score: 132.494 bits (332), Expect = 1.465e-41
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0

Query:   78 RLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            RLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   25 RLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 91

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000001872 (supercontig:LSalAtl2s:LSalAtl2s1322:13257:13733:-1 gene:EMLSAG00000001872 transcript:EMLSAT00000001872 description:"augustus_masked-LSalAtl2s1322-processed-gene-0.3")

HSP 1 Score: 110.538 bits (275), Expect = 5.340e-32
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 0

Query:   48 QTLDQWPEPLREIRRYQKSTELLIRKLPFQRLVREIAQDFK-TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 139
            + +++ P+ LR+I RY++STELLIRK+PF RLV+EI      TD + Q  AI ALQE  E Y+  LFE +NLC IHA+RVT+MPKDI+LARRI
Sbjct:   63 RVVNKKPKWLRDIHRYRRSTELLIRKMPFYRLVKEIINQIACTDFKVQVLAISALQEGCENYITDLFEKSNLCCIHARRVTLMPKDIRLARRI 155

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000000659 (supercontig:LSalAtl2s:LSalAtl2s1105:15895:22907:-1 gene:EMLSAG00000000659 transcript:EMLSAT00000000659 description:"maker-LSalAtl2s1105-augustus-gene-0.32")

HSP 1 Score: 107.457 bits (267), Expect = 3.372e-28
Identity = 56/81 (69.14%), Postives = 64/81 (79.01%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIA--QDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 135
            LREIR +QK T+LLI  LPF RLV+EI+     KTD+RFQS+A+ ALQEA+E YLV LFED  L AIHAKRVTIMPKDI L
Sbjct:  108 LREIRHFQKKTDLLIPHLPFSRLVKEISIKASSKTDIRFQSSALQALQEAAETYLVHLFEDVVLLAIHAKRVTIMPKDIIL 188

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000011182 (supercontig:LSalAtl2s:LSalAtl2s760:411575:414587:1 gene:EMLSAG00000011182 transcript:EMLSAT00000011182 description:"snap_masked-LSalAtl2s760-processed-gene-3.20")

HSP 1 Score: 94.7449 bits (234), Expect = 1.743e-26
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 0

Query:  100 ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    2 ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 46

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000011192 (supercontig:LSalAtl2s:LSalAtl2s760:431843:433024:1 gene:EMLSAG00000011192 transcript:EMLSAT00000011192 description:"snap-LSalAtl2s760-processed-gene-3.76")

HSP 1 Score: 92.0485 bits (227), Expect = 9.752e-26
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0

Query:  100 ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 142
            ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
Sbjct:    2 ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 44

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BLAST of histone -like vs. L. salmonis genes
Match: EMLSAG00000005990 (supercontig:LSalAtl2s:LSalAtl2s323:266828:267898:1 gene:EMLSAG00000005990 transcript:EMLSAT00000005990 description:"snap-LSalAtl2s323-processed-gene-2.28")

HSP 1 Score: 66.6254 bits (161), Expect = 1.085e-15
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0

Query:   91 LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 142
            L F    + ALQE+S AYLV  F+D NLCAI+ KRVTIM KDIQL+RRI  E
Sbjct:   37 LEFPVLLVMALQESSAAYLVRFFQDNNLCAINYKRVTIMSKDIQLSRRICDE 88

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BLAST of histone -like vs. SwissProt
Match: gi|55977042|sp|P84245.2|H33_RAT (RecName: Full=Histone H3.3 >gi|55977062|sp|P84243.2|H33_HUMAN RecName: Full=Histone H3.3 >gi|55977063|sp|P84244.2|H33_MOUSE RecName: Full=Histone H3.3 >gi|55977064|sp|P84246.2|H33_RABIT RecName: Full=Histone H3.3 >gi|55977065|sp|P84247.2|H33_CHICK RecName: Full=Histone H3.3; AltName: Full=H3.3A/B; AltName: Full=Histone H3 class II >gi|55977066|sp|P84248.2|H33_SPISO RecName: Full=Histone H3.3 >gi|55977068|sp|P84250.2|H33_DROHY RecName: Full=Histone H3.3; AltName: Full=H3.A/B >gi|56404321|sp|Q71LE2.3|H33_PIG RecName: Full=Histone H3.3 >gi|75040237|sp|Q5E9F8.3|H33_BOVIN RecName: Full=Histone H3.3 >gi|82237558|sp|Q6P823.3|H33_XENTR RecName: Full=Histone H3.3 >gi|82237785|sp|Q6PI20.3|H33_DANRE RecName: Full=Histone H3.3 >gi|82237787|sp|Q6PI79.3|H33_XENLA RecName: Full=Histone H3.3 >gi|1352911993|sp|C0HL66.1|H33A_DROME RecName: Full=Histone H3.3A; AltName: Full=H3.A >gi|1352911994|sp|C0HL67.1|H33B_DROME RecName: Full=Histone H3.3B; AltName: Full=H3.B)

HSP 1 Score: 179.874 bits (455), Expect = 3.306e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|1708108|sp|Q10453.2|H331_CAEEL (RecName: Full=Histone H3.3 type 1)

HSP 1 Score: 179.874 bits (455), Expect = 3.416e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|391358189|sp|P02301.3|H3C_MOUSE (RecName: Full=Histone H3.3C; AltName: Full=Embryonic)

HSP 1 Score: 179.874 bits (455), Expect = 3.729e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|75025386|sp|Q9U281.3|H332_CAEEL (RecName: Full=Histone H3.3 type 2)

HSP 1 Score: 178.718 bits (452), Expect = 9.564e-58
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|48427895|sp|Q8WSF1.3|H33_TRIPS (RecName: Full=Histone H3.3)

HSP 1 Score: 178.718 bits (452), Expect = 1.079e-57
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|75070831|sp|Q5RCC9.3|H33_PONAB (RecName: Full=Histone H3.3)

HSP 1 Score: 178.333 bits (451), Expect = 1.498e-57
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRL REIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLAREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|74967348|sp|Q27532.3|H33L2_CAEEL (RecName: Full=Histone H3.3-like type 2)

HSP 1 Score: 177.178 bits (448), Expect = 3.885e-57
Identity = 85/88 (96.59%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELL+RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+
Sbjct:   49 LREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136

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BLAST of histone -like vs. SwissProt
Match: gi|403399412|sp|A5PK61.1|H3C_BOVIN (RecName: Full=Histone H3.3C)

HSP 1 Score: 176.022 bits (445), Expect = 1.282e-56
Identity = 85/88 (96.59%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRR+QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVT+MP+DIQLARRIRGERA
Sbjct:   49 LREIRRHQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTVMPRDIQLARRIRGERA 136

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BLAST of histone -like vs. SwissProt
Match: gi|21542072|sp|Q9U7D1.1|H3_MASBA (RecName: Full=Histone H3)

HSP 1 Score: 175.637 bits (444), Expect = 1.669e-56
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAI ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   48 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135

[Close]

BLAST of histone -like vs. SwissProt
Match: gi|116248097|sp|Q6NXT2.3|H3C_HUMAN (RecName: Full=Histone H3.3C; AltName: Full=Histone H3.5)

HSP 1 Score: 174.866 bits (442), Expect = 3.752e-56
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDF TDLRFQSAA+GALQEASEAYLVGL EDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   48 LREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135

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BLAST of histone -like vs. nr
Match: gi|701294852|ref|XP_010007566.1| (PREDICTED: histone H3.3, partial [Nestor notabilis])

HSP 1 Score: 182.185 bits (461), Expect = 7.087e-57
Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0

Query:   38 LVRTNPRASFQTLDQWPEPLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            ++ TN  +SF         LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    5 ILNTNCVSSFHVKRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 111

[Close]

BLAST of histone -like vs. nr
Match: gi|505844553|ref|XP_004615767.1| (PREDICTED: histone H3.3 [Sorex araneus])

HSP 1 Score: 180.259 bits (456), Expect = 4.133e-56
Identity = 92/99 (92.93%), Postives = 92/99 (92.93%), Query Frame = 0

Query:   48 QTLDQWPE--PLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
             TLD  P    LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   14 HTLDLQPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 112

[Close]

BLAST of histone -like vs. nr
Match: gi|699623790|ref|XP_009878177.1| (PREDICTED: histone H3.3 [Charadrius vociferus])

HSP 1 Score: 181.03 bits (458), Expect = 4.196e-56
Identity = 97/121 (80.17%), Postives = 99/121 (81.82%), Query Frame = 0

Query:   29 SSFRPMSAGLVRTNPRAS-FQTLDQWPEP----LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            S F   S GL   N   + F  L+    P    LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   23 SIFTEGSPGLTLKNSSLNLFNALEAKGRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 143

[Close]

BLAST of histone -like vs. nr
Match: gi|938059896|gb|KPP62815.1| (histone H3.3-like [Scleropages formosus])

HSP 1 Score: 180.644 bits (457), Expect = 6.747e-56
Identity = 97/126 (76.98%), Postives = 98/126 (77.78%), Query Frame = 0

Query:   23 RSTNQRSSFRPMSAGLV--RTNPRASFQTLDQWPE--PLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            RS  QR   R      +  RT P          P    LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   13 RSVEQRRQCRCGGGAKLEARTGPSGGGDRAQDKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138

[Close]

BLAST of histone -like vs. nr
Match: gi|89269109|emb|CAJ81662.1| (H3 histone [Xenopus tropicalis])

HSP 1 Score: 180.259 bits (456), Expect = 6.759e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of histone -like vs. nr
Match: gi|1108475147|emb|CRK96651.1| (CLUMA_CG009958, isoform A [Clunio marinus])

HSP 1 Score: 179.104 bits (453), Expect = 7.562e-56
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0

Query:   56 PLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
             LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   15 ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 103

[Close]

BLAST of histone -like vs. nr
Match: gi|958799548|ref|XP_014683948.1| (PREDICTED: histone H3.3-like [Equus asinus])

HSP 1 Score: 180.259 bits (456), Expect = 8.695e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

[Close]

BLAST of histone -like vs. nr
Match: gi|724808344|ref|XP_010358086.1| (PREDICTED: histone H3.3-like [Rhinopithecus roxellana] >gi|795157063|ref|XP_011795878.1| PREDICTED: histone H3.3-like [Colobus angolensis palliatus])

HSP 1 Score: 180.259 bits (456), Expect = 8.695e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. nr
Match: gi|693267614|gb|AIS25388.1| (histone H3.3 [Mytilus galloprovincialis])

HSP 1 Score: 180.259 bits (456), Expect = 8.695e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0

Query:   57 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   49 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136

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BLAST of histone -like vs. nr
Match: gi|344248557|gb|EGW04661.1| (Histone H3.3 [Cricetulus griseus])

HSP 1 Score: 179.104 bits (453), Expect = 8.733e-56
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0

Query:   53 WPE--PLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 144
            WP    LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    9 WPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 102

The following BLAST results are available for this feature:

BLAST of histone -like vs. L. salmonis genes
BLAST of histone -like vs. SwissProt
BLAST of histone -like vs. nr

BLAST of histone -like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 12


Match Name	E-value	Identity	Description
EMLSAG00000007016	1.408e-59	100.00	supercontig:LSalAtl2s:LSalAtl2s399:369072:370235:1...	[more]
EMLSAG00000005052	1.613e-57	96.59	supercontig:LSalAtl2s:LSalAtl2s263:50184:50594:1 g...	[more]
EMLSAG00000005193	1.613e-57	96.59	supercontig:LSalAtl2s:LSalAtl2s2742:9871:10281:-1 ...	[more]
EMLSAG00000009977	2.281e-57	100.00	supercontig:LSalAtl2s:LSalAtl2s652:276147:278120:1...	[more]
EMLSAG00000000378	1.465e-41	95.52	supercontig:LSalAtl2s:LSalAtl2s1058:129792:130401:...	[more]
EMLSAG00000001872	5.340e-32	58.06	supercontig:LSalAtl2s:LSalAtl2s1322:13257:13733:-1...	[more]
EMLSAG00000000659	3.372e-28	69.14	supercontig:LSalAtl2s:LSalAtl2s1105:15895:22907:-1...	[more]
EMLSAG00000011182	1.743e-26	97.78	supercontig:LSalAtl2s:LSalAtl2s760:411575:414587:1...	[more]
EMLSAG00000011192	9.752e-26	100.00	supercontig:LSalAtl2s:LSalAtl2s760:431843:433024:1...	[more]
EMLSAG00000005990	1.085e-15	63.46	supercontig:LSalAtl2s:LSalAtl2s323:266828:267898:1...	[more]

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BLAST of histone -like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|55977042\|sp\|P84245.2\|H33_RAT	3.306e-58	100.00	RecName: Full=Histone H3.3 >gi\|55977062\|sp\|P84243....	[more]
gi\|1708108\|sp\|Q10453.2\|H331_CAEEL	3.416e-58	100.00	RecName: Full=Histone H3.3 type 1	[more]
gi\|391358189\|sp\|P02301.3\|H3C_MOUSE	3.729e-58	100.00	RecName: Full=Histone H3.3C; AltName: Full=Embryon...	[more]
gi\|75025386\|sp\|Q9U281.3\|H332_CAEEL	9.564e-58	98.86	RecName: Full=Histone H3.3 type 2	[more]
gi\|48427895\|sp\|Q8WSF1.3\|H33_TRIPS	1.079e-57	98.86	RecName: Full=Histone H3.3	[more]
gi\|75070831\|sp\|Q5RCC9.3\|H33_PONAB	1.498e-57	98.86	RecName: Full=Histone H3.3	[more]
gi\|74967348\|sp\|Q27532.3\|H33L2_CAEEL	3.885e-57	96.59	RecName: Full=Histone H3.3-like type 2	[more]
gi\|403399412\|sp\|A5PK61.1\|H3C_BOVIN	1.282e-56	96.59	RecName: Full=Histone H3.3C	[more]
gi\|21542072\|sp\|Q9U7D1.1\|H3_MASBA	1.669e-56	97.73	RecName: Full=Histone H3	[more]
gi\|116248097\|sp\|Q6NXT2.3\|H3C_HUMAN	3.752e-56	96.59	RecName: Full=Histone H3.3C; AltName: Full=Histone...	[more]

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BLAST of histone -like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|701294852\|ref\|XP_010007566.1\|	7.087e-57	85.98	PREDICTED: histone H3.3, partial [Nestor notabilis...	[more]
gi\|505844553\|ref\|XP_004615767.1\|	4.133e-56	92.93	PREDICTED: histone H3.3 [Sorex araneus]	[more]
gi\|699623790\|ref\|XP_009878177.1\|	4.196e-56	80.17	PREDICTED: histone H3.3 [Charadrius vociferus]	[more]
gi\|938059896\|gb\|KPP62815.1\|	6.747e-56	76.98	histone H3.3-like [Scleropages formosus]	[more]
gi\|89269109\|emb\|CAJ81662.1\|	6.759e-56	100.00	H3 histone [Xenopus tropicalis]	[more]
gi\|1108475147\|emb\|CRK96651.1\|	7.562e-56	98.88	CLUMA_CG009958, isoform A [Clunio marinus]	[more]
gi\|958799548\|ref\|XP_014683948.1\|	8.695e-56	100.00	PREDICTED: histone H3.3-like [Equus asinus]	[more]
gi\|724808344\|ref\|XP_010358086.1\|	8.695e-56	100.00	PREDICTED: histone H3.3-like [Rhinopithecus roxell...	[more]
gi\|693267614\|gb\|AIS25388.1\|	8.695e-56	100.00	histone H3.3 [Mytilus galloprovincialis]	[more]
gi\|344248557\|gb\|EGW04661.1\|	8.733e-56	95.74	Histone H3.3 [Cricetulus griseus]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold98_size375582	supercontig	scaffold98_size375582:215037..217082 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold98_size375582-snap-gene-2.31-mRNA-1	maker-scaffold98_size375582-snap-gene-2.31-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold98_size375582:215037..217082+

gene from alignment at scaffold98_size375582:215037..217082+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold98_size375582-snap-gene-2.31 ID=maker-scaffold98_size375582-snap-gene-2.31|Name=histone -like|organism=Tigriopus kingsejongensis|type=gene|length=2046bp|location=Sequence derived from alignment at scaffold98_size375582:215037..217082+ (Tigriopus kingsejongensis)
ATGTCCCACCCCAATCCCACCGAGGATCGTGTCTCGGTCCCTGGAATGTT
CACTCGCTGTGTTCGACGCTCCACCAATCAGCGCTCGTCCTTTCGCCCAA
TGAGCGCTGGGCTTGTTCGGACCAATCCGCGCGCTTCCTTCCAGACGCTC
GACCAATGGCCAGAGCGTATTTCCTGACGTCACAGCTCACTTCTCTCGTT
GTTCTTCGACAGTTGCACGGGTAAGTACAGCAGCTCCCCCGATTTCGTCA
CCCACCCCCGACCCTGGGCTGTTCCCCCTGTCAAAATTGTGTTCATTCGC
CCCTTCAAACTCCCCTCGAACCCGCCCGGTAGGTGGGCGATCCCGGAACC
GCAGGGGGAGAACCCCATCGACCCGTGAATTTGCCTCCCCCATCTTGGCC
TCTCGGTCGAGAGCGCTAGGCCGGTTGGGCCGAAAGCCCCGCTTGGGCTG
GCTGGGGGGATTGGGCCGAGGGAAAATCACGGCCAGGGTGGAGAGAGCGC
GCGCCCGCTAGCTGCGCGACCAGCGCGCCCGCGTCCCTGGGTCAGCTATA
AAAGCGGCCGTCTCGCAATTGCGGGCGAACAAAGAGATTGACGTTGGACG
TGAAGTGAGCGTGACTTCGGATTGCAGATTCTTTTGTGGAGCTAATTGAC
CGGAAGCAGGATGGCCCGTACCAAGCAAACCGCCCGTAAATCTACCGGAG
GCAAGGCGCCCCGCAAGCAACTGGCCACCAAGGCGGCCCGTAAATCGGCT
CCGTCCACCGGAGGCGTGAAGAAGCCTCATCGCTATCGTCCCGGTACCGT
AGCTCTGCGCGAGATCCGTCGCTACCAGAAGTCCACCGAGCTGCTCATCC
GCAAGCTCCCATTCCAAAGATTGGTCCGTGAGATTGCGCAAGACTTCAAG
ACCGATCTGCGTTTCCAGAGCGCGGCCATCGGCGCCCTTCAGGTAAATGT
CTCGGTTCGTGCAGGACTGAACGTGGTCCGAACCGGTTTGAACTGGATTG
AGTGAAGGCTCCCGAGGGAGAGACCGATGAATTGACTGCGAGGAGGGAAA
AAATCGATTCTGACGTTTTACTATGTTGTCTTGCAGGAGGCTTCCGAGGC
TTACTTGGTGGGTCTGTTCGAGGACACCAACTTGTGCGCCATCCACGCCA
AGCGTGTGACCATCATGCCCAAGGATATCCAGTTGGCTCGCCGAATTCGA
GGCGAGCGAGCCTAAGCTGGCCGAGCGCTGCTTGGGTCGACGTCGATCTC
TTTTACAAACTAATAACTACTACAAGAAAAAACACTTCAACCGTTTCGAT
GTAAATTTCTGTGCCGATCCCACCCTTAGAAGACGATTTGAAGTCGCCCG
ACCGCCGCCAACGGTCCATCCACTCGTGTCTCAGTTTCTCGATCACTCGC
CGCCCATCGGAAGTGGGCGTGATGTTAGTGCAGTGTACGTTATGGCCATT
AATGTAGCTCATGTTCACCGACTCCTCTGGTCATGATGATTACTACCCGG
AATAAATCTCGTGTTTCCCGTGTGTCGACCATCCTCTGGGTGGGAATGTC
TGGCCAGTGTCGGCCGACGAGTGCATCAAGGCGGCTACAGTGTGTGTGTG
CGCAAACCGCGCAATAGGCGGCTGGGGACCAGATTGGACTCGAAGGCTGG
TGGGACGGCCAACTGTATCATAGAATGTTCCGCCCTCTGACTTCTCGTGT
TTAGTTGGACTTGTTCACGTTCATCAAGAAATCGACCGATCTTTTGAAGA
CTGGATCCCGGCGAGCTTTGGGTGGAGGTCGGAGGCGAGGATGGAGATCG
GCGCCGCCAAGGTCAAGCCGGGTGTATGTACAATGTGTTCAGTATTCTAG
ACTTAATTTATGAGAAGCGCCAAGACCAACAATACAACGTCTTGGCTCAA
CTGCTTTAGTTCGAACCACAGCCCCTTAAAACTGTAGCTCACGTTGGATG
GCCGCACCGGCCATCGCCCCTATTCACCGGACTTGGTTACCCCTACACTC
GATAACAAACCGCCACAAAAAAAACTTGTCATGATTCCTCCCCCCC

Synonyms

The feature 'histone -like' has the following synonyms


Synonym
Tk06132

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