choline dehydrogenase, snap_masked-scaffold10103_size2266-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview


Name	choline dehydrogenase
Unique Name	snap_masked-scaffold10103_size2266-processed-gene-0.1
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000000122 (supercontig:LSalAtl2s:LSalAtl2s101:523216:528117:1 gene:EMLSAG00000000122 transcript:EMLSAT00000000122 description:"maker-LSalAtl2s101-snap-gene-5.35")

HSP 1 Score: 245.743 bits (626), Expect = 1.214e-75
Identity = 131/312 (41.99%), Postives = 185/312 (59.29%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRD------WNPW-IHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEP 305
            MDAD IIV      C+          N + LLEAG +D      +  W IH+P      + +   +W Y T P   +NNRS+ WPRG+V GGSSSLN ++Y+RG  +D +RW   G  GW + + LP FK+A+ +E G   + G  GPL VS       +   W+ A Q AGYPF  D NG  QEG+  F++T + G+R STA AYL+PA +R NL     A V +++ +G RA G++Y      L+ +  A E+ILSGG+INSPQLLMLSG+G A+ L++  I + AD++ VG+N+QDHL+  +V +  +P
Sbjct:  259 MDAD-IIVDDVKDYCI---------SNSIFLLEAGPKDTFLGSCYLQWKIHMPAALMYNLCDDKYNWYYNTLPQKHMNNRSMYWPRGRVWGGSSSLNAMVYIRGHAEDQNRWESEGAEGWNYQNCLPYFKKAQTHEWGPSAYRGGNGPLHVSRGTSNNSLHSVWLEAGQQAGYPFTDDVNGYQQEGMSQFEMTIKKGMRNSTASAYLRPALSRPNLTTEVGALVTRILFDGKRAIGIEYLRNGKELKRVY-ADEVILSGGSINSPQLLMLSGVGPAQHLKEMDIPLVADIQGVGQNLQDHLEVYVVQECKKP 559

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BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000005902 (supercontig:LSalAtl2s:LSalAtl2s319:39372:42896:1 gene:EMLSAG00000005902 transcript:EMLSAT00000005902 description:"snap_masked-LSalAtl2s319-processed-gene-0.21")

HSP 1 Score: 208.379 bits (529), Expect = 9.450e-64
Identity = 124/308 (40.26%), Postives = 176/308 (57.14%), Query Frame = 0

Query:    4 DFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVG---YFKTIHNPAVDWCYKTEPD----PGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAE---NNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARN-RSNLRIITHAQVEKVVIEGAR--ATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARL 298
            D+IIVG GSAG VLA+RL+ NP+  ++L+EAGG       H   G   +   +     DW ++TE       G+      WPRGK+LGG++ +N +LYVRG  +D+D W +MG  GWG++ VLP FK++E          + HG  G + VS+     P+   +   AQ AG P   DYN E Q G    QLT RNG R     +Y++P  N R NL+I+T++ V K++ +  +   TGV+   + G    ++A+KEIILS GAI SP +LM SG+G A+ L+D  I +  DL  VG N+QDH+   L
Sbjct:   48 DYIIVGGGSAGSVLASRLTENPQINILLIEAGGHP-----HFLTGIPAFTPYLQLSPYDWSFETEKQDEACKGMIGNRCKWPRGKMLGGTAGMNYMLYVRGNKRDFDEWEEMGFEGWGYEKVLPYFKKSELQLGRYAHDTKHHGTEGNVPVSDSIYITPMAKVYKELAQLAGLPIR-DYNAENQTGFDIPQLTMRNGWRGDPYRSYIEPIMNKRPNLKILTYSHVTKLLFDDNKKIVTGVELL-RFGKTYNVSASKEIILSAGAIGSPTILMHSGVGHAQHLKDLNIPLVKDL-PVGDNLQDHITTML 347

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BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000012767 (supercontig:LSalAtl2s:LSalAtl2s96:160426:167507:-1 gene:EMLSAG00000012767 transcript:EMLSAT00000012767 description:"maker-LSalAtl2s96-snap-gene-1.14")

HSP 1 Score: 204.527 bits (519), Expect = 2.314e-61
Identity = 134/317 (42.27%), Postives = 183/317 (57.73%), Query Frame = 0

Query:    2 DADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDW---------------NPWIHIPVGYFKTI---HNPAVDWCYKTEPDPGLN-----NRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARAT--GVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDH 293
            + DFIIVGAGSAG VLANRL+     +V+LLEAGG +                   I + +G  +++       +DW YKTEP PG       N   +WPRG+V+GGSS LN +LYVRG  +DYD W   GN GW +++VL  FK++E+N            P   +    + P+  A+V      GY  N D NGE Q G    Q T R G RCST+ A+L+P R+R+NL I  +A V KV+I+ +R T  GV+++ ++G +  + A KE+I+S GAINS QLLMLSGIG    LQ+ GI +  DL  +G+N+ DH
Sbjct:   49 EYDFIIVGAGSAGSVLANRLTEISNWRVLLLEAGGDETEISDVPALAXFLQLGKCLIILFIGGTESVVINREGRMDWQYKTEPQPGRACLGHVNGQCNWPRGRVIGGSSVLNYMLYVRGNRKDYDIWANDGNPGWDYNNVLHYFKKSEDNRN----------PYLAAT---KTPLATAFVEGGVEMGYE-NRDCNGEFQTGFMLPQGTIRRGSRCSTSKAFLRPIRHRNNLXIAKNAYVMKVLIDPSRKTAYGVRFR-RNGRVFEVHARKEVIMSAGAINSAQLLMLSGIGPGWHLQNLGIPIIQDL-PIGENLMDH 349

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BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000013076 (supercontig:LSalAtl2s:LSalAtl2s9:868318:874523:1 gene:EMLSAG00000013076 transcript:EMLSAT00000013076 description:"snap_masked-LSalAtl2s9-processed-gene-8.14")

HSP 1 Score: 132.494 bits (332), Expect = 4.346e-37
Identity = 80/255 (31.37%), Postives = 130/255 (50.98%), Query Frame = 0

Query:    8 VGAGSAGCVLANRLSANPRNKVILLEAGGRDWN----PWIHIPVGYFKTIHNPAVDWCYKTEPDP------GLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGAD-----EFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKE 247
            +G G+AG  LA RLS     +++L+E+GG        PW H        ++     W Y +E         G + +   W RG+V+GG+ ++N ++Y+RG   DYD W  +GN GW + DVLP F++ E N +G D     +FHG  GP+ +       P+   ++ A +  GYP + D N   Q G      T ++G R +++ AYL P     NL++  ++ V K++I+  +A G+    K+G +  + A KE
Sbjct:    4 IGGGTAGSTLAGRLSEKKDLRILLVESGGEQSIKLKIPWFH------SLLYGSPHSWHYLSEDQEHNQALLGYDGKKSIWWRGRVIGGTGAINTMIYMRGNRHDYDHWALLGNEGWSFSDVLPFFRKLE-NVKGTDLEKDVQFHGTEGPMKIEYGSQVTPLQKGFLNAGKLLGYPIS-DPNSYNQFGFSKILFTIKDGQRWTSSDAYLHP--ENPNLKVSINSHVLKIIIKHKKAMGIDM-IKNGKIHRIYAKKE 247

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BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000006921 (supercontig:LSalAtl2s:LSalAtl2s391:573638:588537:1 gene:EMLSAG00000006921 transcript:EMLSAT00000006921 description:"maker-LSalAtl2s391-snap-gene-5.42")

HSP 1 Score: 76.2554 bits (186), Expect = 8.116e-16
Identity = 78/292 (26.71%), Postives = 124/292 (42.47%), Query Frame = 0

Query:   16 VLANRLSANPRNKVILLEAGGR-DWNPWIHIPVGYFKTIHNPAVDWCYKTEPDP----GLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGET-QEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQY-KDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVY 300
            VLA RLS      V+L+E G    +  ++ I     + + +P   W Y++EP      G  +R     RGK LGGS   N              +  + N  + +             E   +     G P  +        +T A+++  + A +P    +N ET  +G+         G R S   AYLKP  NR NL ++ + +V K+  +      +     K G    L   K++IL+GGAIN+P+LL  SG+G  +Q+    + +  D+  VG  +QDHL   L +
Sbjct:   28 VLAARLSEXKNYHVLLIEKGDEASYASYVPI-FAPLQGLFDPT--WEYESEPQRNSHYGYKDRISKITRGKSLGGSGHYN--------------YHIISNETFEY-----------CTESIRNRVRSKGSPYHI--------LTQAFLS--EEARFP---GWNFETILQGI-------YKGKRFSNFDAYLKPVLNRKNLHVLINTEVIKIDFKDKSPESLHITHQKEGKTIKLNKIKKLILAGGAINTPKLLFESGVGPKDQINKLNVTLVEDI-PVGNELQDHLTCPLYF 270

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558889|sp|Q9WWW2.1|ALKJ_PSEPU (RecName: Full=Alcohol dehydrogenase [acceptor])

HSP 1 Score: 297.36 bits (760), Expect = 3.529e-96
Identity = 150/298 (50.34%), Postives = 200/298 (67.11%), Query Frame = 0

Query:    4 DFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNER-GADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTA-AKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLV 299
            D+IIVGAGSAGCVLANRLSA+P  +V LLEAG RD NP IH+P+G     ++  ++W ++T P   LN RSL WPRGK LGGSSS+N ++Y+RG  +DY  W Q G   WGW     LFK+ E+N+R     +HG  G L+VS+++   P++ ++V A   A   FN D+NG  QEGVGF+Q+T ++G R S+A A+L    +R NL IIT A   KV+ E  +A GV Y  K+   Q  T  + E+ILS GA+N+PQLLMLSG+G A +L++HGIA+  DL  VGKN+QDHL   L+
Sbjct:    3 DYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAFALFKKLEHNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFEDRKAVGVSYIQKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLDITLM 300

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|75499879|sp|Q47944.1|SDH_GLUOY (RecName: Full=L-sorbose 1-dehydrogenase; Short=SDH)

HSP 1 Score: 295.434 bits (755), Expect = 1.277e-95
Identity = 146/296 (49.32%), Postives = 195/296 (65.88%), Query Frame = 0

Query:    4 DFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLV 299
            D+I+VG GSAGCVLA RLS NP  +V L+EAG RD +P IH+PVG+ K    P   W   TEP    NNR + + +G++LGG SS+N  ++ RG P D+DRW   G  GW + DV   F R+E N   +  +HG  GPL VSN+    P + A+V + Q  G P+NPD+NG +QEG G +Q+T RN  RCSTAV YL+PA  R NL ++T A V K+V  G RATGVQY   +GTL T  A++EI+++ GAI +P+L+MLSG+G A  L+++GI V  DL  VG+N+QDH    +V
Sbjct:    6 DYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHT-WDLLTEPQKHANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQKYFIRSEGNAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFNGTRATGVQYI-ANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDHFGVDIV 299

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|416604|sp|Q00593.1|ALKJ_PSEOL (RecName: Full=Alcohol dehydrogenase [acceptor])

HSP 1 Score: 291.197 bits (744), Expect = 1.258e-93
Identity = 148/298 (49.66%), Postives = 197/298 (66.11%), Query Frame = 0

Query:    4 DFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNER-GADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQT-LTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLV 299
            D+IIVGAGSAGCVLANRLSA+P  +V LLEAG RD NP IH+P+G     ++  ++W ++T P   LN RSL WPRGK LGGSSS+N ++Y+RG   DY  W Q     WGW   L LFKR E N+R    E HG  G L+VS+++   P++ A+V A   A   FN D+NGE Q+GVGF+Q+T +NG R S+A A+L    +R NL IIT A   K++ E  +A GV Y  K+   Q   T+  E++LS GA+ +P LLMLSG+G A +L++HG+++  DL  VGKN+QDHL   L+
Sbjct:    3 DYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQQNLNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRALELFKRLECNQRFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGEYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDRKAVGVSYIKKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQDHLDITLM 300

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|81885843|sp|Q6UPE0.1|CHDH_RAT (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor)

HSP 1 Score: 287.345 bits (734), Expect = 8.353e-92
Identity = 147/310 (47.42%), Postives = 197/310 (63.55%), Query Frame = 0

Query:    5 FIIVGAGSAGCVLANRLSANPRNKVILLEAGGRD---------WNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEP 305
            FI+VGAGSAGCVLANRL+ +P ++V+LLEAG +D         W   IH+P      + +   +W Y TE  PGL+ R L WPRG+V GGSSSLN ++Y+RG  +DY+RW + G  GW +   LP F++A+ +E GA+ + G  GPL VS  +   P+  A++ AA+ AGYPF  D NG  QEG G+  +T   G R STA AYL+PA +R NLR      V +V+ EG RA GV+Y  K G       ++E+ILSGGAINSPQLLMLSG+G A+ L+  GI V   L  VG+N+QDHL+  + +   +P
Sbjct:   48 FIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWK--IHMPAALVANLCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFEGTRAVGVEYI-KDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQP 354

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558900|sp|Q8BJ64.1|CHDH_MOUSE (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor)

HSP 1 Score: 282.722 bits (722), Expect = 5.894e-90
Identity = 143/310 (46.13%), Postives = 195/310 (62.90%), Query Frame = 0

Query:    5 FIIVGAGSAGCVLANRLSANPRNKVILLEAGGRD---------WNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEP 305
            F++VGAGSAGCVLA+RL+ +P ++V+LLEAG +D         W   IH+P      + +   +W Y TEP PG+++R L WPRG+V GGSSSLN ++Y+RG  +DY+RW + G  GW +   LP F++A+ +E GA+ + G  GPL VS  +   P+  A++ AA+ AGYPF  D NG  QEG G+  +T   G R STA AYL P  +R NLR      V +V+ EG RA GV+Y  K G       ++E+ILSGGAINSPQLLMLSG+G A+ L+   I V   L  VG+N+QDHL+  +     +P
Sbjct:   45 FVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWK--IHMPAALVSNLCDDKYNWYYHTEPQPGMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFEGTRAVGVEYI-KDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQP 351

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|254810404|sp|C3MIE4.1|BETA_RHISN (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH)

HSP 1 Score: 278.1 bits (710), Expect = 9.548e-89
Identity = 142/306 (46.41%), Postives = 196/306 (64.05%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPT 306
            M AD+II+G+GSAG  LA+RLS + RN VI+LE GG D  P+I +P      +     +W Y +EP+P LNNR +  PRGKV+GGSSS+NG++YVRG  +D+DRW Q+G  GW + DVLP FKR E++  G D + G  GPL V    ++ P+  A+V A + AG+    DYNG  QEG G  + T   G R S A AYLKPA  R N+++I      K+VIE  RATGV+  ++ G ++ + A +E+I+S  + NSP+LLMLSGIG A  L+D GI V+ D   VG+N+QDH++      + +P 
Sbjct:    1 MQADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWGYLSEPEPHLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVLPYFKRMEHSHGGEDGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNGSKQEGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQLI-RCFARKIVIENGRATGVEI-ERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDHMEFYFQQISTKPV 304

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|229462828|sp|Q8NE62.2|CHDH_HUMAN (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor)

HSP 1 Score: 279.256 bits (713), Expect = 1.366e-88
Identity = 144/303 (47.52%), Postives = 191/303 (63.04%), Query Frame = 0

Query:    2 DADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRD---------WNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQ 295
            +  +++VGAGSAGCVLA RL+ +P  +V+LLEAG +D         W   IH+P      + +   +WCY TE   GL+ R L WPRG+V GGSSSLN ++YVRG  +DY+RW++ G  GW +   LP F++A+ +E GA  + G  GPL VS  +   P+  A++ A Q AGYP   D NG  QEG G+  +T   G R S A AYL PA +R+NL+      V +V+ EG RA GV+Y  K+G      A+KE+ILSGGAINSPQLLMLSGIG A+ L+  GI V   L  VG+N+QDHL+
Sbjct:   40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWK--IHMPAALVANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVEYV-KNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLE 339

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|122056600|sp|Q1MJU4.1|BETA_RHIL3 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH)

HSP 1 Score: 276.174 bits (705), Expect = 6.189e-88
Identity = 138/306 (45.10%), Postives = 197/306 (64.38%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPT 306
            M ADF+I+G+GSAG  LA RLS   +N VI++EAGG D+ P+I +P      +     +W Y +EP+  LNNR +  PRGKV+GGSSS+NG++YVRG  +D++RW ++G  GW + DVLP FKR E++  G + + G  GPL V       P+  A+V A + AG+    DYNG  QEG G  + T   G R S A AYLKPA  R N++I+ +   +++VIE  RATGV+  +++G ++ + A +E+I+S  + NSP+LLMLSGIG  + LQD GIAV+AD   VG N+QDH++      + +P 
Sbjct:    1 MQADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQEGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKIV-YGLAQRIVIEDGRATGVEI-ERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDHMEFYFQQVSTKPV 304

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BLAST of choline dehydrogenase vs. SwissProt
Match: gi|226698893|sp|B5ZUG2.1|BETA_RHILW (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH)

HSP 1 Score: 274.633 bits (701), Expect = 2.609e-87
Identity = 137/306 (44.77%), Postives = 197/306 (64.38%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPT 306
            M ADF+I+G+GSAG  LA RLS + +N V+++EAGG D+ P+I +P      +     +W Y +EP+P LNNR +  PRGKV+GGSSS+NG++YVRG  +D++RW ++G  GW + DVLP FKR E++  G + + G  GPL V       P+  A+V A + AG+    DYNG  QEG G  + T  +G R S A AYLKPA  R N+ II +   +++VIE  RATGV+  ++ G ++ + A +E+I+S  + NSP+LLMLSGIG  E L++ GI V+AD   VG N+QDH++      + +P 
Sbjct:    1 MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEII-YGFAQRIVIEDGRATGVEI-ERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDHMEFYFQQVSTKPV 304

[Close]

BLAST of choline dehydrogenase vs. SwissProt
Match: gi|166224135|sp|A6X2G7.1|BETA_OCHA4 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH)

HSP 1 Score: 273.863 bits (699), Expect = 4.512e-87
Identity = 140/305 (45.90%), Postives = 193/305 (63.28%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEP 305
            M+ADF+I+G+GSAG  +A RLS + R  VI++E G  D  P I +P      ++    DW + TEP+P +  RSL  PRGKVLGGSSS+NG++YVRG  +DYD W + G  GW + DVLP FKR EN+  G + + G  GPL +   +   P+  A+V A   AG+    DYNGE QEG G  + T  NG R S A AYLKPA  R N++++      K+V+EG RA GV+  +   +  T+ A +E+I++  +INSP+LLMLSGIG A QL++HGI V AD   VG+N+QDHL+  +  +  +P
Sbjct:    1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADVLPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVK-GLARKIVLEGKRAVGVEI-EAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDHLEVYIQQECTQP 303

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|640635825|ref|WP_025063816.1| (choline dehydrogenase [Sulfitobacter guttiformis] >gi|751953369|gb|KIN74282.1| Alcohol dehydrogenase [Sulfitobacter guttiformis KCTC 32187])

HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0
Identity = 276/310 (89.03%), Postives = 291/310 (93.87%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+ DFIIVGAGSAGCVLANRLSANPRNKV+LLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTE DPGLNNR LDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGN GWGWDDVLPLFKRAE NERGADE+HGD GPLSVS+MRIQRPITDAWVAAAQAAGY FNPDYNG  QEGVGFFQLTARNG RCSTAVAYL PAR R NL IITHAQVE+V+++G+RATGVQYKDKSG LQ+L AAKEIILSGG+INSPQLLMLSGIGE EQL++HGI V+ADLK VGKN+QDHLQARLVYKTHEPTLNDE
Sbjct:    1 MNTDFIIVGAGSAGCVLANRLSANPRNKVVLLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEADPGLNNRRLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNAGWGWDDVLPLFKRAETNERGADEYHGDQGPLSVSDMRIQRPITDAWVAAAQAAGYKFNPDYNGAKQEGVGFFQLTARNGRRCSTAVAYLNPARKRPNLTIITHAQVERVLLDGSRATGVQYKDKSGILQSLLAAKEIILSGGSINSPQLLMLSGIGEVEQLREHGIEVKADLKGVGKNLQDHLQARLVYKTHEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|640631162|ref|WP_025059162.1| (choline dehydrogenase [Sulfitobacter donghicola] >gi|659499720|gb|KEJ90780.1| choline dehydrogenase [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565] >gi|751947091|gb|KIN68039.1| Alcohol dehydrogenase [Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565])

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 275/310 (88.71%), Postives = 287/310 (92.58%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            MDADFI+VGAGSAGCVLANRLSANPRNKV+LLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLN RSL+WPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGN GWGWDDVLPLFKRAE NERGADEFHGD GPLSVS+MR+QRPITDAWVAAAQAAGY FNPDYNG  QEGVGFFQLTARNG RCS AVAYL PAR R NL IITHAQVEK+V+EG RA  VQYKDKSG + T+ A KEIILSGG INSPQLLMLSGIGEAEQLQ+HGI V+ADLK VGKNMQDHLQARLVYKTHEPTLN+E
Sbjct:    1 MDADFIVVGAGSAGCVLANRLSANPRNKVVLLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNGRSLEWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNAGWGWDDVLPLFKRAEKNERGADEFHGDQGPLSVSDMRVQRPITDAWVAAAQAAGYHFNPDYNGADQEGVGFFQLTARNGRRCSAAVAYLNPARQRGNLEIITHAQVEKIVLEGQRAVAVQYKDKSGAVHTVRAGKEIILSGGTINSPQLLMLSGIGEAEQLQEHGIDVKADLKGVGKNMQDHLQARLVYKTHEPTLNNE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|496451260|ref|WP_009160105.1| (choline dehydrogenase [Thalassobium sp. R2A62] >gi|255106373|gb|EET49047.1| alcohol dehydrogenase [Thalassobium sp. R2A62])

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 259/310 (83.55%), Postives = 285/310 (91.94%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+AD+I++GAGSAGCVLANRLSA+P+ KVILLEAGG+DWNPWIHIPVGYFKTIHNP+VDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRW Q+GN GWGWDDVLPLFKRAENNERGADEFHGD GPLSVSNMRIQRPITDAWVAAAQ  GYPFNPDYNG  QEGVGFFQLTARNG RCS+AVAYL P ++R NL IITHAQVEK+VI+   ATGV+YKD+SG ++T+ A +EIILSGGAINSPQLLMLSGIGEA QLQ+HGIAV+ DL+ VGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    1 MEADYIVIGAGSAGCVLANRLSADPKTKVILLEAGGKDWNPWIHIPVGYFKTIHNPSVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQSQDYDRWAQIGNRGWGWDDVLPLFKRAENNERGADEFHGDEGPLSVSNMRIQRPITDAWVAAAQVEGYPFNPDYNGADQEGVGFFQLTARNGRRCSSAVAYLNPIKSRENLTIITHAQVEKIVIKDKSATGVEYKDRSGAVRTINAGREIILSGGAINSPQLLMLSGIGEAAQLQEHGIAVEQDLRGVGKNMQDHLQARLVYKCNEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|959686699|ref|WP_058123218.1| (choline dehydrogenase [Thalassobacter stenotrophicus] >gi|950306150|emb|CUH60180.1| Alcohol dehydrogenase [acceptor] [Thalassobacter stenotrophicus] >gi|1109951354|emb|SHI69562.1| choline dehydrogenase [Thalassobacter stenotrophicus DSM 16310])

HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0
Identity = 255/310 (82.26%), Postives = 279/310 (90.00%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+AD+++VGAGSAGCV+ANRLSANP+N+VILLEAGGRD NPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRW QMGN GW WDDVLPLFKRAE+NERGADEFHG  GPLSVSNMRI+RPITDAWV AAQAAGYPFNPDYNG +QEGVGFFQLTARNG RCS AVAYL PAR R NLRI+THAQV++V +E  R TGV+Y D+ G +  + AA+E+ILSGGAINSPQLLMLSGIGEA QL +HGI VQADL  VGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    1 MEADYVVVGAGSAGCVVANRLSANPKNRVILLEAGGRDLNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQAQDYDRWAQMGNKGWSWDDVLPLFKRAESNERGADEFHGSDGPLSVSNMRIERPITDAWVKAAQAAGYPFNPDYNGASQEGVGFFQLTARNGRRCSAAVAYLNPARKRPNLRIVTHAQVDRVTLENGRCTGVEYTDRGGVVHHVKAAREVILSGGAINSPQLLMLSGIGEAAQLAEHGIEVQADLPGVGKNMQDHLQARLVYKCNEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|740162804|ref|WP_038006312.1| (MULTISPECIES: choline dehydrogenase [Thalassobacter] >gi|695756261|gb|KGK80263.1| choline dehydrogenase [Thalassobacter stenotrophicus] >gi|695955457|gb|KGL01107.1| choline dehydrogenase [Thalassobacter sp. 16PALIMAR09])

HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0
Identity = 255/310 (82.26%), Postives = 279/310 (90.00%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+AD+++VGAGSAGCV+ANRLSANP+N+VILLEAGGRD NPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRW QMGN GW WDDVLPLFKRAE+NERGADEFHG  GPLSVSNMRI+RPITDAWV AAQAAGYPFNPDYNG +QEGVGFFQLTARNG RCS AVAYL PAR R NLRI+THAQV++V +E  R TGV+Y D+ G +  + AA+E+ILSGGAINSPQLLMLSGIGEA QL +HGI VQADL  VGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    1 MEADYVVVGAGSAGCVVANRLSANPKNRVILLEAGGRDLNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQAQDYDRWAQMGNKGWSWDDVLPLFKRAESNERGADEFHGSDGPLSVSNMRIERPITDAWVKAAQAAGYPFNPDYNGASQEGVGFFQLTARNGRRCSAAVAYLNPARKRPNLRIVTHAQVDRVTLEDGRCTGVEYTDRGGVVHHVKAAREVILSGGAINSPQLLMLSGIGEAAQLAEHGIEVQADLPGVGKNMQDHLQARLVYKCNEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|1221907711|ref|WP_089992147.1| (choline dehydrogenase [Loktanella koreensis] >gi|1094442072|emb|SEW18467.1| choline dehydrogenase [Loktanella koreensis])

HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0
Identity = 256/310 (82.58%), Postives = 279/310 (90.00%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M AD++IVGAGSAGCVLANRLS +PRNKVILLEAGGRD NPWIHIPVGYFKTIHNP VDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRWRQMGN GWGWDDVLPLFKRAE NERGADE+HGD GPLSVSNMRIQRPITDAWVAAAQ+AGY FNPDYNG  QEGVGFFQLT RNG RCS AVAYL PA++R NLR++THAQVE++VIEG RAT V YKD++G  QT+TA +EIIL GG+INSPQLLMLSGIGE + L++HGI V ADL  VGKN+QDHLQARLVYK +EPTLNDE
Sbjct:    1 MQADYVIVGAGSAGCVLANRLSKDPRNKVILLEAGGRDLNPWIHIPVGYFKTIHNPKVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQKQDYDRWRQMGNAGWGWDDVLPLFKRAERNERGADEYHGDQGPLSVSNMRIQRPITDAWVAAAQSAGYKFNPDYNGVDQEGVGFFQLTTRNGRRCSAAVAYLNPAKSRENLRVLTHAQVERIVIEGKRATAVTYKDRAGRRQTVTANREIILCGGSINSPQLLMLSGIGEPDHLREHGITVIADLNGVGKNLQDHLQARLVYKCNEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|1119711455|ref|WP_072629335.1| (choline dehydrogenase [Planktotalea frisia] >gi|1111708403|gb|OJI95129.1| alcohol dehydrogenase [Planktotalea frisia])

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 250/310 (80.65%), Postives = 278/310 (89.68%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+ADFI+VGAGSAGCVLANRLSA+P+NKVILLEAGG+D NPWIHIPVGYFKTIHNP VDWCYKTEPD GLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRWRQMGNVGWGW+DVLPLFKR+E NERGADEFH D G LSVSNMRI+RPITDAWV AAQAAGY FNPDYNG  QEGVGFFQLTA+NGLRCS+A A+L+PA++R NL IITHA  + ++ EG RATG++YKD+SG  Q ++A KEI++SGGAINSPQLLMLSGIG+ EQL +HGI V A LK VGKNMQDHLQARLVYK HEPTLNDE
Sbjct:    1 MEADFIVVGAGSAGCVLANRLSADPKNKVILLEAGGKDSNPWIHIPVGYFKTIHNPKVDWCYKTEPDEGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQAQDYDRWRQMGNVGWGWEDVLPLFKRSERNERGADEFHNDQGELSVSNMRIERPITDAWVEAAQAAGYKFNPDYNGADQEGVGFFQLTAKNGLRCSSAAAFLRPAKSRENLTIITHALAQNIIFEGKRATGIRYKDRSGKDQIVSARKEIVISGGAINSPQLLMLSGIGDPEQLAEHGIEVVAPLKGVGKNMQDHLQARLVYKCHEPTLNDE 310

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|942094247|ref|WP_055296158.1| (choline dehydrogenase [Loktanella sp. 1ANDIMAR09] >gi|941330222|gb|KQB95894.1| choline dehydrogenase [Loktanella sp. 1ANDIMAR09])

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 262/310 (84.52%), Postives = 283/310 (91.29%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            ++ADFI+VGAGSAGCVLANRLSANP +KVILLEAGGRD NPWIHIPVGYFKTIHNP VDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGN GWGWDDVLPLFKRAE NERGADE+HGD GPLSVSNMRIQRPITDAWVAAAQAAGY FNPDYNG  QEGVGFFQLT+RNG RCS AVAYL P ++R NL+IITHAQVEKV+IEG RATGV Y D+SGT+QT+ A KEI+LSGGAINSPQ+LMLSGIGEA QL ++GI V+ DL  VGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    6 VEADFIVVGAGSAGCVLANRLSANPAHKVILLEAGGRDLNPWIHIPVGYFKTIHNPKVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNAGWGWDDVLPLFKRAEKNERGADEYHGDQGPLSVSNMRIQRPITDAWVAAAQAAGYKFNPDYNGAEQEGVGFFQLTSRNGRRCSAAVAYLNPVKSRENLQIITHAQVEKVIIEGRRATGVTYTDRSGTVQTIKARKEIVLSGGAINSPQILMLSGIGEAAQLGENGITVEHDLPGVGKNMQDHLQARLVYKCNEPTLNDE 315

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|1189854187|ref|WP_085863562.1| (choline dehydrogenase [Pseudooctadecabacter jejudonensis] >gi|1187967905|emb|SLN26769.1| Alcohol dehydrogenase [acceptor] [Pseudooctadecabacter jejudonensis])

HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0
Identity = 249/310 (80.32%), Postives = 279/310 (90.00%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            ++ADF++VGAGSAGCV+ANRLSA+P+NKVILLEAGGRD NPWIHIPVGYFKTIHNP+VDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQ QDYDRWRQMGN GWGWDDVLPLFKRAENNERGAD +HGD GPLSVSNMRIQRPITDAWVAAAQ+AGY FNPDYNG  QEGVGFFQLT+RNG RCS AVAYL P ++R NL+I+THAQ +K+V+EG RATGV Y D+SG    +TA +E+++SGGAINSPQLLMLSGIG  ++L + GI V ADL AVGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    4 LEADFVVVGAGSAGCVVANRLSADPKNKVILLEAGGRDLNPWIHIPVGYFKTIHNPSVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQSQDYDRWRQMGNKGWGWDDVLPLFKRAENNERGADAYHGDQGPLSVSNMRIQRPITDAWVAAAQSAGYKFNPDYNGVDQEGVGFFQLTSRNGRRCSAAVAYLNPVKSRENLQIVTHAQADKIVVEGKRATGVIYTDRSGKQVKVTARREVVVSGGAINSPQLLMLSGIGAGDELAEQGIDVVADLPAVGKNMQDHLQARLVYKCNEPTLNDE 313

[Close]

BLAST of choline dehydrogenase vs. nr
Match: gi|1133994461|emb|SIT91440.1| (choline dehydrogenase [Loktanella rosea])

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 263/310 (84.84%), Postives = 282/310 (90.97%), Query Frame = 0

Query:    1 MDADFIIVGAGSAGCVLANRLSANPRNKVILLEAGGRDWNPWIHIPVGYFKTIHNPAVDWCYKTEPDPGLNNRSLDWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNVGWGWDDVLPLFKRAENNERGADEFHGDGGPLSVSNMRIQRPITDAWVAAAQAAGYPFNPDYNGETQEGVGFFQLTARNGLRCSTAVAYLKPARNRSNLRIITHAQVEKVVIEGARATGVQYKDKSGTLQTLTAAKEIILSGGAINSPQLLMLSGIGEAEQLQDHGIAVQADLKAVGKNMQDHLQARLVYKTHEPTLNDE 310
            M+ADFI+VGAGSAGCVLANRLSANP +KVILLEAGGRD NPWIHIPVGYFKTIHNP VDWCYKTEPDPGLN RS++WPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGN GWGWDDVLPLFKRAE NERGADE+HGD GPLSVSNMRIQRPITDAWVAAAQAAGY FNPDYNG  QEGVGFFQLT+RNG RCS AVAYL P ++R NL+IITHAQVEKV+IEG RATGV Y D+SGT+QT+ A KEI+LSGGAINSPQ+LMLSGIGEA QL ++GI V  DL  VGKNMQDHLQARLVYK +EPTLNDE
Sbjct:    1 MEADFIVVGAGSAGCVLANRLSANPAHKVILLEAGGRDLNPWIHIPVGYFKTIHNPKVDWCYKTEPDPGLNGRSIEWPRGKVLGGSSSLNGLLYVRGQPQDYDRWRQMGNAGWGWDDVLPLFKRAEKNERGADEYHGDQGPLSVSNMRIQRPITDAWVAAAQAAGYKFNPDYNGAEQEGVGFFQLTSRNGRRCSAAVAYLNPVKSRENLQIITHAQVEKVIIEGRRATGVTYTDRSGTVQTIKARKEIVLSGGAINSPQILMLSGIGEAAQLGENGINVVHDLPGVGKNMQDHLQARLVYKCNEPTLNDE 310

The following BLAST results are available for this feature:

BLAST of choline dehydrogenase vs. L. salmonis genes
BLAST of choline dehydrogenase vs. SwissProt
BLAST of choline dehydrogenase vs. nr

BLAST of choline dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAG00000000122	1.214e-75	41.99	supercontig:LSalAtl2s:LSalAtl2s101:523216:528117:1...	[more]
EMLSAG00000005902	9.450e-64	40.26	supercontig:LSalAtl2s:LSalAtl2s319:39372:42896:1 g...	[more]
EMLSAG00000012767	2.314e-61	42.27	supercontig:LSalAtl2s:LSalAtl2s96:160426:167507:-1...	[more]
EMLSAG00000013076	4.346e-37	31.37	supercontig:LSalAtl2s:LSalAtl2s9:868318:874523:1 g...	[more]
EMLSAG00000006921	8.116e-16	26.71	supercontig:LSalAtl2s:LSalAtl2s391:573638:588537:1...	[more]

BLAST of choline dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|42558889\|sp\|Q9WWW2.1\|ALKJ_PSEPU	3.529e-96	50.34	RecName: Full=Alcohol dehydrogenase [acceptor]	[more]
gi\|75499879\|sp\|Q47944.1\|SDH_GLUOY	1.277e-95	49.32	RecName: Full=L-sorbose 1-dehydrogenase; Short=SDH	[more]
gi\|416604\|sp\|Q00593.1\|ALKJ_PSEOL	1.258e-93	49.66	RecName: Full=Alcohol dehydrogenase [acceptor]	[more]
gi\|81885843\|sp\|Q6UPE0.1\|CHDH_RAT	8.353e-92	47.42	RecName: Full=Choline dehydrogenase, mitochondrial...	[more]
gi\|42558900\|sp\|Q8BJ64.1\|CHDH_MOUSE	5.894e-90	46.13	RecName: Full=Choline dehydrogenase, mitochondrial...	[more]
gi\|254810404\|sp\|C3MIE4.1\|BETA_RHISN	9.548e-89	46.41	RecName: Full=Oxygen-dependent choline dehydrogena...	[more]
gi\|229462828\|sp\|Q8NE62.2\|CHDH_HUMAN	1.366e-88	47.52	RecName: Full=Choline dehydrogenase, mitochondrial...	[more]
gi\|122056600\|sp\|Q1MJU4.1\|BETA_RHIL3	6.189e-88	45.10	RecName: Full=Oxygen-dependent choline dehydrogena...	[more]
gi\|226698893\|sp\|B5ZUG2.1\|BETA_RHILW	2.609e-87	44.77	RecName: Full=Oxygen-dependent choline dehydrogena...	[more]
gi\|166224135\|sp\|A6X2G7.1\|BETA_OCHA4	4.512e-87	45.90	RecName: Full=Oxygen-dependent choline dehydrogena...	[more]

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BLAST of choline dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|640635825\|ref\|WP_025063816.1\|	0.000e+0	89.03	choline dehydrogenase [Sulfitobacter guttiformis] ...	[more]
gi\|640631162\|ref\|WP_025059162.1\|	0.000e+0	88.71	choline dehydrogenase [Sulfitobacter donghicola] >...	[more]
gi\|496451260\|ref\|WP_009160105.1\|	0.000e+0	83.55	choline dehydrogenase [Thalassobium sp. R2A62] >gi...	[more]
gi\|959686699\|ref\|WP_058123218.1\|	0.000e+0	82.26	choline dehydrogenase [Thalassobacter stenotrophic...	[more]
gi\|740162804\|ref\|WP_038006312.1\|	0.000e+0	82.26	MULTISPECIES: choline dehydrogenase [Thalassobacte...	[more]
gi\|1221907711\|ref\|WP_089992147.1\|	0.000e+0	82.58	choline dehydrogenase [Loktanella koreensis] >gi\|1...	[more]
gi\|1119711455\|ref\|WP_072629335.1\|	0.000e+0	80.65	choline dehydrogenase [Planktotalea frisia] >gi\|11...	[more]
gi\|942094247\|ref\|WP_055296158.1\|	0.000e+0	84.52	choline dehydrogenase [Loktanella sp. 1ANDIMAR09] ...	[more]
gi\|1189854187\|ref\|WP_085863562.1\|	0.000e+0	80.32	choline dehydrogenase [Pseudooctadecabacter jejudo...	[more]
gi\|1133994461\|emb\|SIT91440.1\|	0.000e+0	84.84	choline dehydrogenase [Loktanella rosea]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold10103_size2266	supercontig	scaffold10103_size2266:12..941 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold10103_size2266-processed-gene-0.1-mRNA-1	snap_masked-scaffold10103_size2266-processed-gene-0.1-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold10103_size2266:12..941-

gene from alignment at scaffold10103_size2266:12..941-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold10103_size2266-processed-gene-0.1 ID=snap_masked-scaffold10103_size2266-processed-gene-0.1|Name=choline dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=930bp|location=Sequence derived from alignment at scaffold10103_size2266:12..941- (Tigriopus kingsejongensis)
ATGGATGCAGATTTTATCATTGTTGGCGCAGGCTCGGCTGGCTGCGTTCT
GGCCAACAGGCTCAGCGCCAATCCACGCAACAAAGTGATTCTGCTGGAAG
CAGGCGGGCGGGACTGGAATCCGTGGATTCATATTCCGGTCGGATACTTC
AAAACCATCCATAATCCCGCCGTCGACTGGTGCTACAAGACCGAACCCGA
TCCGGGACTGAACAACCGCTCGCTCGACTGGCCGCGCGGCAAAGTTCTGG
GCGGATCTTCCTCACTGAACGGTCTGCTCTACGTGCGCGGACAGCCACAG
GACTATGACCGTTGGCGGCAGATGGGCAATGTCGGCTGGGGCTGGGATGA
CGTGCTACCCCTGTTCAAACGCGCCGAAAATAACGAACGCGGTGCAGATG
AATTTCACGGTGACGGAGGGCCATTATCAGTCTCTAACATGCGTATTCAA
CGCCCCATCACCGATGCATGGGTCGCTGCGGCGCAGGCGGCTGGCTATCC
GTTCAACCCCGATTACAACGGCGAAACCCAAGAGGGTGTCGGATTCTTCC
AGCTGACCGCACGCAACGGGCTGCGGTGCTCCACAGCGGTGGCTTACCTC
AAGCCCGCCCGCAACCGCAGCAACCTTCGGATCATCACCCATGCGCAGGT
TGAAAAGGTCGTGATCGAGGGCGCGCGCGCAACCGGCGTGCAGTACAAAG
ACAAATCCGGCACGCTGCAGACCCTGACGGCGGCCAAGGAAATCATCCTT
TCGGGCGGTGCTATCAACTCTCCACAACTGTTGATGTTGTCCGGCATAGG
CGAGGCGGAACAGCTTCAGGATCACGGGATCGCCGTGCAGGCCGACCTGA
AAGCTGTGGGCAAAAACATGCAAGACCACCTGCAGGCGCGGCTGGTCTAC
AAGACCCATGAACCGACACTGAATGACGAA

Synonyms

The feature 'choline dehydrogenase' has the following synonyms


Synonym
Tk07324

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